Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25151.t1 | XP_024629113.1 | 98.2 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 5.20E-50 | 206.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25151.t1 | Q570U6 | 70.8 | 113 | 33 | 0 | 1 | 113 | 1 | 113 | 2.1e-36 | 152.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25151.t1 | C6ZKI2 | 98.2 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 3.7e-50 | 206.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene25151 | 0.820231 | 7.65E-53 | -1.69E-46 |
MS.gene049159 | MS.gene25151 | 0.820194 | 7.80E-53 | -1.69E-46 |
MS.gene049254 | MS.gene25151 | 0.881894 | 1.64E-70 | -1.69E-46 |
MS.gene049272 | MS.gene25151 | 0.826631 | 2.44E-54 | -1.69E-46 |
MS.gene049378 | MS.gene25151 | 0.823756 | 1.17E-53 | -1.69E-46 |
MS.gene049404 | MS.gene25151 | 0.815903 | 7.28E-52 | -1.69E-46 |
MS.gene049419 | MS.gene25151 | -0.809914 | 1.49E-50 | -1.69E-46 |
MS.gene049435 | MS.gene25151 | 0.837036 | 6.58E-57 | -1.69E-46 |
MS.gene049452 | MS.gene25151 | 0.833059 | 6.63E-56 | -1.69E-46 |
MS.gene049499 | MS.gene25151 | 0.800131 | 1.66E-48 | -1.69E-46 |
MS.gene049567 | MS.gene25151 | 0.808247 | 3.40E-50 | -1.69E-46 |
MS.gene049647 | MS.gene25151 | 0.826652 | 2.41E-54 | -1.69E-46 |
MS.gene049669 | MS.gene25151 | 0.844151 | 9.03E-59 | -1.69E-46 |
MS.gene049983 | MS.gene25151 | 0.823275 | 1.51E-53 | -1.69E-46 |
MS.gene050026 | MS.gene25151 | 0.837344 | 5.49E-57 | -1.69E-46 |
MS.gene050029 | MS.gene25151 | 0.811224 | 7.79E-51 | -1.69E-46 |
MS.gene050073 | MS.gene25151 | 0.802922 | 4.46E-49 | -1.69E-46 |
MS.gene050105 | MS.gene25151 | 0.812985 | 3.22E-51 | -1.69E-46 |
MS.gene050156 | MS.gene25151 | 0.807571 | 4.74E-50 | -1.69E-46 |
MS.gene050273 | MS.gene25151 | 0.81404 | 1.89E-51 | -1.69E-46 |
MS.gene050355 | MS.gene25151 | 0.839635 | 1.41E-57 | -1.69E-46 |
MS.gene050442 | MS.gene25151 | 0.862161 | 6.16E-64 | -1.69E-46 |
MS.gene050559 | MS.gene25151 | 0.835418 | 1.70E-56 | -1.69E-46 |
MS.gene050561 | MS.gene25151 | 0.83953 | 1.50E-57 | -1.69E-46 |
MS.gene050562 | MS.gene25151 | 0.830157 | 3.44E-55 | -1.69E-46 |
MS.gene050605 | MS.gene25151 | 0.814662 | 1.37E-51 | -1.69E-46 |
MS.gene050680 | MS.gene25151 | 0.813267 | 2.79E-51 | -1.69E-46 |
MS.gene050719 | MS.gene25151 | 0.815029 | 1.14E-51 | -1.69E-46 |
MS.gene050721 | MS.gene25151 | 0.813809 | 2.12E-51 | -1.69E-46 |
MS.gene050724 | MS.gene25151 | 0.806195 | 9.25E-50 | -1.69E-46 |
MS.gene050750 | MS.gene25151 | 0.828561 | 8.39E-55 | -1.69E-46 |
MS.gene050759 | MS.gene25151 | 0.816604 | 5.08E-52 | -1.69E-46 |
MS.gene050826 | MS.gene25151 | 0.829871 | 4.04E-55 | -1.69E-46 |
MS.gene050844 | MS.gene25151 | 0.808635 | 2.81E-50 | -1.69E-46 |
MS.gene050953 | MS.gene25151 | 0.831675 | 1.46E-55 | -1.69E-46 |
MS.gene050962 | MS.gene25151 | 0.803479 | 3.42E-49 | -1.69E-46 |
MS.gene051122 | MS.gene25151 | 0.811307 | 7.48E-51 | -1.69E-46 |
MS.gene051147 | MS.gene25151 | 0.82913 | 6.12E-55 | -1.69E-46 |
MS.gene051181 | MS.gene25151 | 0.82072 | 5.91E-53 | -1.69E-46 |
MS.gene051190 | MS.gene25151 | 0.809795 | 1.59E-50 | -1.69E-46 |
MS.gene051198 | MS.gene25151 | 0.8314 | 1.71E-55 | -1.69E-46 |
MS.gene051247 | MS.gene25151 | 0.808944 | 2.41E-50 | -1.69E-46 |
MS.gene051279 | MS.gene25151 | 0.825811 | 3.82E-54 | -1.69E-46 |
MS.gene051332 | MS.gene25151 | 0.834359 | 3.14E-56 | -1.69E-46 |
MS.gene051368 | MS.gene25151 | 0.85764 | 1.42E-62 | -1.69E-46 |
MS.gene051490 | MS.gene25151 | 0.804734 | 1.87E-49 | -1.69E-46 |
MS.gene051594 | MS.gene25151 | 0.806808 | 6.87E-50 | -1.69E-46 |
MS.gene051744 | MS.gene25151 | 0.828062 | 1.11E-54 | -1.69E-46 |
MS.gene051800 | MS.gene25151 | 0.82655 | 2.55E-54 | -1.69E-46 |
MS.gene051924 | MS.gene25151 | -0.840184 | 1.01E-57 | -1.69E-46 |
MS.gene051926 | MS.gene25151 | -0.83234 | 1.00E-55 | -1.69E-46 |
MS.gene051935 | MS.gene25151 | 0.804103 | 2.54E-49 | -1.69E-46 |
MS.gene051957 | MS.gene25151 | 0.802386 | 5.75E-49 | -1.69E-46 |
MS.gene052012 | MS.gene25151 | 0.803032 | 4.23E-49 | -1.69E-46 |
MS.gene052037 | MS.gene25151 | 0.806713 | 7.20E-50 | -1.69E-46 |
MS.gene052042 | MS.gene25151 | 0.803037 | 4.22E-49 | -1.69E-46 |
MS.gene052190 | MS.gene25151 | 0.833302 | 5.77E-56 | -1.69E-46 |
MS.gene052208 | MS.gene25151 | 0.805643 | 1.21E-49 | -1.69E-46 |
MS.gene052333 | MS.gene25151 | 0.88024 | 6.46E-70 | -1.69E-46 |
MS.gene052389 | MS.gene25151 | 0.815688 | 8.13E-52 | -1.69E-46 |
MS.gene052463 | MS.gene25151 | 0.828726 | 7.66E-55 | -1.69E-46 |
MS.gene052464 | MS.gene25151 | 0.802873 | 4.56E-49 | -1.69E-46 |
MS.gene052493 | MS.gene25151 | 0.839436 | 1.59E-57 | -1.69E-46 |
MS.gene052516 | MS.gene25151 | 0.800902 | 1.16E-48 | -1.69E-46 |
MS.gene052519 | MS.gene25151 | 0.814543 | 1.46E-51 | -1.69E-46 |
MS.gene052534 | MS.gene25151 | 0.852779 | 3.69E-61 | -1.69E-46 |
MS.gene052582 | MS.gene25151 | 0.834986 | 2.18E-56 | -1.69E-46 |
MS.gene052584 | MS.gene25151 | 0.833716 | 4.54E-56 | -1.69E-46 |
MS.gene052586 | MS.gene25151 | 0.865837 | 4.42E-65 | -1.69E-46 |
MS.gene052674 | MS.gene25151 | 0.860897 | 1.50E-63 | -1.69E-46 |
MS.gene052675 | MS.gene25151 | 0.857592 | 1.47E-62 | -1.69E-46 |
MS.gene052677 | MS.gene25151 | 0.859943 | 2.91E-63 | -1.69E-46 |
MS.gene052685 | MS.gene25151 | 0.803817 | 2.91E-49 | -1.69E-46 |
MS.gene052773 | MS.gene25151 | 0.828507 | 8.65E-55 | -1.69E-46 |
MS.gene052863 | MS.gene25151 | 0.810117 | 1.35E-50 | -1.69E-46 |
MS.gene052867 | MS.gene25151 | 0.818761 | 1.66E-52 | -1.69E-46 |
MS.gene052954 | MS.gene25151 | 0.816422 | 5.58E-52 | -1.69E-46 |
MS.gene053006 | MS.gene25151 | 0.829251 | 5.72E-55 | -1.69E-46 |
MS.gene053008 | MS.gene25151 | 0.816555 | 5.21E-52 | -1.69E-46 |
MS.gene053166 | MS.gene25151 | 0.865347 | 6.31E-65 | -1.69E-46 |
MS.gene053201 | MS.gene25151 | 0.808558 | 2.92E-50 | -1.69E-46 |
MS.gene053226 | MS.gene25151 | 0.826653 | 2.41E-54 | -1.69E-46 |
MS.gene05350 | MS.gene25151 | 0.800039 | 1.74E-48 | -1.69E-46 |
MS.gene053621 | MS.gene25151 | 0.80313 | 4.04E-49 | -1.69E-46 |
MS.gene053647 | MS.gene25151 | 0.815727 | 7.97E-52 | -1.69E-46 |
MS.gene053998 | MS.gene25151 | 0.800835 | 1.20E-48 | -1.69E-46 |
MS.gene05414 | MS.gene25151 | 0.834713 | 2.56E-56 | -1.69E-46 |
MS.gene05415 | MS.gene25151 | 0.866161 | 3.49E-65 | -1.69E-46 |
MS.gene054160 | MS.gene25151 | 0.802342 | 5.87E-49 | -1.69E-46 |
MS.gene054236 | MS.gene25151 | 0.852356 | 4.87E-61 | -1.69E-46 |
MS.gene05423 | MS.gene25151 | 0.827985 | 1.16E-54 | -1.69E-46 |
MS.gene054291 | MS.gene25151 | -0.871662 | 5.76E-67 | -1.69E-46 |
MS.gene054405 | MS.gene25151 | 0.826586 | 2.50E-54 | -1.69E-46 |
MS.gene054467 | MS.gene25151 | 0.846158 | 2.59E-59 | -1.69E-46 |
MS.gene054468 | MS.gene25151 | 0.876239 | 1.63E-68 | -1.69E-46 |
MS.gene054472 | MS.gene25151 | 0.801016 | 1.10E-48 | -1.69E-46 |
MS.gene054479 | MS.gene25151 | 0.862357 | 5.37E-64 | -1.69E-46 |
MS.gene054559 | MS.gene25151 | 0.847017 | 1.51E-59 | -1.69E-46 |
MS.gene054576 | MS.gene25151 | 0.83725 | 5.81E-57 | -1.69E-46 |
MS.gene054651 | MS.gene25151 | 0.838651 | 2.53E-57 | -1.69E-46 |
MS.gene054657 | MS.gene25151 | 0.804219 | 2.40E-49 | -1.69E-46 |
MS.gene054775 | MS.gene25151 | 0.831821 | 1.34E-55 | -1.69E-46 |
MS.gene054991 | MS.gene25151 | 0.81812 | 2.31E-52 | -1.69E-46 |
MS.gene055166 | MS.gene25151 | 0.83094 | 2.21E-55 | -1.69E-46 |
MS.gene055227 | MS.gene25151 | 0.835954 | 1.24E-56 | -1.69E-46 |
MS.gene055228 | MS.gene25151 | 0.834422 | 3.03E-56 | -1.69E-46 |
MS.gene055230 | MS.gene25151 | 0.803404 | 3.54E-49 | -1.69E-46 |
MS.gene055367 | MS.gene25151 | 0.801941 | 7.10E-49 | -1.69E-46 |
MS.gene055586 | MS.gene25151 | 0.832116 | 1.14E-55 | -1.69E-46 |
MS.gene055589 | MS.gene25151 | 0.803365 | 3.61E-49 | -1.69E-46 |
MS.gene055623 | MS.gene25151 | 0.803627 | 3.19E-49 | -1.69E-46 |
MS.gene055701 | MS.gene25151 | 0.867915 | 9.62E-66 | -1.69E-46 |
MS.gene055724 | MS.gene25151 | 0.816846 | 4.48E-52 | -1.69E-46 |
MS.gene055778 | MS.gene25151 | 0.812637 | 3.83E-51 | -1.69E-46 |
MS.gene055818 | MS.gene25151 | 0.852138 | 5.62E-61 | -1.69E-46 |
MS.gene055841 | MS.gene25151 | 0.810311 | 1.23E-50 | -1.69E-46 |
MS.gene055864 | MS.gene25151 | 0.80974 | 1.63E-50 | -1.69E-46 |
MS.gene055926 | MS.gene25151 | 0.832937 | 7.11E-56 | -1.69E-46 |
MS.gene05604 | MS.gene25151 | 0.840443 | 8.67E-58 | -1.69E-46 |
MS.gene056050 | MS.gene25151 | 0.814863 | 1.24E-51 | -1.69E-46 |
MS.gene056162 | MS.gene25151 | 0.844589 | 6.89E-59 | -1.69E-46 |
MS.gene056173 | MS.gene25151 | 0.802423 | 5.65E-49 | -1.69E-46 |
MS.gene056174 | MS.gene25151 | 0.861219 | 1.20E-63 | -1.69E-46 |
MS.gene056252 | MS.gene25151 | 0.814354 | 1.61E-51 | -1.69E-46 |
MS.gene056373 | MS.gene25151 | 0.812186 | 4.81E-51 | -1.69E-46 |
MS.gene056480 | MS.gene25151 | 0.832052 | 1.18E-55 | -1.69E-46 |
MS.gene056506 | MS.gene25151 | 0.861077 | 1.32E-63 | -1.69E-46 |
MS.gene056595 | MS.gene25151 | 0.813099 | 3.04E-51 | -1.69E-46 |
MS.gene05659 | MS.gene25151 | 0.821685 | 3.54E-53 | -1.69E-46 |
MS.gene056776 | MS.gene25151 | 0.826822 | 2.20E-54 | -1.69E-46 |
MS.gene056779 | MS.gene25151 | 0.85557 | 5.77E-62 | -1.69E-46 |
MS.gene05686 | MS.gene25151 | 0.82152 | 3.86E-53 | -1.69E-46 |
MS.gene056873 | MS.gene25151 | 0.80984 | 1.55E-50 | -1.69E-46 |
MS.gene05690 | MS.gene25151 | 0.827209 | 1.78E-54 | -1.69E-46 |
MS.gene057012 | MS.gene25151 | 0.810272 | 1.25E-50 | -1.69E-46 |
MS.gene057026 | MS.gene25151 | 0.868288 | 7.30E-66 | -1.69E-46 |
MS.gene057027 | MS.gene25151 | 0.802876 | 4.56E-49 | -1.69E-46 |
MS.gene057156 | MS.gene25151 | -0.858026 | 1.09E-62 | -1.69E-46 |
MS.gene057194 | MS.gene25151 | 0.826604 | 2.48E-54 | -1.69E-46 |
MS.gene057208 | MS.gene25151 | 0.842632 | 2.30E-58 | -1.69E-46 |
MS.gene057444 | MS.gene25151 | 0.810919 | 9.07E-51 | -1.69E-46 |
MS.gene057598 | MS.gene25151 | 0.841509 | 4.55E-58 | -1.69E-46 |
MS.gene057611 | MS.gene25151 | 0.814879 | 1.23E-51 | -1.69E-46 |
MS.gene05761 | MS.gene25151 | 0.819662 | 1.03E-52 | -1.69E-46 |
MS.gene057855 | MS.gene25151 | 0.813505 | 2.47E-51 | -1.69E-46 |
MS.gene057869 | MS.gene25151 | 0.816459 | 5.47E-52 | -1.69E-46 |
MS.gene057915 | MS.gene25151 | 0.81845 | 1.95E-52 | -1.69E-46 |
MS.gene057921 | MS.gene25151 | 0.808635 | 2.81E-50 | -1.69E-46 |
MS.gene058009 | MS.gene25151 | 0.802829 | 4.66E-49 | -1.69E-46 |
MS.gene058010 | MS.gene25151 | 0.831153 | 1.96E-55 | -1.69E-46 |
MS.gene058037 | MS.gene25151 | 0.828576 | 8.33E-55 | -1.69E-46 |
MS.gene058081 | MS.gene25151 | 0.819193 | 1.32E-52 | -1.69E-46 |
MS.gene058223 | MS.gene25151 | -0.827655 | 1.39E-54 | -1.69E-46 |
MS.gene058294 | MS.gene25151 | 0.826013 | 3.42E-54 | -1.69E-46 |
MS.gene058502 | MS.gene25151 | 0.811997 | 5.29E-51 | -1.69E-46 |
MS.gene058548 | MS.gene25151 | 0.823831 | 1.12E-53 | -1.69E-46 |
MS.gene058595 | MS.gene25151 | 0.801318 | 9.53E-49 | -1.69E-46 |
MS.gene058625 | MS.gene25151 | 0.846533 | 2.05E-59 | -1.69E-46 |
MS.gene058783 | MS.gene25151 | 0.818079 | 2.36E-52 | -1.69E-46 |
MS.gene058979 | MS.gene25151 | 0.880226 | 6.53E-70 | -1.69E-46 |
MS.gene05897 | MS.gene25151 | 0.820334 | 7.25E-53 | -1.69E-46 |
MS.gene059161 | MS.gene25151 | 0.816971 | 4.20E-52 | -1.69E-46 |
MS.gene059272 | MS.gene25151 | 0.827872 | 1.23E-54 | -1.69E-46 |
MS.gene059283 | MS.gene25151 | 0.835697 | 1.44E-56 | -1.69E-46 |
MS.gene059382 | MS.gene25151 | 0.803511 | 3.37E-49 | -1.69E-46 |
MS.gene059438 | MS.gene25151 | 0.804383 | 2.22E-49 | -1.69E-46 |
MS.gene059439 | MS.gene25151 | 0.819929 | 8.97E-53 | -1.69E-46 |
MS.gene059440 | MS.gene25151 | 0.814744 | 1.32E-51 | -1.69E-46 |
MS.gene059550 | MS.gene25151 | 0.813989 | 1.94E-51 | -1.69E-46 |
MS.gene059570 | MS.gene25151 | 0.807844 | 4.15E-50 | -1.69E-46 |
MS.gene059584 | MS.gene25151 | 0.831515 | 1.60E-55 | -1.69E-46 |
MS.gene059625 | MS.gene25151 | 0.805745 | 1.15E-49 | -1.69E-46 |
MS.gene059842 | MS.gene25151 | 0.801045 | 1.08E-48 | -1.69E-46 |
MS.gene059952 | MS.gene25151 | 0.831128 | 1.99E-55 | -1.69E-46 |
MS.gene060011 | MS.gene25151 | 0.868705 | 5.35E-66 | -1.69E-46 |
MS.gene060167 | MS.gene25151 | 0.843439 | 1.40E-58 | -1.69E-46 |
MS.gene060271 | MS.gene25151 | 0.802528 | 5.38E-49 | -1.69E-46 |
MS.gene060322 | MS.gene25151 | 0.869312 | 3.40E-66 | -1.69E-46 |
MS.gene060373 | MS.gene25151 | 0.840112 | 1.06E-57 | -1.69E-46 |
MS.gene060435 | MS.gene25151 | 0.808848 | 2.53E-50 | -1.69E-46 |
MS.gene060520 | MS.gene25151 | 0.802284 | 6.04E-49 | -1.69E-46 |
MS.gene060521 | MS.gene25151 | 0.830297 | 3.18E-55 | -1.69E-46 |
MS.gene06052 | MS.gene25151 | 0.884578 | 1.70E-71 | -1.69E-46 |
MS.gene060572 | MS.gene25151 | 0.813463 | 2.53E-51 | -1.69E-46 |
MS.gene060683 | MS.gene25151 | 0.811046 | 8.51E-51 | -1.69E-46 |
MS.gene060685 | MS.gene25151 | 0.815449 | 9.19E-52 | -1.69E-46 |
MS.gene060781 | MS.gene25151 | 0.816864 | 4.44E-52 | -1.69E-46 |
MS.gene060802 | MS.gene25151 | 0.813353 | 2.67E-51 | -1.69E-46 |
MS.gene060803 | MS.gene25151 | 0.801823 | 7.51E-49 | -1.69E-46 |
MS.gene060840 | MS.gene25151 | 0.816338 | 5.82E-52 | -1.69E-46 |
MS.gene060850 | MS.gene25151 | 0.812227 | 4.71E-51 | -1.69E-46 |
MS.gene060851 | MS.gene25151 | 0.809973 | 1.45E-50 | -1.69E-46 |
MS.gene060852 | MS.gene25151 | 0.81128 | 7.58E-51 | -1.69E-46 |
MS.gene060879 | MS.gene25151 | 0.858639 | 7.17E-63 | -1.69E-46 |
MS.gene060932 | MS.gene25151 | 0.819419 | 1.17E-52 | -1.69E-46 |
MS.gene060998 | MS.gene25151 | 0.818863 | 1.57E-52 | -1.69E-46 |
MS.gene061040 | MS.gene25151 | -0.819867 | 9.27E-53 | -1.69E-46 |
MS.gene061091 | MS.gene25151 | 0.821381 | 4.16E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25151.t1 | MTR_8g020200 | 98.246 | 114 | 2 | 0 | 1 | 114 | 1 | 114 | 5.25e-76 | 220 |
MS.gene25151.t1 | MTR_2g041310 | 71.053 | 114 | 33 | 0 | 1 | 114 | 1 | 114 | 6.06e-55 | 167 |
MS.gene25151.t1 | MTR_4g125590 | 70.796 | 113 | 32 | 1 | 1 | 112 | 1 | 113 | 9.38e-54 | 164 |
MS.gene25151.t1 | MTR_3g070490 | 46.250 | 80 | 43 | 0 | 6 | 85 | 36 | 115 | 1.41e-21 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25151.t1 | AT1G17455 | 70.796 | 113 | 33 | 0 | 1 | 113 | 1 | 113 | 4.47e-53 | 162 |
MS.gene25151.t1 | AT1G17455 | 70.796 | 113 | 33 | 0 | 1 | 113 | 1 | 113 | 4.47e-53 | 162 |
MS.gene25151.t1 | AT1G72630 | 66.667 | 114 | 37 | 1 | 1 | 113 | 5 | 118 | 5.50e-49 | 152 |
MS.gene25151.t1 | AT2G06255 | 60.870 | 115 | 38 | 3 | 1 | 114 | 1 | 109 | 4.65e-42 | 134 |
MS.gene25151.t1 | AT2G29950 | 52.113 | 71 | 34 | 0 | 16 | 86 | 34 | 104 | 1.36e-18 | 75.5 |
MS.gene25151.t1 | AT2G40080 | 47.143 | 70 | 37 | 0 | 16 | 85 | 22 | 91 | 1.39e-18 | 75.1 |
Find 15 sgRNAs with CRISPR-Local
Find 17 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCCTAGACTCATGATTT+TGG | 0.224769 | 8.4:-73221518 | None:intergenic |
GGTGATATATTTGGAGAATT+AGG | 0.240535 | 8.4:+73221390 | MS.gene25151:CDS |
AACTTGATCTAATTCTCTTC+TGG | 0.282924 | 8.4:-73221704 | None:intergenic |
AAAATGGAAGGTGATATATT+TGG | 0.290272 | 8.4:+73221381 | None:intergenic |
ACATTTCTACTCAGATTATC+AGG | 0.344511 | 8.4:-73221540 | None:intergenic |
AGACGAAGCTTCCCGCGACT+TGG | 0.462270 | 8.4:-73221637 | None:intergenic |
AGTGGAACTCTCAAATCTGA+TGG | 0.488717 | 8.4:+73221672 | MS.gene25151:CDS |
TAAACCAAAATCATGAGTCT+AGG | 0.526715 | 8.4:+73221514 | MS.gene25151:CDS |
TTATCTGGTTGATTAAAAGC+CGG | 0.545205 | 8.4:-73221494 | None:intergenic |
TCGCGGGAAGCTTCGTCTGA+AGG | 0.551915 | 8.4:+73221642 | MS.gene25151:CDS |
GATAATCTGAGTAGAAATGT+TGG | 0.559396 | 8.4:+73221543 | MS.gene25151:CDS |
GAGTTCGTTTACCAAGTCGC+GGG | 0.624410 | 8.4:+73221626 | MS.gene25151:CDS |
CGAGTTCGTTTACCAAGTCG+CGG | 0.624955 | 8.4:+73221625 | MS.gene25151:CDS |
TCGTCTGAAGGAGATTCAAG+TGG | 0.640398 | 8.4:+73221654 | MS.gene25151:CDS |
GAATAGTAATATCAGAAGAG+TGG | 0.647250 | 8.4:+73221581 | MS.gene25151:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGATATTTTGAATCAAAAC+CGG | + | chr8.4:73221475-73221494 | MS.gene25151:CDS | 20.0% |
AACTTGATCTAATTCTCTTC+TGG | - | chr8.4:73221707-73221726 | None:intergenic | 30.0% | |
ACATTTCTACTCAGATTATC+AGG | - | chr8.4:73221543-73221562 | None:intergenic | 30.0% | |
GAATAGTAATATCAGAAGAG+TGG | + | chr8.4:73221581-73221600 | MS.gene25151:CDS | 30.0% | |
GATAATCTGAGTAGAAATGT+TGG | + | chr8.4:73221543-73221562 | MS.gene25151:CDS | 30.0% | |
GGTGATATATTTGGAGAATT+AGG | + | chr8.4:73221390-73221409 | MS.gene25151:CDS | 30.0% | |
TAAACCAAAATCATGAGTCT+AGG | + | chr8.4:73221514-73221533 | MS.gene25151:CDS | 30.0% | |
TTATCTGGTTGATTAAAAGC+CGG | - | chr8.4:73221497-73221516 | None:intergenic | 30.0% | |
! | AGTAGATAGTAGAGTTTTAC+AGG | + | chr8.4:73221425-73221444 | MS.gene25151:CDS | 30.0% |
!!! | ACTCATGATTTTGGTTTATC+TGG | - | chr8.4:73221512-73221531 | None:intergenic | 30.0% |
! | GAATCCTAGACTCATGATTT+TGG | - | chr8.4:73221521-73221540 | None:intergenic | 35.0% |
AGTGGAACTCTCAAATCTGA+TGG | + | chr8.4:73221672-73221691 | MS.gene25151:CDS | 40.0% | |
TCGTCTGAAGGAGATTCAAG+TGG | + | chr8.4:73221654-73221673 | MS.gene25151:CDS | 45.0% | |
CGAGTTCGTTTACCAAGTCG+CGG | + | chr8.4:73221625-73221644 | MS.gene25151:CDS | 50.0% | |
GAGTTCGTTTACCAAGTCGC+GGG | + | chr8.4:73221626-73221645 | MS.gene25151:CDS | 50.0% | |
AGACGAAGCTTCCCGCGACT+TGG | - | chr8.4:73221640-73221659 | None:intergenic | 60.0% | |
TCGCGGGAAGCTTCGTCTGA+AGG | + | chr8.4:73221642-73221661 | MS.gene25151:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 73221384 | 73221728 | 73221384 | ID=MS.gene25151 |
chr8.4 | mRNA | 73221384 | 73221728 | 73221384 | ID=MS.gene25151.t1;Parent=MS.gene25151 |
chr8.4 | exon | 73221384 | 73221728 | 73221384 | ID=MS.gene25151.t1.exon1;Parent=MS.gene25151.t1 |
chr8.4 | CDS | 73221384 | 73221728 | 73221384 | ID=cds.MS.gene25151.t1;Parent=MS.gene25151.t1 |
Gene Sequence |
Protein sequence |