Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46312.t1 | XP_013449828.1 | 95.4 | 503 | 23 | 0 | 1 | 503 | 1 | 503 | 9.30E-293 | 1015.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46312.t1 | Q3EBR6 | 55.7 | 447 | 187 | 7 | 58 | 497 | 83 | 525 | 1.8e-148 | 527.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46312.t1 | A0A072U3F4 | 95.4 | 503 | 23 | 0 | 1 | 503 | 1 | 503 | 6.7e-293 | 1015.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene46312 | 0.810032 | 1.41E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene46312 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene46312 | 0.819034 | 1.44E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene46312 | 0.810724 | 1.00E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene46312 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene46312 | 0.841757 | 3.92E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene46312 | 0.866104 | 3.64E-65 | -1.69E-46 |
| MS.gene050426 | MS.gene46312 | -0.840852 | 6.77E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene46312 | 0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene46312 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene46312 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene46312 | 0.808271 | 3.36E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene46312 | 0.850926 | 1.24E-60 | -1.69E-46 |
| MS.gene051255 | MS.gene46312 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene46312 | 0.807995 | 3.85E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene46312 | 0.843505 | 1.34E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene46312 | 0.816429 | 5.56E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene46312 | -0.844977 | 5.41E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene46312 | 0.830011 | 3.73E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene46312 | 0.817062 | 4.01E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene46312 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene46312 | 0.823322 | 1.47E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene46312 | 0.847688 | 9.87E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene46312 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene05233 | MS.gene46312 | -0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene46312 | 0.862806 | 3.90E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene46312 | 0.83105 | 2.08E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene46312 | 0.824263 | 8.87E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene46312 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene46312 | 0.817724 | 2.84E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene46312 | 0.852303 | 5.04E-61 | -1.69E-46 |
| MS.gene054173 | MS.gene46312 | 0.810722 | 1.00E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene46312 | 0.835686 | 1.45E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene46312 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene46312 | 0.81023 | 1.28E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene46312 | 0.831181 | 1.93E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene46312 | 0.84942 | 3.27E-60 | -1.69E-46 |
| MS.gene055422 | MS.gene46312 | 0.831315 | 1.79E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene46312 | 0.827207 | 1.78E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene46312 | 0.820497 | 6.65E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene46312 | 0.805302 | 1.43E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene46312 | 0.847273 | 1.28E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene46312 | 0.825489 | 4.56E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene46312 | 0.807934 | 3.97E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene46312 | 0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene46312 | 0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene46312 | -0.827889 | 1.22E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene46312 | 0.809178 | 2.15E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene46312 | 0.834127 | 3.59E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene46312 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene46312 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene46312 | 0.819232 | 1.29E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene46312 | 0.837354 | 5.46E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene46312 | 0.83432 | 3.21E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene46312 | 0.837893 | 3.97E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene46312 | 0.844711 | 6.38E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene46312 | 0.800427 | 1.45E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene46312 | 0.836605 | 8.48E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene46312 | 0.844582 | 6.91E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene46312 | 0.850121 | 2.08E-60 | -1.69E-46 |
| MS.gene059285 | MS.gene46312 | 0.819431 | 1.17E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene46312 | 0.843379 | 1.45E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene46312 | 0.803312 | 3.70E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene46312 | 0.858821 | 6.33E-63 | -1.69E-46 |
| MS.gene059518 | MS.gene46312 | 0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene46312 | 0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene46312 | 0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene46312 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene46312 | 0.861888 | 7.48E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene46312 | 0.843015 | 1.82E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene46312 | 0.829758 | 4.30E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene46312 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene46312 | 0.854046 | 1.60E-61 | -1.69E-46 |
| MS.gene061049 | MS.gene46312 | 0.86253 | 4.75E-64 | -1.69E-46 |
| MS.gene061051 | MS.gene46312 | -0.815746 | 7.89E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene46312 | 0.829114 | 6.17E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene46312 | 0.812935 | 3.30E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031785 | MS.gene46312 | PPI |
| MS.gene46312 | MS.gene052346 | PPI |
| MS.gene28990 | MS.gene46312 | PPI |
| MS.gene46312 | MS.gene006510 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46312.t1 | MTR_7g096120 | 95.427 | 503 | 23 | 0 | 1 | 503 | 1 | 503 | 0.0 | 992 |
| MS.gene46312.t1 | MTR_7g096140 | 94.978 | 458 | 23 | 0 | 1 | 458 | 1 | 458 | 0.0 | 883 |
| MS.gene46312.t1 | MTR_4g077070 | 54.206 | 428 | 182 | 9 | 73 | 495 | 99 | 517 | 2.75e-167 | 483 |
| MS.gene46312.t1 | MTR_1995s0010 | 95.964 | 223 | 9 | 0 | 197 | 419 | 1 | 223 | 3.76e-159 | 451 |
| MS.gene46312.t1 | MTR_2g015690 | 40.686 | 408 | 214 | 5 | 74 | 474 | 20 | 406 | 3.50e-100 | 308 |
| MS.gene46312.t1 | MTR_4g087810 | 39.430 | 421 | 218 | 8 | 74 | 488 | 13 | 402 | 4.87e-96 | 296 |
| MS.gene46312.t1 | MTR_4g087830 | 38.480 | 421 | 222 | 8 | 74 | 488 | 4 | 393 | 1.50e-94 | 293 |
| MS.gene46312.t1 | MTR_7g006400 | 41.761 | 352 | 173 | 10 | 74 | 418 | 105 | 431 | 4.15e-84 | 269 |
| MS.gene46312.t1 | MTR_5g013230 | 39.578 | 379 | 196 | 11 | 74 | 437 | 135 | 495 | 3.51e-81 | 263 |
| MS.gene46312.t1 | MTR_4g080100 | 33.556 | 450 | 244 | 7 | 52 | 475 | 10 | 430 | 4.36e-81 | 259 |
| MS.gene46312.t1 | MTR_7g081645 | 38.235 | 374 | 189 | 12 | 74 | 434 | 75 | 419 | 3.05e-77 | 248 |
| MS.gene46312.t1 | MTR_7g081620 | 34.549 | 466 | 242 | 15 | 10 | 438 | 11 | 450 | 2.69e-75 | 244 |
| MS.gene46312.t1 | MTR_4g099510 | 39.024 | 369 | 195 | 9 | 78 | 437 | 133 | 480 | 2.69e-71 | 236 |
| MS.gene46312.t1 | MTR_2g020020 | 34.940 | 166 | 80 | 7 | 198 | 359 | 98 | 239 | 1.54e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46312.t1 | AT2G30550 | 55.705 | 447 | 187 | 7 | 58 | 497 | 83 | 525 | 0.0 | 525 |
| MS.gene46312.t1 | AT1G06800 | 57.243 | 428 | 173 | 7 | 74 | 495 | 85 | 508 | 0.0 | 519 |
| MS.gene46312.t1 | AT1G51440 | 53.182 | 440 | 179 | 10 | 72 | 495 | 85 | 513 | 7.61e-157 | 457 |
| MS.gene46312.t1 | AT2G30550 | 57.682 | 371 | 146 | 7 | 58 | 421 | 83 | 449 | 2.87e-156 | 453 |
| MS.gene46312.t1 | AT1G06800 | 59.207 | 353 | 134 | 7 | 74 | 420 | 85 | 433 | 7.53e-154 | 446 |
| MS.gene46312.t1 | AT1G30370 | 42.469 | 405 | 216 | 7 | 74 | 473 | 114 | 506 | 1.13e-108 | 333 |
| MS.gene46312.t1 | AT1G05800 | 43.059 | 353 | 176 | 8 | 72 | 419 | 78 | 410 | 2.23e-92 | 289 |
| MS.gene46312.t1 | AT1G06250 | 37.805 | 410 | 224 | 6 | 74 | 474 | 5 | 392 | 9.39e-88 | 276 |
| MS.gene46312.t1 | AT2G31690 | 41.417 | 367 | 193 | 9 | 66 | 427 | 80 | 429 | 1.34e-87 | 277 |
| MS.gene46312.t1 | AT4G18550 | 36.029 | 408 | 232 | 4 | 76 | 475 | 21 | 407 | 2.06e-87 | 275 |
| MS.gene46312.t1 | AT4G18550 | 36.029 | 408 | 232 | 4 | 76 | 475 | 38 | 424 | 3.59e-87 | 275 |
| MS.gene46312.t1 | AT2G42690 | 35.308 | 422 | 224 | 6 | 77 | 475 | 7 | 402 | 6.73e-83 | 263 |
| MS.gene46312.t1 | AT4G16820 | 39.512 | 410 | 207 | 13 | 41 | 436 | 96 | 478 | 5.99e-78 | 253 |
| MS.gene46312.t1 | AT2G44810 | 35.938 | 384 | 207 | 10 | 70 | 434 | 80 | 443 | 3.95e-77 | 249 |
| MS.gene46312.t1 | AT2G44810 | 37.027 | 370 | 196 | 9 | 82 | 434 | 4 | 353 | 8.81e-77 | 245 |
| MS.gene46312.t1 | AT4G18550 | 37.818 | 275 | 165 | 2 | 76 | 344 | 38 | 312 | 1.74e-63 | 209 |
| MS.gene46312.t1 | AT1G06250 | 36.455 | 299 | 164 | 3 | 181 | 474 | 1 | 278 | 9.70e-60 | 199 |
Find 118 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGATTGGAGAAACATTT+AGG | 0.169595 | 7.3:-15216460 | MS.gene46312:CDS |
| ATTAGTTCGGATCGCATTAT+TGG | 0.222517 | 7.3:+15217419 | None:intergenic |
| TATCTTGGTAAAGAGGTTTA+AGG | 0.239651 | 7.3:+15216797 | None:intergenic |
| TTCAAATCTTGCCTCCAATT+TGG | 0.241101 | 7.3:+15214729 | None:intergenic |
| CGAGATTTCTTAAAGAAATC+TGG | 0.241938 | 7.3:+15217224 | None:intergenic |
| GGACATTGCTTTGGTGAATA+AGG | 0.258869 | 7.3:-15214787 | MS.gene46312:CDS |
| AAGAAAGTGGATTCGGATTT+GGG | 0.266472 | 7.3:+15217668 | None:intergenic |
| GAAGAAAGTGGATTCGGATT+TGG | 0.267139 | 7.3:+15217667 | None:intergenic |
| GTTGGGAACATGAAATTTAA+AGG | 0.267233 | 7.3:-15216481 | MS.gene46312:CDS |
| GGGTTAAATGTTAGGGAAAA+TGG | 0.274934 | 7.3:-15216547 | MS.gene46312:CDS |
| TTGTGTAATGGTGTTGATTT+GGG | 0.277245 | 7.3:+15217556 | None:intergenic |
| CAGAAACAGGGTTAAATGTT+AGG | 0.283257 | 7.3:-15216555 | MS.gene46312:CDS |
| GATATGAAGCAACCACTAAT+AGG | 0.305971 | 7.3:-15214809 | MS.gene46312:CDS |
| CTCGATGGCCAGATAAATAT+TGG | 0.316448 | 7.3:-15217205 | MS.gene46312:CDS |
| CATGAAATTTAAAGGGAGAT+TGG | 0.327254 | 7.3:-15216473 | MS.gene46312:CDS |
| GGAGATTGGAGAAACATTTA+GGG | 0.327887 | 7.3:-15216459 | MS.gene46312:CDS |
| GTTGTGTAATGGTGTTGATT+TGG | 0.336507 | 7.3:+15217555 | None:intergenic |
| GGGTTTGTGGGTTTGTTGTT+TGG | 0.343105 | 7.3:+15217615 | None:intergenic |
| TCCGAATCCACTTTCTTCTT+CGG | 0.346871 | 7.3:-15217662 | MS.gene46312:CDS |
| ATTGGAGCGAACACGCGAAT+TGG | 0.349997 | 7.3:-15217187 | MS.gene46312:CDS |
| GCAAGATTTGAATAGGAATA+TGG | 0.354087 | 7.3:-15214718 | MS.gene46312:CDS |
| GCGTTTGATATAGCAGAAAC+AGG | 0.357748 | 7.3:-15216568 | MS.gene46312:CDS |
| AGCACTCTGTGCCACCAAAT+TGG | 0.358258 | 7.3:-15214743 | MS.gene46312:CDS |
| GAAGTTAGTATTACGTTAAC+GGG | 0.360874 | 7.3:-15216625 | MS.gene46312:CDS |
| TTAGTTCGGATCGCATTATT+GGG | 0.370755 | 7.3:+15217420 | None:intergenic |
| ATTGGAGGCAAGATTTGAAT+AGG | 0.374370 | 7.3:-15214725 | MS.gene46312:CDS |
| ACGTTAACGGGACATAGTTT+AGG | 0.375765 | 7.3:-15216613 | MS.gene46312:CDS |
| TGTTCGCTCCAATATTTATC+TGG | 0.378386 | 7.3:+15217197 | None:intergenic |
| AAAATCAAATGCATCATAAC+AGG | 0.381110 | 7.3:+15217373 | None:intergenic |
| AAATCCACGGTGAAGATGAT+TGG | 0.395504 | 7.3:-15217466 | MS.gene46312:CDS |
| GCACATGCAGCATCAGCATT+AGG | 0.397000 | 7.3:+15216256 | None:intergenic |
| ATAAGAAACCCTGGTGACTT+TGG | 0.419814 | 7.3:+15216397 | None:intergenic |
| TTACCAAGATATTCCTTGTC+CGG | 0.425973 | 7.3:-15216785 | MS.gene46312:CDS |
| TTGGGAACATGAAATTTAAA+GGG | 0.429025 | 7.3:-15216480 | MS.gene46312:CDS |
| CACTAATAGGGACATTGCTT+TGG | 0.430429 | 7.3:-15214796 | MS.gene46312:CDS |
| CAAAGCAATGTCCCTATTAG+TGG | 0.431741 | 7.3:+15214797 | None:intergenic |
| TCCGAAGAAGAAAGTGGATT+CGG | 0.434609 | 7.3:+15217661 | None:intergenic |
| GGTTTGTTGTTTGGAATTTG+AGG | 0.434688 | 7.3:+15217624 | None:intergenic |
| GGTTCATAATAAGCATGATA+TGG | 0.439973 | 7.3:-15216422 | MS.gene46312:CDS |
| TGCTGCATGTGCTCATAACT+TGG | 0.440073 | 7.3:-15216245 | MS.gene46312:CDS |
| AGAAACAGGGTTAAATGTTA+GGG | 0.448099 | 7.3:-15216554 | MS.gene46312:CDS |
| TAACATTTGCTGTGGCATAT+AGG | 0.457324 | 7.3:+15217252 | None:intergenic |
| AGAAGTTAGTATTACGTTAA+CGG | 0.458390 | 7.3:-15216626 | MS.gene46312:CDS |
| TTGTGATTGGAGTTGTGTAA+TGG | 0.458559 | 7.3:+15217544 | None:intergenic |
| CAAGGAATATCTTGGTAAAG+AGG | 0.459874 | 7.3:+15216790 | None:intergenic |
| AAATGCATCATAACAGGCTT+GGG | 0.461251 | 7.3:+15217379 | None:intergenic |
| CAAATGCATCATAACAGGCT+TGG | 0.470701 | 7.3:+15217378 | None:intergenic |
| CCCTAAAACTTGTTCTCTTG+CGG | 0.472497 | 7.3:+15216684 | None:intergenic |
| GATCGCATTATTGGGTCCAT+TGG | 0.473058 | 7.3:+15217428 | None:intergenic |
| CATATCCACGGTTGCTCCCA+TGG | 0.475119 | 7.3:+15214826 | None:intergenic |
| GCAGAGACATTGTTATTGCT+TGG | 0.475619 | 7.3:-15216867 | MS.gene46312:CDS |
| GTAATACTAACTTCTTCATC+AGG | 0.475955 | 7.3:+15216634 | None:intergenic |
| TCTACTCGAACGTCGTTGTC+CGG | 0.476225 | 7.3:+15216766 | None:intergenic |
| CGAAGATGGACGTTGGGTGC+TGG | 0.476306 | 7.3:-15214688 | MS.gene46312:CDS |
| AATCCACGGTGAAGATGATT+GGG | 0.485607 | 7.3:-15217465 | MS.gene46312:CDS |
| TGTTGCTTCATCGTTTGAAA+CGG | 0.487757 | 7.3:+15217151 | None:intergenic |
| GAGCCTTATCTCTCTCAGAT+AGG | 0.488241 | 7.3:-15214624 | MS.gene46312:CDS |
| CAGCACCCAACGTCCATCTT+CGG | 0.497295 | 7.3:+15214689 | None:intergenic |
| AAATCTTGCCTCCAATTTGG+TGG | 0.500957 | 7.3:+15214732 | None:intergenic |
| TTCTCCGTAACGGATTAGTT+CGG | 0.501522 | 7.3:+15217406 | None:intergenic |
| CGTTAGATCTTCCACACATA+GGG | 0.505096 | 7.3:-15217292 | MS.gene46312:CDS |
| GAGATTTCTTAAAGAAATCT+GGG | 0.505416 | 7.3:+15217225 | None:intergenic |
| AACCGTTACTCATGTCGAAT+GGG | 0.510098 | 7.3:-15216839 | MS.gene46312:CDS |
| GAGCGAACACGCGAATTGGA+TGG | 0.515578 | 7.3:-15217183 | MS.gene46312:CDS |
| TGTTTGGAATTTGAGGTGGT+TGG | 0.521451 | 7.3:+15217631 | None:intergenic |
| GATATGGTGCCAAAGTCACC+AGG | 0.523665 | 7.3:-15216406 | MS.gene46312:CDS |
| TGTCCGGACAAGGAATATCT+TGG | 0.524914 | 7.3:+15216782 | None:intergenic |
| TGTTGGAGTTGAGTTAGAGT+TGG | 0.525724 | 7.3:-15216305 | MS.gene46312:CDS |
| AGCGAACACGCGAATTGGAT+GGG | 0.532329 | 7.3:-15217182 | MS.gene46312:CDS |
| AATATGGTGAAGACCGAAGA+TGG | 0.533831 | 7.3:-15214702 | MS.gene46312:CDS |
| TAGTGGTTGCTTCATATCCA+CGG | 0.536813 | 7.3:+15214814 | None:intergenic |
| ATATGAAGCAACCACTAATA+GGG | 0.537930 | 7.3:-15214808 | MS.gene46312:CDS |
| GATGAGTATCTGCAAGTTGT+GGG | 0.543513 | 7.3:+15214658 | None:intergenic |
| CCATGGTGTTATACTCATGT+TGG | 0.543800 | 7.3:-15216322 | MS.gene46312:CDS |
| GGTTGGACTTCTAGATCCAA+TGG | 0.547144 | 7.3:-15217444 | MS.gene46312:CDS |
| CTGAGGATATTGATATTCCA+TGG | 0.547347 | 7.3:-15216339 | MS.gene46312:CDS |
| AATTTCATGTTCCCAACCCT+AGG | 0.550462 | 7.3:+15216487 | None:intergenic |
| CGAACGTCGTTGTCCGGACA+AGG | 0.552198 | 7.3:+15216772 | None:intergenic |
| AGTGGATTCGGATTTGGGAA+AGG | 0.556138 | 7.3:+15217673 | None:intergenic |
| TGCATGTGCTCATAACTTGG+AGG | 0.557550 | 7.3:-15216242 | MS.gene46312:CDS |
| TCGTTAGATCTTCCACACAT+AGG | 0.560088 | 7.3:-15217293 | MS.gene46312:CDS |
| TGATGATGAGCAGGTACCAT+GGG | 0.560215 | 7.3:-15214842 | MS.gene46312:intron |
| ACTCTGTGCCACCAAATTGG+AGG | 0.560687 | 7.3:-15214740 | MS.gene46312:CDS |
| GAACCGTTACTCATGTCGAA+TGG | 0.561270 | 7.3:-15216840 | MS.gene46312:CDS |
| AATGGTGTTGATTTGGGATG+CGG | 0.561445 | 7.3:+15217562 | None:intergenic |
| ATTGAATCCGAAGAAGAAAG+TGG | 0.561829 | 7.3:+15217655 | None:intergenic |
| GATCCATATTCAAAATATTG+TGG | 0.563766 | 7.3:-15217350 | MS.gene46312:CDS |
| AGTCCTATCTGAGAGAGATA+AGG | 0.565544 | 7.3:+15214621 | None:intergenic |
| ACCCATCGAGTATGTGCAAG+TGG | 0.565551 | 7.3:+15216218 | None:intergenic |
| GCCCACTTGCACATACTCGA+TGG | 0.566632 | 7.3:-15216220 | MS.gene46312:CDS |
| CACGGTGAAGATGATTGGGT+TGG | 0.567726 | 7.3:-15217461 | MS.gene46312:CDS |
| CGATCCGAACTAATCCGTTA+CGG | 0.571824 | 7.3:-15217410 | MS.gene46312:CDS |
| GACATTGTTATTGCTTGGCG+AGG | 0.572632 | 7.3:-15216862 | MS.gene46312:CDS |
| GAAGACCGAAGATGGACGTT+GGG | 0.573919 | 7.3:-15214694 | MS.gene46312:CDS |
| TTCTCATTAATAAGAAACCC+TGG | 0.577571 | 7.3:+15216388 | None:intergenic |
| TTGTTGTTTGGAATTTGAGG+TGG | 0.580769 | 7.3:+15217627 | None:intergenic |
| AACGACGTTCGAGTAGAAGC+AGG | 0.582473 | 7.3:-15216760 | MS.gene46312:CDS |
| TGATGAGTATCTGCAAGTTG+TGG | 0.587655 | 7.3:+15214657 | None:intergenic |
| ACATAGTTTAGGAAGTGCTA+TGG | 0.599721 | 7.3:-15216602 | MS.gene46312:CDS |
| GTGGTTATTAAAGTTTGCTG+AGG | 0.600416 | 7.3:-15216356 | MS.gene46312:CDS |
| CGTTTGATATAGCAGAAACA+GGG | 0.608919 | 7.3:-15216567 | MS.gene46312:CDS |
| TGTGTGGAAGATCTAACGAT+GGG | 0.619407 | 7.3:+15217297 | None:intergenic |
| CCCACTTGCACATACTCGAT+GGG | 0.620876 | 7.3:-15216219 | MS.gene46312:intron |
| TTGATGATGAGCAGGTACCA+TGG | 0.623853 | 7.3:-15214843 | MS.gene46312:intron |
| TACCCATTCGACATGAGTAA+CGG | 0.630242 | 7.3:+15216837 | None:intergenic |
| TGGGACGTTAACATTTGCTG+TGG | 0.639988 | 7.3:+15217244 | None:intergenic |
| AGGTACCATGGGAGCAACCG+TGG | 0.651704 | 7.3:-15214831 | MS.gene46312:CDS |
| GTTACGTCATACCCTATGTG+TGG | 0.653846 | 7.3:+15217281 | None:intergenic |
| GAGATTGGAGAAACATTTAG+GGG | 0.658549 | 7.3:-15216458 | MS.gene46312:CDS |
| ATTTCTTTAAGAAATCTCGA+TGG | 0.659322 | 7.3:-15217220 | MS.gene46312:CDS |
| CCCATCGAGTATGTGCAAGT+GGG | 0.660658 | 7.3:+15216219 | None:intergenic |
| TTAATGAGAAATCGCCTGAG+TGG | 0.664008 | 7.3:-15216375 | MS.gene46312:CDS |
| GCAAACTTTAATAACCACTC+AGG | 0.666053 | 7.3:+15216361 | None:intergenic |
| ATGTGTGGAAGATCTAACGA+TGG | 0.689828 | 7.3:+15217296 | None:intergenic |
| CCAACATGAGTATAACACCA+TGG | 0.694193 | 7.3:+15216322 | None:intergenic |
| TGAAGACCGAAGATGGACGT+TGG | 0.699979 | 7.3:-15214695 | MS.gene46312:CDS |
| CAACCCAATCATCTTCACCG+TGG | 0.749438 | 7.3:+15217462 | None:intergenic |
| ATATGGTGCCAAAGTCACCA+GGG | 0.760395 | 7.3:-15216405 | MS.gene46312:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAATTTAAATATG+GGG | - | chr7.3:15216427-15216446 | MS.gene46312:CDS | 10.0% |
| !! | ATATAGTGTAAAAAAAAAAA+GGG | - | chr7.3:15216723-15216742 | MS.gene46312:CDS | 10.0% |
| !! | CAAACTAAAAAATTTAAATA+TGG | - | chr7.3:15216425-15216444 | MS.gene46312:CDS | 10.0% |
| !! | TATATAGTGTAAAAAAAAAA+AGG | - | chr7.3:15216722-15216741 | MS.gene46312:CDS | 10.0% |
| !!! | AAGAATAATGTTTATAATTT+TGG | - | chr7.3:15217319-15217338 | MS.gene46312:CDS | 10.0% |
| !! | ACTAAAAAATTTAAATATGG+GGG | - | chr7.3:15216428-15216447 | MS.gene46312:CDS | 15.0% |
| !! | TGATTCCAAATATAAAAATA+TGG | + | chr7.3:15216284-15216303 | None:intergenic | 15.0% |
| !! | TTCAAACATAAATAACATTA+GGG | + | chr7.3:15215405-15215424 | None:intergenic | 15.0% |
| !! | TTTCAAACATAAATAACATT+AGG | + | chr7.3:15215406-15215425 | None:intergenic | 15.0% |
| !!! | GATATATTTAGTTCAAATTT+TGG | + | chr7.3:15215296-15215315 | None:intergenic | 15.0% |
| !!! | TGAGTATTTGATTTTTTAAT+AGG | - | chr7.3:15216826-15216845 | MS.gene46312:CDS | 15.0% |
| !!! | TTATGTTAACTATTTTTGAA+TGG | - | chr7.3:15217395-15217414 | MS.gene46312:CDS | 15.0% |
| !!! | TTTAGAATGATACATTTTTT+TGG | + | chr7.3:15217132-15217151 | None:intergenic | 15.0% |
| !!! | TTTTTAAGCAAAAAGATTAT+GGG | - | chr7.3:15216503-15216522 | MS.gene46312:CDS | 15.0% |
| !!! | TTTTTTAAGCAAAAAGATTA+TGG | - | chr7.3:15216502-15216521 | MS.gene46312:CDS | 15.0% |
| !! | AAAATGAAAAAACAGAAACA+TGG | + | chr7.3:15215791-15215810 | None:intergenic | 20.0% |
| !! | AATAACGAAAAACATTTGTT+CGG | + | chr7.3:15216606-15216625 | None:intergenic | 20.0% |
| !! | AATGGCAAAATTTGTATATA+TGG | - | chr7.3:15217413-15217432 | MS.gene46312:CDS | 20.0% |
| !! | ACAAATGCATAATATATGAA+GGG | - | chr7.3:15217031-15217050 | MS.gene46312:intron | 20.0% |
| !! | ATATATTTAATACATGCATG+AGG | + | chr7.3:15215234-15215253 | None:intergenic | 20.0% |
| !! | ATGGCAAAATTTGTATATAT+GGG | - | chr7.3:15217414-15217433 | MS.gene46312:CDS | 20.0% |
| !! | TATATTTAATACATGCATGA+GGG | + | chr7.3:15215233-15215252 | None:intergenic | 20.0% |
| !!! | ACATAGCTAGTAATTTTATT+TGG | + | chr7.3:15216912-15216931 | None:intergenic | 20.0% |
| !!! | ATATTTTGCAAATGAACTTT+TGG | - | chr7.3:15215361-15215380 | MS.gene46312:intron | 20.0% |
| !!! | CAAATGTTTTTCGTTATTTA+TGG | - | chr7.3:15216608-15216627 | MS.gene46312:CDS | 20.0% |
| !!! | CACTACCATATTTTTATATT+TGG | - | chr7.3:15216276-15216295 | MS.gene46312:CDS | 20.0% |
| !!! | TATTTATGTTTGAAACTAAC+AGG | - | chr7.3:15215411-15215430 | MS.gene46312:intron | 20.0% |
| !!! | TTATGAGTATATTTTGAGAT+CGG | - | chr7.3:15215333-15215352 | MS.gene46312:intron | 20.0% |
| !!! | TTTAAGGTAATTTTGAAGAT+TGG | + | chr7.3:15215493-15215512 | None:intergenic | 20.0% |
| !!! | TTTTAAGCAAAAAGATTATG+GGG | - | chr7.3:15216504-15216523 | MS.gene46312:CDS | 20.0% |
| !!! | TTTTTTACACTATATATGTC+TGG | + | chr7.3:15216718-15216737 | None:intergenic | 20.0% |
| ! | AAAATCAAATGCATCATAAC+AGG | + | chr7.3:15214933-15214952 | None:intergenic | 25.0% |
| ! | AGAAGTTAGTATTACGTTAA+CGG | - | chr7.3:15215677-15215696 | MS.gene46312:intron | 25.0% |
| ! | CAAATGCATAATATATGAAG+GGG | - | chr7.3:15217032-15217051 | MS.gene46312:intron | 25.0% |
| ! | GACAAATGCATAATATATGA+AGG | - | chr7.3:15217030-15217049 | MS.gene46312:intron | 25.0% |
| ! | GAGATTTCTTAAAGAAATCT+GGG | + | chr7.3:15215081-15215100 | None:intergenic | 25.0% |
| ! | GATCCATATTCAAAATATTG+TGG | - | chr7.3:15214953-15214972 | MS.gene46312:intron | 25.0% |
| ! | TTGGGAACATGAAATTTAAA+GGG | - | chr7.3:15215823-15215842 | MS.gene46312:intron | 25.0% |
| !! | ACATTTTAAATATGGAGAAG+TGG | + | chr7.3:15217082-15217101 | None:intergenic | 25.0% |
| !! | ATTTCTTTAAGAAATCTCGA+TGG | - | chr7.3:15215083-15215102 | MS.gene46312:intron | 25.0% |
| !! | TCAAAAATGGAGAAATTTTG+TGG | + | chr7.3:15216025-15216044 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGTGTTTTGTGAT+TGG | + | chr7.3:15214775-15214794 | None:intergenic | 25.0% |
| !!! | ATTTGTTGCTTTTGATTCAT+AGG | + | chr7.3:15217375-15217394 | None:intergenic | 25.0% |
| !!! | CTACCACAATATTTTGAATA+TGG | + | chr7.3:15214959-15214978 | None:intergenic | 25.0% |
| !!! | GATTATTTGTGATTTGTTGA+TGG | - | chr7.3:15217236-15217255 | MS.gene46312:CDS | 25.0% |
| !!! | GATTTGATTTTCAATTCTAC+TGG | + | chr7.3:15216654-15216673 | None:intergenic | 25.0% |
| !!! | GTTTCTGTTTTTTCATTTTC+TGG | - | chr7.3:15215792-15215811 | MS.gene46312:intron | 25.0% |
| AGAAACAGGGTTAAATGTTA+GGG | - | chr7.3:15215749-15215768 | MS.gene46312:intron | 30.0% | |
| ATATGAAGCAACCACTAATA+GGG | - | chr7.3:15217495-15217514 | MS.gene46312:CDS | 30.0% | |
| CATGAAATTTAAAGGGAGAT+TGG | - | chr7.3:15215830-15215849 | MS.gene46312:intron | 30.0% | |
| CGAGATTTCTTAAAGAAATC+TGG | + | chr7.3:15215082-15215101 | None:intergenic | 30.0% | |
| CTTCGATTGAATTGATTGAT+AGG | - | chr7.3:15216170-15216189 | MS.gene46312:intron | 30.0% | |
| GAAGTTAGTATTACGTTAAC+GGG | - | chr7.3:15215678-15215697 | MS.gene46312:intron | 30.0% | |
| GATGAAGCAACACAAAAAAT+CGG | - | chr7.3:15215163-15215182 | MS.gene46312:intron | 30.0% | |
| GCAAGATTTGAATAGGAATA+TGG | - | chr7.3:15217585-15217604 | MS.gene46312:CDS | 30.0% | |
| GGTTCATAATAAGCATGATA+TGG | - | chr7.3:15215881-15215900 | MS.gene46312:intron | 30.0% | |
| GTAATACTAACTTCTTCATC+AGG | + | chr7.3:15215672-15215691 | None:intergenic | 30.0% | |
| GTTGGGAACATGAAATTTAA+AGG | - | chr7.3:15215822-15215841 | MS.gene46312:intron | 30.0% | |
| TATCTTGGTAAAGAGGTTTA+AGG | + | chr7.3:15215509-15215528 | None:intergenic | 30.0% | |
| TCAGCATTAGGATTCAAAAA+TGG | + | chr7.3:15216038-15216057 | None:intergenic | 30.0% | |
| TTCTCATTAATAAGAAACCC+TGG | + | chr7.3:15215918-15215937 | None:intergenic | 30.0% | |
| ! | ATTTAGGGGTTAAGATTTTG+AGG | - | chr7.3:15215859-15215878 | MS.gene46312:intron | 30.0% |
| ! | GAGCTCACACATTTTAAATA+TGG | + | chr7.3:15217090-15217109 | None:intergenic | 30.0% |
| ! | TTTAGGGGTTAAGATTTTGA+GGG | - | chr7.3:15215860-15215879 | MS.gene46312:intron | 30.0% |
| ! | TTTTTCATTTTCTGGACCTA+GGG | - | chr7.3:15215800-15215819 | MS.gene46312:intron | 30.0% |
| !! | TTGTGTAATGGTGTTGATTT+GGG | + | chr7.3:15214750-15214769 | None:intergenic | 30.0% |
| !!! | CATTTGTTCGGTTTTGAAAT+AGG | + | chr7.3:15216594-15216613 | None:intergenic | 30.0% |
| !!! | GGTGAGTTTTTTTGTTGTTA+GGG | + | chr7.3:15214711-15214730 | None:intergenic | 30.0% |
| !!! | TGGTGAGTTTTTTTGTTGTT+AGG | + | chr7.3:15214712-15214731 | None:intergenic | 30.0% |
| !!! | TTTTGAAATAGGATTCTTGC+CGG | + | chr7.3:15216583-15216602 | None:intergenic | 30.0% |
| !!! | TTTTTGTTGTTAGGGTTTGT+GGG | + | chr7.3:15214703-15214722 | None:intergenic | 30.0% |
| !!! | TTTTTTCATTTTCTGGACCT+AGG | - | chr7.3:15215799-15215818 | MS.gene46312:intron | 30.0% |
| !!! | TTTTTTGTTGTTAGGGTTTG+TGG | + | chr7.3:15214704-15214723 | None:intergenic | 30.0% |
| AAATGCATCATAACAGGCTT+GGG | + | chr7.3:15214927-15214946 | None:intergenic | 35.0% | |
| AACTTCCCATAGAAAAAGCA+TGG | - | chr7.3:15214810-15214829 | MS.gene46312:CDS | 35.0% | |
| ACCGATAGACTCAAAAAAGA+CGG | - | chr7.3:15215582-15215601 | MS.gene46312:intron | 35.0% | |
| ATGGGAAAAATTCAAGGTGT+GGG | + | chr7.3:15214991-15215010 | None:intergenic | 35.0% | |
| ATTAGTTCGGATCGCATTAT+TGG | + | chr7.3:15214887-15214906 | None:intergenic | 35.0% | |
| ATTGAATCCGAAGAAGAAAG+TGG | + | chr7.3:15214651-15214670 | None:intergenic | 35.0% | |
| ATTGGAGGCAAGATTTGAAT+AGG | - | chr7.3:15217578-15217597 | MS.gene46312:CDS | 35.0% | |
| CAAGGAATATCTTGGTAAAG+AGG | + | chr7.3:15215516-15215535 | None:intergenic | 35.0% | |
| CAGAAACAGGGTTAAATGTT+AGG | - | chr7.3:15215748-15215767 | MS.gene46312:intron | 35.0% | |
| CGATCTTTCAACAACTCATT+GGG | + | chr7.3:15216355-15216374 | None:intergenic | 35.0% | |
| CGTTTGATATAGCAGAAACA+GGG | - | chr7.3:15215736-15215755 | MS.gene46312:intron | 35.0% | |
| CTAACGATGGGAAAAATTCA+AGG | + | chr7.3:15214997-15215016 | None:intergenic | 35.0% | |
| CTGAGGATATTGATATTCCA+TGG | - | chr7.3:15215964-15215983 | MS.gene46312:intron | 35.0% | |
| GAGATTGGAGAAACATTTAG+GGG | - | chr7.3:15215845-15215864 | MS.gene46312:intron | 35.0% | |
| GATATGAAGCAACCACTAAT+AGG | - | chr7.3:15217494-15217513 | MS.gene46312:CDS | 35.0% | |
| GCAAACTTTAATAACCACTC+AGG | + | chr7.3:15215945-15215964 | None:intergenic | 35.0% | |
| GGAGATTGGAGAAACATTTA+GGG | - | chr7.3:15215844-15215863 | MS.gene46312:intron | 35.0% | |
| GGGTTAAATGTTAGGGAAAA+TGG | - | chr7.3:15215756-15215775 | MS.gene46312:intron | 35.0% | |
| TCATTGGGCTTACTATTCAA+GGG | + | chr7.3:15216340-15216359 | None:intergenic | 35.0% | |
| TCGATCTTTCAACAACTCAT+TGG | + | chr7.3:15216356-15216375 | None:intergenic | 35.0% | |
| TGCACATGCAAATACGTAAT+TGG | + | chr7.3:15216140-15216159 | None:intergenic | 35.0% | |
| TGTTCGCTCCAATATTTATC+TGG | + | chr7.3:15215109-15215128 | None:intergenic | 35.0% | |
| TTACCAAGATATTCCTTGTC+CGG | - | chr7.3:15215518-15215537 | MS.gene46312:intron | 35.0% | |
| TTAGTTCGGATCGCATTATT+GGG | + | chr7.3:15214886-15214905 | None:intergenic | 35.0% | |
| TTCAAATCTTGCCTCCAATT+TGG | + | chr7.3:15217577-15217596 | None:intergenic | 35.0% | |
| TTGTGATTGGAGTTGTGTAA+TGG | + | chr7.3:15214762-15214781 | None:intergenic | 35.0% | |
| ! | AAGAAAGTGGATTCGGATTT+GGG | + | chr7.3:15214638-15214657 | None:intergenic | 35.0% |
| ! | AGAGCAGAAAGCACATAAAA+GGG | - | chr7.3:15216547-15216566 | MS.gene46312:CDS | 35.0% |
| ! | TAGAGCAGAAAGCACATAAA+AGG | - | chr7.3:15216546-15216565 | MS.gene46312:CDS | 35.0% |
| ! | TGTTGCTTCATCGTTTGAAA+CGG | + | chr7.3:15215155-15215174 | None:intergenic | 35.0% |
| !! | ACATAGTTTAGGAAGTGCTA+TGG | - | chr7.3:15215701-15215720 | MS.gene46312:intron | 35.0% |
| !! | GGTTTGTTGTTTGGAATTTG+AGG | + | chr7.3:15214682-15214701 | None:intergenic | 35.0% |
| !! | GTATAACTTTGATGATGAGC+AGG | - | chr7.3:15217452-15217471 | MS.gene46312:CDS | 35.0% |
| !! | GTGGTTATTAAAGTTTGCTG+AGG | - | chr7.3:15215947-15215966 | MS.gene46312:intron | 35.0% |
| !! | GTTGTGTAATGGTGTTGATT+TGG | + | chr7.3:15214751-15214770 | None:intergenic | 35.0% |
| !! | TAACATTTGCTGTGGCATAT+AGG | + | chr7.3:15215054-15215073 | None:intergenic | 35.0% |
| !! | TTGTTGTTTGGAATTTGAGG+TGG | + | chr7.3:15214679-15214698 | None:intergenic | 35.0% |
| !!! | ACCGTCTTTTTTGAGTCTAT+CGG | + | chr7.3:15215586-15215605 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCTATGGGAAGTT+CGG | + | chr7.3:15214810-15214829 | None:intergenic | 35.0% |
| !!! | TTTCGCCATGCTTTTTCTAT+GGG | + | chr7.3:15214818-15214837 | None:intergenic | 35.0% |
| !!! | TTTTCGCCATGCTTTTTCTA+TGG | + | chr7.3:15214819-15214838 | None:intergenic | 35.0% |
| AAAGCATGGCGAAAAATCCA+CGG | - | chr7.3:15214824-15214843 | MS.gene46312:CDS | 40.0% | |
| AAATCCACGGTGAAGATGAT+TGG | - | chr7.3:15214837-15214856 | MS.gene46312:intron | 40.0% | |
| AAATCTTGCCTCCAATTTGG+TGG | + | chr7.3:15217574-15217593 | None:intergenic | 40.0% | |
| AACCGTTACTCATGTCGAAT+GGG | - | chr7.3:15215464-15215483 | MS.gene46312:intron | 40.0% | |
| AATATGGTGAAGACCGAAGA+TGG | - | chr7.3:15217601-15217620 | MS.gene46312:CDS | 40.0% | |
| AATCCACGGTGAAGATGATT+GGG | - | chr7.3:15214838-15214857 | MS.gene46312:intron | 40.0% | |
| AATTTCATGTTCCCAACCCT+AGG | + | chr7.3:15215819-15215838 | None:intergenic | 40.0% | |
| ACGTTAACGGGACATAGTTT+AGG | - | chr7.3:15215690-15215709 | MS.gene46312:intron | 40.0% | |
| ACTAACACACAACGATGATC+AGG | - | chr7.3:15216691-15216710 | MS.gene46312:CDS | 40.0% | |
| AGTCCTATCTGAGAGAGATA+AGG | + | chr7.3:15217685-15217704 | None:intergenic | 40.0% | |
| ATAAGAAACCCTGGTGACTT+TGG | + | chr7.3:15215909-15215928 | None:intergenic | 40.0% | |
| ATAATATATGAAGGGGCAGG+GGG | - | chr7.3:15217039-15217058 | MS.gene46312:intron | 40.0% | |
| ATGTGTGGAAGATCTAACGA+TGG | + | chr7.3:15215010-15215029 | None:intergenic | 40.0% | |
| CAAAGCAATGTCCCTATTAG+TGG | + | chr7.3:15217509-15217528 | None:intergenic | 40.0% | |
| CAAATGCATCATAACAGGCT+TGG | + | chr7.3:15214928-15214947 | None:intergenic | 40.0% | |
| CACTAATAGGGACATTGCTT+TGG | - | chr7.3:15217507-15217526 | MS.gene46312:CDS | 40.0% | |
| CATAATATATGAAGGGGCAG+GGG | - | chr7.3:15217038-15217057 | MS.gene46312:intron | 40.0% | |
| CATTGGGCTTACTATTCAAG+GGG | + | chr7.3:15216339-15216358 | None:intergenic | 40.0% | |
| CCAACATGAGTATAACACCA+TGG | + | chr7.3:15215984-15216003 | None:intergenic | 40.0% | |
| CGTTAGATCTTCCACACATA+GGG | - | chr7.3:15215011-15215030 | MS.gene46312:intron | 40.0% | |
| CTCATTGGGCTTACTATTCA+AGG | + | chr7.3:15216341-15216360 | None:intergenic | 40.0% | |
| CTCGATGGCCAGATAAATAT+TGG | - | chr7.3:15215098-15215117 | MS.gene46312:intron | 40.0% | |
| GATGAGTATCTGCAAGTTGT+GGG | + | chr7.3:15217648-15217667 | None:intergenic | 40.0% | |
| GATGGGAAAAATTCAAGGTG+TGG | + | chr7.3:15214992-15215011 | None:intergenic | 40.0% | |
| GCATAATATATGAAGGGGCA+GGG | - | chr7.3:15217037-15217056 | MS.gene46312:intron | 40.0% | |
| GCGTTTGATATAGCAGAAAC+AGG | - | chr7.3:15215735-15215754 | MS.gene46312:intron | 40.0% | |
| GGACATTGCTTTGGTGAATA+AGG | - | chr7.3:15217516-15217535 | MS.gene46312:CDS | 40.0% | |
| GGGAGATTGGAGAAACATTT+AGG | - | chr7.3:15215843-15215862 | MS.gene46312:intron | 40.0% | |
| TACCCATTCGACATGAGTAA+CGG | + | chr7.3:15215469-15215488 | None:intergenic | 40.0% | |
| TAGTGGTTGCTTCATATCCA+CGG | + | chr7.3:15217492-15217511 | None:intergenic | 40.0% | |
| TCCGAATCCACTTTCTTCTT+CGG | - | chr7.3:15214641-15214660 | MS.gene46312:CDS | 40.0% | |
| TCGTTAGATCTTCCACACAT+AGG | - | chr7.3:15215010-15215029 | MS.gene46312:intron | 40.0% | |
| TCGTTATTTATGGCGTCTAG+TGG | - | chr7.3:15216618-15216637 | MS.gene46312:CDS | 40.0% | |
| TGAACTTAGCTCAGTTGTCA+GGG | - | chr7.3:15217008-15217027 | MS.gene46312:intron | 40.0% | |
| TGACAACTGAGCTAAGTTCA+CGG | + | chr7.3:15217008-15217027 | None:intergenic | 40.0% | |
| TGATGAGTATCTGCAAGTTG+TGG | + | chr7.3:15217649-15217668 | None:intergenic | 40.0% | |
| TGCATAATATATGAAGGGGC+AGG | - | chr7.3:15217036-15217055 | MS.gene46312:intron | 40.0% | |
| TGTGTGGAAGATCTAACGAT+GGG | + | chr7.3:15215009-15215028 | None:intergenic | 40.0% | |
| TGTTGGAGTTGAGTTAGAGT+TGG | - | chr7.3:15215998-15216017 | MS.gene46312:intron | 40.0% | |
| TTAATGAGAAATCGCCTGAG+TGG | - | chr7.3:15215928-15215947 | MS.gene46312:intron | 40.0% | |
| ! | CCCTAAAACTTGTTCTCTTG+CGG | + | chr7.3:15215622-15215641 | None:intergenic | 40.0% |
| ! | CCGCAAGAGAACAAGTTTTA+GGG | - | chr7.3:15215619-15215638 | MS.gene46312:intron | 40.0% |
| ! | GAAGAAAGTGGATTCGGATT+TGG | + | chr7.3:15214639-15214658 | None:intergenic | 40.0% |
| ! | GAGCAGAAAGCACATAAAAG+GGG | - | chr7.3:15216548-15216567 | MS.gene46312:CDS | 40.0% |
| ! | GCAGAGACATTGTTATTGCT+TGG | - | chr7.3:15215436-15215455 | MS.gene46312:intron | 40.0% |
| ! | TCCGAAGAAGAAAGTGGATT+CGG | + | chr7.3:15214645-15214664 | None:intergenic | 40.0% |
| ! | TCCGCAAGAGAACAAGTTTT+AGG | - | chr7.3:15215618-15215637 | MS.gene46312:intron | 40.0% |
| ! | TGTTTGGAATTTGAGGTGGT+TGG | + | chr7.3:15214675-15214694 | None:intergenic | 40.0% |
| !! | AATGGTGTTGATTTGGGATG+CGG | + | chr7.3:15214744-15214763 | None:intergenic | 40.0% |
| !! | CCATGGTGTTATACTCATGT+TGG | - | chr7.3:15215981-15216000 | MS.gene46312:intron | 40.0% |
| !! | CGCAAGAGAACAAGTTTTAG+GGG | - | chr7.3:15215620-15215639 | MS.gene46312:intron | 40.0% |
| !! | CTTTTGATTCATAGGTCGTG+GGG | + | chr7.3:15217367-15217386 | None:intergenic | 40.0% |
| !! | GCTTTTGATTCATAGGTCGT+GGG | + | chr7.3:15217368-15217387 | None:intergenic | 40.0% |
| !! | TGCTTTTGATTCATAGGTCG+TGG | + | chr7.3:15217369-15217388 | None:intergenic | 40.0% |
| !! | TTCTCCGTAACGGATTAGTT+CGG | + | chr7.3:15214900-15214919 | None:intergenic | 40.0% |
| !!! | AAGTTTTAGGGGAAGTGAGA+AGG | - | chr7.3:15215631-15215650 | MS.gene46312:intron | 40.0% |
| ACAACTGAGCTAAGTTCACG+GGG | + | chr7.3:15217006-15217025 | None:intergenic | 45.0% | |
| ATAAAAGGGGACCAGTTGTC+CGG | - | chr7.3:15216561-15216580 | MS.gene46312:CDS | 45.0% | |
| ATATGGAGAAGTGGTGTGTC+TGG | + | chr7.3:15217073-15217092 | None:intergenic | 45.0% | |
| ATTCCGACCTATCCACTTCA+CGG | - | chr7.3:15216763-15216782 | MS.gene46312:CDS | 45.0% | |
| CGATCCGAACTAATCCGTTA+CGG | - | chr7.3:15214893-15214912 | MS.gene46312:intron | 45.0% | |
| GAACCGTTACTCATGTCGAA+TGG | - | chr7.3:15215463-15215482 | MS.gene46312:intron | 45.0% | |
| GACAACTGAGCTAAGTTCAC+GGG | + | chr7.3:15217007-15217026 | None:intergenic | 45.0% | |
| GATCGCATTATTGGGTCCAT+TGG | + | chr7.3:15214878-15214897 | None:intergenic | 45.0% | |
| GGTTGGACTTCTAGATCCAA+TGG | - | chr7.3:15214859-15214878 | MS.gene46312:intron | 45.0% | |
| GTGAACTTAGCTCAGTTGTC+AGG | - | chr7.3:15217007-15217026 | MS.gene46312:intron | 45.0% | |
| GTTACGTCATACCCTATGTG+TGG | + | chr7.3:15215025-15215044 | None:intergenic | 45.0% | |
| TATGGAGAAGTGGTGTGTCT+GGG | + | chr7.3:15217072-15217091 | None:intergenic | 45.0% | |
| TGCATGTGCTCATAACTTGG+AGG | - | chr7.3:15216061-15216080 | MS.gene46312:intron | 45.0% | |
| TGCTGCATGTGCTCATAACT+TGG | - | chr7.3:15216058-15216077 | MS.gene46312:intron | 45.0% | |
| TGTCCGGACAAGGAATATCT+TGG | + | chr7.3:15215524-15215543 | None:intergenic | 45.0% | |
| TTAAGACAGTGACCGTGAAG+TGG | + | chr7.3:15216778-15216797 | None:intergenic | 45.0% | |
| ! | AGTGGATTCGGATTTGGGAA+AGG | + | chr7.3:15214633-15214652 | None:intergenic | 45.0% |
| ! | ATATGGTGCCAAAGTCACCA+GGG | - | chr7.3:15215898-15215917 | MS.gene46312:intron | 45.0% |
| ! | CATTTTCTGGACCTAGGGTT+GGG | - | chr7.3:15215805-15215824 | MS.gene46312:intron | 45.0% |
| ! | CTTGGGACTTTTCTCCGTAA+CGG | + | chr7.3:15214910-15214929 | None:intergenic | 45.0% |
| ! | GACATTGTTATTGCTTGGCG+AGG | - | chr7.3:15215441-15215460 | MS.gene46312:intron | 45.0% |
| ! | GAGCCTTATCTCTCTCAGAT+AGG | - | chr7.3:15217679-15217698 | MS.gene46312:CDS | 45.0% |
| ! | TCATTTTCTGGACCTAGGGT+TGG | - | chr7.3:15215804-15215823 | MS.gene46312:intron | 45.0% |
| ! | TGATGATGAGCAGGTACCAT+GGG | - | chr7.3:15217461-15217480 | MS.gene46312:CDS | 45.0% |
| ! | TGGGACGTTAACATTTGCTG+TGG | + | chr7.3:15215062-15215081 | None:intergenic | 45.0% |
| ! | TTGGGATGCGGAACATTTTG+TGG | + | chr7.3:15214732-15214751 | None:intergenic | 45.0% |
| !! | GGGTTTGTGGGTTTGTTGTT+TGG | + | chr7.3:15214691-15214710 | None:intergenic | 45.0% |
| !! | TTGATGATGAGCAGGTACCA+TGG | - | chr7.3:15217460-15217479 | MS.gene46312:CDS | 45.0% |
| !! | AAAAAAATAGTATTAAAATT+TGG | + | chr7.3:15216384-15216403 | None:intergenic | 5.0% |
| !! | AAACTAAAAAATTTAAATAT+GGG | - | chr7.3:15216426-15216445 | MS.gene46312:CDS | 5.0% |
| !! | AAATATATATAAGAAATAAT+TGG | - | chr7.3:15215246-15215265 | MS.gene46312:intron | 5.0% |
| !!! | TTTTTAAATATTTCTAAAAA+TGG | + | chr7.3:15216207-15216226 | None:intergenic | 5.0% |
| AACGACGTTCGAGTAGAAGC+AGG | - | chr7.3:15215543-15215562 | MS.gene46312:intron | 50.0% | |
| AAGTGGATAGGTCGGAATGG+AGG | + | chr7.3:15216761-15216780 | None:intergenic | 50.0% | |
| ACAGTGACCGTGAAGTGGAT+AGG | + | chr7.3:15216773-15216792 | None:intergenic | 50.0% | |
| ACCCATCGAGTATGTGCAAG+TGG | + | chr7.3:15216088-15216107 | None:intergenic | 50.0% | |
| ACTCTGTGCCACCAAATTGG+AGG | - | chr7.3:15217563-15217582 | MS.gene46312:CDS | 50.0% | |
| AGCACTCTGTGCCACCAAAT+TGG | - | chr7.3:15217560-15217579 | MS.gene46312:CDS | 50.0% | |
| AGCGAACACGCGAATTGGAT+GGG | - | chr7.3:15215121-15215140 | MS.gene46312:intron | 50.0% | |
| ATGGAGAAGTGGTGTGTCTG+GGG | + | chr7.3:15217071-15217090 | None:intergenic | 50.0% | |
| ATGTGTGAGCTCCAGTCACT+AGG | - | chr7.3:15217098-15217117 | MS.gene46312:intron | 50.0% | |
| ATTGGAGCGAACACGCGAAT+TGG | - | chr7.3:15215116-15215135 | MS.gene46312:intron | 50.0% | |
| CAACCCAATCATCTTCACCG+TGG | + | chr7.3:15214844-15214863 | None:intergenic | 50.0% | |
| CACGGTGAAGATGATTGGGT+TGG | - | chr7.3:15214842-15214861 | MS.gene46312:intron | 50.0% | |
| CCCACTTGCACATACTCGAT+GGG | - | chr7.3:15216084-15216103 | MS.gene46312:intron | 50.0% | |
| CCCATCGAGTATGTGCAAGT+GGG | + | chr7.3:15216087-15216106 | None:intergenic | 50.0% | |
| GAAGACCGAAGATGGACGTT+GGG | - | chr7.3:15217609-15217628 | MS.gene46312:CDS | 50.0% | |
| GCACATGCAGCATCAGCATT+AGG | + | chr7.3:15216050-15216069 | None:intergenic | 50.0% | |
| GTGAAGTGGATAGGTCGGAA+TGG | + | chr7.3:15216764-15216783 | None:intergenic | 50.0% | |
| TAGGATTCTTGCCGGACAAC+TGG | + | chr7.3:15216575-15216594 | None:intergenic | 50.0% | |
| TCGGAATGGAGGTCTCTTTG+TGG | + | chr7.3:15216750-15216769 | None:intergenic | 50.0% | |
| TCTACTCGAACGTCGTTGTC+CGG | + | chr7.3:15215540-15215559 | None:intergenic | 50.0% | |
| TGAAGACCGAAGATGGACGT+TGG | - | chr7.3:15217608-15217627 | MS.gene46312:CDS | 50.0% | |
| TGACCGTGAAGTGGATAGGT+CGG | + | chr7.3:15216769-15216788 | None:intergenic | 50.0% | |
| TGGTCAAGTAGCCTAGTGAC+TGG | + | chr7.3:15217112-15217131 | None:intergenic | 50.0% | |
| ! | GATATGGTGCCAAAGTCACC+AGG | - | chr7.3:15215897-15215916 | MS.gene46312:intron | 50.0% |
| CAGCACCCAACGTCCATCTT+CGG | + | chr7.3:15217617-15217636 | None:intergenic | 55.0% | |
| CATATCCACGGTTGCTCCCA+TGG | + | chr7.3:15217480-15217499 | None:intergenic | 55.0% | |
| GAGCGAACACGCGAATTGGA+TGG | - | chr7.3:15215120-15215139 | MS.gene46312:intron | 55.0% | |
| GCCCACTTGCACATACTCGA+TGG | - | chr7.3:15216083-15216102 | MS.gene46312:intron | 55.0% | |
| AGGTACCATGGGAGCAACCG+TGG | - | chr7.3:15217472-15217491 | MS.gene46312:CDS | 60.0% | |
| CGAACGTCGTTGTCCGGACA+AGG | + | chr7.3:15215534-15215553 | None:intergenic | 60.0% | |
| CGAAGATGGACGTTGGGTGC+TGG | - | chr7.3:15217615-15217634 | MS.gene46312:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 15214599 | 15217726 | 15214599 | ID=MS.gene46312 |
| chr7.3 | mRNA | 15214599 | 15217726 | 15214599 | ID=MS.gene46312.t1;Parent=MS.gene46312 |
| chr7.3 | exon | 15217141 | 15217726 | 15217141 | ID=MS.gene46312.t1.exon1;Parent=MS.gene46312.t1 |
| chr7.3 | CDS | 15217141 | 15217726 | 15217141 | ID=cds.MS.gene46312.t1;Parent=MS.gene46312.t1 |
| chr7.3 | exon | 15216220 | 15216892 | 15216220 | ID=MS.gene46312.t1.exon2;Parent=MS.gene46312.t1 |
| chr7.3 | CDS | 15216220 | 15216892 | 15216220 | ID=cds.MS.gene46312.t1;Parent=MS.gene46312.t1 |
| chr7.3 | exon | 15214599 | 15214851 | 15214599 | ID=MS.gene46312.t1.exon3;Parent=MS.gene46312.t1 |
| chr7.3 | CDS | 15214599 | 15214851 | 15214599 | ID=cds.MS.gene46312.t1;Parent=MS.gene46312.t1 |
| Gene Sequence |
| Protein sequence |
