Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41651.t1 | XP_013461655.2 | 97.8 | 460 | 10 | 0 | 1 | 460 | 5 | 464 | 9.80E-265 | 922.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41651.t1 | Q93Y09 | 77.0 | 439 | 97 | 3 | 22 | 460 | 27 | 461 | 3.7e-204 | 712.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41651.t1 | A0A396J055 | 97.8 | 460 | 10 | 0 | 1 | 460 | 5 | 464 | 7.0e-265 | 922.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene41651 | 0.826018 | 3.41E-54 | -1.69E-46 |
| MS.gene049190 | MS.gene41651 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene049227 | MS.gene41651 | 0.818558 | 1.84E-52 | -1.69E-46 |
| MS.gene049328 | MS.gene41651 | 0.819292 | 1.25E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene41651 | 0.841212 | 5.45E-58 | -1.69E-46 |
| MS.gene049418 | MS.gene41651 | 0.848137 | 7.42E-60 | -1.69E-46 |
| MS.gene049441 | MS.gene41651 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene41651 | 0.861073 | 1.32E-63 | -1.69E-46 |
| MS.gene049807 | MS.gene41651 | 0.85301 | 3.17E-61 | -1.69E-46 |
| MS.gene049824 | MS.gene41651 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene41651 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene049887 | MS.gene41651 | 0.8299 | 3.97E-55 | -1.69E-46 |
| MS.gene050310 | MS.gene41651 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene41651 | 0.834222 | 3.40E-56 | -1.69E-46 |
| MS.gene051018 | MS.gene41651 | 0.87236 | 3.38E-67 | -1.69E-46 |
| MS.gene051021 | MS.gene41651 | 0.851594 | 8.02E-61 | -1.69E-46 |
| MS.gene051247 | MS.gene41651 | 0.804106 | 2.53E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene41651 | 0.812427 | 4.26E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene41651 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene051450 | MS.gene41651 | 0.811166 | 8.02E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene41651 | 0.814654 | 1.38E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene41651 | 0.821226 | 4.52E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene41651 | 0.839895 | 1.21E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene41651 | 0.842459 | 2.55E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene41651 | 0.833315 | 5.72E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene41651 | 0.859343 | 4.42E-63 | -1.69E-46 |
| MS.gene051720 | MS.gene41651 | 0.880029 | 7.68E-70 | -1.69E-46 |
| MS.gene051744 | MS.gene41651 | 0.833094 | 6.50E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene41651 | 0.823165 | 1.60E-53 | -1.69E-46 |
| MS.gene052000 | MS.gene41651 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene41651 | 0.81949 | 1.13E-52 | -1.69E-46 |
| MS.gene052151 | MS.gene41651 | 0.800294 | 1.54E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene41651 | 0.82601 | 3.43E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene41651 | 0.877081 | 8.36E-69 | -1.69E-46 |
| MS.gene053122 | MS.gene41651 | 0.831205 | 1.90E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene41651 | 0.81654 | 5.25E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene41651 | 0.915657 | 4.54E-85 | -1.69E-46 |
| MS.gene053171 | MS.gene41651 | 0.852219 | 5.33E-61 | -1.69E-46 |
| MS.gene053174 | MS.gene41651 | 0.839765 | 1.30E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene41651 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene41651 | 0.875258 | 3.55E-68 | -1.69E-46 |
| MS.gene053538 | MS.gene41651 | 0.869821 | 2.32E-66 | -1.69E-46 |
| MS.gene053540 | MS.gene41651 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene41651 | 0.851192 | 1.04E-60 | -1.69E-46 |
| MS.gene053599 | MS.gene41651 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene41651 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene054550 | MS.gene41651 | 0.836311 | 1.01E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene41651 | 0.830738 | 2.48E-55 | -1.69E-46 |
| MS.gene054584 | MS.gene41651 | 0.915756 | 4.03E-85 | -1.69E-46 |
| MS.gene054824 | MS.gene41651 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene41651 | 0.819215 | 1.31E-52 | -1.69E-46 |
| MS.gene055144 | MS.gene41651 | 0.81919 | 1.32E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene41651 | 0.880645 | 4.63E-70 | -1.69E-46 |
| MS.gene055466 | MS.gene41651 | 0.864361 | 1.28E-64 | -1.69E-46 |
| MS.gene055467 | MS.gene41651 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene41651 | 0.867965 | 9.27E-66 | -1.69E-46 |
| MS.gene055469 | MS.gene41651 | 0.869512 | 2.93E-66 | -1.69E-46 |
| MS.gene055513 | MS.gene41651 | 0.827491 | 1.52E-54 | -1.69E-46 |
| MS.gene055537 | MS.gene41651 | 0.970935 | 2.23E-132 | -1.69E-46 |
| MS.gene055580 | MS.gene41651 | -0.889084 | 3.32E-73 | -1.69E-46 |
| MS.gene055764 | MS.gene41651 | 0.870643 | 1.25E-66 | -1.69E-46 |
| MS.gene055890 | MS.gene41651 | 0.830941 | 2.21E-55 | -1.69E-46 |
| MS.gene055891 | MS.gene41651 | 0.845316 | 4.38E-59 | -1.69E-46 |
| MS.gene055975 | MS.gene41651 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene056005 | MS.gene41651 | 0.830233 | 3.30E-55 | -1.69E-46 |
| MS.gene056043 | MS.gene41651 | -0.870454 | 1.44E-66 | -1.69E-46 |
| MS.gene056169 | MS.gene41651 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene056228 | MS.gene41651 | 0.812329 | 4.48E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene41651 | 0.854149 | 1.49E-61 | -1.69E-46 |
| MS.gene056396 | MS.gene41651 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene056507 | MS.gene41651 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene057004 | MS.gene41651 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene41651 | 0.833927 | 4.03E-56 | -1.69E-46 |
| MS.gene057294 | MS.gene41651 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene058087 | MS.gene41651 | 0.829996 | 3.77E-55 | -1.69E-46 |
| MS.gene058339 | MS.gene41651 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene41651 | 0.851065 | 1.13E-60 | -1.69E-46 |
| MS.gene058649 | MS.gene41651 | 0.815481 | 9.04E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene41651 | 0.878111 | 3.66E-69 | -1.69E-46 |
| MS.gene058852 | MS.gene41651 | 0.836578 | 8.62E-57 | -1.69E-46 |
| MS.gene058945 | MS.gene41651 | 0.807818 | 4.20E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene41651 | 0.866074 | 3.72E-65 | -1.69E-46 |
| MS.gene059015 | MS.gene41651 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene059154 | MS.gene41651 | 0.803626 | 3.19E-49 | -1.69E-46 |
| MS.gene059300 | MS.gene41651 | 0.803481 | 3.41E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene41651 | 0.875568 | 2.78E-68 | -1.69E-46 |
| MS.gene059426 | MS.gene41651 | 0.817385 | 3.39E-52 | -1.69E-46 |
| MS.gene059570 | MS.gene41651 | 0.81512 | 1.09E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene41651 | 0.822281 | 2.58E-53 | -1.69E-46 |
| MS.gene059778 | MS.gene41651 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene060519 | MS.gene41651 | 0.850608 | 1.52E-60 | -1.69E-46 |
| MS.gene06057 | MS.gene41651 | 0.812123 | 4.97E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene41651 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene41651 | 0.827885 | 1.22E-54 | -1.69E-46 |
| MS.gene060884 | MS.gene41651 | 0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene41651 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene061100 | MS.gene41651 | 0.821468 | 3.97E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41651.t1 | MTR_3g498755 | 98.438 | 448 | 7 | 0 | 13 | 460 | 1 | 448 | 0.0 | 918 |
| MS.gene41651.t1 | MTR_8g099930 | 79.565 | 460 | 89 | 4 | 1 | 460 | 11 | 465 | 0.0 | 757 |
| MS.gene41651.t1 | MTR_7g021130 | 72.973 | 444 | 116 | 3 | 17 | 460 | 21 | 460 | 0.0 | 688 |
| MS.gene41651.t1 | MTR_3g434850 | 60.860 | 442 | 166 | 4 | 19 | 460 | 23 | 457 | 0.0 | 589 |
| MS.gene41651.t1 | MTR_2g449850 | 58.716 | 436 | 169 | 6 | 24 | 457 | 36 | 462 | 0.0 | 535 |
| MS.gene41651.t1 | MTR_1g040370 | 52.667 | 450 | 167 | 5 | 9 | 458 | 13 | 416 | 4.05e-169 | 482 |
| MS.gene41651.t1 | MTR_1g102130 | 48.519 | 439 | 188 | 9 | 22 | 457 | 87 | 490 | 1.21e-143 | 420 |
| MS.gene41651.t1 | MTR_3g090150 | 45.125 | 441 | 229 | 6 | 25 | 459 | 32 | 465 | 8.83e-143 | 417 |
| MS.gene41651.t1 | MTR_3g090130 | 45.434 | 438 | 226 | 6 | 25 | 457 | 27 | 456 | 2.52e-139 | 408 |
| MS.gene41651.t1 | MTR_5g072570 | 45.682 | 440 | 226 | 7 | 25 | 457 | 28 | 461 | 6.63e-138 | 404 |
| MS.gene41651.t1 | MTR_7g013790 | 42.316 | 475 | 242 | 11 | 4 | 460 | 7 | 467 | 5.59e-119 | 356 |
| MS.gene41651.t1 | MTR_3g079590 | 45.622 | 434 | 210 | 12 | 24 | 453 | 75 | 486 | 1.99e-118 | 355 |
| MS.gene41651.t1 | MTR_3g079560 | 43.450 | 458 | 233 | 10 | 4 | 457 | 55 | 490 | 3.01e-116 | 350 |
| MS.gene41651.t1 | MTR_3g034290 | 42.466 | 438 | 227 | 11 | 25 | 457 | 73 | 490 | 1.38e-115 | 348 |
| MS.gene41651.t1 | MTR_3g079570 | 44.009 | 434 | 216 | 11 | 24 | 453 | 76 | 486 | 1.49e-114 | 346 |
| MS.gene41651.t1 | MTR_1g095560 | 39.093 | 463 | 259 | 11 | 4 | 457 | 8 | 456 | 3.64e-114 | 343 |
| MS.gene41651.t1 | MTR_0003s0560 | 41.876 | 437 | 229 | 10 | 25 | 457 | 72 | 487 | 2.62e-113 | 342 |
| MS.gene41651.t1 | MTR_3g079600 | 42.299 | 435 | 228 | 11 | 23 | 453 | 72 | 487 | 6.55e-111 | 337 |
| MS.gene41651.t1 | MTR_3g079620 | 41.611 | 447 | 225 | 12 | 24 | 457 | 75 | 498 | 2.26e-110 | 335 |
| MS.gene41651.t1 | MTR_3g079630 | 42.247 | 445 | 217 | 13 | 24 | 453 | 75 | 494 | 1.05e-108 | 331 |
| MS.gene41651.t1 | MTR_1g095560 | 36.566 | 495 | 259 | 12 | 4 | 457 | 8 | 488 | 2.51e-107 | 327 |
| MS.gene41651.t1 | MTR_2g012860 | 39.955 | 448 | 246 | 11 | 24 | 459 | 39 | 475 | 2.71e-107 | 327 |
| MS.gene41651.t1 | MTR_2g062990 | 38.280 | 465 | 267 | 10 | 1 | 459 | 14 | 464 | 1.54e-106 | 324 |
| MS.gene41651.t1 | MTR_1g095540 | 39.394 | 462 | 255 | 14 | 6 | 457 | 10 | 456 | 2.22e-106 | 323 |
| MS.gene41651.t1 | MTR_1g021020 | 40.590 | 441 | 231 | 10 | 24 | 459 | 75 | 489 | 2.69e-106 | 324 |
| MS.gene41651.t1 | MTR_4g089155 | 40.000 | 450 | 243 | 11 | 24 | 459 | 51 | 487 | 1.17e-105 | 323 |
| MS.gene41651.t1 | MTR_1g021010 | 41.535 | 443 | 225 | 12 | 24 | 459 | 73 | 488 | 1.92e-105 | 322 |
| MS.gene41651.t1 | MTR_4g075150 | 38.789 | 446 | 247 | 10 | 25 | 458 | 33 | 464 | 5.48e-105 | 320 |
| MS.gene41651.t1 | MTR_2g062980 | 38.925 | 465 | 264 | 11 | 1 | 459 | 14 | 464 | 8.41e-105 | 320 |
| MS.gene41651.t1 | MTR_4g122950 | 40.481 | 457 | 234 | 13 | 24 | 457 | 36 | 477 | 9.62e-105 | 320 |
| MS.gene41651.t1 | MTR_4g075150 | 39.189 | 444 | 246 | 10 | 25 | 458 | 33 | 462 | 2.03e-104 | 319 |
| MS.gene41651.t1 | MTR_1g020090 | 40.455 | 440 | 229 | 11 | 25 | 459 | 88 | 499 | 3.16e-104 | 319 |
| MS.gene41651.t1 | MTR_2g063000 | 39.130 | 437 | 246 | 10 | 30 | 459 | 42 | 465 | 3.00e-103 | 316 |
| MS.gene41651.t1 | MTR_2g012850 | 38.947 | 475 | 258 | 12 | 1 | 459 | 9 | 467 | 1.00e-102 | 314 |
| MS.gene41651.t1 | MTR_4g122960 | 38.462 | 455 | 244 | 12 | 24 | 457 | 36 | 475 | 1.30e-99 | 307 |
| MS.gene41651.t1 | MTR_2g081620 | 37.665 | 454 | 252 | 14 | 15 | 456 | 28 | 462 | 1.78e-96 | 298 |
| MS.gene41651.t1 | MTR_3g034290 | 42.330 | 352 | 182 | 9 | 25 | 371 | 73 | 408 | 3.13e-90 | 280 |
| MS.gene41651.t1 | MTR_0075s0010 | 41.602 | 387 | 153 | 10 | 25 | 405 | 6 | 325 | 6.52e-87 | 269 |
| MS.gene41651.t1 | MTR_2g063000 | 34.404 | 436 | 237 | 10 | 30 | 459 | 42 | 434 | 4.50e-81 | 258 |
| MS.gene41651.t1 | MTR_7g051430 | 32.669 | 502 | 277 | 13 | 1 | 456 | 9 | 495 | 1.14e-72 | 238 |
| MS.gene41651.t1 | MTR_0003s0560 | 45.149 | 268 | 134 | 6 | 25 | 289 | 72 | 329 | 4.69e-72 | 231 |
| MS.gene41651.t1 | MTR_8g011350 | 32.992 | 488 | 246 | 14 | 27 | 456 | 31 | 495 | 1.11e-70 | 232 |
| MS.gene41651.t1 | MTR_7g080180 | 33.197 | 488 | 251 | 18 | 27 | 456 | 28 | 498 | 5.65e-67 | 223 |
| MS.gene41651.t1 | MTR_8g011350 | 32.538 | 461 | 230 | 14 | 27 | 429 | 31 | 468 | 1.92e-61 | 207 |
| MS.gene41651.t1 | MTR_4g021520 | 29.605 | 456 | 280 | 15 | 22 | 456 | 35 | 470 | 1.56e-58 | 199 |
| MS.gene41651.t1 | MTR_4g021490 | 28.446 | 457 | 284 | 15 | 22 | 456 | 35 | 470 | 3.20e-57 | 196 |
| MS.gene41651.t1 | MTR_7g080180 | 32.960 | 446 | 224 | 18 | 27 | 414 | 28 | 456 | 3.17e-55 | 191 |
| MS.gene41651.t1 | MTR_2g018600 | 29.462 | 465 | 286 | 15 | 16 | 456 | 23 | 469 | 1.42e-54 | 189 |
| MS.gene41651.t1 | MTR_4g021500 | 29.556 | 450 | 276 | 15 | 22 | 450 | 35 | 464 | 4.52e-54 | 194 |
| MS.gene41651.t1 | MTR_4g021500 | 29.698 | 431 | 264 | 15 | 37 | 456 | 485 | 887 | 2.06e-50 | 184 |
| MS.gene41651.t1 | MTR_4g021500 | 29.556 | 450 | 276 | 15 | 22 | 450 | 35 | 464 | 5.61e-54 | 194 |
| MS.gene41651.t1 | MTR_4g021500 | 29.279 | 444 | 267 | 15 | 37 | 456 | 485 | 905 | 7.24e-51 | 185 |
| MS.gene41651.t1 | MTR_4g021530 | 27.731 | 476 | 302 | 16 | 2 | 456 | 16 | 470 | 9.27e-54 | 187 |
| MS.gene41651.t1 | MTR_4g021510 | 29.039 | 458 | 280 | 16 | 22 | 456 | 34 | 469 | 1.27e-52 | 184 |
| MS.gene41651.t1 | MTR_4g021535 | 28.118 | 473 | 294 | 16 | 8 | 456 | 16 | 466 | 2.47e-52 | 183 |
| MS.gene41651.t1 | MTR_3g100420 | 28.515 | 505 | 279 | 15 | 4 | 456 | 22 | 496 | 5.83e-51 | 180 |
| MS.gene41651.t1 | MTR_2g018590 | 27.551 | 490 | 283 | 14 | 4 | 456 | 15 | 469 | 6.71e-51 | 179 |
| MS.gene41651.t1 | MTR_7g051430 | 32.614 | 417 | 226 | 13 | 1 | 371 | 7 | 414 | 1.24e-50 | 177 |
| MS.gene41651.t1 | MTR_1g050545 | 28.972 | 428 | 263 | 14 | 39 | 453 | 81 | 480 | 1.20e-49 | 176 |
| MS.gene41651.t1 | MTR_2g018630 | 28.205 | 468 | 281 | 14 | 16 | 456 | 26 | 465 | 2.58e-49 | 175 |
| MS.gene41651.t1 | MTR_1g094155 | 29.647 | 425 | 255 | 14 | 43 | 453 | 92 | 486 | 6.54e-49 | 175 |
| MS.gene41651.t1 | MTR_4g057585 | 29.398 | 432 | 269 | 13 | 32 | 453 | 87 | 492 | 4.26e-48 | 172 |
| MS.gene41651.t1 | MTR_4g057595 | 29.691 | 421 | 260 | 13 | 43 | 453 | 99 | 493 | 5.37e-48 | 172 |
| MS.gene41651.t1 | MTR_4g057600 | 28.976 | 459 | 265 | 18 | 14 | 454 | 77 | 492 | 8.52e-46 | 166 |
| MS.gene41651.t1 | MTR_4g057570 | 30.023 | 443 | 234 | 19 | 44 | 454 | 92 | 490 | 2.33e-45 | 165 |
| MS.gene41651.t1 | MTR_4g021520 | 28.744 | 414 | 254 | 15 | 22 | 414 | 35 | 428 | 2.67e-45 | 163 |
| MS.gene41651.t1 | MTR_2g095750 | 27.617 | 449 | 276 | 16 | 25 | 454 | 80 | 498 | 4.00e-45 | 164 |
| MS.gene41651.t1 | MTR_2g095730 | 27.273 | 429 | 266 | 16 | 43 | 454 | 96 | 495 | 2.61e-42 | 157 |
| MS.gene41651.t1 | MTR_2g009200 | 26.978 | 493 | 269 | 19 | 1 | 456 | 1 | 439 | 2.20e-39 | 147 |
| MS.gene41651.t1 | MTR_3g045770 | 25.670 | 448 | 285 | 14 | 27 | 451 | 27 | 449 | 6.03e-39 | 146 |
| MS.gene41651.t1 | MTR_4g021535 | 27.093 | 454 | 243 | 17 | 24 | 456 | 33 | 419 | 1.36e-38 | 145 |
| MS.gene41651.t1 | MTR_5g097180 | 26.840 | 462 | 286 | 16 | 4 | 451 | 9 | 432 | 1.79e-34 | 134 |
| MS.gene41651.t1 | MTR_7g100560 | 34.940 | 249 | 92 | 7 | 36 | 278 | 67 | 251 | 2.14e-34 | 131 |
| MS.gene41651.t1 | MTR_4g084710 | 26.432 | 454 | 289 | 15 | 12 | 451 | 12 | 434 | 5.94e-33 | 130 |
| MS.gene41651.t1 | MTR_2g095710 | 25.547 | 411 | 259 | 14 | 56 | 454 | 106 | 481 | 3.45e-31 | 125 |
| MS.gene41651.t1 | MTR_2g018630 | 25.936 | 374 | 230 | 12 | 103 | 456 | 14 | 360 | 3.10e-30 | 120 |
| MS.gene41651.t1 | MTR_1g051175 | 52.174 | 92 | 43 | 1 | 33 | 123 | 18 | 109 | 1.53e-25 | 105 |
| MS.gene41651.t1 | MTR_4g056520 | 26.835 | 436 | 275 | 14 | 44 | 452 | 36 | 454 | 1.12e-24 | 106 |
| MS.gene41651.t1 | MTR_2g084530 | 27.273 | 429 | 256 | 16 | 44 | 440 | 36 | 440 | 4.81e-19 | 89.7 |
| MS.gene41651.t1 | MTR_2g039800 | 62.222 | 45 | 17 | 0 | 412 | 456 | 50 | 94 | 1.11e-14 | 70.1 |
| MS.gene41651.t1 | MTR_8g007520 | 42.254 | 71 | 41 | 0 | 342 | 412 | 111 | 181 | 1.48e-13 | 69.3 |
| MS.gene41651.t1 | MTR_7g021040 | 74.359 | 39 | 10 | 0 | 418 | 456 | 19 | 57 | 2.92e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41651.t1 | AT1G28110 | 76.941 | 438 | 97 | 3 | 23 | 460 | 28 | 461 | 0.0 | 717 |
| MS.gene41651.t1 | AT1G28110 | 76.941 | 438 | 97 | 3 | 23 | 460 | 28 | 461 | 0.0 | 717 |
| MS.gene41651.t1 | AT2G33530 | 74.715 | 439 | 109 | 2 | 22 | 460 | 29 | 465 | 0.0 | 712 |
| MS.gene41651.t1 | AT1G43780 | 49.091 | 440 | 214 | 7 | 25 | 458 | 36 | 471 | 4.14e-147 | 428 |
| MS.gene41651.t1 | AT5G42240 | 47.727 | 440 | 217 | 7 | 25 | 457 | 31 | 464 | 2.31e-140 | 411 |
| MS.gene41651.t1 | AT2G12480 | 46.606 | 442 | 221 | 7 | 21 | 457 | 26 | 457 | 4.68e-140 | 410 |
| MS.gene41651.t1 | AT5G42230 | 45.898 | 451 | 234 | 7 | 12 | 457 | 15 | 460 | 1.84e-139 | 409 |
| MS.gene41651.t1 | AT5G42230 | 45.898 | 451 | 234 | 7 | 12 | 457 | 15 | 460 | 1.84e-139 | 409 |
| MS.gene41651.t1 | AT2G12480 | 45.475 | 442 | 202 | 8 | 21 | 457 | 26 | 433 | 2.51e-132 | 389 |
| MS.gene41651.t1 | AT2G12480 | 45.249 | 442 | 201 | 8 | 21 | 457 | 26 | 431 | 1.36e-130 | 385 |
| MS.gene41651.t1 | AT2G12480 | 45.147 | 443 | 201 | 9 | 21 | 457 | 26 | 432 | 8.45e-129 | 380 |
| MS.gene41651.t1 | AT2G24010 | 42.986 | 442 | 230 | 10 | 25 | 460 | 29 | 454 | 5.66e-118 | 353 |
| MS.gene41651.t1 | AT3G02110 | 42.637 | 455 | 230 | 11 | 22 | 459 | 33 | 473 | 2.39e-116 | 350 |
| MS.gene41651.t1 | AT4G30610 | 40.042 | 472 | 254 | 11 | 3 | 460 | 9 | 465 | 2.97e-116 | 349 |
| MS.gene41651.t1 | AT2G35780 | 40.667 | 450 | 240 | 11 | 17 | 457 | 20 | 451 | 4.93e-115 | 345 |
| MS.gene41651.t1 | AT3G07990 | 41.723 | 441 | 234 | 10 | 25 | 457 | 32 | 457 | 1.46e-114 | 345 |
| MS.gene41651.t1 | AT2G24000 | 41.463 | 451 | 234 | 12 | 25 | 460 | 29 | 464 | 2.68e-113 | 342 |
| MS.gene41651.t1 | AT2G24010 | 41.357 | 457 | 231 | 11 | 25 | 460 | 29 | 469 | 2.17e-112 | 339 |
| MS.gene41651.t1 | AT2G05850 | 39.013 | 446 | 240 | 11 | 25 | 459 | 62 | 486 | 4.09e-111 | 337 |
| MS.gene41651.t1 | AT2G35770 | 40.455 | 440 | 238 | 11 | 25 | 457 | 36 | 458 | 8.39e-110 | 332 |
| MS.gene41651.t1 | AT3G17180 | 41.189 | 454 | 235 | 9 | 23 | 457 | 35 | 475 | 1.29e-108 | 330 |
| MS.gene41651.t1 | AT4G30810 | 37.983 | 466 | 257 | 14 | 5 | 456 | 14 | 461 | 3.32e-107 | 326 |
| MS.gene41651.t1 | AT1G61130 | 40.220 | 455 | 238 | 14 | 19 | 457 | 24 | 460 | 6.16e-107 | 325 |
| MS.gene41651.t1 | AT2G24010 | 39.167 | 480 | 230 | 12 | 27 | 460 | 2 | 465 | 1.59e-106 | 324 |
| MS.gene41651.t1 | AT3G63470 | 40.183 | 438 | 241 | 10 | 25 | 459 | 80 | 499 | 4.55e-105 | 322 |
| MS.gene41651.t1 | AT4G15100 | 38.254 | 481 | 259 | 12 | 1 | 456 | 13 | 480 | 5.63e-105 | 321 |
| MS.gene41651.t1 | AT5G08260 | 40.086 | 464 | 245 | 13 | 14 | 457 | 26 | 476 | 5.15e-103 | 316 |
| MS.gene41651.t1 | AT3G52000 | 38.688 | 442 | 242 | 11 | 25 | 459 | 62 | 481 | 3.68e-102 | 313 |
| MS.gene41651.t1 | AT1G11080 | 40.088 | 454 | 238 | 11 | 25 | 457 | 49 | 489 | 8.10e-102 | 313 |
| MS.gene41651.t1 | AT1G11080 | 40.088 | 454 | 238 | 11 | 25 | 457 | 49 | 489 | 9.63e-102 | 313 |
| MS.gene41651.t1 | AT5G23210 | 37.553 | 474 | 247 | 13 | 17 | 457 | 38 | 495 | 2.97e-101 | 311 |
| MS.gene41651.t1 | AT3G52010 | 38.926 | 447 | 248 | 12 | 20 | 459 | 58 | 486 | 3.96e-101 | 311 |
| MS.gene41651.t1 | AT3G17180 | 39.518 | 415 | 219 | 9 | 23 | 418 | 35 | 436 | 1.48e-91 | 285 |
| MS.gene41651.t1 | AT3G52020 | 37.020 | 443 | 247 | 13 | 25 | 457 | 78 | 498 | 5.57e-91 | 285 |
| MS.gene41651.t1 | AT5G23210 | 36.830 | 429 | 223 | 12 | 17 | 412 | 38 | 451 | 2.53e-87 | 275 |
| MS.gene41651.t1 | AT2G24010 | 39.344 | 366 | 190 | 9 | 27 | 371 | 2 | 356 | 3.38e-79 | 250 |
| MS.gene41651.t1 | AT5G23210 | 36.010 | 411 | 219 | 11 | 76 | 457 | 5 | 400 | 1.23e-78 | 250 |
| MS.gene41651.t1 | AT3G25420 | 34.008 | 494 | 258 | 16 | 16 | 456 | 16 | 494 | 3.76e-78 | 252 |
| MS.gene41651.t1 | AT5G23210 | 35.872 | 407 | 217 | 11 | 80 | 457 | 8 | 399 | 1.77e-77 | 247 |
| MS.gene41651.t1 | AT4G12910 | 33.267 | 505 | 266 | 17 | 1 | 453 | 9 | 494 | 9.01e-75 | 243 |
| MS.gene41651.t1 | AT2G22990 | 31.236 | 445 | 263 | 11 | 24 | 456 | 20 | 433 | 6.04e-67 | 221 |
| MS.gene41651.t1 | AT5G23210 | 34.807 | 362 | 193 | 10 | 80 | 412 | 8 | 355 | 1.46e-63 | 210 |
| MS.gene41651.t1 | AT2G23000 | 31.011 | 445 | 266 | 11 | 24 | 456 | 22 | 437 | 1.30e-62 | 209 |
| MS.gene41651.t1 | AT2G23000 | 31.011 | 445 | 266 | 11 | 24 | 456 | 22 | 437 | 1.30e-62 | 209 |
| MS.gene41651.t1 | AT2G22980 | 30.290 | 449 | 267 | 14 | 19 | 456 | 17 | 430 | 4.69e-62 | 208 |
| MS.gene41651.t1 | AT4G12910 | 32.403 | 466 | 244 | 17 | 1 | 414 | 9 | 455 | 1.24e-61 | 207 |
| MS.gene41651.t1 | AT2G22920 | 30.568 | 458 | 266 | 15 | 16 | 456 | 13 | 435 | 2.53e-61 | 206 |
| MS.gene41651.t1 | AT3G10450 | 30.752 | 452 | 254 | 14 | 24 | 456 | 26 | 437 | 2.89e-61 | 206 |
| MS.gene41651.t1 | AT2G22970 | 31.435 | 439 | 256 | 12 | 30 | 456 | 28 | 433 | 6.76e-61 | 205 |
| MS.gene41651.t1 | AT1G73300 | 30.269 | 446 | 271 | 14 | 21 | 456 | 26 | 441 | 9.01e-61 | 205 |
| MS.gene41651.t1 | AT1G73300 | 30.269 | 446 | 271 | 14 | 21 | 456 | 26 | 441 | 9.01e-61 | 205 |
| MS.gene41651.t1 | AT2G22990 | 30.337 | 445 | 258 | 12 | 24 | 456 | 20 | 424 | 1.57e-60 | 204 |
| MS.gene41651.t1 | AT1G73280 | 29.501 | 461 | 281 | 14 | 8 | 456 | 13 | 441 | 2.64e-60 | 204 |
| MS.gene41651.t1 | AT2G22990 | 31.477 | 413 | 241 | 10 | 30 | 430 | 26 | 408 | 1.47e-59 | 201 |
| MS.gene41651.t1 | AT2G23010 | 30.472 | 466 | 278 | 14 | 6 | 456 | 3 | 437 | 1.90e-59 | 201 |
| MS.gene41651.t1 | AT2G22990 | 31.401 | 414 | 242 | 10 | 30 | 431 | 26 | 409 | 2.60e-59 | 201 |
| MS.gene41651.t1 | AT1G73290 | 31.696 | 448 | 260 | 16 | 21 | 456 | 25 | 438 | 4.56e-59 | 200 |
| MS.gene41651.t1 | AT2G23010 | 30.258 | 466 | 279 | 14 | 6 | 456 | 3 | 437 | 1.11e-58 | 199 |
| MS.gene41651.t1 | AT3G12203 | 29.864 | 442 | 258 | 12 | 30 | 456 | 12 | 416 | 1.20e-58 | 198 |
| MS.gene41651.t1 | AT3G12203 | 29.864 | 442 | 258 | 12 | 30 | 456 | 33 | 437 | 2.27e-58 | 198 |
| MS.gene41651.t1 | AT3G10450 | 30.858 | 431 | 239 | 14 | 45 | 456 | 4 | 394 | 2.69e-58 | 197 |
| MS.gene41651.t1 | AT1G33540 | 30.736 | 462 | 268 | 16 | 24 | 456 | 26 | 464 | 4.55e-58 | 198 |
| MS.gene41651.t1 | AT5G36180 | 29.638 | 442 | 272 | 13 | 24 | 456 | 30 | 441 | 6.69e-58 | 197 |
| MS.gene41651.t1 | AT3G12230 | 31.140 | 456 | 252 | 18 | 23 | 456 | 20 | 435 | 1.39e-56 | 194 |
| MS.gene41651.t1 | AT3G12220 | 30.635 | 457 | 253 | 16 | 23 | 456 | 20 | 435 | 1.81e-56 | 193 |
| MS.gene41651.t1 | AT1G73310 | 30.067 | 449 | 268 | 15 | 21 | 456 | 26 | 441 | 2.79e-56 | 193 |
| MS.gene41651.t1 | AT1G73270 | 28.829 | 444 | 273 | 13 | 24 | 456 | 30 | 441 | 4.37e-56 | 192 |
| MS.gene41651.t1 | AT1G73270 | 28.829 | 444 | 273 | 13 | 24 | 456 | 30 | 441 | 6.03e-56 | 192 |
| MS.gene41651.t1 | AT3G12240 | 31.347 | 453 | 255 | 16 | 23 | 456 | 21 | 436 | 6.71e-56 | 192 |
| MS.gene41651.t1 | AT5G09640 | 29.605 | 456 | 278 | 14 | 27 | 456 | 27 | 465 | 1.29e-55 | 192 |
| MS.gene41651.t1 | AT1G33540 | 30.612 | 441 | 254 | 16 | 45 | 456 | 4 | 421 | 2.16e-55 | 190 |
| MS.gene41651.t1 | AT2G22980 | 30.189 | 424 | 251 | 13 | 19 | 431 | 17 | 406 | 3.63e-55 | 189 |
| MS.gene41651.t1 | AT2G22980 | 29.861 | 432 | 258 | 13 | 19 | 439 | 17 | 414 | 5.41e-55 | 189 |
| MS.gene41651.t1 | AT3G12203 | 30.048 | 416 | 239 | 12 | 56 | 456 | 1 | 379 | 7.70e-55 | 187 |
| MS.gene41651.t1 | AT2G22970 | 30.935 | 417 | 238 | 12 | 30 | 431 | 28 | 409 | 1.34e-53 | 185 |
| MS.gene41651.t1 | AT3G10450 | 30.211 | 427 | 240 | 13 | 24 | 431 | 26 | 413 | 1.43e-53 | 185 |
| MS.gene41651.t1 | AT3G12220 | 30.324 | 432 | 240 | 15 | 45 | 456 | 15 | 405 | 2.84e-53 | 184 |
| MS.gene41651.t1 | AT2G22970 | 30.645 | 434 | 256 | 12 | 30 | 451 | 28 | 428 | 4.35e-53 | 184 |
| MS.gene41651.t1 | AT3G10450 | 30.296 | 406 | 225 | 13 | 45 | 431 | 4 | 370 | 1.34e-50 | 176 |
| MS.gene41651.t1 | AT5G22980 | 29.977 | 437 | 257 | 18 | 34 | 454 | 91 | 494 | 2.76e-50 | 178 |
| MS.gene41651.t1 | AT3G45010 | 29.680 | 438 | 263 | 19 | 32 | 454 | 92 | 499 | 1.38e-49 | 177 |
| MS.gene41651.t1 | AT2G24000 | 33.550 | 307 | 178 | 9 | 167 | 460 | 108 | 401 | 1.51e-49 | 174 |
| MS.gene41651.t1 | AT2G24000 | 55.556 | 90 | 36 | 3 | 25 | 111 | 29 | 117 | 1.36e-21 | 97.1 |
| MS.gene41651.t1 | AT2G22920 | 30.216 | 417 | 240 | 14 | 16 | 415 | 13 | 395 | 2.39e-49 | 174 |
| MS.gene41651.t1 | AT3G56540 | 53.165 | 158 | 69 | 4 | 25 | 180 | 78 | 232 | 1.03e-48 | 168 |
| MS.gene41651.t1 | AT1G73290 | 30.958 | 407 | 236 | 15 | 21 | 415 | 25 | 398 | 5.40e-46 | 164 |
| MS.gene41651.t1 | AT3G10410 | 28.670 | 436 | 264 | 15 | 32 | 452 | 90 | 493 | 1.12e-45 | 166 |
| MS.gene41651.t1 | AT1G73310 | 29.126 | 412 | 247 | 14 | 21 | 419 | 26 | 405 | 2.80e-45 | 163 |
| MS.gene41651.t1 | AT2G22990 | 29.310 | 348 | 211 | 9 | 114 | 456 | 2 | 319 | 9.96e-44 | 156 |
| MS.gene41651.t1 | AT2G22990 | 29.023 | 348 | 212 | 9 | 114 | 456 | 2 | 319 | 4.26e-43 | 154 |
| MS.gene41651.t1 | AT2G22980 | 31.627 | 332 | 191 | 11 | 19 | 340 | 17 | 322 | 8.28e-42 | 152 |
| MS.gene41651.t1 | AT1G73290 | 36.522 | 230 | 133 | 7 | 21 | 240 | 25 | 251 | 8.10e-41 | 148 |
| MS.gene41651.t1 | AT3G12220 | 31.649 | 376 | 216 | 14 | 23 | 379 | 20 | 373 | 1.87e-40 | 149 |
| MS.gene41651.t1 | AT2G22920 | 31.737 | 334 | 184 | 11 | 16 | 336 | 13 | 315 | 2.04e-40 | 147 |
| MS.gene41651.t1 | AT1G73280 | 29.226 | 349 | 214 | 10 | 8 | 346 | 13 | 338 | 1.20e-39 | 147 |
| MS.gene41651.t1 | AT1G73280 | 26.611 | 357 | 229 | 10 | 103 | 456 | 13 | 339 | 2.67e-39 | 145 |
| MS.gene41651.t1 | AT2G22970 | 32.166 | 314 | 174 | 9 | 30 | 331 | 28 | 314 | 2.72e-39 | 144 |
| MS.gene41651.t1 | AT5G36180 | 27.247 | 356 | 228 | 10 | 103 | 456 | 13 | 339 | 8.25e-38 | 141 |
| MS.gene41651.t1 | AT5G36180 | 27.247 | 356 | 228 | 10 | 103 | 456 | 13 | 339 | 8.25e-38 | 141 |
| MS.gene41651.t1 | AT1G73280 | 26.453 | 344 | 220 | 10 | 116 | 456 | 1 | 314 | 8.79e-36 | 135 |
| MS.gene41651.t1 | AT1G15000 | 26.526 | 426 | 265 | 17 | 43 | 456 | 37 | 426 | 3.10e-31 | 125 |
| MS.gene41651.t1 | AT5G36180 | 26.284 | 331 | 214 | 9 | 103 | 431 | 13 | 315 | 3.36e-30 | 120 |
| MS.gene41651.t1 | AT2G22980 | 26.791 | 321 | 199 | 10 | 114 | 431 | 2 | 289 | 8.08e-30 | 118 |
| MS.gene41651.t1 | AT2G27920 | 27.594 | 424 | 265 | 16 | 44 | 440 | 37 | 445 | 1.88e-28 | 117 |
| MS.gene41651.t1 | AT1G73310 | 26.398 | 322 | 201 | 10 | 103 | 419 | 13 | 303 | 1.48e-26 | 109 |
| MS.gene41651.t1 | AT5G36180 | 25.796 | 314 | 203 | 9 | 103 | 414 | 13 | 298 | 6.33e-24 | 102 |
| MS.gene41651.t1 | AT5G22960 | 34.302 | 172 | 88 | 6 | 32 | 200 | 25 | 174 | 6.75e-24 | 99.0 |
| MS.gene41651.t1 | AT2G22920 | 27.273 | 286 | 167 | 10 | 180 | 456 | 3 | 256 | 1.96e-23 | 99.4 |
| MS.gene41651.t1 | AT2G27920 | 26.234 | 385 | 244 | 15 | 81 | 440 | 4 | 373 | 9.14e-20 | 91.3 |
| MS.gene41651.t1 | AT2G22960 | 28.369 | 141 | 94 | 3 | 316 | 456 | 51 | 184 | 3.83e-16 | 77.0 |
Find 82 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAAACCTCTTGTTCTT+TGG | 0.209048 | 3.4:-88538604 | MS.gene41651:CDS |
| ACCTCTTTGTTCAAAGGTTA+TGG | 0.222269 | 3.4:-88537460 | MS.gene41651:CDS |
| AGAGGCAAACATGCTTTATT+TGG | 0.233598 | 3.4:-88538382 | MS.gene41651:CDS |
| CGTGCTATTCAAATCATTCT+TGG | 0.238356 | 3.4:-88535503 | MS.gene41651:CDS |
| AATTCACCATTTGGTCTAAA+TGG | 0.239444 | 3.4:+88538524 | None:intergenic |
| AGAGAAACAAAACACTTTAA+AGG | 0.246230 | 3.4:+88538772 | None:intergenic |
| GGTGGGTGGACTCAAGTTTA+TGG | 0.246369 | 3.4:-88535598 | MS.gene41651:CDS |
| AACAAGATATTCAATCTTAA+AGG | 0.249651 | 3.4:-88537727 | MS.gene41651:CDS |
| GACAAAATTGTTACCCTTCC+TGG | 0.252638 | 3.4:-88538734 | MS.gene41651:CDS |
| ACACTTCCTACCTGTAAATT+AGG | 0.255971 | 3.4:+88536580 | None:intergenic |
| AACAGAGATTTGTTTCTAAC+TGG | 0.261748 | 3.4:-88537895 | MS.gene41651:CDS |
| CAACAGTTCCTTACAGAGTA+TGG | 0.262408 | 3.4:-88536367 | MS.gene41651:CDS |
| AATAGCACGAGTGATCTTTC+AGG | 0.286784 | 3.4:+88535517 | None:intergenic |
| CCTCTTGTTCTTTGGCTCAA+TGG | 0.297305 | 3.4:-88538596 | MS.gene41651:CDS |
| CCTCTTTGTTCAAAGGTTAT+GGG | 0.297500 | 3.4:-88537459 | MS.gene41651:CDS |
| GAGTTAAGGTCCTAATTTAC+AGG | 0.298396 | 3.4:-88536590 | MS.gene41651:intron |
| ATTCAAGGGCTGAATTCTTT+TGG | 0.305209 | 3.4:-88537578 | MS.gene41651:CDS |
| GGACCTGGTTGTTCTTCTCT+TGG | 0.328407 | 3.4:-88538572 | MS.gene41651:CDS |
| GTAGGTGCATTCTCAGAAAA+TGG | 0.330444 | 3.4:-88538548 | MS.gene41651:CDS |
| AATGAACATAGTTGGAATAA+AGG | 0.338350 | 3.4:-88538491 | MS.gene41651:intron |
| TTAATAAGAAATTCACCATT+TGG | 0.361078 | 3.4:+88538515 | None:intergenic |
| CTTTGGCTCAATGGAGGACC+TGG | 0.390446 | 3.4:-88538587 | MS.gene41651:CDS |
| TCAGTTGCATATTCTAGAAC+TGG | 0.396182 | 3.4:+88537606 | None:intergenic |
| ACTTGTTGAACCAACGTTCC+AGG | 0.404293 | 3.4:+88537932 | None:intergenic |
| GCACTTCATGCAAAACTTGT+TGG | 0.416149 | 3.4:-88537034 | MS.gene41651:CDS |
| AAGGGACAATCTTGTATTCC+TGG | 0.417025 | 3.4:-88537950 | MS.gene41651:CDS |
| AAATCTCTGTTTCTATATTG+AGG | 0.417674 | 3.4:+88537907 | None:intergenic |
| TTTATCAATGATCCAACAAC+AGG | 0.423621 | 3.4:+88536618 | None:intergenic |
| AGGTTACAAACTACTTAAAC+AGG | 0.431883 | 3.4:-88537072 | MS.gene41651:CDS |
| CCTTACAGAGTATGGTTTGA+AGG | 0.432469 | 3.4:-88536359 | MS.gene41651:CDS |
| CTCTGTGCTGTCACAGTCCA+AGG | 0.436842 | 3.4:-88537370 | MS.gene41651:CDS |
| ATTGATAAAAGCTGGAGTTA+AGG | 0.446975 | 3.4:-88536604 | MS.gene41651:CDS |
| GGTTGTTCTTCTCTTGGAGT+AGG | 0.448812 | 3.4:-88538566 | MS.gene41651:CDS |
| GTGCCAACACTTCCTGTTGT+TGG | 0.450313 | 3.4:-88536630 | MS.gene41651:CDS |
| TAAGAAAATCCAACTCCAAC+TGG | 0.455371 | 3.4:+88538354 | None:intergenic |
| TAAAGAAACTAGTAGATTTG+TGG | 0.457756 | 3.4:-88537427 | MS.gene41651:CDS |
| ATGCAACTGATTTCAATTCA+AGG | 0.458582 | 3.4:-88537593 | MS.gene41651:CDS |
| AGGGTGTGTCAGAAAACTTC+AGG | 0.465152 | 3.4:+88535466 | None:intergenic |
| CTCTCATTTGCCACAGTGAG+AGG | 0.471001 | 3.4:-88535568 | MS.gene41651:CDS |
| TTGTTCAAAGGTTATGGGAT+TGG | 0.472351 | 3.4:-88537454 | MS.gene41651:CDS |
| ATAGCCTTTCAACAATTCTC+AGG | 0.473579 | 3.4:-88538698 | MS.gene41651:CDS |
| AATGGACCATTTAGACCAAA+TGG | 0.474826 | 3.4:-88538530 | MS.gene41651:CDS |
| AAGACACTCACTTGAGGTTG+AGG | 0.475504 | 3.4:+88537339 | None:intergenic |
| ATCATAAGCTTTGCAAGTTG+AGG | 0.475887 | 3.4:+88537766 | None:intergenic |
| AGTATGGTTTGAAGGCCAAC+AGG | 0.477560 | 3.4:-88536351 | MS.gene41651:intron |
| TTTAATGAAACTTAGGTTGG+TGG | 0.479581 | 3.4:-88535616 | MS.gene41651:intron |
| CCTTCAAACCATACTCTGTA+AGG | 0.483426 | 3.4:+88536359 | None:intergenic |
| GGACTATGATGTGCTTAACT+TGG | 0.489157 | 3.4:-88536655 | MS.gene41651:CDS |
| GATCTTTCAGGCTGTGAGAA+AGG | 0.497374 | 3.4:+88535529 | None:intergenic |
| TTGGAGACACCAGTTGGAGT+TGG | 0.500117 | 3.4:-88538363 | MS.gene41651:CDS |
| ATCTTGTATTCCTGGAACGT+TGG | 0.501196 | 3.4:-88537942 | MS.gene41651:CDS |
| CTTGTTCTTTGGCTCAATGG+AGG | 0.503534 | 3.4:-88538593 | MS.gene41651:CDS |
| CTAACTGGGGAAAGTTATGC+AGG | 0.506489 | 3.4:-88537880 | MS.gene41651:intron |
| GACTCAGTGATTCCACTGAC+TGG | 0.508042 | 3.4:-88536437 | MS.gene41651:CDS |
| TGCAACTGATTTCAATTCAA+GGG | 0.511117 | 3.4:-88537592 | MS.gene41651:CDS |
| TCAAATCATTCTTGGAAGGA+AGG | 0.513553 | 3.4:-88535495 | MS.gene41651:CDS |
| TTAATGAAACTTAGGTTGGT+GGG | 0.518560 | 3.4:-88535615 | MS.gene41651:intron |
| ACAGAGATTTGTTTCTAACT+GGG | 0.518718 | 3.4:-88537894 | MS.gene41651:CDS |
| CTTTATTTGGAGACACCAGT+TGG | 0.520213 | 3.4:-88538369 | MS.gene41651:CDS |
| AGTTTCACCTCTTTGTTCAA+AGG | 0.523708 | 3.4:-88537466 | MS.gene41651:CDS |
| GTTGGATCATTGATAAAAGC+TGG | 0.524225 | 3.4:-88536612 | MS.gene41651:CDS |
| ACAGTGAATGACGAGGAAAC+AGG | 0.535990 | 3.4:-88538303 | MS.gene41651:intron |
| TGTCAGAAAACTTCAGGTAA+AGG | 0.539128 | 3.4:+88535472 | None:intergenic |
| CAGAGATTTGTTTCTAACTG+GGG | 0.566111 | 3.4:-88537893 | MS.gene41651:CDS |
| CCCATAACCTTTGAACAAAG+AGG | 0.567501 | 3.4:+88537459 | None:intergenic |
| AAGCTTCTGCTTCCAGTCAG+TGG | 0.568377 | 3.4:+88536425 | None:intergenic |
| GATCCAACAACAGGAAGTGT+TGG | 0.570777 | 3.4:+88536627 | None:intergenic |
| CCATTGAGCCAAAGAACAAG+AGG | 0.575023 | 3.4:+88538596 | None:intergenic |
| AACTTGTTGGAGTTCGCAAG+TGG | 0.581245 | 3.4:-88537021 | MS.gene41651:CDS |
| CTATTCAAATCATTCTTGGA+AGG | 0.581750 | 3.4:-88535499 | MS.gene41651:CDS |
| AGTTAAGCACATCATAGTCC+AGG | 0.589846 | 3.4:+88536658 | None:intergenic |
| ATGAAACTTAGGTTGGTGGG+TGG | 0.608032 | 3.4:-88535612 | MS.gene41651:intron |
| ATATCCTGAGAATTGTTGAA+AGG | 0.621984 | 3.4:+88538694 | None:intergenic |
| AGATGTATGTGTGGATGACA+AGG | 0.642449 | 3.4:-88537092 | MS.gene41651:CDS |
| TGAAATGATAGATGTATGTG+TGG | 0.646175 | 3.4:-88537101 | MS.gene41651:CDS |
| ACTTGTTGGAGTTCGCAAGT+GGG | 0.647506 | 3.4:-88537020 | MS.gene41651:CDS |
| AGGTTGAGGAGAAATAACCT+TGG | 0.661050 | 3.4:+88537353 | None:intergenic |
| AAACAGGAGAGATGTGCAAG+AGG | 0.664395 | 3.4:-88537056 | MS.gene41651:CDS |
| ACTCCAAGAGAAGAACAACC+AGG | 0.669050 | 3.4:+88538569 | None:intergenic |
| ATGTGCAGCACCTCTCACTG+TGG | 0.718656 | 3.4:+88535558 | None:intergenic |
| TACAACAACAGTGAATGACG+AGG | 0.719486 | 3.4:-88538310 | MS.gene41651:CDS |
| CTTGGACTGTGACAGCACAG+AGG | 0.766016 | 3.4:+88537371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAACTTGTAATTTTATT+AGG | - | chr3.4:88537478-88537497 | MS.gene41651:CDS | 10.0% |
| !!! | TATAAATTTTAATGAAACTT+AGG | - | chr3.4:88538657-88538676 | MS.gene41651:CDS | 10.0% |
| !! | AAATTCTGTCAAATTATTAT+TGG | + | chr3.4:88537046-88537065 | None:intergenic | 15.0% |
| !! | ATTAATATATATTTACCTGT+TGG | + | chr3.4:88537947-88537966 | None:intergenic | 15.0% |
| !! | TTATTAAAAATGAACATAGT+TGG | - | chr3.4:88535781-88535800 | MS.gene41651:intron | 15.0% |
| !!! | TCATTATTATTGAATCTTTT+TGG | - | chr3.4:88536003-88536022 | MS.gene41651:intron | 15.0% |
| !!! | TTATGTTTTTATACTTTCTT+AGG | - | chr3.4:88536093-88536112 | MS.gene41651:intron | 15.0% |
| !! | AAAATTTATGCATGTATTTC+AGG | - | chr3.4:88536481-88536500 | MS.gene41651:intron | 20.0% |
| !! | AACAAGATATTCAATCTTAA+AGG | - | chr3.4:88536553-88536572 | MS.gene41651:intron | 20.0% |
| !! | AGAATAAATCAAAAAACAGA+AGG | + | chr3.4:88537735-88537754 | None:intergenic | 20.0% |
| !! | CTTAGAATAAAAGTTAAATG+TGG | - | chr3.4:88537348-88537367 | MS.gene41651:intron | 20.0% |
| !! | TTAATAAGAAATTCACCATT+TGG | + | chr3.4:88535768-88535787 | None:intergenic | 20.0% |
| !!! | AATTTTAATGAAACTTAGGT+TGG | - | chr3.4:88538661-88538680 | MS.gene41651:CDS | 20.0% |
| !!! | ACATATTTTGTAATCTGAAA+CGG | - | chr3.4:88536286-88536305 | MS.gene41651:intron | 20.0% |
| !!! | TTTTTTGAATTGTTAAGCAA+GGG | - | chr3.4:88536312-88536331 | MS.gene41651:intron | 20.0% |
| ! | AAAGTTAAATGTGGTTTATG+CGG | - | chr3.4:88537357-88537376 | MS.gene41651:CDS | 25.0% |
| ! | AATGAACATAGTTGGAATAA+AGG | - | chr3.4:88535789-88535808 | MS.gene41651:intron | 25.0% |
| ! | ACTCTTTGGATCTAATAAAA+GGG | - | chr3.4:88538369-88538388 | MS.gene41651:CDS | 25.0% |
| ! | AGAGAAACAAAACACTTTAA+AGG | + | chr3.4:88535511-88535530 | None:intergenic | 25.0% |
| ! | TAAAGAAACTAGTAGATTTG+TGG | - | chr3.4:88536853-88536872 | MS.gene41651:intron | 25.0% |
| ! | TTATAATCTAAACATAGCCT+CGG | - | chr3.4:88538424-88538443 | MS.gene41651:intron | 25.0% |
| !! | AGAAATCACTGTCAAAATTT+TGG | - | chr3.4:88537990-88538009 | MS.gene41651:intron | 25.0% |
| !! | CTTTTAAATCCTACTTCTAT+TGG | - | chr3.4:88536055-88536074 | MS.gene41651:intron | 25.0% |
| !! | GTTGGATTTTCTTATGTTAA+AGG | - | chr3.4:88535935-88535954 | MS.gene41651:intron | 25.0% |
| !!! | AAATCTCTGTTTCTATATTG+AGG | + | chr3.4:88536376-88536395 | None:intergenic | 25.0% |
| !!! | CATGTTTTAAAAAGCAGTAA+AGG | + | chr3.4:88536437-88536456 | None:intergenic | 25.0% |
| !!! | CTTTTTTGAATTGTTAAGCA+AGG | - | chr3.4:88536311-88536330 | MS.gene41651:intron | 25.0% |
| AATTCACCATTTGGTCTAAA+TGG | + | chr3.4:88535759-88535778 | None:intergenic | 30.0% | |
| ACCAAAATTGAATTGCAGTT+GGG | - | chr3.4:88536647-88536666 | MS.gene41651:CDS | 30.0% | |
| AGGTTACAAACTACTTAAAC+AGG | - | chr3.4:88537208-88537227 | MS.gene41651:intron | 30.0% | |
| ATATCCTGAGAATTGTTGAA+AGG | + | chr3.4:88535589-88535608 | None:intergenic | 30.0% | |
| ATTGAGACGTCATTTAACTA+AGG | + | chr3.4:88538310-88538329 | None:intergenic | 30.0% | |
| ATTGATAAAAGCTGGAGTTA+AGG | - | chr3.4:88537676-88537695 | MS.gene41651:intron | 30.0% | |
| CAAAAATTGGCTAGACAATT+AGG | - | chr3.4:88537882-88537901 | MS.gene41651:CDS | 30.0% | |
| CACTCTTTGGATCTAATAAA+AGG | - | chr3.4:88538368-88538387 | MS.gene41651:CDS | 30.0% | |
| CAGAAGCTTAGTTCAAAAAT+TGG | - | chr3.4:88537869-88537888 | MS.gene41651:intron | 30.0% | |
| CAGACAATACTTCATAAAGT+CGG | + | chr3.4:88538254-88538273 | None:intergenic | 30.0% | |
| CTATTCAAATCATTCTTGGA+AGG | - | chr3.4:88538781-88538800 | MS.gene41651:CDS | 30.0% | |
| TACCAAAATTGAATTGCAGT+TGG | - | chr3.4:88536646-88536665 | MS.gene41651:CDS | 30.0% | |
| TCAACAGCTAGAAAATTGTA+AGG | + | chr3.4:88536626-88536645 | None:intergenic | 30.0% | |
| TGAAATGATAGATGTATGTG+TGG | - | chr3.4:88537179-88537198 | MS.gene41651:intron | 30.0% | |
| TTAGTTAAATGACGTCTCAA+TGG | - | chr3.4:88538309-88538328 | MS.gene41651:CDS | 30.0% | |
| TTTATCAATGATCCAACAAC+AGG | + | chr3.4:88537665-88537684 | None:intergenic | 30.0% | |
| ! | ATGCAACTGATTTCAATTCA+AGG | - | chr3.4:88536687-88536706 | MS.gene41651:intron | 30.0% |
| ! | ATTCTGTTGCTTAAACTAGA+GGG | - | chr3.4:88537750-88537769 | MS.gene41651:CDS | 30.0% |
| ! | CTTTCTGGTCACTTATAAAA+TGG | + | chr3.4:88538018-88538037 | None:intergenic | 30.0% |
| ! | TATTCTGTTGCTTAAACTAG+AGG | - | chr3.4:88537749-88537768 | MS.gene41651:CDS | 30.0% |
| ! | TGATATCAGTATGATGATGA+TGG | - | chr3.4:88536254-88536273 | MS.gene41651:intron | 30.0% |
| ! | TGCAACTGATTTCAATTCAA+GGG | - | chr3.4:88536688-88536707 | MS.gene41651:intron | 30.0% |
| !! | AACAGAGATTTGTTTCTAAC+TGG | - | chr3.4:88536385-88536404 | MS.gene41651:CDS | 30.0% |
| !! | ACAGAGATTTGTTTCTAACT+GGG | - | chr3.4:88536386-88536405 | MS.gene41651:CDS | 30.0% |
| !! | ATAAAAGGGTGCTTAGATAT+AGG | - | chr3.4:88538383-88538402 | MS.gene41651:CDS | 30.0% |
| !! | TAAAAGGGTGCTTAGATATA+GGG | - | chr3.4:88538384-88538403 | MS.gene41651:intron | 30.0% |
| !! | TTAATGAAACTTAGGTTGGT+GGG | - | chr3.4:88538665-88538684 | MS.gene41651:CDS | 30.0% |
| !! | TTTAATGAAACTTAGGTTGG+TGG | - | chr3.4:88538664-88538683 | MS.gene41651:CDS | 30.0% |
| !!! | AAGGTTTTAAATTGCAGTTG+TGG | - | chr3.4:88537309-88537328 | MS.gene41651:intron | 30.0% |
| !!! | AGTTATTTTTTGTGTTGCAG+AGG | - | chr3.4:88535880-88535899 | MS.gene41651:intron | 30.0% |
| !!! | CTACTTTTTCCAATAGAAGT+AGG | + | chr3.4:88536067-88536086 | None:intergenic | 30.0% |
| !!! | GTTATTTTAGCTTAGTGAGA+AGG | + | chr3.4:88537465-88537484 | None:intergenic | 30.0% |
| AAAAGGATCTTTCCACTTTG+GGG | + | chr3.4:88538080-88538099 | None:intergenic | 35.0% | |
| AAAGATCATCAGTGATCACA+TGG | + | chr3.4:88537582-88537601 | None:intergenic | 35.0% | |
| AAGACTAAAGCCAATGGAAA+AGG | + | chr3.4:88538097-88538116 | None:intergenic | 35.0% | |
| AAGGACCAAGGTTATAAAAC+AGG | + | chr3.4:88537446-88537465 | None:intergenic | 35.0% | |
| AAGGTTATAAAACAGGTCCA+CGG | + | chr3.4:88537439-88537458 | None:intergenic | 35.0% | |
| AATGGACCATTTAGACCAAA+TGG | - | chr3.4:88535750-88535769 | MS.gene41651:intron | 35.0% | |
| ACACTTCCTACCTGTAAATT+AGG | + | chr3.4:88537703-88537722 | None:intergenic | 35.0% | |
| ACCTCTTTGTTCAAAGGTTA+TGG | - | chr3.4:88536820-88536839 | MS.gene41651:intron | 35.0% | |
| AGTTTCACCTCTTTGTTCAA+AGG | - | chr3.4:88536814-88536833 | MS.gene41651:intron | 35.0% | |
| ATAGCCTTTCAACAATTCTC+AGG | - | chr3.4:88535582-88535601 | MS.gene41651:CDS | 35.0% | |
| ATCATAAGCTTTGCAAGTTG+AGG | + | chr3.4:88536517-88536536 | None:intergenic | 35.0% | |
| CAATGGTTAAGGTCGTAAAA+TGG | + | chr3.4:88538571-88538590 | None:intergenic | 35.0% | |
| CCAAAATTGAATTGCAGTTG+GGG | - | chr3.4:88536648-88536667 | MS.gene41651:CDS | 35.0% | |
| CCTCTTTGTTCAAAGGTTAT+GGG | - | chr3.4:88536821-88536840 | MS.gene41651:intron | 35.0% | |
| CGTACAATACCTCATAAAAG+TGG | + | chr3.4:88538596-88538615 | None:intergenic | 35.0% | |
| CTTCAAAACCTCTTGTTCTT+TGG | - | chr3.4:88535676-88535695 | MS.gene41651:intron | 35.0% | |
| GAAAAGGATCTTTCCACTTT+GGG | + | chr3.4:88538081-88538100 | None:intergenic | 35.0% | |
| GAGTTAAGGTCCTAATTTAC+AGG | - | chr3.4:88537690-88537709 | MS.gene41651:intron | 35.0% | |
| GCTTCAAAGACTATAAGTGA+TGG | + | chr3.4:88536997-88537016 | None:intergenic | 35.0% | |
| GTGCATTATTATTGCTACAG+TGG | - | chr3.4:88537813-88537832 | MS.gene41651:intron | 35.0% | |
| GTTGGATCATTGATAAAAGC+TGG | - | chr3.4:88537668-88537687 | MS.gene41651:intron | 35.0% | |
| TAAAAGTGGTGCAATGGTTA+AGG | + | chr3.4:88538582-88538601 | None:intergenic | 35.0% | |
| TAACTAAGGATAAAACTGCG+AGG | + | chr3.4:88538296-88538315 | None:intergenic | 35.0% | |
| TAAGAAAATCCAACTCCAAC+TGG | + | chr3.4:88535929-88535948 | None:intergenic | 35.0% | |
| TAAGGTCCTAATTTACAGGT+AGG | - | chr3.4:88537694-88537713 | MS.gene41651:intron | 35.0% | |
| TCAAATCATTCTTGGAAGGA+AGG | - | chr3.4:88538785-88538804 | MS.gene41651:CDS | 35.0% | |
| TCAATGAATGCATGTCATTG+TGG | + | chr3.4:88535842-88535861 | None:intergenic | 35.0% | |
| TTGACAAAGACTAAAGCCAA+TGG | + | chr3.4:88538103-88538122 | None:intergenic | 35.0% | |
| TTGTTCAAAGGTTATGGGAT+TGG | - | chr3.4:88536826-88536845 | MS.gene41651:intron | 35.0% | |
| ! | AGAGGCAAACATGCTTTATT+TGG | - | chr3.4:88535898-88535917 | MS.gene41651:intron | 35.0% |
| ! | ATTCAAGGGCTGAATTCTTT+TGG | - | chr3.4:88536702-88536721 | MS.gene41651:intron | 35.0% |
| ! | CATTTCATTTGCTTGCTACA+AGG | + | chr3.4:88537166-88537185 | None:intergenic | 35.0% |
| ! | CGTGCTATTCAAATCATTCT+TGG | - | chr3.4:88538777-88538796 | MS.gene41651:CDS | 35.0% |
| ! | CTGATGATCTTTGTCTGTTT+TGG | - | chr3.4:88537590-88537609 | MS.gene41651:CDS | 35.0% |
| ! | GGCTTTAGTCTTTGTCAATT+GGG | - | chr3.4:88538105-88538124 | MS.gene41651:intron | 35.0% |
| ! | TGTTGAAAGGCTATGTTTTG+AGG | + | chr3.4:88535576-88535595 | None:intergenic | 35.0% |
| !! | ATGTGGGACTTTTTAGTGTA+CGG | - | chr3.4:88538457-88538476 | MS.gene41651:intron | 35.0% |
| !! | CAGAGATTTGTTTCTAACTG+GGG | - | chr3.4:88536387-88536406 | MS.gene41651:CDS | 35.0% |
| !! | CCAAAGAGTGCTTACATATA+GGG | + | chr3.4:88538358-88538377 | None:intergenic | 35.0% |
| !! | TCAGTTGCATATTCTAGAAC+TGG | + | chr3.4:88536677-88536696 | None:intergenic | 35.0% |
| !! | TCCAAAGAGTGCTTACATAT+AGG | + | chr3.4:88538359-88538378 | None:intergenic | 35.0% |
| !! | TGGCTTTAGTCTTTGTCAAT+TGG | - | chr3.4:88538104-88538123 | MS.gene41651:intron | 35.0% |
| !! | TTATGAGGTATTGTACGCTT+AGG | - | chr3.4:88538599-88538618 | MS.gene41651:CDS | 35.0% |
| !!! | AGAACAAGAGGTTTTGAAGA+TGG | + | chr3.4:88535675-88535694 | None:intergenic | 35.0% |
| AAAGGATCTTTCCACTTTGG+GGG | + | chr3.4:88538079-88538098 | None:intergenic | 40.0% | |
| AAGGGACAATCTTGTATTCC+TGG | - | chr3.4:88536330-88536349 | MS.gene41651:intron | 40.0% | |
| AAGTCGGTACGAAAGATTTG+AGG | + | chr3.4:88538238-88538257 | None:intergenic | 40.0% | |
| AATAGCACGAGTGATCTTTC+AGG | + | chr3.4:88538766-88538785 | None:intergenic | 40.0% | |
| ACCTCATAAAAGTGGTGCAA+TGG | + | chr3.4:88538588-88538607 | None:intergenic | 40.0% | |
| AGATGTATGTGTGGATGACA+AGG | - | chr3.4:88537188-88537207 | MS.gene41651:intron | 40.0% | |
| AGGTTGAGGAGAAATAACCT+TGG | + | chr3.4:88536930-88536949 | None:intergenic | 40.0% | |
| AGTTAAGCACATCATAGTCC+AGG | + | chr3.4:88537625-88537644 | None:intergenic | 40.0% | |
| ATCTTGTATTCCTGGAACGT+TGG | - | chr3.4:88536338-88536357 | MS.gene41651:intron | 40.0% | |
| CAACAGTTCCTTACAGAGTA+TGG | - | chr3.4:88537913-88537932 | MS.gene41651:CDS | 40.0% | |
| CAGCAAGTAAGTCATTCTCA+AGG | - | chr3.4:88537290-88537309 | MS.gene41651:intron | 40.0% | |
| CCCATAACCTTTGAACAAAG+AGG | + | chr3.4:88536824-88536843 | None:intergenic | 40.0% | |
| CCCTATATGTAAGCACTCTT+TGG | - | chr3.4:88538355-88538374 | MS.gene41651:CDS | 40.0% | |
| CCTTACAGAGTATGGTTTGA+AGG | - | chr3.4:88537921-88537940 | MS.gene41651:CDS | 40.0% | |
| CCTTCAAACCATACTCTGTA+AGG | + | chr3.4:88537924-88537943 | None:intergenic | 40.0% | |
| GACAAAATTGTTACCCTTCC+TGG | - | chr3.4:88535546-88535565 | MS.gene41651:CDS | 40.0% | |
| GACCAGTGAAGCTAAATCAT+TGG | + | chr3.4:88537504-88537523 | None:intergenic | 40.0% | |
| GCACTTCATGCAAAACTTGT+TGG | - | chr3.4:88537246-88537265 | MS.gene41651:intron | 40.0% | |
| GGAAAAGGATCTTTCCACTT+TGG | + | chr3.4:88538082-88538101 | None:intergenic | 40.0% | |
| GGACTATGATGTGCTTAACT+TGG | - | chr3.4:88537625-88537644 | MS.gene41651:intron | 40.0% | |
| GTAGGTGCATTCTCAGAAAA+TGG | - | chr3.4:88535732-88535751 | MS.gene41651:intron | 40.0% | |
| TACAACAACAGTGAATGACG+AGG | - | chr3.4:88535970-88535989 | MS.gene41651:intron | 40.0% | |
| TCATCAGTGATCACATGGAT+TGG | + | chr3.4:88537577-88537596 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTACATATAGGGA+CGG | + | chr3.4:88538354-88538373 | None:intergenic | 40.0% |
| ! | CCCCAACTGCAATTCAATTT+TGG | + | chr3.4:88536651-88536670 | None:intergenic | 40.0% |
| ! | CTTTATTTGGAGACACCAGT+TGG | - | chr3.4:88535911-88535930 | MS.gene41651:intron | 40.0% |
| ! | GCTGAATTCTTTTGGTCACA+TGG | - | chr3.4:88536710-88536729 | MS.gene41651:intron | 40.0% |
| ! | GGAAAAGCATGAGAAAGGAA+AGG | + | chr3.4:88536976-88536995 | None:intergenic | 40.0% |
| ! | GTGATGGAAAAGCATGAGAA+AGG | + | chr3.4:88536981-88537000 | None:intergenic | 40.0% |
| ! | GTGGAAAGATCCTTTTCCAT+TGG | - | chr3.4:88538084-88538103 | MS.gene41651:intron | 40.0% |
| ! | GTGGACCTGTTTTATAACCT+TGG | - | chr3.4:88537438-88537457 | MS.gene41651:CDS | 40.0% |
| ! | GTTGAGATTAAGGTGCTAGA+GGG | - | chr3.4:88538506-88538525 | MS.gene41651:CDS | 40.0% |
| ! | TTGAGATTAAGGTGCTAGAG+GGG | - | chr3.4:88538507-88538526 | MS.gene41651:CDS | 40.0% |
| !! | ACCATTGCACCACTTTTATG+AGG | - | chr3.4:88538584-88538603 | MS.gene41651:CDS | 40.0% |
| AAACAGGAGAGATGTGCAAG+AGG | - | chr3.4:88537224-88537243 | MS.gene41651:intron | 45.0% | |
| AAGACACTCACTTGAGGTTG+AGG | + | chr3.4:88536944-88536963 | None:intergenic | 45.0% | |
| AAGGTCGTAAAATGGCCTCT+AGG | + | chr3.4:88538563-88538582 | None:intergenic | 45.0% | |
| ACAGTGAATGACGAGGAAAC+AGG | - | chr3.4:88535977-88535996 | MS.gene41651:intron | 45.0% | |
| ACTCCAAGAGAAGAACAACC+AGG | + | chr3.4:88535714-88535733 | None:intergenic | 45.0% | |
| AGTATGGTTTGAAGGCCAAC+AGG | - | chr3.4:88537929-88537948 | MS.gene41651:CDS | 45.0% | |
| CAAGAGAAGACACTCACTTG+AGG | + | chr3.4:88536950-88536969 | None:intergenic | 45.0% | |
| CCATTGAGCCAAAGAACAAG+AGG | + | chr3.4:88535687-88535706 | None:intergenic | 45.0% | |
| CCTCGGTTCTTACGTAATGT+GGG | - | chr3.4:88538441-88538460 | MS.gene41651:intron | 45.0% | |
| CTAACTGGGGAAAGTTATGC+AGG | - | chr3.4:88536400-88536419 | MS.gene41651:CDS | 45.0% | |
| GATCTTTCAGGCTGTGAGAA+AGG | + | chr3.4:88538754-88538773 | None:intergenic | 45.0% | |
| GGTTGTTCTTCTCTTGGAGT+AGG | - | chr3.4:88535714-88535733 | MS.gene41651:intron | 45.0% | |
| TAGCTTAGTGAGAAGGACCA+AGG | + | chr3.4:88537458-88537477 | None:intergenic | 45.0% | |
| TGAGGCTGAGGTTGAGATTA+AGG | - | chr3.4:88538496-88538515 | MS.gene41651:CDS | 45.0% | |
| TGCTTACATATAGGGACGGA+GGG | + | chr3.4:88538350-88538369 | None:intergenic | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | - | chr3.4:88538392-88538411 | MS.gene41651:intron | 45.0% | |
| TGTCTTCGCAACCTCAAATG+AGG | + | chr3.4:88537383-88537402 | None:intergenic | 45.0% | |
| ! | ACTTGTTGAACCAACGTTCC+AGG | + | chr3.4:88536351-88536370 | None:intergenic | 45.0% |
| ! | ACTTGTTGGAGTTCGCAAGT+GGG | - | chr3.4:88537260-88537279 | MS.gene41651:intron | 45.0% |
| ! | AGGGTGCTTAGATATAGGGA+CGG | - | chr3.4:88538388-88538407 | MS.gene41651:intron | 45.0% |
| ! | CCTCTTGTTCTTTGGCTCAA+TGG | - | chr3.4:88535684-88535703 | MS.gene41651:intron | 45.0% |
| ! | CGATTTGGGCTGTGACATTA+AGG | + | chr3.4:88537412-88537431 | None:intergenic | 45.0% |
| ! | CTTGTTCTTTGGCTCAATGG+AGG | - | chr3.4:88535687-88535706 | MS.gene41651:intron | 45.0% |
| ! | GATCCAACAACAGGAAGTGT+TGG | + | chr3.4:88537656-88537675 | None:intergenic | 45.0% |
| ! | GGCCAATGATTTAGCTTCAC+TGG | - | chr3.4:88537499-88537518 | MS.gene41651:CDS | 45.0% |
| ! | GGTTGAGATTAAGGTGCTAG+AGG | - | chr3.4:88538505-88538524 | MS.gene41651:CDS | 45.0% |
| !! | AACTTGTTGGAGTTCGCAAG+TGG | - | chr3.4:88537259-88537278 | MS.gene41651:intron | 45.0% |
| !! | ATGAAACTTAGGTTGGTGGG+TGG | - | chr3.4:88538668-88538687 | MS.gene41651:CDS | 45.0% |
| !!! | CTGTTTTGGTAACAGTGTCC+TGG | - | chr3.4:88537604-88537623 | MS.gene41651:CDS | 45.0% |
| !!! | GCTATGTTTTGAGGTTGTCC+AGG | + | chr3.4:88535567-88535586 | None:intergenic | 45.0% |
| !!! | GTTTTGAGGTTGTCCAGGAA+GGG | + | chr3.4:88535562-88535581 | None:intergenic | 45.0% |
| !!! | TGTTTTGAGGTTGTCCAGGA+AGG | + | chr3.4:88535563-88535582 | None:intergenic | 45.0% |
| AAGCCTTCAGTGGAGTCACT+AGG | - | chr3.4:88538035-88538054 | MS.gene41651:intron | 50.0% | |
| AAGCTTCTGCTTCCAGTCAG+TGG | + | chr3.4:88537858-88537877 | None:intergenic | 50.0% | |
| AGCCTTCAGTGGAGTCACTA+GGG | - | chr3.4:88538036-88538055 | MS.gene41651:intron | 50.0% | |
| AGGTCCACGGACAACGATTT+GGG | + | chr3.4:88537426-88537445 | None:intergenic | 50.0% | |
| AGTGACCAGAAAGCCTTCAG+TGG | - | chr3.4:88538025-88538044 | MS.gene41651:intron | 50.0% | |
| ATCCCTAGTGACTCCACTGA+AGG | + | chr3.4:88538041-88538060 | None:intergenic | 50.0% | |
| ATCTCAACCTCAGCCTCAAC+CGG | + | chr3.4:88538494-88538513 | None:intergenic | 50.0% | |
| CCCACATTACGTAAGAACCG+AGG | + | chr3.4:88538444-88538463 | None:intergenic | 50.0% | |
| CTCTCATTTGCCACAGTGAG+AGG | - | chr3.4:88538712-88538731 | MS.gene41651:CDS | 50.0% | |
| GACTACTCTTTCCCCCAAAG+TGG | - | chr3.4:88538065-88538084 | MS.gene41651:intron | 50.0% | |
| GACTCAGTGATTCCACTGAC+TGG | - | chr3.4:88537843-88537862 | MS.gene41651:intron | 50.0% | |
| GCCTCGGTTCTTACGTAATG+TGG | - | chr3.4:88538440-88538459 | MS.gene41651:intron | 50.0% | |
| GGACCTGGTTGTTCTTCTCT+TGG | - | chr3.4:88535708-88535727 | MS.gene41651:intron | 50.0% | |
| GGTTTATGCGGCCTCATTTG+AGG | - | chr3.4:88537369-88537388 | MS.gene41651:CDS | 50.0% | |
| GTGCCAACACTTCCTGTTGT+TGG | - | chr3.4:88537650-88537669 | MS.gene41651:intron | 50.0% | |
| GTGCTTACATATAGGGACGG+AGG | + | chr3.4:88538351-88538370 | None:intergenic | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | - | chr3.4:88538391-88538410 | MS.gene41651:intron | 50.0% | |
| TGACTCCACTGAAGGCTTTC+TGG | + | chr3.4:88538033-88538052 | None:intergenic | 50.0% | |
| TTGGAGACACCAGTTGGAGT+TGG | - | chr3.4:88535917-88535936 | MS.gene41651:intron | 50.0% | |
| ! | GGTGGGTGGACTCAAGTTTA+TGG | - | chr3.4:88538682-88538701 | MS.gene41651:CDS | 50.0% |
| ! | GTGTACGGAACACTAGTCTC+CGG | - | chr3.4:88538472-88538491 | MS.gene41651:intron | 50.0% |
| ACAGCCCAAATCGTTGTCCG+TGG | - | chr3.4:88537419-88537438 | MS.gene41651:CDS | 55.0% | |
| AGAGCCTAAGCCACACACGA+GGG | + | chr3.4:88538540-88538559 | None:intergenic | 55.0% | |
| ATGTGCAGCACCTCTCACTG+TGG | + | chr3.4:88538725-88538744 | None:intergenic | 55.0% | |
| CAGGTCCACGGACAACGATT+TGG | + | chr3.4:88537427-88537446 | None:intergenic | 55.0% | |
| CTCTGTGCTGTCACAGTCCA+AGG | - | chr3.4:88536910-88536929 | MS.gene41651:intron | 55.0% | |
| CTTGGACTGTGACAGCACAG+AGG | + | chr3.4:88536912-88536931 | None:intergenic | 55.0% | |
| TGTGGCTTAGGCTCTCCTAG+AGG | - | chr3.4:88538545-88538564 | MS.gene41651:CDS | 55.0% | |
| ! | CTTTGGCTCAATGGAGGACC+TGG | - | chr3.4:88535693-88535712 | MS.gene41651:intron | 55.0% |
| ! | GGAACACTAGTCTCCGGTTG+AGG | - | chr3.4:88538478-88538497 | MS.gene41651:intron | 55.0% |
| CTAGTCTCCGGTTGAGGCTG+AGG | - | chr3.4:88538484-88538503 | MS.gene41651:intron | 60.0% | |
| GAGAGCCTAAGCCACACACG+AGG | + | chr3.4:88538541-88538560 | None:intergenic | 60.0% | |
| TCAGCCCTCGTGTGTGGCTT+AGG | - | chr3.4:88538533-88538552 | MS.gene41651:CDS | 60.0% | |
| ! | GGGTTTTCAGCCCTCGTGTG+TGG | - | chr3.4:88538527-88538546 | MS.gene41651:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 88535474 | 88538828 | 88535474 | ID=MS.gene41651 |
| chr3.4 | mRNA | 88535474 | 88538828 | 88535474 | ID=MS.gene41651.t1;Parent=MS.gene41651 |
| chr3.4 | exon | 88538492 | 88538828 | 88538492 | ID=MS.gene41651.t1.exon1;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88538492 | 88538828 | 88538492 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88538304 | 88538402 | 88538304 | ID=MS.gene41651.t1.exon2;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88538304 | 88538402 | 88538304 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88537881 | 88537973 | 88537881 | ID=MS.gene41651.t1.exon3;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88537881 | 88537973 | 88537881 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88537720 | 88537799 | 88537720 | ID=MS.gene41651.t1.exon4;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88537720 | 88537799 | 88537720 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88537350 | 88537637 | 88537350 | ID=MS.gene41651.t1.exon5;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88537350 | 88537637 | 88537350 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88537007 | 88537131 | 88537007 | ID=MS.gene41651.t1.exon6;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88537007 | 88537131 | 88537007 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88536591 | 88536683 | 88536591 | ID=MS.gene41651.t1.exon7;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88536591 | 88536683 | 88536591 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88536352 | 88536469 | 88536352 | ID=MS.gene41651.t1.exon8;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88536352 | 88536469 | 88536352 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| chr3.4 | exon | 88535474 | 88535623 | 88535474 | ID=MS.gene41651.t1.exon9;Parent=MS.gene41651.t1 |
| chr3.4 | CDS | 88535474 | 88535623 | 88535474 | ID=cds.MS.gene41651.t1;Parent=MS.gene41651.t1 |
| Gene Sequence |
| Protein sequence |
