Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07344.t1 | RHN80994.1 | 89.7 | 68 | 6 | 1 | 1 | 68 | 83 | 149 | 3.40E-25 | 123.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07344.t1 | A0A396JUP6 | 89.7 | 68 | 6 | 1 | 1 | 68 | 83 | 149 | 2.5e-25 | 123.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene07344 | 0.824255 | 8.91E-54 | -1.69E-46 |
MS.gene049159 | MS.gene07344 | 0.851384 | 9.19E-61 | -1.69E-46 |
MS.gene049178 | MS.gene07344 | 0.804072 | 2.58E-49 | -1.69E-46 |
MS.gene049254 | MS.gene07344 | 0.825909 | 3.62E-54 | -1.69E-46 |
MS.gene049378 | MS.gene07344 | 0.819872 | 9.24E-53 | -1.69E-46 |
MS.gene049404 | MS.gene07344 | 0.824634 | 7.26E-54 | -1.69E-46 |
MS.gene049435 | MS.gene07344 | 0.83881 | 2.31E-57 | -1.69E-46 |
MS.gene049452 | MS.gene07344 | 0.800027 | 1.75E-48 | -1.69E-46 |
MS.gene049501 | MS.gene07344 | 0.848597 | 5.54E-60 | -1.69E-46 |
MS.gene049567 | MS.gene07344 | 0.809673 | 1.68E-50 | -1.69E-46 |
MS.gene049647 | MS.gene07344 | 0.82536 | 4.89E-54 | -1.69E-46 |
MS.gene049669 | MS.gene07344 | 0.825384 | 4.83E-54 | -1.69E-46 |
MS.gene049756 | MS.gene07344 | 0.80665 | 7.42E-50 | -1.69E-46 |
MS.gene049821 | MS.gene07344 | 0.806459 | 8.14E-50 | -1.69E-46 |
MS.gene049850 | MS.gene07344 | 0.811049 | 8.50E-51 | -1.69E-46 |
MS.gene049958 | MS.gene07344 | 0.834469 | 2.94E-56 | -1.69E-46 |
MS.gene050020 | MS.gene07344 | 0.807427 | 5.08E-50 | -1.69E-46 |
MS.gene050137 | MS.gene07344 | 0.831081 | 2.04E-55 | -1.69E-46 |
MS.gene050139 | MS.gene07344 | 0.813786 | 2.15E-51 | -1.69E-46 |
MS.gene050156 | MS.gene07344 | 0.81047 | 1.13E-50 | -1.69E-46 |
MS.gene05016 | MS.gene07344 | 0.803862 | 2.85E-49 | -1.69E-46 |
MS.gene050226 | MS.gene07344 | 0.846207 | 2.51E-59 | -1.69E-46 |
MS.gene050227 | MS.gene07344 | 0.845817 | 3.21E-59 | -1.69E-46 |
MS.gene050228 | MS.gene07344 | 0.853465 | 2.35E-61 | -1.69E-46 |
MS.gene050303 | MS.gene07344 | 0.833262 | 5.90E-56 | -1.69E-46 |
MS.gene050355 | MS.gene07344 | 0.819188 | 1.32E-52 | -1.69E-46 |
MS.gene050438 | MS.gene07344 | 0.808858 | 2.52E-50 | -1.69E-46 |
MS.gene050442 | MS.gene07344 | 0.873286 | 1.65E-67 | -1.69E-46 |
MS.gene050605 | MS.gene07344 | 0.830434 | 2.94E-55 | -1.69E-46 |
MS.gene050623 | MS.gene07344 | -0.828959 | 6.73E-55 | -1.69E-46 |
MS.gene050642 | MS.gene07344 | 0.801239 | 9.89E-49 | -1.69E-46 |
MS.gene050680 | MS.gene07344 | 0.843675 | 1.21E-58 | -1.69E-46 |
MS.gene050719 | MS.gene07344 | 0.864377 | 1.27E-64 | -1.69E-46 |
MS.gene050721 | MS.gene07344 | 0.862156 | 6.19E-64 | -1.69E-46 |
MS.gene050724 | MS.gene07344 | 0.856423 | 3.25E-62 | -1.69E-46 |
MS.gene050750 | MS.gene07344 | 0.840888 | 6.63E-58 | -1.69E-46 |
MS.gene050759 | MS.gene07344 | 0.828968 | 6.69E-55 | -1.69E-46 |
MS.gene050780 | MS.gene07344 | 0.896693 | 2.89E-76 | -1.69E-46 |
MS.gene050807 | MS.gene07344 | 0.821567 | 3.77E-53 | -1.69E-46 |
MS.gene050815 | MS.gene07344 | 0.824739 | 6.86E-54 | -1.69E-46 |
MS.gene050820 | MS.gene07344 | 0.803919 | 2.77E-49 | -1.69E-46 |
MS.gene050826 | MS.gene07344 | 0.821759 | 3.40E-53 | -1.69E-46 |
MS.gene050844 | MS.gene07344 | 0.852687 | 3.92E-61 | -1.69E-46 |
MS.gene050953 | MS.gene07344 | 0.839729 | 1.33E-57 | -1.69E-46 |
MS.gene050962 | MS.gene07344 | 0.820308 | 7.35E-53 | -1.69E-46 |
MS.gene051180 | MS.gene07344 | 0.80376 | 2.99E-49 | -1.69E-46 |
MS.gene051198 | MS.gene07344 | 0.820733 | 5.87E-53 | -1.69E-46 |
MS.gene051207 | MS.gene07344 | 0.812441 | 4.23E-51 | -1.69E-46 |
MS.gene051210 | MS.gene07344 | 0.803739 | 3.02E-49 | -1.69E-46 |
MS.gene051247 | MS.gene07344 | 0.866056 | 3.77E-65 | -1.69E-46 |
MS.gene051265 | MS.gene07344 | 0.857253 | 1.85E-62 | -1.69E-46 |
MS.gene051344 | MS.gene07344 | 0.804055 | 2.60E-49 | -1.69E-46 |
MS.gene051370 | MS.gene07344 | 0.803605 | 3.22E-49 | -1.69E-46 |
MS.gene051452 | MS.gene07344 | 0.812269 | 4.62E-51 | -1.69E-46 |
MS.gene051490 | MS.gene07344 | 0.834815 | 2.41E-56 | -1.69E-46 |
MS.gene051492 | MS.gene07344 | 0.839479 | 1.55E-57 | -1.69E-46 |
MS.gene051719 | MS.gene07344 | 0.804855 | 1.77E-49 | -1.69E-46 |
MS.gene051744 | MS.gene07344 | 0.868545 | 6.03E-66 | -1.69E-46 |
MS.gene051789 | MS.gene07344 | 0.802288 | 6.02E-49 | -1.69E-46 |
MS.gene051935 | MS.gene07344 | 0.815937 | 7.16E-52 | -1.69E-46 |
MS.gene051975 | MS.gene07344 | 0.812771 | 3.59E-51 | -1.69E-46 |
MS.gene051983 | MS.gene07344 | 0.800915 | 1.15E-48 | -1.69E-46 |
MS.gene052012 | MS.gene07344 | 0.860436 | 2.07E-63 | -1.69E-46 |
MS.gene052020 | MS.gene07344 | 0.854055 | 1.59E-61 | -1.69E-46 |
MS.gene05215 | MS.gene07344 | 0.832068 | 1.17E-55 | -1.69E-46 |
MS.gene052176 | MS.gene07344 | 0.808564 | 2.91E-50 | -1.69E-46 |
MS.gene052190 | MS.gene07344 | 0.811136 | 8.14E-51 | -1.69E-46 |
MS.gene052208 | MS.gene07344 | 0.844727 | 6.32E-59 | -1.69E-46 |
MS.gene052286 | MS.gene07344 | 0.804105 | 2.53E-49 | -1.69E-46 |
MS.gene052323 | MS.gene07344 | 0.817902 | 2.59E-52 | -1.69E-46 |
MS.gene052333 | MS.gene07344 | 0.834711 | 2.56E-56 | -1.69E-46 |
MS.gene052376 | MS.gene07344 | 0.802551 | 5.32E-49 | -1.69E-46 |
MS.gene052384 | MS.gene07344 | 0.814948 | 1.19E-51 | -1.69E-46 |
MS.gene052426 | MS.gene07344 | 0.827153 | 1.83E-54 | -1.69E-46 |
MS.gene052519 | MS.gene07344 | 0.81719 | 3.75E-52 | -1.69E-46 |
MS.gene052582 | MS.gene07344 | 0.813127 | 3.00E-51 | -1.69E-46 |
MS.gene052584 | MS.gene07344 | 0.825326 | 4.98E-54 | -1.69E-46 |
MS.gene052586 | MS.gene07344 | 0.818225 | 2.19E-52 | -1.69E-46 |
MS.gene052611 | MS.gene07344 | 0.808278 | 3.35E-50 | -1.69E-46 |
MS.gene052665 | MS.gene07344 | 0.800784 | 1.23E-48 | -1.69E-46 |
MS.gene052698 | MS.gene07344 | 0.80243 | 5.63E-49 | -1.69E-46 |
MS.gene052773 | MS.gene07344 | 0.823613 | 1.26E-53 | -1.69E-46 |
MS.gene052863 | MS.gene07344 | 0.831387 | 1.72E-55 | -1.69E-46 |
MS.gene052867 | MS.gene07344 | 0.831063 | 2.06E-55 | -1.69E-46 |
MS.gene05288 | MS.gene07344 | 0.814451 | 1.53E-51 | -1.69E-46 |
MS.gene052896 | MS.gene07344 | 0.832833 | 7.54E-56 | -1.69E-46 |
MS.gene05289 | MS.gene07344 | 0.802963 | 4.37E-49 | -1.69E-46 |
MS.gene053006 | MS.gene07344 | 0.81608 | 6.65E-52 | -1.69E-46 |
MS.gene053008 | MS.gene07344 | 0.83366 | 4.69E-56 | -1.69E-46 |
MS.gene053054 | MS.gene07344 | -0.819727 | 9.98E-53 | -1.69E-46 |
MS.gene053074 | MS.gene07344 | 0.845108 | 4.99E-59 | -1.69E-46 |
MS.gene053147 | MS.gene07344 | 0.800141 | 1.66E-48 | -1.69E-46 |
MS.gene053166 | MS.gene07344 | 0.84781 | 9.13E-60 | -1.69E-46 |
MS.gene053184 | MS.gene07344 | 0.810894 | 9.19E-51 | -1.69E-46 |
MS.gene053226 | MS.gene07344 | 0.855563 | 5.80E-62 | -1.69E-46 |
MS.gene053296 | MS.gene07344 | 0.80673 | 7.14E-50 | -1.69E-46 |
MS.gene053584 | MS.gene07344 | 0.810077 | 1.38E-50 | -1.69E-46 |
MS.gene053641 | MS.gene07344 | 0.86956 | 2.83E-66 | -1.69E-46 |
MS.gene053643 | MS.gene07344 | 0.806654 | 7.40E-50 | -1.69E-46 |
MS.gene053647 | MS.gene07344 | 0.807706 | 4.43E-50 | -1.69E-46 |
MS.gene053962 | MS.gene07344 | 0.801582 | 8.41E-49 | -1.69E-46 |
MS.gene053966 | MS.gene07344 | 0.801925 | 7.15E-49 | -1.69E-46 |
MS.gene054083 | MS.gene07344 | 0.81602 | 6.86E-52 | -1.69E-46 |
MS.gene054093 | MS.gene07344 | 0.803809 | 2.92E-49 | -1.69E-46 |
MS.gene05410 | MS.gene07344 | 0.828176 | 1.04E-54 | -1.69E-46 |
MS.gene054139 | MS.gene07344 | 0.806236 | 9.07E-50 | -1.69E-46 |
MS.gene05414 | MS.gene07344 | 0.870174 | 1.78E-66 | -1.69E-46 |
MS.gene05415 | MS.gene07344 | 0.863282 | 2.78E-64 | -1.69E-46 |
MS.gene054160 | MS.gene07344 | 0.808226 | 3.44E-50 | -1.69E-46 |
MS.gene05417 | MS.gene07344 | 0.804295 | 2.31E-49 | -1.69E-46 |
MS.gene054184 | MS.gene07344 | 0.800556 | 1.36E-48 | -1.69E-46 |
MS.gene054185 | MS.gene07344 | 0.80453 | 2.07E-49 | -1.69E-46 |
MS.gene054236 | MS.gene07344 | 0.844819 | 5.97E-59 | -1.69E-46 |
MS.gene054291 | MS.gene07344 | -0.842847 | 2.01E-58 | -1.69E-46 |
MS.gene054379 | MS.gene07344 | 0.800258 | 1.57E-48 | -1.69E-46 |
MS.gene054405 | MS.gene07344 | 0.830699 | 2.54E-55 | -1.69E-46 |
MS.gene054433 | MS.gene07344 | 0.809933 | 1.48E-50 | -1.69E-46 |
MS.gene054467 | MS.gene07344 | 0.840616 | 7.81E-58 | -1.69E-46 |
MS.gene054468 | MS.gene07344 | 0.838653 | 2.53E-57 | -1.69E-46 |
MS.gene054472 | MS.gene07344 | 0.819428 | 1.17E-52 | -1.69E-46 |
MS.gene054559 | MS.gene07344 | 0.818553 | 1.85E-52 | -1.69E-46 |
MS.gene054576 | MS.gene07344 | 0.847741 | 9.54E-60 | -1.69E-46 |
MS.gene054596 | MS.gene07344 | 0.808737 | 2.67E-50 | -1.69E-46 |
MS.gene054651 | MS.gene07344 | 0.818652 | 1.75E-52 | -1.69E-46 |
MS.gene054657 | MS.gene07344 | 0.840257 | 9.69E-58 | -1.69E-46 |
MS.gene054658 | MS.gene07344 | 0.845134 | 4.91E-59 | -1.69E-46 |
MS.gene05468 | MS.gene07344 | 0.867507 | 1.30E-65 | -1.69E-46 |
MS.gene054775 | MS.gene07344 | 0.847816 | 9.10E-60 | -1.69E-46 |
MS.gene054875 | MS.gene07344 | 0.807014 | 6.22E-50 | -1.69E-46 |
MS.gene05510 | MS.gene07344 | 0.843944 | 1.03E-58 | -1.69E-46 |
MS.gene055166 | MS.gene07344 | 0.828679 | 7.86E-55 | -1.69E-46 |
MS.gene05517 | MS.gene07344 | 0.804473 | 2.12E-49 | -1.69E-46 |
MS.gene055222 | MS.gene07344 | 0.821068 | 4.91E-53 | -1.69E-46 |
MS.gene055227 | MS.gene07344 | 0.833689 | 4.62E-56 | -1.69E-46 |
MS.gene055228 | MS.gene07344 | 0.814606 | 1.41E-51 | -1.69E-46 |
MS.gene055356 | MS.gene07344 | 0.831976 | 1.23E-55 | -1.69E-46 |
MS.gene055357 | MS.gene07344 | 0.846806 | 1.72E-59 | -1.69E-46 |
MS.gene055358 | MS.gene07344 | 0.83595 | 1.25E-56 | -1.69E-46 |
MS.gene055359 | MS.gene07344 | 0.801622 | 8.25E-49 | -1.69E-46 |
MS.gene055466 | MS.gene07344 | 0.810731 | 9.96E-51 | -1.69E-46 |
MS.gene055512 | MS.gene07344 | 0.800615 | 1.33E-48 | -1.69E-46 |
MS.gene055586 | MS.gene07344 | 0.807927 | 3.98E-50 | -1.69E-46 |
MS.gene055608 | MS.gene07344 | 0.813266 | 2.79E-51 | -1.69E-46 |
MS.gene055623 | MS.gene07344 | 0.847042 | 1.48E-59 | -1.69E-46 |
MS.gene055701 | MS.gene07344 | 0.864642 | 1.05E-64 | -1.69E-46 |
MS.gene055778 | MS.gene07344 | 0.855726 | 5.20E-62 | -1.69E-46 |
MS.gene055818 | MS.gene07344 | 0.872057 | 4.26E-67 | -1.69E-46 |
MS.gene055926 | MS.gene07344 | 0.844385 | 7.81E-59 | -1.69E-46 |
MS.gene05604 | MS.gene07344 | 0.840799 | 6.99E-58 | -1.69E-46 |
MS.gene056162 | MS.gene07344 | 0.828531 | 8.54E-55 | -1.69E-46 |
MS.gene056173 | MS.gene07344 | 0.830557 | 2.75E-55 | -1.69E-46 |
MS.gene056174 | MS.gene07344 | 0.831155 | 1.96E-55 | -1.69E-46 |
MS.gene056215 | MS.gene07344 | 0.808584 | 2.88E-50 | -1.69E-46 |
MS.gene056366 | MS.gene07344 | 0.829122 | 6.14E-55 | -1.69E-46 |
MS.gene056373 | MS.gene07344 | 0.822667 | 2.10E-53 | -1.69E-46 |
MS.gene056498 | MS.gene07344 | 0.826572 | 2.52E-54 | -1.69E-46 |
MS.gene056506 | MS.gene07344 | 0.867081 | 1.78E-65 | -1.69E-46 |
MS.gene056552 | MS.gene07344 | 0.819919 | 9.02E-53 | -1.69E-46 |
MS.gene056553 | MS.gene07344 | 0.812676 | 3.76E-51 | -1.69E-46 |
MS.gene056595 | MS.gene07344 | 0.804292 | 2.32E-49 | -1.69E-46 |
MS.gene05659 | MS.gene07344 | 0.803456 | 3.46E-49 | -1.69E-46 |
MS.gene056760 | MS.gene07344 | 0.81002 | 1.42E-50 | -1.69E-46 |
MS.gene057012 | MS.gene07344 | 0.820527 | 6.55E-53 | -1.69E-46 |
MS.gene057026 | MS.gene07344 | 0.845344 | 4.31E-59 | -1.69E-46 |
MS.gene057027 | MS.gene07344 | 0.801205 | 1.01E-48 | -1.69E-46 |
MS.gene057060 | MS.gene07344 | 0.856205 | 3.76E-62 | -1.69E-46 |
MS.gene057194 | MS.gene07344 | 0.801474 | 8.85E-49 | -1.69E-46 |
MS.gene057208 | MS.gene07344 | 0.821548 | 3.81E-53 | -1.69E-46 |
MS.gene057314 | MS.gene07344 | 0.807923 | 3.99E-50 | -1.69E-46 |
MS.gene057395 | MS.gene07344 | 0.812658 | 3.79E-51 | -1.69E-46 |
MS.gene057414 | MS.gene07344 | 0.805566 | 1.25E-49 | -1.69E-46 |
MS.gene057444 | MS.gene07344 | 0.828662 | 7.94E-55 | -1.69E-46 |
MS.gene05761 | MS.gene07344 | 0.822494 | 2.30E-53 | -1.69E-46 |
MS.gene057693 | MS.gene07344 | 0.864386 | 1.26E-64 | -1.69E-46 |
MS.gene057869 | MS.gene07344 | 0.832481 | 9.23E-56 | -1.69E-46 |
MS.gene057915 | MS.gene07344 | 0.849071 | 4.09E-60 | -1.69E-46 |
MS.gene058010 | MS.gene07344 | 0.804128 | 2.51E-49 | -1.69E-46 |
MS.gene058037 | MS.gene07344 | 0.811427 | 7.04E-51 | -1.69E-46 |
MS.gene058084 | MS.gene07344 | 0.826931 | 2.07E-54 | -1.69E-46 |
MS.gene058146 | MS.gene07344 | 0.853572 | 2.19E-61 | -1.69E-46 |
MS.gene058168 | MS.gene07344 | 0.866458 | 2.81E-65 | -1.69E-46 |
MS.gene058426 | MS.gene07344 | 0.825464 | 4.62E-54 | -1.69E-46 |
MS.gene058477 | MS.gene07344 | 0.838836 | 2.27E-57 | -1.69E-46 |
MS.gene05847 | MS.gene07344 | 0.823819 | 1.13E-53 | -1.69E-46 |
MS.gene058548 | MS.gene07344 | 0.823573 | 1.29E-53 | -1.69E-46 |
MS.gene058595 | MS.gene07344 | 0.812828 | 3.48E-51 | -1.69E-46 |
MS.gene058625 | MS.gene07344 | 0.813804 | 2.13E-51 | -1.69E-46 |
MS.gene058636 | MS.gene07344 | 0.835045 | 2.11E-56 | -1.69E-46 |
MS.gene058829 | MS.gene07344 | 0.815435 | 9.26E-52 | -1.69E-46 |
MS.gene058906 | MS.gene07344 | 0.801795 | 7.61E-49 | -1.69E-46 |
MS.gene058979 | MS.gene07344 | 0.842937 | 1.91E-58 | -1.69E-46 |
MS.gene059006 | MS.gene07344 | 0.829381 | 5.31E-55 | -1.69E-46 |
MS.gene059124 | MS.gene07344 | 0.831176 | 1.94E-55 | -1.69E-46 |
MS.gene059128 | MS.gene07344 | 0.821115 | 4.79E-53 | -1.69E-46 |
MS.gene059161 | MS.gene07344 | 0.842366 | 2.70E-58 | -1.69E-46 |
MS.gene059249 | MS.gene07344 | 0.819818 | 9.51E-53 | -1.69E-46 |
MS.gene059283 | MS.gene07344 | 0.804484 | 2.11E-49 | -1.69E-46 |
MS.gene059382 | MS.gene07344 | 0.823673 | 1.22E-53 | -1.69E-46 |
MS.gene05954 | MS.gene07344 | 0.817799 | 2.73E-52 | -1.69E-46 |
MS.gene059550 | MS.gene07344 | 0.803796 | 2.94E-49 | -1.69E-46 |
MS.gene059569 | MS.gene07344 | 0.808138 | 3.59E-50 | -1.69E-46 |
MS.gene059584 | MS.gene07344 | 0.800186 | 1.62E-48 | -1.69E-46 |
MS.gene059609 | MS.gene07344 | 0.841584 | 4.35E-58 | -1.69E-46 |
MS.gene059725 | MS.gene07344 | 0.826633 | 2.44E-54 | -1.69E-46 |
MS.gene059789 | MS.gene07344 | 0.826615 | 2.46E-54 | -1.69E-46 |
MS.gene05979 | MS.gene07344 | 0.815251 | 1.02E-51 | -1.69E-46 |
MS.gene059830 | MS.gene07344 | 0.80487 | 1.76E-49 | -1.69E-46 |
MS.gene059842 | MS.gene07344 | 0.826805 | 2.22E-54 | -1.69E-46 |
MS.gene059937 | MS.gene07344 | 0.810491 | 1.12E-50 | -1.69E-46 |
MS.gene060011 | MS.gene07344 | 0.814613 | 1.41E-51 | -1.69E-46 |
MS.gene060137 | MS.gene07344 | -0.837432 | 5.22E-57 | -1.69E-46 |
MS.gene060167 | MS.gene07344 | 0.800687 | 1.28E-48 | -1.69E-46 |
MS.gene060310 | MS.gene07344 | 0.818545 | 1.85E-52 | -1.69E-46 |
MS.gene060322 | MS.gene07344 | 0.865288 | 6.58E-65 | -1.69E-46 |
MS.gene060373 | MS.gene07344 | 0.809591 | 1.75E-50 | -1.69E-46 |
MS.gene060429 | MS.gene07344 | 0.82803 | 1.13E-54 | -1.69E-46 |
MS.gene060521 | MS.gene07344 | 0.800848 | 1.19E-48 | -1.69E-46 |
MS.gene060553 | MS.gene07344 | 0.806782 | 6.96E-50 | -1.69E-46 |
MS.gene060572 | MS.gene07344 | 0.857643 | 1.42E-62 | -1.69E-46 |
MS.gene060637 | MS.gene07344 | 0.818535 | 1.86E-52 | -1.69E-46 |
MS.gene060683 | MS.gene07344 | 0.841752 | 3.93E-58 | -1.69E-46 |
MS.gene060685 | MS.gene07344 | 0.842136 | 3.11E-58 | -1.69E-46 |
MS.gene060781 | MS.gene07344 | 0.817919 | 2.57E-52 | -1.69E-46 |
MS.gene060802 | MS.gene07344 | 0.862135 | 6.28E-64 | -1.69E-46 |
MS.gene060803 | MS.gene07344 | 0.877583 | 5.59E-69 | -1.69E-46 |
MS.gene060907 | MS.gene07344 | 0.812138 | 4.93E-51 | -1.69E-46 |
MS.gene060918 | MS.gene07344 | 0.810388 | 1.18E-50 | -1.69E-46 |
MS.gene060998 | MS.gene07344 | 0.864553 | 1.12E-64 | -1.69E-46 |
MS.gene061040 | MS.gene07344 | -0.829648 | 4.58E-55 | -1.69E-46 |
MS.gene061114 | MS.gene07344 | -0.802408 | 5.69E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07344.t1 | MTR_1g086430 | 85.484 | 62 | 8 | 1 | 1 | 62 | 38 | 98 | 6.75e-33 | 109 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 11 sgRNAs with CRISPR-Local
Find 11 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAATGAGTGAAAATATTA+AGG | 0.307429 | 1.2:+65104399 | MS.gene07344:CDS |
GAGGAAGATGACACGGAAAA+AGG | 0.323663 | 1.2:+65104529 | MS.gene07344:CDS |
AAAATAAAGTTGTTGGTGTT+TGG | 0.337332 | 1.2:+65104425 | MS.gene07344:CDS |
AAGGAAGAAAATAAAGTTGT+TGG | 0.406793 | 1.2:+65104418 | MS.gene07344:CDS |
CTTGAAGATTTCGCTGAAGA+GGG | 0.506298 | 1.2:+65104463 | MS.gene07344:CDS |
ACTTGAAGATTTCGCTGAAG+AGG | 0.542202 | 1.2:+65104462 | MS.gene07344:CDS |
TGCGTGAGACACGTGAGCGT+TGG | 0.555623 | 1.2:+65104371 | MS.gene07344:CDS |
TAACTGTGCTAATATTCTTG+AGG | 0.568361 | 1.2:+65104510 | MS.gene07344:CDS |
AAATCTTCAAGTTTAAACGT+TGG | 0.594153 | 1.2:-65104451 | None:intergenic |
GAAGATTTCGCTGAAGAGGG+TGG | 0.633634 | 1.2:+65104466 | MS.gene07344:CDS |
TATTCTTGAGGAAGATGACA+CGG | 0.661009 | 1.2:+65104522 | MS.gene07344:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAATGAGTGAAAATATTA+AGG | + | chr1.2:65104399-65104418 | MS.gene07344:CDS | 20.0% |
! | AAGGAAGAAAATAAAGTTGT+TGG | + | chr1.2:65104418-65104437 | MS.gene07344:CDS | 25.0% |
!! | AAAATAAAGTTGTTGGTGTT+TGG | + | chr1.2:65104425-65104444 | MS.gene07344:CDS | 25.0% |
!! | AAATCTTCAAGTTTAAACGT+TGG | - | chr1.2:65104454-65104473 | None:intergenic | 25.0% |
TAACTGTGCTAATATTCTTG+AGG | + | chr1.2:65104510-65104529 | MS.gene07344:CDS | 30.0% | |
TATTCTTGAGGAAGATGACA+CGG | + | chr1.2:65104522-65104541 | MS.gene07344:CDS | 35.0% | |
ACTTGAAGATTTCGCTGAAG+AGG | + | chr1.2:65104462-65104481 | MS.gene07344:CDS | 40.0% | |
CTTGAAGATTTCGCTGAAGA+GGG | + | chr1.2:65104463-65104482 | MS.gene07344:CDS | 40.0% | |
GAGGAAGATGACACGGAAAA+AGG | + | chr1.2:65104529-65104548 | MS.gene07344:CDS | 45.0% | |
GAAGATTTCGCTGAAGAGGG+TGG | + | chr1.2:65104466-65104485 | MS.gene07344:CDS | 50.0% | |
TGCGTGAGACACGTGAGCGT+TGG | + | chr1.2:65104371-65104390 | MS.gene07344:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 65104370 | 65104576 | 65104370 | ID=MS.gene07344 |
chr1.2 | mRNA | 65104370 | 65104576 | 65104370 | ID=MS.gene07344.t1;Parent=MS.gene07344 |
chr1.2 | exon | 65104370 | 65104576 | 65104370 | ID=MS.gene07344.t1.exon1;Parent=MS.gene07344.t1 |
chr1.2 | CDS | 65104370 | 65104576 | 65104370 | ID=cds.MS.gene07344.t1;Parent=MS.gene07344.t1 |
Gene Sequence |
Protein sequence |