Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35408.t1 | XP_003596817.1 | 94.7 | 374 | 18 | 2 | 1 | 373 | 17 | 389 | 1.80E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35408.t1 | Q9SQQ9 | 52.5 | 396 | 146 | 12 | 1 | 373 | 18 | 394 | 3.2e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35408.t1 | G7ITS9 | 94.7 | 374 | 18 | 2 | 1 | 373 | 17 | 389 | 1.3e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene35408.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene35408 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene35408 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene049230 | MS.gene35408 | 0.802876 | 4.56E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene35408 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene35408 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene35408 | 0.853853 | 1.82E-61 | -1.69E-46 |
| MS.gene049404 | MS.gene35408 | 0.80864 | 2.80E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene35408 | 0.835338 | 1.78E-56 | -1.69E-46 |
| MS.gene049501 | MS.gene35408 | 0.820043 | 8.45E-53 | -1.69E-46 |
| MS.gene049647 | MS.gene35408 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene35408 | 0.823382 | 1.43E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene35408 | 0.84259 | 2.36E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene35408 | 0.84037 | 9.06E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene35408 | 0.842884 | 1.97E-58 | -1.69E-46 |
| MS.gene050442 | MS.gene35408 | 0.880832 | 3.97E-70 | -1.69E-46 |
| MS.gene050680 | MS.gene35408 | 0.849028 | 4.21E-60 | -1.69E-46 |
| MS.gene050719 | MS.gene35408 | 0.823002 | 1.75E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene35408 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene35408 | 0.824127 | 9.55E-54 | -1.69E-46 |
| MS.gene050750 | MS.gene35408 | 0.852201 | 5.39E-61 | -1.69E-46 |
| MS.gene050780 | MS.gene35408 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene35408 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene35408 | 0.817092 | 3.95E-52 | -1.69E-46 |
| MS.gene050820 | MS.gene35408 | 0.852198 | 5.40E-61 | -1.69E-46 |
| MS.gene050826 | MS.gene35408 | 0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene35408 | 0.844833 | 5.92E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene35408 | 0.846319 | 2.34E-59 | -1.69E-46 |
| MS.gene051210 | MS.gene35408 | 0.803018 | 4.26E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene35408 | 0.820229 | 7.66E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene35408 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene35408 | 0.822835 | 1.92E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene35408 | 0.82549 | 4.56E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene35408 | 0.803403 | 3.54E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene35408 | 0.810331 | 1.22E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene35408 | 0.825576 | 4.35E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene35408 | 0.837946 | 3.85E-57 | -1.69E-46 |
| MS.gene052333 | MS.gene35408 | 0.856645 | 2.80E-62 | -1.69E-46 |
| MS.gene052376 | MS.gene35408 | 0.809249 | 2.08E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene35408 | 0.811868 | 5.64E-51 | -1.69E-46 |
| MS.gene052426 | MS.gene35408 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene35408 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene35408 | 0.826567 | 2.53E-54 | -1.69E-46 |
| MS.gene052867 | MS.gene35408 | 0.816363 | 5.75E-52 | -1.69E-46 |
| MS.gene05288 | MS.gene35408 | 0.828708 | 7.74E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene35408 | 0.800416 | 1.46E-48 | -1.69E-46 |
| MS.gene05289 | MS.gene35408 | 0.814982 | 1.17E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene35408 | 0.818795 | 1.63E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene35408 | 0.872023 | 4.37E-67 | -1.69E-46 |
| MS.gene053184 | MS.gene35408 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene35408 | 0.840836 | 6.84E-58 | -1.69E-46 |
| MS.gene053494 | MS.gene35408 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene053565 | MS.gene35408 | 0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene053584 | MS.gene35408 | 0.837201 | 5.98E-57 | -1.69E-46 |
| MS.gene053966 | MS.gene35408 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene053967 | MS.gene35408 | 0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene35408 | 0.815408 | 9.39E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene35408 | 0.848555 | 5.69E-60 | -1.69E-46 |
| MS.gene054160 | MS.gene35408 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene05417 | MS.gene35408 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene35408 | 0.825145 | 5.50E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene35408 | -0.823589 | 1.28E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene35408 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene35408 | 0.837057 | 6.50E-57 | -1.69E-46 |
| MS.gene054433 | MS.gene35408 | 0.806154 | 9.44E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene35408 | 0.84408 | 9.44E-59 | -1.69E-46 |
| MS.gene054468 | MS.gene35408 | 0.84296 | 1.88E-58 | -1.69E-46 |
| MS.gene054472 | MS.gene35408 | 0.839513 | 1.52E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene35408 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene054559 | MS.gene35408 | 0.857297 | 1.80E-62 | -1.69E-46 |
| MS.gene054610 | MS.gene35408 | 0.812968 | 3.25E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene35408 | 0.809446 | 1.89E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene35408 | 0.810317 | 1.22E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene35408 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene35408 | 0.840804 | 6.97E-58 | -1.69E-46 |
| MS.gene05510 | MS.gene35408 | 0.860658 | 1.77E-63 | -1.69E-46 |
| MS.gene055227 | MS.gene35408 | 0.822945 | 1.81E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene35408 | 0.808479 | 3.04E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene35408 | 0.859739 | 3.36E-63 | -1.69E-46 |
| MS.gene055357 | MS.gene35408 | 0.837909 | 3.93E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene35408 | 0.869555 | 2.84E-66 | -1.69E-46 |
| MS.gene055367 | MS.gene35408 | 0.815555 | 8.71E-52 | -1.69E-46 |
| MS.gene055608 | MS.gene35408 | 0.801657 | 8.12E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene35408 | 0.820386 | 7.05E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene35408 | 0.874559 | 6.14E-68 | -1.69E-46 |
| MS.gene055818 | MS.gene35408 | 0.857843 | 1.24E-62 | -1.69E-46 |
| MS.gene055926 | MS.gene35408 | 0.819861 | 9.30E-53 | -1.69E-46 |
| MS.gene05595 | MS.gene35408 | 0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene35408 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene056162 | MS.gene35408 | 0.828898 | 6.96E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene35408 | 0.812941 | 3.29E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene35408 | 0.837013 | 6.68E-57 | -1.69E-46 |
| MS.gene056873 | MS.gene35408 | 0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene056952 | MS.gene35408 | 0.80698 | 6.32E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene35408 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene057021 | MS.gene35408 | 0.805868 | 1.08E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene35408 | 0.852271 | 5.15E-61 | -1.69E-46 |
| MS.gene057060 | MS.gene35408 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene35408 | -0.810493 | 1.12E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene35408 | 0.835819 | 1.34E-56 | -1.69E-46 |
| MS.gene057200 | MS.gene35408 | 0.805473 | 1.31E-49 | -1.69E-46 |
| MS.gene057394 | MS.gene35408 | 0.818507 | 1.89E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene35408 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene35408 | 0.809869 | 1.53E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene35408 | 0.811744 | 6.01E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene35408 | 0.820336 | 7.24E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene35408 | 0.833922 | 4.04E-56 | -1.69E-46 |
| MS.gene057693 | MS.gene35408 | 0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene35408 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene35408 | 0.824504 | 7.79E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene35408 | 0.838713 | 2.44E-57 | -1.69E-46 |
| MS.gene058548 | MS.gene35408 | 0.813591 | 2.37E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene35408 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene05872 | MS.gene35408 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene35408 | 0.844003 | 9.89E-59 | -1.69E-46 |
| MS.gene059124 | MS.gene35408 | 0.823617 | 1.26E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene35408 | 0.857809 | 1.27E-62 | -1.69E-46 |
| MS.gene059161 | MS.gene35408 | 0.841362 | 4.98E-58 | -1.69E-46 |
| MS.gene059272 | MS.gene35408 | 0.810108 | 1.36E-50 | -1.69E-46 |
| MS.gene059382 | MS.gene35408 | 0.843008 | 1.82E-58 | -1.69E-46 |
| MS.gene059550 | MS.gene35408 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene35408 | 0.803126 | 4.04E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene35408 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene35408 | 0.832169 | 1.10E-55 | -1.69E-46 |
| MS.gene05973 | MS.gene35408 | 0.820636 | 6.18E-53 | -1.69E-46 |
| MS.gene059789 | MS.gene35408 | 0.835877 | 1.30E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene35408 | 0.813742 | 2.19E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene35408 | 0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene35408 | -0.826436 | 2.72E-54 | -1.69E-46 |
| MS.gene060167 | MS.gene35408 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene060246 | MS.gene35408 | 0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene35408 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene35408 | 0.874889 | 4.75E-68 | -1.69E-46 |
| MS.gene06052 | MS.gene35408 | 0.83447 | 2.94E-56 | -1.69E-46 |
| MS.gene060553 | MS.gene35408 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene35408 | 0.856532 | 3.02E-62 | -1.69E-46 |
| MS.gene060683 | MS.gene35408 | 0.860776 | 1.63E-63 | -1.69E-46 |
| MS.gene060685 | MS.gene35408 | 0.858908 | 5.96E-63 | -1.69E-46 |
| MS.gene060781 | MS.gene35408 | 0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene35408 | 0.834072 | 3.70E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene35408 | 0.823751 | 1.17E-53 | -1.69E-46 |
| MS.gene060879 | MS.gene35408 | 0.820611 | 6.26E-53 | -1.69E-46 |
| MS.gene060918 | MS.gene35408 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene060942 | MS.gene35408 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene35408 | 0.859207 | 4.85E-63 | -1.69E-46 |
| MS.gene061040 | MS.gene35408 | -0.813852 | 2.08E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene35408 | -0.847498 | 1.11E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35408.t1 | MTR_2g086450 | 98.396 | 374 | 4 | 2 | 1 | 373 | 17 | 389 | 0.0 | 748 |
| MS.gene35408.t1 | MTR_6g032990 | 50.000 | 402 | 111 | 14 | 22 | 373 | 35 | 396 | 7.87e-105 | 314 |
| MS.gene35408.t1 | MTR_5g041350 | 52.941 | 204 | 87 | 1 | 22 | 225 | 8 | 202 | 3.81e-67 | 216 |
| MS.gene35408.t1 | MTR_4g081710 | 53.623 | 207 | 82 | 4 | 22 | 225 | 10 | 205 | 2.12e-63 | 206 |
| MS.gene35408.t1 | MTR_6g444980 | 56.395 | 172 | 55 | 5 | 19 | 189 | 25 | 177 | 2.98e-53 | 181 |
| MS.gene35408.t1 | MTR_5g027440 | 50.802 | 187 | 81 | 4 | 22 | 208 | 18 | 193 | 7.72e-52 | 174 |
| MS.gene35408.t1 | MTR_6g444980 | 57.051 | 156 | 47 | 5 | 19 | 173 | 25 | 161 | 2.66e-47 | 164 |
| MS.gene35408.t1 | MTR_7g088070 | 43.655 | 197 | 84 | 3 | 28 | 221 | 49 | 221 | 2.65e-43 | 152 |
| MS.gene35408.t1 | MTR_7g088070 | 44.670 | 197 | 86 | 5 | 28 | 221 | 49 | 225 | 9.09e-43 | 150 |
| MS.gene35408.t1 | MTR_2g027800 | 40.079 | 252 | 123 | 9 | 11 | 245 | 19 | 259 | 6.37e-41 | 146 |
| MS.gene35408.t1 | MTR_2g027860 | 46.023 | 176 | 72 | 3 | 11 | 184 | 31 | 185 | 1.61e-40 | 146 |
| MS.gene35408.t1 | MTR_7g098250 | 45.251 | 179 | 72 | 4 | 5 | 178 | 233 | 390 | 2.13e-39 | 146 |
| MS.gene35408.t1 | MTR_2g027800 | 38.889 | 252 | 112 | 8 | 11 | 245 | 19 | 245 | 7.10e-39 | 140 |
| MS.gene35408.t1 | MTR_1g053835 | 43.850 | 187 | 73 | 5 | 11 | 188 | 236 | 399 | 7.73e-38 | 141 |
| MS.gene35408.t1 | MTR_1g090670 | 41.026 | 195 | 102 | 4 | 11 | 205 | 26 | 207 | 2.28e-37 | 137 |
| MS.gene35408.t1 | MTR_1g080330 | 43.293 | 164 | 72 | 2 | 15 | 178 | 161 | 303 | 1.24e-36 | 137 |
| MS.gene35408.t1 | MTR_7g093030 | 43.871 | 155 | 65 | 3 | 28 | 182 | 211 | 343 | 1.16e-34 | 131 |
| MS.gene35408.t1 | MTR_7g115530 | 43.590 | 156 | 66 | 3 | 29 | 184 | 218 | 351 | 5.04e-34 | 130 |
| MS.gene35408.t1 | MTR_1g080330 | 41.958 | 143 | 62 | 2 | 15 | 157 | 161 | 282 | 1.72e-28 | 112 |
| MS.gene35408.t1 | MTR_7g068600 | 43.506 | 154 | 63 | 5 | 25 | 175 | 9 | 141 | 1.07e-27 | 109 |
| MS.gene35408.t1 | MTR_7g115530 | 42.636 | 129 | 53 | 2 | 29 | 157 | 218 | 325 | 6.26e-26 | 106 |
| MS.gene35408.t1 | MTR_1g053800 | 38.372 | 172 | 84 | 6 | 17 | 188 | 165 | 314 | 3.57e-25 | 104 |
| MS.gene35408.t1 | MTR_5g041350 | 53.846 | 91 | 42 | 0 | 135 | 225 | 1 | 91 | 1.45e-24 | 100 |
| MS.gene35408.t1 | MTR_5g041350 | 52.688 | 93 | 44 | 0 | 133 | 225 | 21 | 113 | 2.59e-24 | 100 |
| MS.gene35408.t1 | MTR_7g115530 | 64.912 | 57 | 20 | 0 | 29 | 85 | 218 | 274 | 1.85e-21 | 94.0 |
| MS.gene35408.t1 | MTR_7g115530 | 64.912 | 57 | 20 | 0 | 29 | 85 | 218 | 274 | 7.84e-21 | 92.8 |
| MS.gene35408.t1 | MTR_7g093030 | 60.345 | 58 | 23 | 0 | 28 | 85 | 211 | 268 | 4.18e-20 | 89.7 |
| MS.gene35408.t1 | MTR_1g053830 | 52.381 | 63 | 30 | 0 | 25 | 87 | 14 | 76 | 7.18e-20 | 84.0 |
| MS.gene35408.t1 | MTR_7g115530 | 67.308 | 52 | 17 | 0 | 29 | 80 | 218 | 269 | 3.42e-19 | 87.0 |
| MS.gene35408.t1 | MTR_7g069660 | 62.500 | 56 | 21 | 0 | 30 | 85 | 72 | 127 | 1.80e-18 | 85.9 |
| MS.gene35408.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 29 | 79 | 218 | 268 | 2.41e-18 | 84.7 |
| MS.gene35408.t1 | MTR_2g023580 | 64.151 | 53 | 19 | 0 | 30 | 82 | 56 | 108 | 7.56e-18 | 82.4 |
| MS.gene35408.t1 | MTR_2g084230 | 52.778 | 72 | 32 | 1 | 14 | 85 | 84 | 153 | 9.32e-17 | 81.3 |
| MS.gene35408.t1 | MTR_2g084230 | 52.778 | 72 | 32 | 1 | 14 | 85 | 84 | 153 | 1.02e-16 | 80.5 |
| MS.gene35408.t1 | MTR_8g086410 | 58.929 | 56 | 23 | 0 | 30 | 85 | 112 | 167 | 1.98e-16 | 80.5 |
| MS.gene35408.t1 | MTR_8g086410 | 58.929 | 56 | 23 | 0 | 30 | 85 | 110 | 165 | 2.02e-16 | 80.5 |
| MS.gene35408.t1 | MTR_1g112370 | 62.264 | 53 | 20 | 0 | 30 | 82 | 23 | 75 | 3.24e-16 | 79.3 |
| MS.gene35408.t1 | MTR_3g450310 | 50.794 | 63 | 28 | 1 | 29 | 91 | 19 | 78 | 3.44e-16 | 77.0 |
| MS.gene35408.t1 | MTR_0223s0040 | 60.377 | 53 | 21 | 0 | 30 | 82 | 19 | 71 | 5.59e-16 | 77.8 |
| MS.gene35408.t1 | MTR_6g071625 | 53.125 | 64 | 30 | 0 | 30 | 93 | 203 | 266 | 1.15e-15 | 77.8 |
| MS.gene35408.t1 | MTR_4g021790 | 52.174 | 69 | 31 | 2 | 16 | 83 | 154 | 221 | 1.34e-15 | 76.6 |
| MS.gene35408.t1 | MTR_2g016220 | 57.143 | 56 | 24 | 0 | 30 | 85 | 90 | 145 | 2.61e-15 | 77.0 |
| MS.gene35408.t1 | MTR_2g016220 | 57.143 | 56 | 24 | 0 | 30 | 85 | 90 | 145 | 2.64e-15 | 77.0 |
| MS.gene35408.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 30 | 85 | 220 | 275 | 4.40e-15 | 76.6 |
| MS.gene35408.t1 | MTR_3g064840 | 58.929 | 56 | 23 | 0 | 30 | 85 | 275 | 330 | 6.44e-15 | 76.3 |
| MS.gene35408.t1 | MTR_8g086410 | 56.604 | 53 | 23 | 0 | 30 | 82 | 112 | 164 | 7.38e-15 | 75.9 |
| MS.gene35408.t1 | MTR_1g021520 | 44.318 | 88 | 42 | 2 | 30 | 110 | 127 | 214 | 1.50e-14 | 73.9 |
| MS.gene35408.t1 | MTR_8g066310 | 57.143 | 56 | 24 | 0 | 30 | 85 | 174 | 229 | 3.85e-14 | 73.2 |
| MS.gene35408.t1 | MTR_1g090670 | 34.483 | 145 | 82 | 4 | 61 | 205 | 1 | 132 | 4.69e-14 | 71.2 |
| MS.gene35408.t1 | MTR_2g034960 | 55.932 | 59 | 25 | 1 | 25 | 83 | 207 | 264 | 4.84e-14 | 73.9 |
| MS.gene35408.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 107 | 164 | 6.71e-14 | 73.6 |
| MS.gene35408.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 211 | 268 | 7.64e-14 | 73.2 |
| MS.gene35408.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 211 | 268 | 7.84e-14 | 73.2 |
| MS.gene35408.t1 | MTR_4g021855 | 56.364 | 55 | 23 | 1 | 29 | 83 | 168 | 221 | 9.97e-14 | 71.6 |
| MS.gene35408.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 25 | 83 | 209 | 266 | 1.07e-13 | 72.8 |
| MS.gene35408.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 25 | 83 | 209 | 266 | 1.12e-13 | 72.8 |
| MS.gene35408.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 30 | 79 | 90 | 139 | 1.26e-13 | 72.0 |
| MS.gene35408.t1 | MTR_7g093010 | 33.333 | 147 | 76 | 3 | 28 | 173 | 212 | 337 | 2.05e-13 | 71.2 |
| MS.gene35408.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 25 | 83 | 127 | 184 | 2.87e-13 | 71.2 |
| MS.gene35408.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 25 | 83 | 196 | 253 | 3.30e-13 | 71.2 |
| MS.gene35408.t1 | MTR_4g021760 | 55.556 | 54 | 23 | 1 | 29 | 82 | 169 | 221 | 4.59e-13 | 69.7 |
| MS.gene35408.t1 | MTR_4g064730 | 43.333 | 90 | 49 | 2 | 26 | 114 | 128 | 216 | 6.71e-13 | 69.3 |
| MS.gene35408.t1 | MTR_7g089010 | 58.182 | 55 | 22 | 1 | 29 | 83 | 91 | 144 | 8.89e-13 | 68.6 |
| MS.gene35408.t1 | MTR_4g113140 | 55.172 | 58 | 26 | 0 | 26 | 83 | 232 | 289 | 1.30e-12 | 68.9 |
| MS.gene35408.t1 | MTR_1g093080 | 56.364 | 55 | 24 | 0 | 29 | 83 | 211 | 265 | 1.40e-12 | 68.6 |
| MS.gene35408.t1 | MTR_4g021845 | 56.863 | 51 | 21 | 1 | 29 | 79 | 168 | 217 | 2.45e-12 | 66.2 |
| MS.gene35408.t1 | MTR_4g086835 | 53.448 | 58 | 27 | 0 | 26 | 83 | 271 | 328 | 5.06e-12 | 67.4 |
| MS.gene35408.t1 | MTR_1g013170 | 56.364 | 55 | 23 | 1 | 29 | 83 | 191 | 244 | 5.58e-12 | 67.4 |
| MS.gene35408.t1 | MTR_5g017980 | 44.737 | 76 | 42 | 0 | 29 | 104 | 193 | 268 | 8.14e-12 | 66.2 |
| MS.gene35408.t1 | MTR_4g131600 | 50.847 | 59 | 28 | 1 | 25 | 83 | 197 | 254 | 1.09e-11 | 66.6 |
| MS.gene35408.t1 | MTR_4g078810 | 53.704 | 54 | 24 | 1 | 29 | 82 | 158 | 210 | 1.10e-11 | 66.2 |
| MS.gene35408.t1 | MTR_8g079940 | 46.667 | 75 | 33 | 2 | 29 | 97 | 209 | 282 | 1.49e-11 | 66.2 |
| MS.gene35408.t1 | MTR_4g131570 | 53.333 | 60 | 27 | 1 | 25 | 84 | 199 | 257 | 1.62e-11 | 66.2 |
| MS.gene35408.t1 | MTR_2g090675 | 53.846 | 52 | 23 | 1 | 31 | 82 | 163 | 213 | 1.86e-11 | 65.5 |
| MS.gene35408.t1 | MTR_5g054300 | 38.947 | 95 | 49 | 2 | 12 | 106 | 186 | 271 | 2.92e-11 | 64.7 |
| MS.gene35408.t1 | MTR_7g026400 | 52.727 | 55 | 25 | 1 | 29 | 83 | 157 | 210 | 3.19e-11 | 65.1 |
| MS.gene35408.t1 | MTR_4g131580 | 53.333 | 60 | 27 | 1 | 25 | 84 | 196 | 254 | 4.58e-11 | 64.7 |
| MS.gene35408.t1 | MTR_3g086100 | 49.153 | 59 | 29 | 1 | 25 | 83 | 124 | 181 | 4.94e-11 | 64.3 |
| MS.gene35408.t1 | MTR_3g106220 | 49.153 | 59 | 29 | 1 | 25 | 83 | 194 | 251 | 4.95e-11 | 64.7 |
| MS.gene35408.t1 | MTR_3g086100 | 49.153 | 59 | 29 | 1 | 25 | 83 | 195 | 252 | 5.93e-11 | 64.3 |
| MS.gene35408.t1 | MTR_4g086835 | 53.448 | 58 | 26 | 1 | 26 | 83 | 271 | 327 | 7.68e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35408.t1 | AT3G04030 | 54.040 | 396 | 140 | 12 | 1 | 373 | 18 | 394 | 2.85e-122 | 358 |
| MS.gene35408.t1 | AT3G04030 | 53.535 | 396 | 141 | 13 | 1 | 373 | 18 | 393 | 5.14e-119 | 350 |
| MS.gene35408.t1 | AT5G18240 | 52.840 | 405 | 139 | 15 | 1 | 373 | 18 | 402 | 1.68e-118 | 349 |
| MS.gene35408.t1 | AT5G18240 | 52.840 | 405 | 139 | 15 | 1 | 373 | 18 | 402 | 1.68e-118 | 349 |
| MS.gene35408.t1 | AT5G18240 | 52.346 | 405 | 139 | 16 | 1 | 373 | 18 | 400 | 4.47e-115 | 340 |
| MS.gene35408.t1 | AT3G04030 | 52.525 | 396 | 140 | 13 | 1 | 373 | 18 | 388 | 7.89e-115 | 339 |
| MS.gene35408.t1 | AT5G18240 | 50.864 | 405 | 141 | 15 | 1 | 373 | 18 | 396 | 3.95e-111 | 330 |
| MS.gene35408.t1 | AT5G18240 | 50.864 | 405 | 141 | 15 | 1 | 373 | 18 | 396 | 3.95e-111 | 330 |
| MS.gene35408.t1 | AT3G04030 | 49.107 | 336 | 130 | 11 | 61 | 373 | 1 | 318 | 2.61e-83 | 256 |
| MS.gene35408.t1 | AT3G04030 | 47.321 | 336 | 130 | 12 | 61 | 373 | 1 | 312 | 4.58e-76 | 238 |
| MS.gene35408.t1 | AT5G18240 | 46.377 | 345 | 128 | 15 | 61 | 373 | 1 | 320 | 4.71e-72 | 228 |
| MS.gene35408.t1 | AT1G69580 | 53.333 | 210 | 91 | 2 | 15 | 222 | 20 | 224 | 4.01e-65 | 210 |
| MS.gene35408.t1 | AT1G69580 | 53.110 | 209 | 92 | 2 | 15 | 222 | 20 | 223 | 1.38e-64 | 209 |
| MS.gene35408.t1 | AT4G13640 | 47.244 | 254 | 111 | 6 | 19 | 258 | 27 | 271 | 1.76e-61 | 199 |
| MS.gene35408.t1 | AT3G24120 | 49.528 | 212 | 86 | 2 | 3 | 208 | 15 | 211 | 3.95e-60 | 196 |
| MS.gene35408.t1 | AT4G13640 | 46.693 | 257 | 111 | 7 | 19 | 258 | 27 | 274 | 2.47e-59 | 194 |
| MS.gene35408.t1 | AT3G24120 | 48.837 | 215 | 86 | 3 | 3 | 208 | 15 | 214 | 4.49e-58 | 191 |
| MS.gene35408.t1 | AT1G79430 | 54.706 | 170 | 59 | 3 | 19 | 188 | 24 | 175 | 1.23e-52 | 179 |
| MS.gene35408.t1 | AT5G45580 | 44.949 | 198 | 86 | 3 | 14 | 203 | 8 | 190 | 1.73e-47 | 163 |
| MS.gene35408.t1 | AT3G12730 | 50.595 | 168 | 64 | 4 | 18 | 182 | 12 | 163 | 3.40e-46 | 158 |
| MS.gene35408.t1 | AT5G45580 | 45.503 | 189 | 80 | 3 | 23 | 203 | 1 | 174 | 9.96e-46 | 157 |
| MS.gene35408.t1 | AT2G01060 | 47.024 | 168 | 66 | 4 | 28 | 192 | 14 | 161 | 3.17e-41 | 147 |
| MS.gene35408.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 187 | 322 | 8.08e-37 | 137 |
| MS.gene35408.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 187 | 322 | 8.08e-37 | 137 |
| MS.gene35408.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 230 | 365 | 1.59e-36 | 137 |
| MS.gene35408.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 194 | 332 | 4.49e-36 | 135 |
| MS.gene35408.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 194 | 332 | 4.49e-36 | 135 |
| MS.gene35408.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 234 | 372 | 6.71e-36 | 136 |
| MS.gene35408.t1 | AT4G28610 | 38.462 | 208 | 105 | 5 | 28 | 235 | 224 | 408 | 9.72e-36 | 135 |
| MS.gene35408.t1 | AT5G06800 | 45.455 | 154 | 65 | 2 | 29 | 181 | 192 | 327 | 9.98e-35 | 132 |
| MS.gene35408.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene35408.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene35408.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene35408.t1 | AT5G06800 | 44.444 | 153 | 63 | 2 | 29 | 181 | 192 | 322 | 3.07e-33 | 127 |
| MS.gene35408.t1 | AT2G20400 | 40.854 | 164 | 69 | 3 | 31 | 194 | 233 | 368 | 6.66e-31 | 121 |
| MS.gene35408.t1 | AT2G20400 | 40.854 | 164 | 70 | 4 | 31 | 194 | 233 | 369 | 9.81e-31 | 121 |
| MS.gene35408.t1 | AT1G79430 | 48.438 | 128 | 48 | 3 | 61 | 188 | 1 | 110 | 1.70e-26 | 107 |
| MS.gene35408.t1 | AT2G01060 | 43.939 | 132 | 51 | 4 | 64 | 192 | 1 | 112 | 1.36e-23 | 98.2 |
| MS.gene35408.t1 | AT3G12730 | 44.800 | 125 | 50 | 4 | 61 | 182 | 1 | 109 | 8.47e-22 | 92.0 |
| MS.gene35408.t1 | AT3G04450 | 60.656 | 61 | 24 | 0 | 25 | 85 | 234 | 294 | 3.92e-21 | 93.2 |
| MS.gene35408.t1 | AT5G29000 | 57.746 | 71 | 28 | 1 | 28 | 98 | 230 | 298 | 4.98e-21 | 92.8 |
| MS.gene35408.t1 | AT5G06800 | 61.017 | 59 | 23 | 0 | 29 | 87 | 192 | 250 | 8.62e-20 | 88.6 |
| MS.gene35408.t1 | AT2G06020 | 48.193 | 83 | 39 | 2 | 11 | 89 | 65 | 147 | 2.19e-18 | 85.1 |
| MS.gene35408.t1 | AT2G38300 | 55.072 | 69 | 30 | 1 | 30 | 98 | 55 | 122 | 5.84e-18 | 84.3 |
| MS.gene35408.t1 | AT2G42660 | 58.065 | 62 | 25 | 1 | 30 | 91 | 51 | 111 | 1.30e-17 | 82.0 |
| MS.gene35408.t1 | AT1G14600 | 60.714 | 56 | 22 | 0 | 30 | 85 | 24 | 79 | 4.92e-17 | 80.5 |
| MS.gene35408.t1 | AT4G04605 | 60.377 | 53 | 21 | 0 | 30 | 82 | 15 | 67 | 9.17e-17 | 79.0 |
| MS.gene35408.t1 | AT2G40260 | 58.929 | 56 | 23 | 0 | 30 | 85 | 83 | 138 | 1.27e-16 | 81.3 |
| MS.gene35408.t1 | AT2G02060 | 62.264 | 53 | 20 | 0 | 30 | 82 | 30 | 82 | 1.73e-16 | 79.0 |
| MS.gene35408.t1 | AT2G02060 | 62.264 | 53 | 20 | 0 | 30 | 82 | 30 | 82 | 1.73e-16 | 79.0 |
| MS.gene35408.t1 | AT5G42630 | 55.072 | 69 | 30 | 1 | 17 | 85 | 94 | 161 | 8.20e-16 | 76.3 |
| MS.gene35408.t1 | AT5G16560 | 58.929 | 56 | 23 | 0 | 30 | 85 | 220 | 275 | 1.45e-15 | 77.8 |
| MS.gene35408.t1 | AT4G04580 | 54.717 | 53 | 24 | 0 | 30 | 82 | 15 | 67 | 1.66e-15 | 73.9 |
| MS.gene35408.t1 | AT5G42630 | 55.072 | 69 | 30 | 1 | 17 | 85 | 94 | 161 | 2.13e-15 | 76.3 |
| MS.gene35408.t1 | AT1G32240 | 58.929 | 56 | 23 | 0 | 30 | 85 | 214 | 269 | 2.27e-15 | 77.0 |
| MS.gene35408.t1 | AT1G32240 | 58.929 | 56 | 23 | 0 | 30 | 85 | 214 | 269 | 2.40e-15 | 77.0 |
| MS.gene35408.t1 | AT4G17695 | 51.562 | 64 | 31 | 0 | 30 | 93 | 165 | 228 | 6.42e-15 | 75.5 |
| MS.gene35408.t1 | AT5G05090 | 58.182 | 55 | 22 | 1 | 29 | 83 | 81 | 134 | 2.66e-13 | 69.7 |
| MS.gene35408.t1 | AT5G59570 | 55.172 | 58 | 25 | 1 | 26 | 83 | 138 | 194 | 3.04e-13 | 70.1 |
| MS.gene35408.t1 | AT5G59570 | 55.172 | 58 | 25 | 1 | 26 | 83 | 138 | 194 | 3.04e-13 | 70.1 |
| MS.gene35408.t1 | AT2G40970 | 56.897 | 58 | 24 | 1 | 26 | 83 | 102 | 158 | 3.64e-13 | 69.3 |
| MS.gene35408.t1 | AT5G45580 | 34.074 | 135 | 66 | 3 | 77 | 203 | 16 | 135 | 4.48e-13 | 68.6 |
| MS.gene35408.t1 | AT3G10760 | 50.000 | 70 | 34 | 1 | 14 | 83 | 90 | 158 | 4.92e-13 | 69.7 |
| MS.gene35408.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 167 | 220 | 5.89e-13 | 70.5 |
| MS.gene35408.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 237 | 290 | 6.49e-13 | 70.5 |
| MS.gene35408.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 237 | 290 | 6.60e-13 | 70.5 |
| MS.gene35408.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 8.46e-13 | 68.9 |
| MS.gene35408.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 1.01e-12 | 68.9 |
| MS.gene35408.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 1.01e-12 | 68.9 |
| MS.gene35408.t1 | AT2G03500 | 56.364 | 55 | 24 | 0 | 29 | 83 | 233 | 287 | 1.33e-12 | 68.9 |
| MS.gene35408.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 135 | 198 | 3.22e-12 | 67.4 |
| MS.gene35408.t1 | AT1G25550 | 56.364 | 55 | 24 | 0 | 29 | 83 | 209 | 263 | 3.34e-12 | 67.4 |
| MS.gene35408.t1 | AT5G58080 | 51.471 | 68 | 32 | 1 | 16 | 83 | 181 | 247 | 4.14e-12 | 68.2 |
| MS.gene35408.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 200 | 263 | 5.05e-12 | 67.0 |
| MS.gene35408.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 228 | 291 | 6.56e-12 | 67.0 |
| MS.gene35408.t1 | AT2G20570 | 55.769 | 52 | 22 | 1 | 31 | 82 | 155 | 205 | 2.07e-11 | 65.5 |
| MS.gene35408.t1 | AT2G20570 | 55.769 | 52 | 22 | 1 | 31 | 82 | 171 | 221 | 2.25e-11 | 65.5 |
| MS.gene35408.t1 | AT1G49560 | 44.048 | 84 | 44 | 1 | 29 | 109 | 192 | 275 | 2.70e-11 | 64.7 |
| MS.gene35408.t1 | AT3G25790 | 38.202 | 89 | 55 | 0 | 34 | 122 | 201 | 289 | 3.14e-11 | 64.7 |
| MS.gene35408.t1 | AT5G44190 | 50.000 | 54 | 26 | 1 | 29 | 82 | 147 | 199 | 3.37e-11 | 64.7 |
| MS.gene35408.t1 | AT5G44190 | 50.000 | 54 | 26 | 1 | 29 | 82 | 147 | 199 | 4.45e-11 | 63.9 |
| MS.gene35408.t1 | AT3G62670 | 48.438 | 64 | 29 | 1 | 25 | 84 | 207 | 270 | 4.72e-11 | 64.3 |
| MS.gene35408.t1 | AT1G68670 | 53.448 | 58 | 27 | 0 | 26 | 83 | 212 | 269 | 5.34e-11 | 63.9 |
Find 59 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTCAAAATGGAGGGTT+TGG | 0.270343 | 2.1:+15675162 | MS.gene35408:CDS |
| ACACTTGGTAGACAGAATTT+AGG | 0.292229 | 2.1:+15674955 | MS.gene35408:CDS |
| ATGCAAAACCTAGATTAAAA+TGG | 0.295286 | 2.1:+15673893 | MS.gene35408:CDS |
| AAAACAATGAAGTACTAAAA+TGG | 0.316678 | 2.1:+15675277 | MS.gene35408:CDS |
| GGAAATGGTTCTAGTGATTC+AGG | 0.325156 | 2.1:+15673853 | MS.gene35408:CDS |
| GTTGAGAATCATTCAGATAT+TGG | 0.332253 | 2.1:+15675399 | MS.gene35408:CDS |
| GAACAAGAAATCATTCAAAA+TGG | 0.339387 | 2.1:+15675153 | MS.gene35408:CDS |
| AAATAACAACCATGTGTTCA+TGG | 0.356068 | 2.1:+15675203 | MS.gene35408:CDS |
| ATGACTCTTTAAATGATATA+AGG | 0.363326 | 2.1:-15674137 | None:intergenic |
| TAGAACCATTTCCTGTTTGA+AGG | 0.369263 | 2.1:-15673843 | None:intergenic |
| GTAAACAACTTGATTTGAAT+AGG | 0.370306 | 2.1:+15675496 | MS.gene35408:CDS |
| ATGAAACTCATGGGAATTCC+AGG | 0.370323 | 2.1:+15674109 | MS.gene35408:CDS |
| ACAAAGGAACACTGCAAGAT+TGG | 0.379529 | 2.1:+15675431 | MS.gene35408:CDS |
| AGACAGAATTTAGGAATAGT+AGG | 0.380211 | 2.1:+15674964 | MS.gene35408:CDS |
| TCATTTAAAGAGTCATCTTC+AGG | 0.380557 | 2.1:+15674144 | MS.gene35408:CDS |
| ATGTTCCTTCAAACAGGAAA+TGG | 0.408546 | 2.1:+15673838 | MS.gene35408:CDS |
| TTTATTCATGTGAGTTCCAT+TGG | 0.431480 | 2.1:-15674439 | None:intergenic |
| CTTTCTCAAGCACTGATTGA+AGG | 0.431720 | 2.1:-15674924 | None:intergenic |
| TTGATTTGAATAGGTTCAGT+TGG | 0.449179 | 2.1:+15675505 | MS.gene35408:CDS |
| ATAAACCTTGCATGAAGATC+AGG | 0.452639 | 2.1:-15673919 | None:intergenic |
| CTGTCCATCGAGCCGTCGTT+TGG | 0.455742 | 2.1:-15675096 | None:intergenic |
| CTTTCCTTTCCATGAACACA+TGG | 0.455778 | 2.1:-15675212 | None:intergenic |
| ATCGAGCCGTCGTTTGGTTG+AGG | 0.465457 | 2.1:-15675090 | None:intergenic |
| AGGCACATGTTCCTTCAAAC+AGG | 0.475299 | 2.1:+15673832 | MS.gene35408:CDS |
| AATGAATTAGAAAGAAATCA+TGG | 0.479388 | 2.1:+15675354 | MS.gene35408:CDS |
| TACAAAGACACTTGCAGCTA+AGG | 0.482388 | 2.1:+15674881 | MS.gene35408:CDS |
| GGAAATTTGTCTATGAACAT+TGG | 0.485289 | 2.1:+15675375 | MS.gene35408:CDS |
| ATAGAAGCAGTTAATCAGTT+AGG | 0.490373 | 2.1:+15673940 | MS.gene35408:CDS |
| CACATGAATAAATTAACACT+TGG | 0.490644 | 2.1:+15674450 | MS.gene35408:CDS |
| ATCGTCTGACCGATCACAAA+AGG | 0.496813 | 2.1:+15675131 | MS.gene35408:CDS |
| GACAGAATTTAGGAATAGTA+GGG | 0.543038 | 2.1:+15674965 | MS.gene35408:CDS |
| CAAGAAATCATTCAAAATGG+AGG | 0.547960 | 2.1:+15675156 | MS.gene35408:CDS |
| AAATGATATAAGGTAAGCCC+TGG | 0.549274 | 2.1:-15674127 | None:intergenic |
| AAGAAATCATTCAAAATGGA+GGG | 0.551325 | 2.1:+15675157 | MS.gene35408:CDS |
| TCAGAGATGAAGGAGTTACA+AGG | 0.555449 | 2.1:+15675060 | MS.gene35408:CDS |
| CAACAAGCAACTGAATTAGC+AGG | 0.559201 | 2.1:+15675237 | MS.gene35408:CDS |
| GGCGCTGCAAATGCAGATTG+AGG | 0.562019 | 2.1:+15674624 | MS.gene35408:CDS |
| TCAACCAAACGACGGCTCGA+TGG | 0.568429 | 2.1:+15675092 | MS.gene35408:CDS |
| AATTCATTATTATTTCCTAA+CGG | 0.568566 | 2.1:-15675339 | None:intergenic |
| ACAACCATGTGTTCATGGAA+AGG | 0.581829 | 2.1:+15675208 | MS.gene35408:CDS |
| GAGAGACTTTCTGAAACCAA+TGG | 0.583065 | 2.1:+15674423 | MS.gene35408:CDS |
| TTGTTGTTGTTATTAGTCTG+TGG | 0.584414 | 2.1:-15674474 | None:intergenic |
| AAAACAGTAATGAAACTCAT+GGG | 0.594613 | 2.1:+15674100 | MS.gene35408:CDS |
| AGGAACATGTGCCTCTCAGA+TGG | 0.596232 | 2.1:-15673823 | None:intergenic |
| AAGACTCAATGAACAACTTG+AGG | 0.597565 | 2.1:+15674654 | MS.gene35408:CDS |
| AGATTAAGCAAGAATCTGCA+TGG | 0.602970 | 2.1:+15674250 | MS.gene35408:CDS |
| GAGAAAGCTCAAGAAACACT+TGG | 0.604326 | 2.1:+15674940 | MS.gene35408:CDS |
| CAGCTAAGGATAGAAGCTCA+AGG | 0.609742 | 2.1:+15674895 | MS.gene35408:CDS |
| AGTCGTGGAGATAACAATGA+AGG | 0.610907 | 2.1:+15675462 | MS.gene35408:CDS |
| GGACACCTGATCTTCATGCA+AGG | 0.639163 | 2.1:+15673914 | MS.gene35408:CDS |
| GAAGCAGTTAATCAGTTAGG+CGG | 0.649355 | 2.1:+15673943 | MS.gene35408:CDS |
| AGATTGGATCTAAACAGTCG+TGG | 0.649789 | 2.1:+15675447 | MS.gene35408:CDS |
| TGAAACTCATGGGAATTCCA+GGG | 0.657200 | 2.1:+15674110 | MS.gene35408:CDS |
| TGTTGAATTCAGACACTGTG+AGG | 0.662262 | 2.1:-15675034 | None:intergenic |
| TAGAGATTTACACATAAGCG+AGG | 0.677842 | 2.1:+15674603 | MS.gene35408:intron |
| AGTTAATCAGTTAGGCGGAG+CGG | 0.682383 | 2.1:+15673948 | MS.gene35408:CDS |
| AGTACTAAAATGGTGTGTTG+AGG | 0.684708 | 2.1:+15675287 | MS.gene35408:CDS |
| GAATGTCAATACCATCTGAG+AGG | 0.692919 | 2.1:+15673812 | None:intergenic |
| ATATTGGTGAGTTTCAACAA+AGG | 0.741956 | 2.1:+15675415 | MS.gene35408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCATTATTATTTCCTAA+CGG | - | chr2.1:15675342-15675361 | None:intergenic | 15.0% |
| !! | AATGAATTAGAAAGAAATCA+TGG | + | chr2.1:15675354-15675373 | MS.gene35408:CDS | 20.0% |
| !! | ATGACTCTTTAAATGATATA+AGG | - | chr2.1:15674140-15674159 | None:intergenic | 20.0% |
| !!! | AAAACAATGAAGTACTAAAA+TGG | + | chr2.1:15675277-15675296 | MS.gene35408:CDS | 20.0% |
| !!! | ATGAAGAGTGTAATTAAAAA+AGG | - | chr2.1:15674516-15674535 | None:intergenic | 20.0% |
| !!! | TGAAGAGTGTAATTAAAAAA+GGG | - | chr2.1:15674515-15674534 | None:intergenic | 20.0% |
| !!! | TTAGTACTTCATTGTTTTTA+AGG | - | chr2.1:15675275-15675294 | None:intergenic | 20.0% |
| !!! | TTTTTTTACCATACTTTGTA+TGG | + | chr2.1:15674185-15674204 | MS.gene35408:intron | 20.0% |
| ! | AAAAACAGTAATGAAACTCA+TGG | + | chr2.1:15674099-15674118 | MS.gene35408:CDS | 25.0% |
| ! | AAAACAGTAATGAAACTCAT+GGG | + | chr2.1:15674100-15674119 | MS.gene35408:CDS | 25.0% |
| ! | AAGAAATCATTCAAAATGGA+GGG | + | chr2.1:15675157-15675176 | MS.gene35408:CDS | 25.0% |
| ! | ATGCAAAACCTAGATTAAAA+TGG | + | chr2.1:15673893-15673912 | MS.gene35408:CDS | 25.0% |
| ! | ATGTGTAAATCTCTATCAAA+AGG | - | chr2.1:15674598-15674617 | None:intergenic | 25.0% |
| ! | CACATGAATAAATTAACACT+TGG | + | chr2.1:15674450-15674469 | MS.gene35408:CDS | 25.0% |
| ! | GAACAAGAAATCATTCAAAA+TGG | + | chr2.1:15675153-15675172 | MS.gene35408:CDS | 25.0% |
| ! | TGTGTAAATCTCTATCAAAA+GGG | - | chr2.1:15674597-15674616 | None:intergenic | 25.0% |
| !! | ATGAGTTTCATTACTGTTTT+TGG | - | chr2.1:15674100-15674119 | None:intergenic | 25.0% |
| !! | ATTACAAACTCATTCTCTTT+TGG | + | chr2.1:15673990-15674009 | MS.gene35408:intron | 25.0% |
| !! | GTAAACAACTTGATTTGAAT+AGG | + | chr2.1:15675496-15675515 | MS.gene35408:CDS | 25.0% |
| AAACCAATATTCAAAACCTG+TGG | + | chr2.1:15674854-15674873 | MS.gene35408:intron | 30.0% | |
| AAATAACAACCATGTGTTCA+TGG | + | chr2.1:15675203-15675222 | MS.gene35408:CDS | 30.0% | |
| AGAAACAAAATTAACGCGTT+TGG | - | chr2.1:15674823-15674842 | None:intergenic | 30.0% | |
| AGACAGAATTTAGGAATAGT+AGG | + | chr2.1:15674964-15674983 | MS.gene35408:CDS | 30.0% | |
| ATAGAAGCAGTTAATCAGTT+AGG | + | chr2.1:15673940-15673959 | MS.gene35408:CDS | 30.0% | |
| ATATTGGTGAGTTTCAACAA+AGG | + | chr2.1:15675415-15675434 | MS.gene35408:CDS | 30.0% | |
| CAAGAAATCATTCAAAATGG+AGG | + | chr2.1:15675156-15675175 | MS.gene35408:CDS | 30.0% | |
| GACAGAATTTAGGAATAGTA+GGG | + | chr2.1:15674965-15674984 | MS.gene35408:CDS | 30.0% | |
| GGAAATTTGTCTATGAACAT+TGG | + | chr2.1:15675375-15675394 | MS.gene35408:CDS | 30.0% | |
| GTATAAAATCTTAGAGTGGT+AGG | - | chr2.1:15674562-15674581 | None:intergenic | 30.0% | |
| GTCAGTATAAAATCTTAGAG+TGG | - | chr2.1:15674566-15674585 | None:intergenic | 30.0% | |
| GTTGAGAATCATTCAGATAT+TGG | + | chr2.1:15675399-15675418 | MS.gene35408:CDS | 30.0% | |
| TAATTGCACCATACAAAGTA+TGG | - | chr2.1:15674196-15674215 | None:intergenic | 30.0% | |
| TCATTTAAAGAGTCATCTTC+AGG | + | chr2.1:15674144-15674163 | MS.gene35408:CDS | 30.0% | |
| TTTATTCATGTGAGTTCCAT+TGG | - | chr2.1:15674442-15674461 | None:intergenic | 30.0% | |
| ! | TTCAACATTTTCAGAGATGA+AGG | + | chr2.1:15675050-15675069 | MS.gene35408:CDS | 30.0% |
| ! | TTGATTTGAATAGGTTCAGT+TGG | + | chr2.1:15675505-15675524 | MS.gene35408:CDS | 30.0% |
| ! | TTGTTGTTGTTATTAGTCTG+TGG | - | chr2.1:15674477-15674496 | None:intergenic | 30.0% |
| ! | TTTCTTGTTCCTTTTGTGAT+CGG | - | chr2.1:15675143-15675162 | None:intergenic | 30.0% |
| !! | AAACTCATTCTCTTTTGGTT+TGG | + | chr2.1:15673995-15674014 | MS.gene35408:intron | 30.0% |
| AAATGATATAAGGTAAGCCC+TGG | - | chr2.1:15674130-15674149 | None:intergenic | 35.0% | |
| AAGACTCAATGAACAACTTG+AGG | + | chr2.1:15674654-15674673 | MS.gene35408:CDS | 35.0% | |
| ACACTTGGTAGACAGAATTT+AGG | + | chr2.1:15674955-15674974 | MS.gene35408:CDS | 35.0% | |
| AGATTAAGCAAGAATCTGCA+TGG | + | chr2.1:15674250-15674269 | MS.gene35408:CDS | 35.0% | |
| AGTACTAAAATGGTGTGTTG+AGG | + | chr2.1:15675287-15675306 | MS.gene35408:CDS | 35.0% | |
| ATAAACCTTGCATGAAGATC+AGG | - | chr2.1:15673922-15673941 | None:intergenic | 35.0% | |
| ATCATTCAAAATGGAGGGTT+TGG | + | chr2.1:15675162-15675181 | MS.gene35408:CDS | 35.0% | |
| ATGTTCCTTCAAACAGGAAA+TGG | + | chr2.1:15673838-15673857 | MS.gene35408:CDS | 35.0% | |
| TAGAACCATTTCCTGTTTGA+AGG | - | chr2.1:15673846-15673865 | None:intergenic | 35.0% | |
| TAGAGATTTACACATAAGCG+AGG | + | chr2.1:15674603-15674622 | MS.gene35408:intron | 35.0% | |
| TCTTGCTTAATCTGTACTTC+TGG | - | chr2.1:15674243-15674262 | None:intergenic | 35.0% | |
| TTGCTTCTGCAATAGAAAGA+TGG | - | chr2.1:15674075-15674094 | None:intergenic | 35.0% | |
| ! | AGTAATTTTCTCACTCCGTT+AGG | + | chr2.1:15675324-15675343 | MS.gene35408:CDS | 35.0% |
| !! | TCAGGTGTCCATTTTAATCT+AGG | - | chr2.1:15673904-15673923 | None:intergenic | 35.0% |
| ACAAAGGAACACTGCAAGAT+TGG | + | chr2.1:15675431-15675450 | MS.gene35408:CDS | 40.0% | |
| ACAACCATGTGTTCATGGAA+AGG | + | chr2.1:15675208-15675227 | MS.gene35408:CDS | 40.0% | |
| AGATTGGATCTAAACAGTCG+TGG | + | chr2.1:15675447-15675466 | MS.gene35408:CDS | 40.0% | |
| AGTCGTGGAGATAACAATGA+AGG | + | chr2.1:15675462-15675481 | MS.gene35408:CDS | 40.0% | |
| ATGAAACTCATGGGAATTCC+AGG | + | chr2.1:15674109-15674128 | MS.gene35408:CDS | 40.0% | |
| CAACAAGCAACTGAATTAGC+AGG | + | chr2.1:15675237-15675256 | MS.gene35408:CDS | 40.0% | |
| CAATATTCAAAACCTGTGGC+AGG | + | chr2.1:15674858-15674877 | MS.gene35408:intron | 40.0% | |
| CTTTCCTTTCCATGAACACA+TGG | - | chr2.1:15675215-15675234 | None:intergenic | 40.0% | |
| GAAGCAGTTAATCAGTTAGG+CGG | + | chr2.1:15673943-15673962 | MS.gene35408:CDS | 40.0% | |
| GAGAAAGCTCAAGAAACACT+TGG | + | chr2.1:15674940-15674959 | MS.gene35408:CDS | 40.0% | |
| TACAAAGACACTTGCAGCTA+AGG | + | chr2.1:15674881-15674900 | MS.gene35408:CDS | 40.0% | |
| TCAGAGATGAAGGAGTTACA+AGG | + | chr2.1:15675060-15675079 | MS.gene35408:CDS | 40.0% | |
| TCTATGTTACTCGAGATTCG+AGG | - | chr2.1:15674023-15674042 | None:intergenic | 40.0% | |
| TGAAACTCATGGGAATTCCA+GGG | + | chr2.1:15674110-15674129 | MS.gene35408:CDS | 40.0% | |
| TGTTGAATTCAGACACTGTG+AGG | - | chr2.1:15675037-15675056 | None:intergenic | 40.0% | |
| ! | CTGTACTTCTGGTGATGAAA+AGG | - | chr2.1:15674232-15674251 | None:intergenic | 40.0% |
| ! | GAACAACTTGAGGTGAGTTT+TGG | + | chr2.1:15674664-15674683 | MS.gene35408:intron | 40.0% |
| ! | TTTTGTCCTCAACCAAACGA+CGG | + | chr2.1:15675084-15675103 | MS.gene35408:CDS | 40.0% |
| !! | CTTTCTCAAGCACTGATTGA+AGG | - | chr2.1:15674927-15674946 | None:intergenic | 40.0% |
| !! | GAGAGACTTTCTGAAACCAA+TGG | + | chr2.1:15674423-15674442 | MS.gene35408:CDS | 40.0% |
| !! | GGAAATGGTTCTAGTGATTC+AGG | + | chr2.1:15673853-15673872 | MS.gene35408:CDS | 40.0% |
| !!! | CTGCCACAGGTTTTGAATAT+TGG | - | chr2.1:15674860-15674879 | None:intergenic | 40.0% |
| AGGCACATGTTCCTTCAAAC+AGG | + | chr2.1:15673832-15673851 | MS.gene35408:CDS | 45.0% | |
| AGTTAATCAGTTAGGCGGAG+CGG | + | chr2.1:15673948-15673967 | MS.gene35408:CDS | 45.0% | |
| ATCGTCTGACCGATCACAAA+AGG | + | chr2.1:15675131-15675150 | MS.gene35408:CDS | 45.0% | |
| CAGCTAAGGATAGAAGCTCA+AGG | + | chr2.1:15674895-15674914 | MS.gene35408:CDS | 45.0% | |
| TATCAGATCCTCTACAGCGA+CGG | + | chr2.1:15674725-15674744 | MS.gene35408:intron | 45.0% | |
| AGGAACATGTGCCTCTCAGA+TGG | - | chr2.1:15673826-15673845 | None:intergenic | 50.0% | |
| AGTGTCTTTGTACCTGCCAC+AGG | - | chr2.1:15674873-15674892 | None:intergenic | 50.0% | |
| CGCGTTTGGATTCTCTGCAA+CGG | - | chr2.1:15674809-15674828 | None:intergenic | 50.0% | |
| GGACACCTGATCTTCATGCA+AGG | + | chr2.1:15673914-15673933 | MS.gene35408:CDS | 50.0% | |
| ATCGAGCCGTCGTTTGGTTG+AGG | - | chr2.1:15675093-15675112 | None:intergenic | 55.0% | |
| GGCGCTGCAAATGCAGATTG+AGG | + | chr2.1:15674624-15674643 | MS.gene35408:CDS | 55.0% | |
| TCAACCAAACGACGGCTCGA+TGG | + | chr2.1:15675092-15675111 | MS.gene35408:CDS | 55.0% | |
| TCTCTGCAACGGCTGCAGAA+CGG | - | chr2.1:15674798-15674817 | None:intergenic | 55.0% | |
| CAGCTCTACCGTCGCTGTAG+AGG | - | chr2.1:15674736-15674755 | None:intergenic | 60.0% | |
| CTGTCCATCGAGCCGTCGTT+TGG | - | chr2.1:15675099-15675118 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 15673814 | 15675533 | 15673814 | ID=MS.gene35408 |
| chr2.1 | mRNA | 15673814 | 15675533 | 15673814 | ID=MS.gene35408.t1;Parent=MS.gene35408 |
| chr2.1 | exon | 15673814 | 15673973 | 15673814 | ID=MS.gene35408.t1.exon1;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15673814 | 15673973 | 15673814 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| chr2.1 | exon | 15674089 | 15674165 | 15674089 | ID=MS.gene35408.t1.exon2;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15674089 | 15674165 | 15674089 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| chr2.1 | exon | 15674244 | 15674304 | 15674244 | ID=MS.gene35408.t1.exon3;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15674244 | 15674304 | 15674244 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| chr2.1 | exon | 15674397 | 15674496 | 15674397 | ID=MS.gene35408.t1.exon4;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15674397 | 15674496 | 15674397 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| chr2.1 | exon | 15674606 | 15674675 | 15674606 | ID=MS.gene35408.t1.exon5;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15674606 | 15674675 | 15674606 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| chr2.1 | exon | 15674880 | 15675533 | 15674880 | ID=MS.gene35408.t1.exon6;Parent=MS.gene35408.t1 |
| chr2.1 | CDS | 15674880 | 15675533 | 15674880 | ID=cds.MS.gene35408.t1;Parent=MS.gene35408.t1 |
| Gene Sequence |
| Protein sequence |
