Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068612.t1 | XP_003612986.1 | 97.2 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 4.00E-205 | 723.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068612.t1 | Q9ZRF1 | 78.4 | 348 | 75 | 0 | 13 | 360 | 9 | 356 | 2.3e-164 | 579.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068612.t1 | G7KGI9 | 97.2 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 2.9e-205 | 723.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene068612 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene068612 | 0.807736 | 4.37E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene068612 | 0.814665 | 1.37E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene068612 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene049993 | MS.gene068612 | 0.832246 | 1.05E-55 | -1.69E-46 |
| MS.gene050397 | MS.gene068612 | 0.834509 | 2.88E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene068612 | -0.803139 | 4.02E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene068612 | 0.821197 | 4.59E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene068612 | 0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene068612 | 0.834128 | 3.59E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene068612 | 0.838007 | 3.71E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene068612 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene068612 | -0.869285 | 3.47E-66 | -1.69E-46 |
| MS.gene052025 | MS.gene068612 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene068612 | 0.81338 | 2.64E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene068612 | 0.850057 | 2.17E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene068612 | 0.80307 | 4.15E-49 | -1.69E-46 |
| MS.gene052711 | MS.gene068612 | 0.807909 | 4.02E-50 | -1.69E-46 |
| MS.gene052767 | MS.gene068612 | 0.819041 | 1.43E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene068612 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene068612 | 0.838179 | 3.35E-57 | -1.69E-46 |
| MS.gene053873 | MS.gene068612 | 0.8141 | 1.83E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene068612 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene054173 | MS.gene068612 | 0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene068612 | 0.834368 | 3.12E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene068612 | 0.840545 | 8.15E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene068612 | 0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene054917 | MS.gene068612 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene054918 | MS.gene068612 | 0.872246 | 3.69E-67 | -1.69E-46 |
| MS.gene054920 | MS.gene068612 | 0.801122 | 1.05E-48 | -1.69E-46 |
| MS.gene054983 | MS.gene068612 | 0.81004 | 1.40E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene068612 | 0.849057 | 4.13E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene068612 | 0.804748 | 1.86E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene068612 | 0.84155 | 4.44E-58 | -1.69E-46 |
| MS.gene05594 | MS.gene068612 | 0.808528 | 2.96E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene068612 | 0.822316 | 2.53E-53 | -1.69E-46 |
| MS.gene056337 | MS.gene068612 | 0.863842 | 1.87E-64 | -1.69E-46 |
| MS.gene056407 | MS.gene068612 | 0.821582 | 3.74E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene068612 | 0.809927 | 1.49E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene068612 | -0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene068612 | 0.844176 | 8.89E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene068612 | 0.812005 | 5.27E-51 | -1.69E-46 |
| MS.gene057310 | MS.gene068612 | 0.803643 | 3.16E-49 | -1.69E-46 |
| MS.gene057476 | MS.gene068612 | 0.828553 | 8.43E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene068612 | 0.840843 | 6.81E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene068612 | 0.831489 | 1.62E-55 | -1.69E-46 |
| MS.gene057825 | MS.gene068612 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene057888 | MS.gene068612 | 0.807666 | 4.52E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene068612 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene068612 | 0.820897 | 5.38E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene068612 | 0.849482 | 3.14E-60 | -1.69E-46 |
| MS.gene058746 | MS.gene068612 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene068612 | 0.830809 | 2.38E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene068612 | 0.814578 | 1.43E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene068612 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene068612 | 0.802013 | 6.86E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene068612 | 0.840639 | 7.70E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene068612 | 0.81365 | 2.30E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene068612 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene068612 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene068612 | 0.818091 | 2.35E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene068612 | 0.828597 | 8.23E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene068612 | 0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene068612 | -0.822671 | 2.09E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068612.t1 | MTR_5g031360 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 727 |
| MS.gene068612.t1 | MTR_5g031310 | 87.879 | 363 | 43 | 1 | 1 | 363 | 1 | 362 | 0.0 | 639 |
| MS.gene068612.t1 | MTR_5g031305 | 85.475 | 358 | 52 | 0 | 6 | 363 | 5 | 362 | 0.0 | 628 |
| MS.gene068612.t1 | MTR_5g031300 | 78.652 | 356 | 76 | 0 | 7 | 362 | 6 | 361 | 0.0 | 578 |
| MS.gene068612.t1 | MTR_5g031390 | 81.143 | 350 | 66 | 0 | 13 | 362 | 11 | 360 | 0.0 | 575 |
| MS.gene068612.t1 | MTR_4g115300 | 78.063 | 351 | 77 | 0 | 12 | 362 | 10 | 360 | 0.0 | 568 |
| MS.gene068612.t1 | MTR_5g031230 | 78.063 | 351 | 77 | 0 | 12 | 362 | 10 | 360 | 0.0 | 564 |
| MS.gene068612.t1 | MTR_5g031250 | 77.493 | 351 | 79 | 0 | 12 | 362 | 10 | 360 | 0.0 | 556 |
| MS.gene068612.t1 | MTR_5g031190 | 76.068 | 351 | 84 | 0 | 12 | 362 | 10 | 360 | 0.0 | 551 |
| MS.gene068612.t1 | MTR_5g031210 | 76.353 | 351 | 83 | 0 | 12 | 362 | 10 | 360 | 0.0 | 542 |
| MS.gene068612.t1 | MTR_5g031180 | 77.208 | 351 | 80 | 0 | 12 | 362 | 10 | 360 | 0.0 | 526 |
| MS.gene068612.t1 | MTR_8g068190 | 78.063 | 351 | 77 | 0 | 12 | 362 | 10 | 360 | 0.0 | 525 |
| MS.gene068612.t1 | MTR_8g092630 | 63.873 | 346 | 124 | 1 | 14 | 359 | 69 | 413 | 6.84e-153 | 437 |
| MS.gene068612.t1 | MTR_5g031430 | 60.870 | 345 | 135 | 0 | 16 | 360 | 14 | 358 | 1.97e-146 | 418 |
| MS.gene068612.t1 | MTR_1g025950 | 59.184 | 343 | 139 | 1 | 17 | 358 | 14 | 356 | 5.91e-136 | 392 |
| MS.gene068612.t1 | MTR_5g031250 | 79.310 | 232 | 48 | 0 | 12 | 243 | 10 | 241 | 5.61e-133 | 380 |
| MS.gene068612.t1 | MTR_1g107425 | 52.436 | 349 | 166 | 0 | 10 | 358 | 6 | 354 | 5.40e-125 | 363 |
| MS.gene068612.t1 | MTR_2g009810 | 53.009 | 349 | 162 | 2 | 13 | 360 | 59 | 406 | 2.52e-117 | 346 |
| MS.gene068612.t1 | MTR_1g107425 | 53.763 | 279 | 129 | 0 | 10 | 288 | 6 | 284 | 2.11e-98 | 294 |
| MS.gene068612.t1 | MTR_2g009820 | 51.046 | 239 | 114 | 2 | 125 | 360 | 16 | 254 | 2.71e-65 | 207 |
| MS.gene068612.t1 | MTR_5g031290 | 73.913 | 115 | 30 | 0 | 249 | 363 | 80 | 194 | 1.10e-52 | 173 |
| MS.gene068612.t1 | MTR_5g031290 | 80.282 | 71 | 13 | 1 | 12 | 81 | 10 | 80 | 3.66e-34 | 125 |
| MS.gene068612.t1 | MTR_8g095220 | 26.849 | 365 | 223 | 14 | 27 | 355 | 68 | 424 | 2.43e-23 | 100 |
| MS.gene068612.t1 | MTR_8g095220 | 29.583 | 240 | 142 | 9 | 27 | 244 | 68 | 302 | 6.87e-23 | 97.8 |
| MS.gene068612.t1 | MTR_0001s0660 | 26.769 | 325 | 203 | 11 | 40 | 333 | 35 | 355 | 7.10e-20 | 90.9 |
| MS.gene068612.t1 | MTR_5g045710 | 24.633 | 341 | 210 | 10 | 40 | 344 | 35 | 364 | 1.12e-15 | 77.8 |
| MS.gene068612.t1 | MTR_3g089977 | 21.965 | 346 | 237 | 9 | 41 | 356 | 37 | 379 | 6.86e-15 | 75.5 |
| MS.gene068612.t1 | MTR_6g466320 | 26.457 | 223 | 148 | 6 | 17 | 235 | 19 | 229 | 1.26e-14 | 74.7 |
| MS.gene068612.t1 | MTR_6g465010 | 26.457 | 223 | 148 | 6 | 17 | 235 | 19 | 229 | 1.26e-14 | 74.7 |
| MS.gene068612.t1 | MTR_6g465010 | 26.457 | 223 | 148 | 6 | 17 | 235 | 3 | 213 | 1.28e-14 | 74.7 |
| MS.gene068612.t1 | MTR_3g089940 | 22.024 | 336 | 230 | 8 | 41 | 346 | 37 | 370 | 2.04e-14 | 74.3 |
| MS.gene068612.t1 | MTR_3g089940 | 22.024 | 336 | 230 | 8 | 41 | 346 | 37 | 370 | 2.14e-14 | 73.9 |
| MS.gene068612.t1 | MTR_3g089970 | 21.726 | 336 | 231 | 7 | 41 | 346 | 38 | 371 | 1.42e-13 | 71.6 |
| MS.gene068612.t1 | MTR_3g079180 | 26.510 | 298 | 187 | 11 | 40 | 309 | 40 | 333 | 5.63e-13 | 69.7 |
| MS.gene068612.t1 | MTR_3g089940 | 23.707 | 232 | 159 | 3 | 41 | 255 | 37 | 267 | 6.73e-13 | 69.3 |
| MS.gene068612.t1 | MTR_3g089940 | 23.707 | 232 | 159 | 3 | 41 | 255 | 37 | 267 | 7.38e-13 | 69.3 |
| MS.gene068612.t1 | MTR_7g068320 | 24.561 | 342 | 216 | 11 | 41 | 345 | 48 | 384 | 1.20e-12 | 68.9 |
| MS.gene068612.t1 | MTR_7g068330 | 26.239 | 343 | 208 | 14 | 41 | 345 | 41 | 376 | 1.57e-12 | 68.6 |
| MS.gene068612.t1 | MTR_5g087710 | 24.058 | 345 | 214 | 11 | 41 | 346 | 46 | 381 | 3.13e-12 | 67.8 |
| MS.gene068612.t1 | MTR_5g031380 | 60.465 | 43 | 17 | 0 | 82 | 124 | 19 | 61 | 5.13e-12 | 62.4 |
| MS.gene068612.t1 | MTR_1g069430 | 25.397 | 315 | 204 | 8 | 41 | 329 | 36 | 345 | 6.54e-12 | 66.6 |
| MS.gene068612.t1 | MTR_3g099460 | 25.484 | 310 | 199 | 10 | 41 | 321 | 37 | 343 | 1.34e-11 | 65.9 |
| MS.gene068612.t1 | MTR_3g099460 | 25.484 | 310 | 199 | 10 | 41 | 321 | 44 | 350 | 1.39e-11 | 65.9 |
| MS.gene068612.t1 | MTR_7g099040 | 23.734 | 316 | 210 | 8 | 40 | 329 | 37 | 347 | 5.65e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068612.t1 | AT4G37980 | 70.339 | 354 | 105 | 0 | 10 | 363 | 4 | 357 | 3.35e-174 | 489 |
| MS.gene068612.t1 | AT4G37990 | 70.621 | 354 | 104 | 0 | 10 | 363 | 4 | 357 | 9.97e-172 | 483 |
| MS.gene068612.t1 | AT4G37970 | 64.470 | 349 | 124 | 0 | 14 | 362 | 13 | 361 | 1.28e-166 | 469 |
| MS.gene068612.t1 | AT4G39330 | 60.000 | 350 | 140 | 0 | 12 | 361 | 10 | 359 | 5.57e-158 | 447 |
| MS.gene068612.t1 | AT2G21730 | 58.873 | 355 | 144 | 2 | 9 | 361 | 1 | 355 | 1.01e-150 | 430 |
| MS.gene068612.t1 | AT2G21890 | 57.910 | 354 | 148 | 1 | 9 | 361 | 1 | 354 | 3.03e-150 | 429 |
| MS.gene068612.t1 | AT4G37980 | 70.732 | 287 | 84 | 0 | 10 | 296 | 4 | 290 | 3.08e-133 | 382 |
| MS.gene068612.t1 | AT4G37970 | 62.898 | 283 | 105 | 0 | 14 | 296 | 13 | 295 | 1.63e-127 | 368 |
| MS.gene068612.t1 | AT4G39330 | 58.503 | 294 | 122 | 0 | 12 | 305 | 10 | 303 | 4.14e-125 | 362 |
| MS.gene068612.t1 | AT3G19450 | 54.046 | 346 | 159 | 0 | 13 | 358 | 9 | 354 | 1.10e-118 | 348 |
| MS.gene068612.t1 | AT1G72680 | 50.146 | 343 | 170 | 1 | 18 | 360 | 14 | 355 | 1.36e-112 | 332 |
| MS.gene068612.t1 | AT4G34230 | 51.445 | 346 | 168 | 0 | 13 | 358 | 8 | 353 | 6.22e-107 | 318 |
| MS.gene068612.t1 | AT4G34230 | 51.156 | 346 | 169 | 0 | 13 | 358 | 8 | 353 | 5.65e-106 | 315 |
| MS.gene068612.t1 | AT4G37970 | 62.393 | 234 | 88 | 0 | 14 | 247 | 13 | 246 | 9.43e-103 | 303 |
| MS.gene068612.t1 | AT4G37970 | 62.771 | 231 | 86 | 0 | 14 | 244 | 13 | 243 | 5.51e-102 | 301 |
| MS.gene068612.t1 | AT5G63620 | 28.571 | 280 | 170 | 8 | 27 | 280 | 70 | 345 | 2.52e-25 | 106 |
| MS.gene068612.t1 | AT5G63620 | 26.039 | 361 | 231 | 10 | 27 | 355 | 70 | 426 | 2.97e-25 | 106 |
| MS.gene068612.t1 | AT5G63620 | 29.289 | 239 | 144 | 7 | 27 | 244 | 70 | 304 | 2.19e-24 | 102 |
| MS.gene068612.t1 | AT5G43940 | 25.648 | 347 | 219 | 10 | 41 | 354 | 36 | 376 | 4.26e-18 | 85.1 |
| MS.gene068612.t1 | AT5G43940 | 25.648 | 347 | 219 | 10 | 41 | 354 | 48 | 388 | 4.82e-18 | 85.1 |
| MS.gene068612.t1 | AT1G22430 | 27.273 | 297 | 185 | 9 | 41 | 309 | 42 | 335 | 6.45e-18 | 84.7 |
| MS.gene068612.t1 | AT1G22430 | 27.273 | 297 | 185 | 9 | 41 | 309 | 42 | 335 | 6.45e-18 | 84.7 |
| MS.gene068612.t1 | AT1G64710 | 25.959 | 339 | 214 | 13 | 41 | 345 | 13 | 348 | 4.00e-17 | 82.0 |
| MS.gene068612.t1 | AT1G64710 | 25.145 | 346 | 208 | 13 | 41 | 345 | 36 | 371 | 4.89e-17 | 82.0 |
| MS.gene068612.t1 | AT1G32780 | 25.762 | 361 | 223 | 12 | 41 | 360 | 37 | 393 | 2.30e-16 | 80.1 |
| MS.gene068612.t1 | AT1G22440 | 23.768 | 345 | 216 | 13 | 41 | 346 | 40 | 376 | 4.29e-16 | 79.3 |
| MS.gene068612.t1 | AT5G51970 | 24.904 | 261 | 175 | 6 | 32 | 280 | 34 | 285 | 8.24e-16 | 78.2 |
| MS.gene068612.t1 | AT5G51970 | 24.904 | 261 | 175 | 6 | 32 | 280 | 34 | 285 | 8.24e-16 | 78.2 |
| MS.gene068612.t1 | AT1G22430 | 26.633 | 199 | 127 | 5 | 41 | 221 | 42 | 239 | 2.07e-14 | 73.6 |
| MS.gene068612.t1 | AT1G22430 | 26.633 | 199 | 127 | 5 | 41 | 221 | 42 | 239 | 3.26e-14 | 72.8 |
| MS.gene068612.t1 | AT1G22430 | 26.633 | 199 | 127 | 5 | 41 | 221 | 42 | 239 | 3.26e-14 | 72.8 |
| MS.gene068612.t1 | AT4G22110 | 24.269 | 342 | 216 | 14 | 41 | 345 | 43 | 378 | 3.78e-14 | 73.6 |
| MS.gene068612.t1 | AT4G22110 | 24.269 | 342 | 216 | 14 | 41 | 345 | 43 | 378 | 3.78e-14 | 73.6 |
| MS.gene068612.t1 | AT1G77120 | 22.609 | 345 | 236 | 9 | 41 | 356 | 36 | 378 | 8.10e-14 | 72.4 |
| MS.gene068612.t1 | AT5G42250 | 24.432 | 352 | 224 | 13 | 41 | 356 | 45 | 390 | 4.01e-13 | 70.5 |
| MS.gene068612.t1 | AT4G22110 | 24.623 | 199 | 131 | 6 | 41 | 221 | 43 | 240 | 1.77e-11 | 64.7 |
Find 91 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATGTTTGAGTATATTT+AGG | 0.119813 | 5.1:+21585065 | None:intergenic |
| TCAATAGCTGGAAGTTTAAT+TGG | 0.184530 | 5.1:-21584333 | MS.gene068612:CDS |
| TATAGTCCTCTTCGACATTT+TGG | 0.197168 | 5.1:-21584903 | MS.gene068612:CDS |
| TATCGATTCGTGATTGATAT+TGG | 0.245698 | 5.1:-21584183 | MS.gene068612:CDS |
| CCCCTTTCCATTTCTTTAGA+AGG | 0.260521 | 5.1:-21586027 | MS.gene068612:intron |
| GTGAAATTTGCTAAAGCTTT+TGG | 0.271062 | 5.1:-21584819 | MS.gene068612:CDS |
| ATTGGTTTATTGAAATCTAA+TGG | 0.271827 | 5.1:-21584533 | MS.gene068612:CDS |
| CCTGATAGCTTACCTCTTGA+TGG | 0.285941 | 5.1:-21584960 | MS.gene068612:CDS |
| AATTAGTACATCGCCTAAAA+AGG | 0.289281 | 5.1:-21584781 | MS.gene068612:CDS |
| TCTTGGTGGACTTGGTCATA+TGG | 0.309264 | 5.1:-21584844 | MS.gene068612:CDS |
| TGAATGTTTGAGTATATTTA+GGG | 0.324279 | 5.1:+21585066 | None:intergenic |
| GCCCATCCAAAGGCCTTCTT+AGG | 0.354227 | 5.1:+21586076 | None:intergenic |
| TTTAGGCGATGTACTAATTA+CGG | 0.366491 | 5.1:+21584785 | None:intergenic |
| GCCGGTCCTCTTCTTTGCGC+TGG | 0.367778 | 5.1:-21584936 | MS.gene068612:CDS |
| AAGTTTAATTGGAGGGATAA+AGG | 0.373525 | 5.1:-21584322 | MS.gene068612:CDS |
| CATCAAAACTTCAGGGAAAC+AGG | 0.379283 | 5.1:-21585546 | MS.gene068612:intron |
| AAACCAATCAATGGTAAAAC+AGG | 0.382671 | 5.1:+21584548 | None:intergenic |
| GTGTTTCCTAAGAAGGCCTT+TGG | 0.389768 | 5.1:-21586082 | MS.gene068612:CDS |
| AAGTGAACCTTCTAAAGAAA+TGG | 0.391377 | 5.1:+21586020 | None:intergenic |
| TAAATACAGGCACGAACTTA+CGG | 0.392066 | 5.1:-21585213 | MS.gene068612:intron |
| AAAACATACCCCGGGACTAA+TGG | 0.397804 | 5.1:+21585432 | None:intergenic |
| TTTAAAGTTGGAGACAAAGT+AGG | 0.401632 | 5.1:-21585155 | MS.gene068612:CDS |
| GTTGTTGGTCTTGGTGGACT+TGG | 0.406204 | 5.1:-21584852 | MS.gene068612:CDS |
| CCATCAAGAGGTAAGCTATC+AGG | 0.415030 | 5.1:+21584960 | None:intergenic |
| AAATGTACCTGCATCTGATC+TGG | 0.416120 | 5.1:+21584705 | None:intergenic |
| ATAGGAGTTGTTGGTCTTGG+TGG | 0.419786 | 5.1:-21584858 | MS.gene068612:CDS |
| TGGGCAGCTAGGGACTCTTC+TGG | 0.423900 | 5.1:-21586058 | MS.gene068612:CDS |
| AAATACAGGCACGAACTTAC+GGG | 0.426387 | 5.1:-21585212 | MS.gene068612:intron |
| CGCGATGGCACCATCACCTA+TGG | 0.430946 | 5.1:-21585032 | MS.gene068612:CDS |
| TTCACATTATGCAGAATGAA+TGG | 0.433959 | 5.1:-21585470 | MS.gene068612:CDS |
| CATTCAAGGTGTTGTATTGT+GGG | 0.442854 | 5.1:-21585509 | MS.gene068612:CDS |
| TTAAAGTTGGAGACAAAGTA+GGG | 0.443890 | 5.1:-21585154 | MS.gene068612:CDS |
| TGAGAAAGATGTAGCATTCA+AGG | 0.455978 | 5.1:-21585523 | MS.gene068612:CDS |
| TCACATTATGCAGAATGAAT+GGG | 0.468998 | 5.1:-21585469 | MS.gene068612:CDS |
| ACTAGTAGTGTTTCCTAAGA+AGG | 0.473171 | 5.1:-21586089 | MS.gene068612:CDS |
| GGTATGAATATAGGAGTTGT+TGG | 0.473313 | 5.1:-21584867 | MS.gene068612:CDS |
| CAAAGTAGGGGTGGGATACA+TGG | 0.477101 | 5.1:-21585141 | MS.gene068612:CDS |
| AATATAGGAGTTGTTGGTCT+TGG | 0.479644 | 5.1:-21584861 | MS.gene068612:CDS |
| AAATATACTCAAACATTCAA+TGG | 0.481148 | 5.1:-21585062 | MS.gene068612:CDS |
| AGGCCTTTGGATGGGCAGCT+AGG | 0.486006 | 5.1:-21586069 | MS.gene068612:CDS |
| CCTCCAAGTAAAGAAAATAC+AGG | 0.487127 | 5.1:+21584467 | None:intergenic |
| GATTTCAATAAACCAATCAA+TGG | 0.487235 | 5.1:+21584539 | None:intergenic |
| CAATGTAACTCCTGAGATTG+AGG | 0.489775 | 5.1:-21584265 | MS.gene068612:CDS |
| TGGAGGTTTCTCCGACTCAA+TGG | 0.497539 | 5.1:-21585012 | MS.gene068612:CDS |
| TCCTAAGAAGGCCTTTGGAT+GGG | 0.497721 | 5.1:-21586077 | MS.gene068612:CDS |
| GGCCTTTGGATGGGCAGCTA+GGG | 0.497825 | 5.1:-21586068 | MS.gene068612:CDS |
| GTAGGGAGAAAGTCAATAGC+TGG | 0.498727 | 5.1:-21584345 | MS.gene068612:intron |
| AACCACCTATCCATTAGTCC+CGG | 0.500566 | 5.1:-21585442 | MS.gene068612:CDS |
| GACAAGCCTGGTATGAATAT+AGG | 0.503872 | 5.1:-21584876 | MS.gene068612:CDS |
| ATAGGAACAACCTCAATCTC+AGG | 0.503943 | 5.1:+21584255 | None:intergenic |
| AACCTTCTAAAGAAATGGAA+AGG | 0.507463 | 5.1:+21586025 | None:intergenic |
| GCAATGGAGCGTCTTGCTAA+AGG | 0.517863 | 5.1:-21584216 | MS.gene068612:CDS |
| AGCTTACCTCTTGATGGTGC+CGG | 0.518846 | 5.1:-21584954 | MS.gene068612:CDS |
| GCATTCAAGGTGTTGTATTG+TGG | 0.522756 | 5.1:-21585510 | MS.gene068612:CDS |
| ACCTTCTAAAGAAATGGAAA+GGG | 0.523495 | 5.1:+21586026 | None:intergenic |
| ACCACCTATCCATTAGTCCC+GGG | 0.540962 | 5.1:-21585441 | MS.gene068612:CDS |
| GAAAATACAGGAAGCTCTAG+AGG | 0.546279 | 5.1:+21584479 | None:intergenic |
| TTCCTAAGAAGGCCTTTGGA+TGG | 0.547584 | 5.1:-21586078 | MS.gene068612:CDS |
| CTCGTTTGCAACCATTGAGT+CGG | 0.553257 | 5.1:+21585001 | None:intergenic |
| AGTTGGAGACAAAGTAGGGG+TGG | 0.553693 | 5.1:-21585150 | MS.gene068612:CDS |
| TCCAGCGCAAAGAAGAGGAC+CGG | 0.554636 | 5.1:+21584935 | None:intergenic |
| GTGACTCCAGCGCAAAGAAG+AGG | 0.566494 | 5.1:+21584930 | None:intergenic |
| TAGCTGGAAGTTTAATTGGA+GGG | 0.567406 | 5.1:-21584329 | MS.gene068612:CDS |
| GTCCCTAGCTGCCCATCCAA+AGG | 0.583346 | 5.1:+21586066 | None:intergenic |
| GCTGCAACGAGTACTTTGAA+TGG | 0.585867 | 5.1:-21584599 | MS.gene068612:CDS |
| ATCTAATGGAAAGCTTGTAA+TGG | 0.587781 | 5.1:-21584519 | MS.gene068612:CDS |
| CGATTATGTCAACACAGCAA+TGG | 0.588395 | 5.1:-21584232 | MS.gene068612:CDS |
| ATAGCTGGAAGTTTAATTGG+AGG | 0.588996 | 5.1:-21584330 | MS.gene068612:CDS |
| AAGGAAGCAATAGAACACTT+AGG | 0.595080 | 5.1:-21584756 | MS.gene068612:CDS |
| CCGCGATCCAGATCAGATGC+AGG | 0.596450 | 5.1:-21584712 | MS.gene068612:intron |
| CACATTATGCAGAATGAATG+GGG | 0.597941 | 5.1:-21585468 | MS.gene068612:CDS |
| GGAGAAACCTCCATAGGTGA+TGG | 0.604248 | 5.1:+21585022 | None:intergenic |
| GTTGGAGACAAAGTAGGGGT+GGG | 0.608564 | 5.1:-21585149 | MS.gene068612:CDS |
| TTCAATGGTAAGTATCGCGA+TGG | 0.612763 | 5.1:-21585047 | MS.gene068612:CDS |
| ATACCCCGGGACTAATGGAT+AGG | 0.615005 | 5.1:+21585437 | None:intergenic |
| AATGGAAAGCTTGTAATGGT+TGG | 0.618001 | 5.1:-21584515 | MS.gene068612:CDS |
| CCCCGGGACTAATGGATAGG+TGG | 0.620100 | 5.1:+21585440 | None:intergenic |
| ATTCATTCTGCATAATGTGA+AGG | 0.626134 | 5.1:+21585472 | None:intergenic |
| CCTTCTAAAGAAATGGAAAG+GGG | 0.632604 | 5.1:+21586027 | None:intergenic |
| TACGGGTGTAGTAACAGAGG+TGG | 0.634996 | 5.1:-21585195 | MS.gene068612:CDS |
| TCGAGTCCAAAATGTCGAAG+AGG | 0.639224 | 5.1:+21584897 | None:intergenic |
| AGAGGACCGGCACCATCAAG+AGG | 0.643577 | 5.1:+21584948 | None:intergenic |
| TGAGTCGGAGAAACCTCCAT+AGG | 0.648832 | 5.1:+21585016 | None:intergenic |
| ACGGGTGTAGTAACAGAGGT+GGG | 0.650453 | 5.1:-21585194 | MS.gene068612:CDS |
| GCTGTGTTGACATAATCGAT+AGG | 0.651012 | 5.1:+21584237 | None:intergenic |
| TAAAGTTGGAGACAAAGTAG+GGG | 0.656574 | 5.1:-21585153 | MS.gene068612:CDS |
| ACAACTCCTATATTCATACC+AGG | 0.664201 | 5.1:+21584870 | None:intergenic |
| GATGGCACCATCACCTATGG+AGG | 0.673821 | 5.1:-21585029 | MS.gene068612:CDS |
| CCACCTATCCATTAGTCCCG+GGG | 0.685161 | 5.1:-21585440 | MS.gene068612:intron |
| CCTGCATCTGATCTGGATCG+CGG | 0.694160 | 5.1:+21584712 | None:intergenic |
| ACTTACGGGTGTAGTAACAG+AGG | 0.741818 | 5.1:-21585198 | MS.gene068612:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATTGATAAAGTAA+AGG | + | chr5.1:21584950-21584969 | None:intergenic | 10.0% |
| !! | ACATTTCATTTGATTAATTT+CGG | - | chr5.1:21585579-21585598 | MS.gene068612:intron | 15.0% |
| !! | CAACTATTAAAAAACTATTA+AGG | - | chr5.1:21584625-21584644 | MS.gene068612:intron | 15.0% |
| !! | TAAACTATAATAGAAGTTAA+AGG | + | chr5.1:21584866-21584885 | None:intergenic | 15.0% |
| !! | TTAAAAAACTATTAAGGAAT+TGG | - | chr5.1:21584631-21584650 | MS.gene068612:intron | 15.0% |
| !!! | AAAGTAAAAAAGTTTAAAGT+TGG | - | chr5.1:21585100-21585119 | MS.gene068612:CDS | 15.0% |
| !!! | AATATTGTGTAAGTTTTATT+TGG | - | chr5.1:21584405-21584424 | MS.gene068612:intron | 15.0% |
| !! | AAAATATTTCGCAAAGTAAA+TGG | - | chr5.1:21584567-21584586 | MS.gene068612:CDS | 20.0% |
| !! | AAATATACTCAAACATTCAA+TGG | - | chr5.1:21585205-21585224 | MS.gene068612:CDS | 20.0% |
| !! | AATATTGTACAACATTTCAT+AGG | - | chr5.1:21585646-21585665 | MS.gene068612:intron | 20.0% |
| !! | AATGTATTAAATTAGTGAAG+AGG | + | chr5.1:21584282-21584301 | None:intergenic | 20.0% |
| !! | ATAACTGATGTAATAAATAC+AGG | - | chr5.1:21585041-21585060 | MS.gene068612:CDS | 20.0% |
| !! | TAGAAAATAATTGCTCAATT+TGG | - | chr5.1:21585016-21585035 | MS.gene068612:CDS | 20.0% |
| !! | TGAATGTTTGAGTATATTTA+GGG | + | chr5.1:21585204-21585223 | None:intergenic | 20.0% |
| !! | TTGAATGTTTGAGTATATTT+AGG | + | chr5.1:21585205-21585224 | None:intergenic | 20.0% |
| !! | TTGTATTAATTTCGCATTAT+TGG | - | chr5.1:21585900-21585919 | MS.gene068612:intron | 20.0% |
| !!! | ACCTTTCTTTGAAATTAAAA+GGG | + | chr5.1:21584343-21584362 | None:intergenic | 20.0% |
| !!! | ATTGGTTTATTGAAATCTAA+TGG | - | chr5.1:21585734-21585753 | MS.gene068612:intron | 20.0% |
| !!! | TACCTTTCTTTGAAATTAAA+AGG | + | chr5.1:21584344-21584363 | None:intergenic | 20.0% |
| ! | ATTAATTTCGCATTATTGGT+AGG | - | chr5.1:21585904-21585923 | MS.gene068612:intron | 25.0% |
| ! | GATTTCAATAAACCAATCAA+TGG | + | chr5.1:21585731-21585750 | None:intergenic | 25.0% |
| ! | TGACAATTAAAAAGAAACGA+CGG | + | chr5.1:21584891-21584910 | None:intergenic | 25.0% |
| ! | TTAATTTCGCATTATTGGTA+GGG | - | chr5.1:21585905-21585924 | MS.gene068612:intron | 25.0% |
| !!! | TCCCTTTTAATTTCAAAGAA+AGG | - | chr5.1:21584339-21584358 | MS.gene068612:CDS | 25.0% |
| AAACCAATCAATGGTAAAAC+AGG | + | chr5.1:21585722-21585741 | None:intergenic | 30.0% | |
| AAGTTTAATTGGAGGGATAA+AGG | - | chr5.1:21585945-21585964 | MS.gene068612:intron | 30.0% | |
| AATTAGTACATCGCCTAAAA+AGG | - | chr5.1:21585486-21585505 | MS.gene068612:CDS | 30.0% | |
| ATCTAATGGAAAGCTTGTAA+TGG | - | chr5.1:21585748-21585767 | MS.gene068612:intron | 30.0% | |
| ATTCATTCTGCATAATGTGA+AGG | + | chr5.1:21584798-21584817 | None:intergenic | 30.0% | |
| GATGTTTACATCAATGTTCT+TGG | - | chr5.1:21584682-21584701 | MS.gene068612:intron | 30.0% | |
| TATGATGCATCAAAACTTCA+GGG | - | chr5.1:21584714-21584733 | MS.gene068612:CDS | 30.0% | |
| TCAATAGCTGGAAGTTTAAT+TGG | - | chr5.1:21585934-21585953 | MS.gene068612:intron | 30.0% | |
| TCACATTATGCAGAATGAAT+GGG | - | chr5.1:21584798-21584817 | MS.gene068612:CDS | 30.0% | |
| TTAAAGTTGGAGACAAAGTA+GGG | - | chr5.1:21585113-21585132 | MS.gene068612:CDS | 30.0% | |
| TTATGATGCATCAAAACTTC+AGG | - | chr5.1:21584713-21584732 | MS.gene068612:CDS | 30.0% | |
| TTCACATTATGCAGAATGAA+TGG | - | chr5.1:21584797-21584816 | MS.gene068612:CDS | 30.0% | |
| TTTAGGCGATGTACTAATTA+CGG | + | chr5.1:21585485-21585504 | None:intergenic | 30.0% | |
| ! | AACCTTCTAAAGAAATGGAA+AGG | + | chr5.1:21584245-21584264 | None:intergenic | 30.0% |
| ! | AAGTGAACCTTCTAAAGAAA+TGG | + | chr5.1:21584250-21584269 | None:intergenic | 30.0% |
| ! | ACCTTCTAAAGAAATGGAAA+GGG | + | chr5.1:21584244-21584263 | None:intergenic | 30.0% |
| ! | ATTGCTTCCTTTTCCTTTTT+AGG | + | chr5.1:21585502-21585521 | None:intergenic | 30.0% |
| ! | CTTCCTGTATTTTCTTTACT+TGG | - | chr5.1:21585797-21585816 | MS.gene068612:intron | 30.0% |
| ! | TTTAAAGTTGGAGACAAAGT+AGG | - | chr5.1:21585112-21585131 | MS.gene068612:CDS | 30.0% |
| !! | GCAGTAATTTTCAAGATCTT+CGG | + | chr5.1:21585182-21585201 | None:intergenic | 30.0% |
| !! | TATCGATTCGTGATTGATAT+TGG | - | chr5.1:21586084-21586103 | MS.gene068612:CDS | 30.0% |
| !!! | ATGCTTTTAAAGTACGTCTT+AGG | - | chr5.1:21584488-21584507 | MS.gene068612:CDS | 30.0% |
| !!! | GTGAAATTTGCTAAAGCTTT+TGG | - | chr5.1:21585448-21585467 | MS.gene068612:CDS | 30.0% |
| AAGGAAGCAATAGAACACTT+AGG | - | chr5.1:21585511-21585530 | MS.gene068612:CDS | 35.0% | |
| AATGGAAAGCTTGTAATGGT+TGG | - | chr5.1:21585752-21585771 | MS.gene068612:intron | 35.0% | |
| ACAACTCCTATATTCATACC+AGG | + | chr5.1:21585400-21585419 | None:intergenic | 35.0% | |
| ACTAGTAGTGTTTCCTAAGA+AGG | - | chr5.1:21584178-21584197 | MS.gene068612:CDS | 35.0% | |
| ATAGCTGGAAGTTTAATTGG+AGG | - | chr5.1:21585937-21585956 | MS.gene068612:intron | 35.0% | |
| CACATTATGCAGAATGAATG+GGG | - | chr5.1:21584799-21584818 | MS.gene068612:CDS | 35.0% | |
| CCTCCAAGTAAAGAAAATAC+AGG | + | chr5.1:21585803-21585822 | None:intergenic | 35.0% | |
| GGTATGAATATAGGAGTTGT+TGG | - | chr5.1:21585400-21585419 | MS.gene068612:intron | 35.0% | |
| TAAAGTTGGAGACAAAGTAG+GGG | - | chr5.1:21585114-21585133 | MS.gene068612:CDS | 35.0% | |
| TAAATACAGGCACGAACTTA+CGG | - | chr5.1:21585054-21585073 | MS.gene068612:CDS | 35.0% | |
| TACATCGCCTAAAAAGGAAA+AGG | - | chr5.1:21585492-21585511 | MS.gene068612:CDS | 35.0% | |
| TAGCTGGAAGTTTAATTGGA+GGG | - | chr5.1:21585938-21585957 | MS.gene068612:intron | 35.0% | |
| TGAGAAAGATGTAGCATTCA+AGG | - | chr5.1:21584744-21584763 | MS.gene068612:CDS | 35.0% | |
| ! | AATATAGGAGTTGTTGGTCT+TGG | - | chr5.1:21585406-21585425 | MS.gene068612:intron | 35.0% |
| ! | CATCCTGTTTTACCATTGAT+TGG | - | chr5.1:21585716-21585735 | MS.gene068612:intron | 35.0% |
| ! | CCTGTATTTTCTTTACTTGG+AGG | - | chr5.1:21585800-21585819 | MS.gene068612:intron | 35.0% |
| ! | CCTTCTAAAGAAATGGAAAG+GGG | + | chr5.1:21584243-21584262 | None:intergenic | 35.0% |
| ! | TATAGTCCTCTTCGACATTT+TGG | - | chr5.1:21585364-21585383 | MS.gene068612:intron | 35.0% |
| !! | CATTCAAGGTGTTGTATTGT+GGG | - | chr5.1:21584758-21584777 | MS.gene068612:CDS | 35.0% |
| AAATACAGGCACGAACTTAC+GGG | - | chr5.1:21585055-21585074 | MS.gene068612:CDS | 40.0% | |
| AAATGTACCTGCATCTGATC+TGG | + | chr5.1:21585565-21585584 | None:intergenic | 40.0% | |
| ATAGGAACAACCTCAATCTC+AGG | + | chr5.1:21586015-21586034 | None:intergenic | 40.0% | |
| CAATGTAACTCCTGAGATTG+AGG | - | chr5.1:21586002-21586021 | MS.gene068612:intron | 40.0% | |
| CATCAAAACTTCAGGGAAAC+AGG | - | chr5.1:21584721-21584740 | MS.gene068612:CDS | 40.0% | |
| CCCCTTTCCATTTCTTTAGA+AGG | - | chr5.1:21584240-21584259 | MS.gene068612:CDS | 40.0% | |
| CGATTATGTCAACACAGCAA+TGG | - | chr5.1:21586035-21586054 | MS.gene068612:CDS | 40.0% | |
| GACAAGCCTGGTATGAATAT+AGG | - | chr5.1:21585391-21585410 | MS.gene068612:intron | 40.0% | |
| ! | GAAAATACAGGAAGCTCTAG+AGG | + | chr5.1:21585791-21585810 | None:intergenic | 40.0% |
| ! | GCTGTGTTGACATAATCGAT+AGG | + | chr5.1:21586033-21586052 | None:intergenic | 40.0% |
| ! | TTCAATGGTAAGTATCGCGA+TGG | - | chr5.1:21585220-21585239 | MS.gene068612:intron | 40.0% |
| !! | AAGGTGTTGAAAACATACCC+CGG | + | chr5.1:21584847-21584866 | None:intergenic | 40.0% |
| !! | GCATTCAAGGTGTTGTATTG+TGG | - | chr5.1:21584757-21584776 | MS.gene068612:CDS | 40.0% |
| AAAACATACCCCGGGACTAA+TGG | + | chr5.1:21584838-21584857 | None:intergenic | 45.0% | |
| AACCACCTATCCATTAGTCC+CGG | - | chr5.1:21584825-21584844 | MS.gene068612:CDS | 45.0% | |
| ACTTACGGGTGTAGTAACAG+AGG | - | chr5.1:21585069-21585088 | MS.gene068612:CDS | 45.0% | |
| CCATCAAGAGGTAAGCTATC+AGG | + | chr5.1:21585310-21585329 | None:intergenic | 45.0% | |
| CCTGATAGCTTACCTCTTGA+TGG | - | chr5.1:21585307-21585326 | MS.gene068612:intron | 45.0% | |
| CTCGTTTGCAACCATTGAGT+CGG | + | chr5.1:21585269-21585288 | None:intergenic | 45.0% | |
| GCTGCAACGAGTACTTTGAA+TGG | - | chr5.1:21585668-21585687 | MS.gene068612:intron | 45.0% | |
| GTAGGGAGAAAGTCAATAGC+TGG | - | chr5.1:21585922-21585941 | MS.gene068612:intron | 45.0% | |
| GTGTTTCCTAAGAAGGCCTT+TGG | - | chr5.1:21584185-21584204 | MS.gene068612:CDS | 45.0% | |
| TCCTAAGAAGGCCTTTGGAT+GGG | - | chr5.1:21584190-21584209 | MS.gene068612:CDS | 45.0% | |
| TCGAGTCCAAAATGTCGAAG+AGG | + | chr5.1:21585373-21585392 | None:intergenic | 45.0% | |
| TTCCTAAGAAGGCCTTTGGA+TGG | - | chr5.1:21584189-21584208 | MS.gene068612:CDS | 45.0% | |
| !! | AGGTGTTGAAAACATACCCC+GGG | + | chr5.1:21584846-21584865 | None:intergenic | 45.0% |
| !! | ATAGGAGTTGTTGGTCTTGG+TGG | - | chr5.1:21585409-21585428 | MS.gene068612:intron | 45.0% |
| !! | TCTTGGTGGACTTGGTCATA+TGG | - | chr5.1:21585423-21585442 | MS.gene068612:intron | 45.0% |
| ACCACCTATCCATTAGTCCC+GGG | - | chr5.1:21584826-21584845 | MS.gene068612:CDS | 50.0% | |
| ACGGGTGTAGTAACAGAGGT+GGG | - | chr5.1:21585073-21585092 | MS.gene068612:CDS | 50.0% | |
| AGTTGGAGACAAAGTAGGGG+TGG | - | chr5.1:21585117-21585136 | MS.gene068612:CDS | 50.0% | |
| CAAAGTAGGGGTGGGATACA+TGG | - | chr5.1:21585126-21585145 | MS.gene068612:CDS | 50.0% | |
| GGAGAAACCTCCATAGGTGA+TGG | + | chr5.1:21585248-21585267 | None:intergenic | 50.0% | |
| GTTGGAGACAAAGTAGGGGT+GGG | - | chr5.1:21585118-21585137 | MS.gene068612:CDS | 50.0% | |
| TACGGGTGTAGTAACAGAGG+TGG | - | chr5.1:21585072-21585091 | MS.gene068612:CDS | 50.0% | |
| TGAGTCGGAGAAACCTCCAT+AGG | + | chr5.1:21585254-21585273 | None:intergenic | 50.0% | |
| TGGAGGTTTCTCCGACTCAA+TGG | - | chr5.1:21585255-21585274 | MS.gene068612:intron | 50.0% | |
| ! | ATACCCCGGGACTAATGGAT+AGG | + | chr5.1:21584833-21584852 | None:intergenic | 50.0% |
| ! | CATTTTGGACTCGACAAGCC+TGG | - | chr5.1:21585379-21585398 | MS.gene068612:intron | 50.0% |
| ! | GCAATGGAGCGTCTTGCTAA+AGG | - | chr5.1:21586051-21586070 | MS.gene068612:CDS | 50.0% |
| !! | AGCTTACCTCTTGATGGTGC+CGG | - | chr5.1:21585313-21585332 | MS.gene068612:intron | 50.0% |
| !! | GTTGTTGGTCTTGGTGGACT+TGG | - | chr5.1:21585415-21585434 | MS.gene068612:intron | 50.0% |
| CCACCTATCCATTAGTCCCG+GGG | - | chr5.1:21584827-21584846 | MS.gene068612:CDS | 55.0% | |
| CCTGCATCTGATCTGGATCG+CGG | + | chr5.1:21585558-21585577 | None:intergenic | 55.0% | |
| GATGGCACCATCACCTATGG+AGG | - | chr5.1:21585238-21585257 | MS.gene068612:intron | 55.0% | |
| GCCCATCCAAAGGCCTTCTT+AGG | + | chr5.1:21584194-21584213 | None:intergenic | 55.0% | |
| GTGACTCCAGCGCAAAGAAG+AGG | + | chr5.1:21585340-21585359 | None:intergenic | 55.0% | |
| TCCAGCGCAAAGAAGAGGAC+CGG | + | chr5.1:21585335-21585354 | None:intergenic | 55.0% | |
| AGAGGACCGGCACCATCAAG+AGG | + | chr5.1:21585322-21585341 | None:intergenic | 60.0% | |
| AGGCCTTTGGATGGGCAGCT+AGG | - | chr5.1:21584198-21584217 | MS.gene068612:CDS | 60.0% | |
| CCGCGATCCAGATCAGATGC+AGG | - | chr5.1:21585555-21585574 | MS.gene068612:intron | 60.0% | |
| CGCGATGGCACCATCACCTA+TGG | - | chr5.1:21585235-21585254 | MS.gene068612:intron | 60.0% | |
| GGCCTTTGGATGGGCAGCTA+GGG | - | chr5.1:21584199-21584218 | MS.gene068612:CDS | 60.0% | |
| GTCCCTAGCTGCCCATCCAA+AGG | + | chr5.1:21584204-21584223 | None:intergenic | 60.0% | |
| TGGGCAGCTAGGGACTCTTC+TGG | - | chr5.1:21584209-21584228 | MS.gene068612:CDS | 60.0% | |
| ! | CCCCGGGACTAATGGATAGG+TGG | + | chr5.1:21584830-21584849 | None:intergenic | 60.0% |
| GCCGGTCCTCTTCTTTGCGC+TGG | - | chr5.1:21585331-21585350 | MS.gene068612:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 21584158 | 21586131 | 21584158 | ID=MS.gene068612 |
| chr5.1 | mRNA | 21584158 | 21586131 | 21584158 | ID=MS.gene068612.t1;Parent=MS.gene068612 |
| chr5.1 | exon | 21586028 | 21586131 | 21586028 | ID=MS.gene068612.t1.exon1;Parent=MS.gene068612.t1 |
| chr5.1 | CDS | 21586028 | 21586131 | 21586028 | ID=cds.MS.gene068612.t1;Parent=MS.gene068612.t1 |
| chr5.1 | exon | 21585441 | 21585554 | 21585441 | ID=MS.gene068612.t1.exon2;Parent=MS.gene068612.t1 |
| chr5.1 | CDS | 21585441 | 21585554 | 21585441 | ID=cds.MS.gene068612.t1;Parent=MS.gene068612.t1 |
| chr5.1 | exon | 21584713 | 21585226 | 21584713 | ID=MS.gene068612.t1.exon3;Parent=MS.gene068612.t1 |
| chr5.1 | CDS | 21584713 | 21585226 | 21584713 | ID=cds.MS.gene068612.t1;Parent=MS.gene068612.t1 |
| chr5.1 | exon | 21584468 | 21584621 | 21584468 | ID=MS.gene068612.t1.exon4;Parent=MS.gene068612.t1 |
| chr5.1 | CDS | 21584468 | 21584621 | 21584468 | ID=cds.MS.gene068612.t1;Parent=MS.gene068612.t1 |
| chr5.1 | exon | 21584158 | 21584363 | 21584158 | ID=MS.gene068612.t1.exon5;Parent=MS.gene068612.t1 |
| chr5.1 | CDS | 21584158 | 21584363 | 21584158 | ID=cds.MS.gene068612.t1;Parent=MS.gene068612.t1 |
| Gene Sequence |
| Protein sequence |
