Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06998.t1 | XP_013450364.1 | 99.5 | 803 | 4 | 0 | 1 | 803 | 1 | 803 | 0.00E+00 | 1526.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06998.t1 | F4JHH5 | 71.6 | 803 | 207 | 3 | 4 | 803 | 3 | 787 | 0.0e+00 | 1097.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06998.t1 | A0A072U3Y3 | 99.5 | 803 | 4 | 0 | 1 | 803 | 1 | 803 | 0.0e+00 | 1526.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06998 | 0.821855 | 3.23E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene06998 | 0.841509 | 4.55E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene06998 | 0.834768 | 2.48E-56 | -1.69E-46 |
| MS.gene049685 | MS.gene06998 | 0.817469 | 3.24E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene06998 | 0.819622 | 1.05E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene06998 | 0.832867 | 7.40E-56 | -1.69E-46 |
| MS.gene04998 | MS.gene06998 | 0.824076 | 9.82E-54 | -1.69E-46 |
| MS.gene050084 | MS.gene06998 | 0.812379 | 4.37E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene06998 | 0.836554 | 8.74E-57 | -1.69E-46 |
| MS.gene050213 | MS.gene06998 | 0.830687 | 2.55E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene06998 | 0.876226 | 1.65E-68 | -1.69E-46 |
| MS.gene050384 | MS.gene06998 | 0.826696 | 2.35E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene06998 | 0.826312 | 2.91E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene06998 | 0.863 | 3.40E-64 | -1.69E-46 |
| MS.gene050551 | MS.gene06998 | 0.85105 | 1.14E-60 | -1.69E-46 |
| MS.gene050646 | MS.gene06998 | 0.873723 | 1.18E-67 | -1.69E-46 |
| MS.gene050654 | MS.gene06998 | 0.870329 | 1.58E-66 | -1.69E-46 |
| MS.gene050689 | MS.gene06998 | 0.851331 | 9.51E-61 | -1.69E-46 |
| MS.gene050752 | MS.gene06998 | 0.812943 | 3.29E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene06998 | 0.867343 | 1.47E-65 | -1.69E-46 |
| MS.gene050931 | MS.gene06998 | 0.853022 | 3.14E-61 | -1.69E-46 |
| MS.gene050941 | MS.gene06998 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene06998 | 0.862369 | 5.32E-64 | -1.69E-46 |
| MS.gene051003 | MS.gene06998 | 0.852248 | 5.23E-61 | -1.69E-46 |
| MS.gene051043 | MS.gene06998 | 0.849298 | 3.54E-60 | -1.69E-46 |
| MS.gene051102 | MS.gene06998 | 0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene06998 | 0.803986 | 2.68E-49 | -1.69E-46 |
| MS.gene051226 | MS.gene06998 | 0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene051233 | MS.gene06998 | 0.854091 | 1.55E-61 | -1.69E-46 |
| MS.gene051234 | MS.gene06998 | 0.899193 | 2.52E-77 | -1.69E-46 |
| MS.gene051343 | MS.gene06998 | 0.881171 | 2.99E-70 | -1.69E-46 |
| MS.gene051365 | MS.gene06998 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene051381 | MS.gene06998 | 0.863438 | 2.49E-64 | -1.69E-46 |
| MS.gene051382 | MS.gene06998 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene051450 | MS.gene06998 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene06998 | 0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene06998 | 0.808139 | 3.59E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene06998 | 0.808983 | 2.37E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene06998 | 0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene06998 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene06998 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene06998 | 0.826128 | 3.21E-54 | -1.69E-46 |
| MS.gene052016 | MS.gene06998 | 0.817002 | 4.13E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene06998 | 0.86096 | 1.43E-63 | -1.69E-46 |
| MS.gene052242 | MS.gene06998 | -0.829599 | 4.70E-55 | -1.69E-46 |
| MS.gene052296 | MS.gene06998 | 0.817401 | 3.36E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene06998 | 0.869042 | 4.16E-66 | -1.69E-46 |
| MS.gene052335 | MS.gene06998 | 0.868078 | 8.53E-66 | -1.69E-46 |
| MS.gene052342 | MS.gene06998 | 0.854008 | 1.64E-61 | -1.69E-46 |
| MS.gene052434 | MS.gene06998 | 0.827088 | 1.90E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene06998 | 0.826469 | 2.67E-54 | -1.69E-46 |
| MS.gene052514 | MS.gene06998 | 0.824736 | 6.87E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene06998 | 0.806443 | 8.21E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene06998 | 0.831718 | 1.42E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene06998 | 0.880883 | 3.80E-70 | -1.69E-46 |
| MS.gene052776 | MS.gene06998 | 0.814503 | 1.49E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene06998 | 0.829379 | 5.32E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene06998 | 0.86459 | 1.09E-64 | -1.69E-46 |
| MS.gene053079 | MS.gene06998 | 0.841986 | 3.41E-58 | -1.69E-46 |
| MS.gene053143 | MS.gene06998 | 0.870464 | 1.43E-66 | -1.69E-46 |
| MS.gene053456 | MS.gene06998 | 0.814011 | 1.91E-51 | -1.69E-46 |
| MS.gene053564 | MS.gene06998 | 0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene053620 | MS.gene06998 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene06998 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene053726 | MS.gene06998 | 0.824956 | 6.09E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene06998 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene053895 | MS.gene06998 | -0.801934 | 7.12E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene06998 | 0.830737 | 2.48E-55 | -1.69E-46 |
| MS.gene054178 | MS.gene06998 | 0.840216 | 9.94E-58 | -1.69E-46 |
| MS.gene054403 | MS.gene06998 | 0.810301 | 1.23E-50 | -1.69E-46 |
| MS.gene054413 | MS.gene06998 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene054824 | MS.gene06998 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene06998 | 0.840387 | 8.97E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene06998 | 0.843407 | 1.43E-58 | -1.69E-46 |
| MS.gene055311 | MS.gene06998 | 0.844909 | 5.64E-59 | -1.69E-46 |
| MS.gene055313 | MS.gene06998 | 0.814672 | 1.37E-51 | -1.69E-46 |
| MS.gene055314 | MS.gene06998 | 0.811701 | 6.14E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene06998 | 0.80801 | 3.82E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene06998 | 0.87727 | 7.19E-69 | -1.69E-46 |
| MS.gene055864 | MS.gene06998 | 0.828859 | 7.11E-55 | -1.69E-46 |
| MS.gene055975 | MS.gene06998 | 0.809032 | 2.31E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene06998 | 0.840408 | 8.85E-58 | -1.69E-46 |
| MS.gene056097 | MS.gene06998 | 0.872321 | 3.48E-67 | -1.69E-46 |
| MS.gene05615 | MS.gene06998 | 0.800212 | 1.60E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene06998 | 0.863638 | 2.16E-64 | -1.69E-46 |
| MS.gene056308 | MS.gene06998 | 0.819446 | 1.16E-52 | -1.69E-46 |
| MS.gene056390 | MS.gene06998 | 0.826676 | 2.38E-54 | -1.69E-46 |
| MS.gene056507 | MS.gene06998 | 0.805326 | 1.41E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene06998 | 0.845501 | 3.90E-59 | -1.69E-46 |
| MS.gene056699 | MS.gene06998 | 0.82201 | 2.98E-53 | -1.69E-46 |
| MS.gene056787 | MS.gene06998 | 0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene056831 | MS.gene06998 | 0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene056881 | MS.gene06998 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene06998 | 0.812498 | 4.11E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene06998 | 0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene06998 | 0.824597 | 7.41E-54 | -1.69E-46 |
| MS.gene057890 | MS.gene06998 | -0.814576 | 1.44E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene06998 | 0.840996 | 6.21E-58 | -1.69E-46 |
| MS.gene058054 | MS.gene06998 | 0.818725 | 1.69E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene06998 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene058261 | MS.gene06998 | 0.821876 | 3.20E-53 | -1.69E-46 |
| MS.gene058292 | MS.gene06998 | 0.826273 | 2.97E-54 | -1.69E-46 |
| MS.gene058638 | MS.gene06998 | 0.834646 | 2.66E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene06998 | 0.841002 | 6.19E-58 | -1.69E-46 |
| MS.gene058758 | MS.gene06998 | 0.851934 | 6.42E-61 | -1.69E-46 |
| MS.gene059007 | MS.gene06998 | 0.86158 | 9.28E-64 | -1.69E-46 |
| MS.gene059146 | MS.gene06998 | 0.856815 | 2.49E-62 | -1.69E-46 |
| MS.gene059170 | MS.gene06998 | 0.831015 | 2.12E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene06998 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene06998 | 0.831083 | 2.04E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene06998 | 0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene06998 | -0.811668 | 6.24E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene06998 | 0.85327 | 2.67E-61 | -1.69E-46 |
| MS.gene060259 | MS.gene06998 | 0.822094 | 2.85E-53 | -1.69E-46 |
| MS.gene060343 | MS.gene06998 | -0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene060563 | MS.gene06998 | 0.830459 | 2.90E-55 | -1.69E-46 |
| MS.gene060763 | MS.gene06998 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene06998 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene06998 | 0.849858 | 2.47E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene06998 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene06998 | 0.838939 | 2.13E-57 | -1.69E-46 |
| MS.gene061006 | MS.gene06998 | 0.850762 | 1.38E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene06998 | 0.87068 | 1.22E-66 | -1.69E-46 |
| MS.gene061160 | MS.gene06998 | 0.800773 | 1.23E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06998.t1 | MTR_7g108785 | 99.502 | 803 | 4 | 0 | 1 | 803 | 1 | 803 | 0.0 | 1646 |
| MS.gene06998.t1 | MTR_1g050505 | 46.790 | 810 | 392 | 9 | 5 | 803 | 4 | 785 | 0.0 | 727 |
| MS.gene06998.t1 | MTR_1g087380 | 45.466 | 805 | 388 | 9 | 10 | 801 | 25 | 791 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06998.t1 | AT4G02350 | 73.474 | 803 | 192 | 3 | 4 | 803 | 3 | 787 | 0.0 | 1204 |
| MS.gene06998.t1 | AT4G02350 | 73.474 | 803 | 192 | 3 | 4 | 803 | 3 | 787 | 0.0 | 1204 |
| MS.gene06998.t1 | AT3G56640 | 48.952 | 811 | 381 | 6 | 1 | 801 | 1 | 788 | 0.0 | 802 |
Find 167 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAGGTCATACTTTATT+TGG | 0.109713 | 7.2:-5194304 | MS.gene06998:CDS |
| TGCTATTGAAAGAGATTATT+TGG | 0.162393 | 7.2:-5195702 | MS.gene06998:CDS |
| TTTAATGTTAGTGCTATTAA+TGG | 0.215662 | 7.2:-5194153 | MS.gene06998:CDS |
| AGGTGTTGTTGGAGAGTTTC+CGG | 0.229440 | 7.2:+5196058 | None:intergenic |
| AAGGATTATGTGAGTCTATT+AGG | 0.237396 | 7.2:-5195014 | MS.gene06998:CDS |
| TATTAACGGTGGTGGAGTTT+TGG | 0.262401 | 7.2:-5195372 | MS.gene06998:CDS |
| TAAGTCTTCGTTGTTGGATA+TGG | 0.274201 | 7.2:+5196117 | None:intergenic |
| TAGTTAGTGATTCTGTTAAA+AGG | 0.278699 | 7.2:-5194176 | MS.gene06998:CDS |
| GATCCTTCGGATAGACTCTT+TGG | 0.321679 | 7.2:-5193904 | MS.gene06998:CDS |
| AGGATCGTGTGTTGAGGACT+GGG | 0.322616 | 7.2:-5195157 | MS.gene06998:CDS |
| AATGCAAATGGCAGCAAATA+TGG | 0.325108 | 7.2:-5194559 | MS.gene06998:CDS |
| TTGCTGCCATTTGCATTGCC+TGG | 0.326686 | 7.2:+5194565 | None:intergenic |
| AAGATCTTCTTCTCTTTGTC+TGG | 0.327695 | 7.2:+5195514 | None:intergenic |
| TAGGGATTGCATTTATGCTT+TGG | 0.345211 | 7.2:-5195447 | MS.gene06998:CDS |
| CGCCATGCAGCACAGCTGTC+GGG | 0.345406 | 7.2:-5194504 | MS.gene06998:CDS |
| TATCATATTCATCAAACGTT+AGG | 0.346618 | 7.2:-5195320 | MS.gene06998:CDS |
| CAATGATCGAGAATGTAAAT+TGG | 0.347245 | 7.2:-5194365 | MS.gene06998:CDS |
| TCATCAAACGTTAGGGTTAG+AGG | 0.352470 | 7.2:-5195312 | MS.gene06998:CDS |
| GGGTGGTTTGATATCGAAAA+TGG | 0.354218 | 7.2:-5195135 | MS.gene06998:CDS |
| TTGGAGAGTTTCCGGTTTGC+CGG | 0.354553 | 7.2:+5196066 | None:intergenic |
| TGATGTTATTTCTCATATAT+CGG | 0.354843 | 7.2:-5194217 | MS.gene06998:CDS |
| GAGGATCGTGTGTTGAGGAC+TGG | 0.368696 | 7.2:-5195158 | MS.gene06998:CDS |
| CATATATCGGAGATGATTGT+TGG | 0.373873 | 7.2:-5194204 | MS.gene06998:CDS |
| AACAGAGTAGACTCAGTGTT+AGG | 0.373918 | 7.2:-5195466 | MS.gene06998:CDS |
| GGAGTAACACTGCGTAGATT+TGG | 0.376618 | 7.2:-5194993 | MS.gene06998:CDS |
| TGAATCGTGTGTTCAGTTAA+CGG | 0.404241 | 7.2:-5195792 | MS.gene06998:CDS |
| GGAGAGGAGTTACAGTGCTT+TGG | 0.404523 | 7.2:-5193965 | MS.gene06998:CDS |
| AGCGAAAGCTTTGCGGATGA+AGG | 0.406340 | 7.2:+5196090 | None:intergenic |
| TGCAGGTTTCTTTGTGGTGG+AGG | 0.407238 | 7.2:-5195177 | MS.gene06998:CDS |
| ATCCGCAAAGCTTTCGCTTC+CGG | 0.409722 | 7.2:-5196085 | MS.gene06998:CDS |
| TGTCATAAATCTATCAACTT+TGG | 0.411955 | 7.2:+5194386 | None:intergenic |
| TCAGTTAGCTTCATGTCATA+TGG | 0.419251 | 7.2:-5194699 | MS.gene06998:CDS |
| CAGCATCCCCATCAAAGAAA+AGG | 0.424209 | 7.2:+5194079 | None:intergenic |
| GATAGACTCTTTGGAACCTT+TGG | 0.428904 | 7.2:-5193895 | MS.gene06998:CDS |
| GTTTGATGTGATTCAAGAAA+AGG | 0.429142 | 7.2:+5195215 | None:intergenic |
| TCCTCAGAGGAAATTGCCTC+CGG | 0.430156 | 7.2:+5194454 | None:intergenic |
| CGCGCCAACGCGCATCTCGC+AGG | 0.432660 | 7.2:-5195758 | MS.gene06998:CDS |
| CGTGTTGTGAGTCGCAATTT+AGG | 0.438828 | 7.2:-5195566 | MS.gene06998:CDS |
| AATTGCTGTTGTCAGATTGT+AGG | 0.440244 | 7.2:-5194914 | MS.gene06998:CDS |
| AAGAGATTATTTGGATAAAA+CGG | 0.441297 | 7.2:-5195693 | MS.gene06998:CDS |
| GCCGCGGAAGAGACACTGTC+GGG | 0.441627 | 7.2:-5194420 | MS.gene06998:CDS |
| AGCTTTCGCTTCCGGCAAAC+CGG | 0.445702 | 7.2:-5196077 | MS.gene06998:CDS |
| TGCTGCCATTTGCATTGCCT+GGG | 0.447640 | 7.2:+5194566 | None:intergenic |
| CGCACAATGCGACAACAATC+AGG | 0.447767 | 7.2:+5194738 | None:intergenic |
| GGGACCTAAGTCTTCGTTGT+TGG | 0.449779 | 7.2:+5196111 | None:intergenic |
| TGAACAAAGAGTTCGGTGAT+TGG | 0.452597 | 7.2:-5195601 | MS.gene06998:CDS |
| ATCATATTCATCAAACGTTA+GGG | 0.454776 | 7.2:-5195319 | MS.gene06998:CDS |
| AAATGGAAGTTGAGAATTTG+TGG | 0.455579 | 7.2:-5195118 | MS.gene06998:CDS |
| ACATCAAGCAGTGCATCAAT+CGG | 0.456004 | 7.2:+5194966 | None:intergenic |
| AGAAAAGTTGAAGGATCCTT+CGG | 0.457973 | 7.2:-5193917 | MS.gene06998:CDS |
| TACATATTCATTTCCACCAT+GGG | 0.460098 | 7.2:+5194326 | None:intergenic |
| AGAATCATTTGTTGAAACTC+AGG | 0.460669 | 7.2:-5194106 | MS.gene06998:CDS |
| GATTGCAGGTTTCTTTGTGG+TGG | 0.462887 | 7.2:-5195180 | MS.gene06998:CDS |
| CGAAGTGCTTGAGGTGTTGT+TGG | 0.462992 | 7.2:+5196047 | None:intergenic |
| ACAGATTGCAGGTTTCTTTG+TGG | 0.465392 | 7.2:-5195183 | MS.gene06998:CDS |
| TTCCGGCGCGGAGGTTTCGA+CGG | 0.466098 | 7.2:+5196202 | None:intergenic |
| AGAAAAGTGAACAAAGAGTT+CGG | 0.469635 | 7.2:-5195608 | MS.gene06998:CDS |
| TCTATGTAAGAACGAATCTC+TGG | 0.470870 | 7.2:+5195632 | None:intergenic |
| TCGCCATGCAGCACAGCTGT+CGG | 0.471066 | 7.2:-5194505 | MS.gene06998:CDS |
| CATTGTGCGGTCCTTCATTG+AGG | 0.474573 | 7.2:-5194724 | MS.gene06998:CDS |
| TGCCGGAAGCGAAAGCTTTG+CGG | 0.477397 | 7.2:+5196083 | None:intergenic |
| AAGCAGATAGCCGAGGCTAT+AGG | 0.478516 | 7.2:-5194891 | MS.gene06998:CDS |
| TGTCACCCAGGCAATGCAAA+TGG | 0.480916 | 7.2:-5194571 | MS.gene06998:CDS |
| TAACTCCTCTCCCTGATCAC+TGG | 0.488150 | 7.2:+5193976 | None:intergenic |
| CAAACGTTAGGGTTAGAGGA+TGG | 0.491132 | 7.2:-5195308 | MS.gene06998:CDS |
| GCCATGCAGCACAGCTGTCG+GGG | 0.491876 | 7.2:-5194503 | MS.gene06998:CDS |
| ACTTGCTGAGGCGAGGCAAA+TGG | 0.497261 | 7.2:-5194040 | MS.gene06998:CDS |
| TACAGTAACGGTAATATTAA+CGG | 0.498017 | 7.2:-5195386 | MS.gene06998:CDS |
| TTCGTTGTTGGATATGGCGG+TGG | 0.500353 | 7.2:+5196123 | None:intergenic |
| GATGAAAACGGTGCCAGATA+AGG | 0.505394 | 7.2:+5194768 | None:intergenic |
| AACGGTAATATTAACGGTGG+TGG | 0.505734 | 7.2:-5195380 | MS.gene06998:CDS |
| GGATTGCATTTATGCTTTGG+AGG | 0.507317 | 7.2:-5195444 | MS.gene06998:CDS |
| ACAGAGTAGACTCAGTGTTA+GGG | 0.507673 | 7.2:-5195465 | MS.gene06998:CDS |
| AAACGTTAGGGTTAGAGGAT+GGG | 0.510724 | 7.2:-5195307 | MS.gene06998:CDS |
| ATATATCGGAGATGATTGTT+GGG | 0.513885 | 7.2:-5194203 | MS.gene06998:CDS |
| CGCAGGTGATAACTTCTACA+TGG | 0.515565 | 7.2:-5195741 | MS.gene06998:CDS |
| TTGGAACCTTTGGTAGTCGA+GGG | 0.517045 | 7.2:-5193885 | MS.gene06998:CDS |
| AATGGAAGTTGAGAATTTGT+GGG | 0.517574 | 7.2:-5195117 | MS.gene06998:CDS |
| ACGAGCAACGGACTGAAGCT+TGG | 0.517677 | 7.2:+5195892 | None:intergenic |
| GATTGTTTCAGAAAAGTTGA+AGG | 0.519962 | 7.2:-5193926 | MS.gene06998:CDS |
| CGACGGCGAGGATGAAGTCT+TGG | 0.520067 | 7.2:+5195978 | None:intergenic |
| TCCGGCGCGGAGGTTTCGAC+GGG | 0.521076 | 7.2:+5196203 | None:intergenic |
| GTTAAAGCTTATTAATACCT+CGG | 0.522892 | 7.2:-5194601 | MS.gene06998:CDS |
| CAGGCAAACGTCGATGACTC+TGG | 0.524714 | 7.2:-5196172 | MS.gene06998:CDS |
| CTTATTAATACCTCGGTTAG+CGG | 0.525004 | 7.2:-5194594 | MS.gene06998:CDS |
| GCTAACTGAATCCTCAATGA+AGG | 0.526202 | 7.2:+5194713 | None:intergenic |
| AGCATCCCCATCAAAGAAAA+GGG | 0.526318 | 7.2:+5194080 | None:intergenic |
| TTTGCTAGTAAGCAACCATC+CGG | 0.528679 | 7.2:-5194013 | MS.gene06998:CDS |
| CTGAAGCTTGGAATTCGAAT+CGG | 0.529778 | 7.2:+5195904 | None:intergenic |
| CATCAAGCAGTGCATCAATC+GGG | 0.533991 | 7.2:+5194967 | None:intergenic |
| GTCTTCGTTGTTGGATATGG+CGG | 0.534503 | 7.2:+5196120 | None:intergenic |
| TCAGGCACCGTGGATGAAAA+CGG | 0.535836 | 7.2:+5194756 | None:intergenic |
| CAAAGAGTTCGGTGATTGGT+TGG | 0.537392 | 7.2:-5195597 | MS.gene06998:CDS |
| AATTTAGGTCAATTAGCGAT+TGG | 0.537831 | 7.2:-5195551 | MS.gene06998:CDS |
| TTGGAGGAAGAAGATGAAGA+TGG | 0.538377 | 7.2:-5195428 | MS.gene06998:CDS |
| TCCGCGCCGGAAAATCCCTC+AGG | 0.538744 | 7.2:-5196191 | MS.gene06998:CDS |
| GATGGAATGGCTTCCGATGA+CGG | 0.539972 | 7.2:-5195410 | MS.gene06998:CDS |
| CAAAATGTGTTCTGTGTTGG+AGG | 0.540499 | 7.2:-5195081 | MS.gene06998:CDS |
| TTTGGAACCTTTGGTAGTCG+AGG | 0.543156 | 7.2:-5193886 | MS.gene06998:CDS |
| GGAAGAAGATGAAGATGGAA+TGG | 0.544011 | 7.2:-5195423 | MS.gene06998:CDS |
| ACCGTTACTGTAACCGTCAT+CGG | 0.545527 | 7.2:+5195397 | None:intergenic |
| TCGGAAGCTTCAGTTGACTT+CGG | 0.554832 | 7.2:-5195261 | MS.gene06998:CDS |
| ATATCCAACAACGAAGACTT+AGG | 0.556143 | 7.2:-5196115 | MS.gene06998:CDS |
| TAGCAAAATGTGTTCTGTGT+TGG | 0.557044 | 7.2:-5195084 | MS.gene06998:CDS |
| GGTGCCAGATAAGGAAAAGC+AGG | 0.559764 | 7.2:+5194777 | None:intergenic |
| CTTCTTTCTACCATTCTCAA+AGG | 0.561409 | 7.2:+5194477 | None:intergenic |
| AACACCTCAAGCACTTCGCT+CGG | 0.562004 | 7.2:-5196042 | MS.gene06998:CDS |
| ACTGGATTCAGAAAATTCTC+CGG | 0.564105 | 7.2:+5193994 | None:intergenic |
| TAGACCGAGCGAAGTGCTTG+AGG | 0.564698 | 7.2:+5196038 | None:intergenic |
| GCGAAAGCTTTGCGGATGAA+GGG | 0.572026 | 7.2:+5196091 | None:intergenic |
| ACACGATTCAACTGAATCGA+TGG | 0.576219 | 7.2:+5195805 | None:intergenic |
| TGAGAATGGTAGAAAGAAGC+CGG | 0.576442 | 7.2:-5194473 | MS.gene06998:CDS |
| CCTTTGGTAGTCGAGGGTCC+AGG | 0.579526 | 7.2:-5193879 | MS.gene06998:CDS |
| TTAGCTTCATGTCATATGGC+GGG | 0.580285 | 7.2:-5194695 | MS.gene06998:CDS |
| AGTCATCGACGTTTGCCTGA+GGG | 0.580438 | 7.2:+5196176 | None:intergenic |
| TGCTTTGGACCACAAGAAAG+TGG | 0.586493 | 7.2:-5193950 | MS.gene06998:CDS |
| TCCGATGACGGTTACAGTAA+CGG | 0.587710 | 7.2:-5195398 | MS.gene06998:CDS |
| GGATCGTGTGTTGAGGACTG+GGG | 0.587768 | 7.2:-5195156 | MS.gene06998:CDS |
| TTTATCACCGCCTATAGCCT+CGG | 0.587962 | 7.2:+5194881 | None:intergenic |
| GAATCGAGTGATGTTAGAAG+AGG | 0.588777 | 7.2:+5195869 | None:intergenic |
| AAACAATCACCACTTTCTTG+TGG | 0.590764 | 7.2:+5193941 | None:intergenic |
| CTCGGTTAGCGGTGTCACCC+AGG | 0.592004 | 7.2:-5194583 | MS.gene06998:CDS |
| ATCACCTGCGAGATGCGCGT+TGG | 0.592469 | 7.2:+5195754 | None:intergenic |
| CATACTTTATTTGGAAACTG+TGG | 0.595017 | 7.2:-5194295 | MS.gene06998:CDS |
| CCTGGACCCTCGACTACCAA+AGG | 0.602489 | 7.2:+5193879 | None:intergenic |
| GATTCAGAAAATTCTCCGGA+TGG | 0.603548 | 7.2:+5193998 | None:intergenic |
| TGAATCCAGTGATCAGGGAG+AGG | 0.605726 | 7.2:-5193981 | MS.gene06998:CDS |
| TGGAAATGAATATGTAAATG+AGG | 0.606507 | 7.2:-5194319 | MS.gene06998:CDS |
| CCATGCAGCACAGCTGTCGG+GGG | 0.607096 | 7.2:-5194502 | MS.gene06998:CDS |
| TGGTGGAGGATCGTGTGTTG+AGG | 0.609284 | 7.2:-5195163 | MS.gene06998:CDS |
| ACCCGTCGAAACCTCCGCGC+CGG | 0.610351 | 7.2:-5196204 | MS.gene06998:CDS |
| GAGTCATCGACGTTTGCCTG+AGG | 0.611342 | 7.2:+5196175 | None:intergenic |
| TTACATATTCATTTCCACCA+TGG | 0.614566 | 7.2:+5194325 | None:intergenic |
| GTTAGCTTCATGTCATATGG+CGG | 0.614887 | 7.2:-5194696 | MS.gene06998:CDS |
| GATCGTGTGTTGAGGACTGG+GGG | 0.614951 | 7.2:-5195155 | MS.gene06998:CDS |
| GAGGAAAGCTCGTGATGCCG+CGG | 0.617856 | 7.2:-5194436 | MS.gene06998:CDS |
| CTGATTGTTGTCGCATTGTG+CGG | 0.619126 | 7.2:-5194737 | MS.gene06998:CDS |
| CCCCGACAGTGTCTCTTCCG+CGG | 0.622337 | 7.2:+5194419 | None:intergenic |
| CAACGTCGGAGAGAAGAGAT+CGG | 0.626182 | 7.2:+5195948 | None:intergenic |
| AATCAGCACTTGCTGAGGCG+AGG | 0.627332 | 7.2:-5194047 | MS.gene06998:CDS |
| TGGCGGTGGAGAGAAGAAGC+TGG | 0.628722 | 7.2:+5196137 | None:intergenic |
| TATTCATTTCCACCATGGGG+CGG | 0.631729 | 7.2:+5194330 | None:intergenic |
| TGTTAGAAGAGGACGAGCAA+CGG | 0.632382 | 7.2:+5195880 | None:intergenic |
| ATCGGAGATCATCGACGGCG+AGG | 0.636224 | 7.2:+5195966 | None:intergenic |
| ATGTCTGATGATCCGCCCCA+TGG | 0.637172 | 7.2:-5194342 | MS.gene06998:CDS |
| CTAAATTGCGACTCACAACA+CGG | 0.643892 | 7.2:+5195567 | None:intergenic |
| GCATCACGAGCTTTCCTCAG+AGG | 0.644669 | 7.2:+5194441 | None:intergenic |
| CTACATGGCGTTGAAGTGTG+TGG | 0.648825 | 7.2:-5195726 | MS.gene06998:CDS |
| AATCAAACAGCGTCAAGCGG+AGG | 0.649303 | 7.2:-5195489 | MS.gene06998:CDS |
| ATATGATAAGCTCTATACAA+AGG | 0.652147 | 7.2:+5195335 | None:intergenic |
| AAGAGATCGGAGATCATCGA+CGG | 0.653067 | 7.2:+5195961 | None:intergenic |
| TGCCGCGGAAGAGACACTGT+CGG | 0.659355 | 7.2:-5194421 | MS.gene06998:CDS |
| TTGTAGGAAGCAGATAGCCG+AGG | 0.659817 | 7.2:-5194898 | MS.gene06998:CDS |
| GTTCCAAAGAGTCTATCCGA+AGG | 0.663129 | 7.2:+5193901 | None:intergenic |
| TAGAATCAAACAGCGTCAAG+CGG | 0.663703 | 7.2:-5195492 | MS.gene06998:CDS |
| GTTCAAATCAGCACTTGCTG+AGG | 0.663771 | 7.2:-5194052 | MS.gene06998:CDS |
| ACATATTCATTTCCACCATG+GGG | 0.666293 | 7.2:+5194327 | None:intergenic |
| GCCGGAGGCAATTTCCTCTG+AGG | 0.669453 | 7.2:-5194455 | MS.gene06998:CDS |
| TCTGATGATCCGCCCCATGG+TGG | 0.676717 | 7.2:-5194339 | MS.gene06998:CDS |
| CTGGGTGACACCGCTAACCG+AGG | 0.681870 | 7.2:+5194584 | None:intergenic |
| ATTCAACTGAATCGATGGCG+AGG | 0.686916 | 7.2:+5195810 | None:intergenic |
| CCGCGGAAGAGACACTGTCG+GGG | 0.687041 | 7.2:-5194419 | MS.gene06998:CDS |
| CAGATAGCCGAGGCTATAGG+CGG | 0.707779 | 7.2:-5194888 | MS.gene06998:CDS |
| GCGACAACAATCAGGCACCG+TGG | 0.728764 | 7.2:+5194746 | None:intergenic |
| TGACTTGAGAGATTCAACGT+CGG | 0.737812 | 7.2:+5195934 | None:intergenic |
| AGTAACGGTAATATTAACGG+TGG | 0.743532 | 7.2:-5195383 | MS.gene06998:CDS |
| GAATGGTAGAAAGAAGCCGG+AGG | 0.762761 | 7.2:-5194470 | MS.gene06998:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCATCTTTTGTTAATTA+AGG | - | chr7.2:5194994-5195013 | MS.gene06998:CDS | 15.0% |
| !! | AAGAGATTATTTGGATAAAA+CGG | - | chr7.2:5194334-5194353 | MS.gene06998:CDS | 20.0% |
| !! | ATACATTGATAAAAAGACTA+AGG | - | chr7.2:5196196-5196215 | MS.gene06998:CDS | 20.0% |
| !! | TACATTGATAAAAAGACTAA+GGG | - | chr7.2:5196197-5196216 | MS.gene06998:CDS | 20.0% |
| !!! | TGATGTTATTTCTCATATAT+CGG | - | chr7.2:5195810-5195829 | MS.gene06998:CDS | 20.0% |
| !!! | TTTAATGTTAGTGCTATTAA+TGG | - | chr7.2:5195874-5195893 | MS.gene06998:CDS | 20.0% |
| ! | AAATGAGGTCATACTTTATT+TGG | - | chr7.2:5195723-5195742 | MS.gene06998:CDS | 25.0% |
| ! | ATATGATAAGCTCTATACAA+AGG | + | chr7.2:5194695-5194714 | None:intergenic | 25.0% |
| ! | ATCATATTCATCAAACGTTA+GGG | - | chr7.2:5194708-5194727 | MS.gene06998:CDS | 25.0% |
| ! | GTTAAAGCTTATTAATACCT+CGG | - | chr7.2:5195426-5195445 | MS.gene06998:CDS | 25.0% |
| ! | TACAGTAACGGTAATATTAA+CGG | - | chr7.2:5194641-5194660 | MS.gene06998:CDS | 25.0% |
| ! | TAGTTAGTGATTCTGTTAAA+AGG | - | chr7.2:5195851-5195870 | MS.gene06998:CDS | 25.0% |
| ! | TATCATATTCATCAAACGTT+AGG | - | chr7.2:5194707-5194726 | MS.gene06998:CDS | 25.0% |
| ! | TGCTATTGAAAGAGATTATT+TGG | - | chr7.2:5194325-5194344 | MS.gene06998:CDS | 25.0% |
| ! | TGGAAATGAATATGTAAATG+AGG | - | chr7.2:5195708-5195727 | MS.gene06998:CDS | 25.0% |
| ! | TGTCATAAATCTATCAACTT+TGG | + | chr7.2:5195644-5195663 | None:intergenic | 25.0% |
| !! | TTCTTTTCAGATTCAAACAT+CGG | - | chr7.2:5195219-5195238 | MS.gene06998:CDS | 25.0% |
| !!! | AGCAGTATTATTTTGAGAAT+CGG | - | chr7.2:5194747-5194766 | MS.gene06998:CDS | 25.0% |
| AAATGGAAGTTGAGAATTTG+TGG | - | chr7.2:5194909-5194928 | MS.gene06998:CDS | 30.0% | |
| AAGGATTATGTGAGTCTATT+AGG | - | chr7.2:5195013-5195032 | MS.gene06998:CDS | 30.0% | |
| AATGGAAGTTGAGAATTTGT+GGG | - | chr7.2:5194910-5194929 | MS.gene06998:CDS | 30.0% | |
| AATTTAGGTCAATTAGCGAT+TGG | - | chr7.2:5194476-5194495 | MS.gene06998:CDS | 30.0% | |
| AGAAAAGTGAACAAAGAGTT+CGG | - | chr7.2:5194419-5194438 | MS.gene06998:CDS | 30.0% | |
| ATATATCGGAGATGATTGTT+GGG | - | chr7.2:5195824-5195843 | MS.gene06998:CDS | 30.0% | |
| CAATGATCGAGAATGTAAAT+TGG | - | chr7.2:5195662-5195681 | MS.gene06998:CDS | 30.0% | |
| GAATCCAAAAAAGAAATCAC+TGG | - | chr7.2:5196173-5196192 | MS.gene06998:CDS | 30.0% | |
| GATTGTTTCAGAAAAGTTGA+AGG | - | chr7.2:5196101-5196120 | MS.gene06998:CDS | 30.0% | |
| GTTTGATGTGATTCAAGAAA+AGG | + | chr7.2:5194815-5194834 | None:intergenic | 30.0% | |
| TACATATTCATTTCCACCAT+GGG | + | chr7.2:5195704-5195723 | None:intergenic | 30.0% | |
| TTACATATTCATTTCCACCA+TGG | + | chr7.2:5195705-5195724 | None:intergenic | 30.0% | |
| ! | AGAATCATTTGTTGAAACTC+AGG | - | chr7.2:5195921-5195940 | MS.gene06998:CDS | 30.0% |
| ! | CATACTTTATTTGGAAACTG+TGG | - | chr7.2:5195732-5195751 | MS.gene06998:CDS | 30.0% |
| ! | CATCATGTAGAACTCTTTTA+TGG | + | chr7.2:5195795-5195814 | None:intergenic | 30.0% |
| !! | TGATGTTTTAAGCAAGCATA+GGG | - | chr7.2:5195078-5195097 | MS.gene06998:CDS | 30.0% |
| !! | TTGATGTTTTAAGCAAGCAT+AGG | - | chr7.2:5195077-5195096 | MS.gene06998:CDS | 30.0% |
| !! | TTTAGATAAGCTTTTGAGTG+AGG | - | chr7.2:5195387-5195406 | MS.gene06998:CDS | 30.0% |
| !!! | GTATCCAGTGATTTCTTTTT+TGG | + | chr7.2:5196180-5196199 | None:intergenic | 30.0% |
| AAACAATCACCACTTTCTTG+TGG | + | chr7.2:5196089-5196108 | None:intergenic | 35.0% | |
| AAGATCTTCTTCTCTTTGTC+TGG | + | chr7.2:5194516-5194535 | None:intergenic | 35.0% | |
| AATGCAAATGGCAGCAAATA+TGG | - | chr7.2:5195468-5195487 | MS.gene06998:CDS | 35.0% | |
| ACATATTCATTTCCACCATG+GGG | + | chr7.2:5195703-5195722 | None:intergenic | 35.0% | |
| ACTGGATTCAGAAAATTCTC+CGG | + | chr7.2:5196036-5196055 | None:intergenic | 35.0% | |
| AGAAAAGTTGAAGGATCCTT+CGG | - | chr7.2:5196110-5196129 | MS.gene06998:CDS | 35.0% | |
| AGTAACGGTAATATTAACGG+TGG | - | chr7.2:5194644-5194663 | MS.gene06998:CDS | 35.0% | |
| ATATCCAACAACGAAGACTT+AGG | - | chr7.2:5193912-5193931 | MS.gene06998:CDS | 35.0% | |
| CATATATCGGAGATGATTGT+TGG | - | chr7.2:5195823-5195842 | MS.gene06998:CDS | 35.0% | |
| CTTATTAATACCTCGGTTAG+CGG | - | chr7.2:5195433-5195452 | MS.gene06998:CDS | 35.0% | |
| CTTCTTTCTACCATTCTCAA+AGG | + | chr7.2:5195553-5195572 | None:intergenic | 35.0% | |
| TAAGTCTTCGTTGTTGGATA+TGG | + | chr7.2:5193913-5193932 | None:intergenic | 35.0% | |
| TAGCAAAATGTGTTCTGTGT+TGG | - | chr7.2:5194943-5194962 | MS.gene06998:CDS | 35.0% | |
| TAGGGATTGCATTTATGCTT+TGG | - | chr7.2:5194580-5194599 | MS.gene06998:CDS | 35.0% | |
| TCTATGTAAGAACGAATCTC+TGG | + | chr7.2:5194398-5194417 | None:intergenic | 35.0% | |
| TGAATCGTGTGTTCAGTTAA+CGG | - | chr7.2:5194235-5194254 | MS.gene06998:CDS | 35.0% | |
| ! | AATTGCTGTTGTCAGATTGT+AGG | - | chr7.2:5195113-5195132 | MS.gene06998:CDS | 35.0% |
| ! | ACTCTTTTATGGACTTGAGT+TGG | + | chr7.2:5195784-5195803 | None:intergenic | 35.0% |
| ! | ATTTTCTGAATCCAGTGATC+AGG | - | chr7.2:5196040-5196059 | MS.gene06998:CDS | 35.0% |
| ! | TCAGTTAGCTTCATGTCATA+TGG | - | chr7.2:5195328-5195347 | MS.gene06998:CDS | 35.0% |
| ! | TTTTCTGAATCCAGTGATCA+GGG | - | chr7.2:5196041-5196060 | MS.gene06998:CDS | 35.0% |
| !!! | TTTCTTTTTTGGATTCTGCC+TGG | + | chr7.2:5196169-5196188 | None:intergenic | 35.0% |
| AAACGTTAGGGTTAGAGGAT+GGG | - | chr7.2:5194720-5194739 | MS.gene06998:CDS | 40.0% | |
| AACAGAGTAGACTCAGTGTT+AGG | - | chr7.2:5194561-5194580 | MS.gene06998:CDS | 40.0% | |
| AACGGTAATATTAACGGTGG+TGG | - | chr7.2:5194647-5194666 | MS.gene06998:CDS | 40.0% | |
| ACACGATTCAACTGAATCGA+TGG | + | chr7.2:5194225-5194244 | None:intergenic | 40.0% | |
| ACAGAGTAGACTCAGTGTTA+GGG | - | chr7.2:5194562-5194581 | MS.gene06998:CDS | 40.0% | |
| ACAGATTGCAGGTTTCTTTG+TGG | - | chr7.2:5194844-5194863 | MS.gene06998:CDS | 40.0% | |
| ACATCAAGCAGTGCATCAAT+CGG | + | chr7.2:5195064-5195083 | None:intergenic | 40.0% | |
| ACCTGCAATCTGTGCAAAAA+AGG | + | chr7.2:5194837-5194856 | None:intergenic | 40.0% | |
| AGCATCCCCATCAAAGAAAA+GGG | + | chr7.2:5195950-5195969 | None:intergenic | 40.0% | |
| CAAAATGTGTTCTGTGTTGG+AGG | - | chr7.2:5194946-5194965 | MS.gene06998:CDS | 40.0% | |
| CTAAATTGCGACTCACAACA+CGG | + | chr7.2:5194463-5194482 | None:intergenic | 40.0% | |
| CTGAAGCTTGGAATTCGAAT+CGG | + | chr7.2:5194126-5194145 | None:intergenic | 40.0% | |
| GAATCGAGTGATGTTAGAAG+AGG | + | chr7.2:5194161-5194180 | None:intergenic | 40.0% | |
| GATTCAGAAAATTCTCCGGA+TGG | + | chr7.2:5196032-5196051 | None:intergenic | 40.0% | |
| GCTAACTGAATCCTCAATGA+AGG | + | chr7.2:5195317-5195336 | None:intergenic | 40.0% | |
| GGAAGAAGATGAAGATGGAA+TGG | - | chr7.2:5194604-5194623 | MS.gene06998:CDS | 40.0% | |
| GGATTGCATTTATGCTTTGG+AGG | - | chr7.2:5194583-5194602 | MS.gene06998:CDS | 40.0% | |
| GGGTGGTTTGATATCGAAAA+TGG | - | chr7.2:5194892-5194911 | MS.gene06998:CDS | 40.0% | |
| TAGAATCAAACAGCGTCAAG+CGG | - | chr7.2:5194535-5194554 | MS.gene06998:CDS | 40.0% | |
| TCATCAAACGTTAGGGTTAG+AGG | - | chr7.2:5194715-5194734 | MS.gene06998:CDS | 40.0% | |
| TGACTTGAGAGATTCAACGT+CGG | + | chr7.2:5194096-5194115 | None:intergenic | 40.0% | |
| TGAGAATGGTAGAAAGAAGC+CGG | - | chr7.2:5195554-5195573 | MS.gene06998:CDS | 40.0% | |
| TTAGCTTCATGTCATATGGC+GGG | - | chr7.2:5195332-5195351 | MS.gene06998:CDS | 40.0% | |
| TTGGAGGAAGAAGATGAAGA+TGG | - | chr7.2:5194599-5194618 | MS.gene06998:CDS | 40.0% | |
| TTTGCTAGTAAGCAACCATC+CGG | - | chr7.2:5196014-5196033 | MS.gene06998:CDS | 40.0% | |
| ! | AGGCAACCCTTTTCTTTGAT+GGG | - | chr7.2:5195941-5195960 | MS.gene06998:CDS | 40.0% |
| ! | GTTAGCTTCATGTCATATGG+CGG | - | chr7.2:5195331-5195350 | MS.gene06998:CDS | 40.0% |
| ! | TGAACAAAGAGTTCGGTGAT+TGG | - | chr7.2:5194426-5194445 | MS.gene06998:CDS | 40.0% |
| !! | CATACCTGCTTTTCCTTATC+TGG | - | chr7.2:5195246-5195265 | MS.gene06998:CDS | 40.0% |
| !! | GATAGACTCTTTGGAACCTT+TGG | - | chr7.2:5196132-5196151 | MS.gene06998:CDS | 40.0% |
| !! | TCAGTTGACTTCGGATTTTC+AGG | - | chr7.2:5194775-5194794 | MS.gene06998:CDS | 40.0% |
| !!! | ACCTTTTTTGCACAGATTGC+AGG | - | chr7.2:5194833-5194852 | MS.gene06998:CDS | 40.0% |
| !!! | ATTAACGGTGGTGGAGTTTT+GGG | - | chr7.2:5194656-5194675 | MS.gene06998:CDS | 40.0% |
| !!! | TATTAACGGTGGTGGAGTTT+TGG | - | chr7.2:5194655-5194674 | MS.gene06998:CDS | 40.0% |
| AAGAGATCGGAGATCATCGA+CGG | + | chr7.2:5194069-5194088 | None:intergenic | 45.0% | |
| ACCGTTACTGTAACCGTCAT+CGG | + | chr7.2:5194633-5194652 | None:intergenic | 45.0% | |
| ATTCAACTGAATCGATGGCG+AGG | + | chr7.2:5194220-5194239 | None:intergenic | 45.0% | |
| CAAACGTTAGGGTTAGAGGA+TGG | - | chr7.2:5194719-5194738 | MS.gene06998:CDS | 45.0% | |
| CAGCATCCCCATCAAAGAAA+AGG | + | chr7.2:5195951-5195970 | None:intergenic | 45.0% | |
| CATCAAGCAGTGCATCAATC+GGG | + | chr7.2:5195063-5195082 | None:intergenic | 45.0% | |
| CGCAGGTGATAACTTCTACA+TGG | - | chr7.2:5194286-5194305 | MS.gene06998:CDS | 45.0% | |
| CGTGTTGTGAGTCGCAATTT+AGG | - | chr7.2:5194461-5194480 | MS.gene06998:CDS | 45.0% | |
| CTGATTGTTGTCGCATTGTG+CGG | - | chr7.2:5195290-5195309 | MS.gene06998:CDS | 45.0% | |
| GATCCTTCGGATAGACTCTT+TGG | - | chr7.2:5196123-5196142 | MS.gene06998:CDS | 45.0% | |
| GATTGCAGGTTTCTTTGTGG+TGG | - | chr7.2:5194847-5194866 | MS.gene06998:CDS | 45.0% | |
| GGAGTAACACTGCGTAGATT+TGG | - | chr7.2:5195034-5195053 | MS.gene06998:CDS | 45.0% | |
| GTCTTCGTTGTTGGATATGG+CGG | + | chr7.2:5193910-5193929 | None:intergenic | 45.0% | |
| GTTCCAAAGAGTCTATCCGA+AGG | + | chr7.2:5196129-5196148 | None:intergenic | 45.0% | |
| TATTCATTTCCACCATGGGG+CGG | + | chr7.2:5195700-5195719 | None:intergenic | 45.0% | |
| TGTTAGAAGAGGACGAGCAA+CGG | + | chr7.2:5194150-5194169 | None:intergenic | 45.0% | |
| TTTATCACCGCCTATAGCCT+CGG | + | chr7.2:5195149-5195168 | None:intergenic | 45.0% | |
| ! | CAAAGAGTTCGGTGATTGGT+TGG | - | chr7.2:5194430-5194449 | MS.gene06998:CDS | 45.0% |
| ! | CAGGCAACCCTTTTCTTTGA+TGG | - | chr7.2:5195940-5195959 | MS.gene06998:CDS | 45.0% |
| ! | GATGAAAACGGTGCCAGATA+AGG | + | chr7.2:5195262-5195281 | None:intergenic | 45.0% |
| ! | GGCAACCCTTTTCTTTGATG+GGG | - | chr7.2:5195942-5195961 | MS.gene06998:CDS | 45.0% |
| ! | GTTCAAATCAGCACTTGCTG+AGG | - | chr7.2:5195975-5195994 | MS.gene06998:CDS | 45.0% |
| ! | TCCGATGACGGTTACAGTAA+CGG | - | chr7.2:5194629-5194648 | MS.gene06998:CDS | 45.0% |
| ! | TCGGAAGCTTCAGTTGACTT+CGG | - | chr7.2:5194766-5194785 | MS.gene06998:CDS | 45.0% |
| ! | TGCTTTGGACCACAAGAAAG+TGG | - | chr7.2:5196077-5196096 | MS.gene06998:CDS | 45.0% |
| ! | TTGGAACCTTTGGTAGTCGA+GGG | - | chr7.2:5196142-5196161 | MS.gene06998:CDS | 45.0% |
| ! | TTTGGAACCTTTGGTAGTCG+AGG | - | chr7.2:5196141-5196160 | MS.gene06998:CDS | 45.0% |
| !! | AGGTGTTGTTGGAGAGTTTC+CGG | + | chr7.2:5193972-5193991 | None:intergenic | 45.0% |
| AACACCTCAAGCACTTCGCT+CGG | - | chr7.2:5193985-5194004 | MS.gene06998:CDS | 50.0% | |
| AAGCAGATAGCCGAGGCTAT+AGG | - | chr7.2:5195136-5195155 | MS.gene06998:CDS | 50.0% | |
| AATCAAACAGCGTCAAGCGG+AGG | - | chr7.2:5194538-5194557 | MS.gene06998:CDS | 50.0% | |
| AGCGAAAGCTTTGCGGATGA+AGG | + | chr7.2:5193940-5193959 | None:intergenic | 50.0% | |
| AGGATCGTGTGTTGAGGACT+GGG | - | chr7.2:5194870-5194889 | MS.gene06998:CDS | 50.0% | |
| AGTCATCGACGTTTGCCTGA+GGG | + | chr7.2:5193854-5193873 | None:intergenic | 50.0% | |
| ATCCGCAAAGCTTTCGCTTC+CGG | - | chr7.2:5193942-5193961 | MS.gene06998:CDS | 50.0% | |
| CAACGTCGGAGAGAAGAGAT+CGG | + | chr7.2:5194082-5194101 | None:intergenic | 50.0% | |
| CATTGTGCGGTCCTTCATTG+AGG | - | chr7.2:5195303-5195322 | MS.gene06998:CDS | 50.0% | |
| CGCACAATGCGACAACAATC+AGG | + | chr7.2:5195292-5195311 | None:intergenic | 50.0% | |
| GAATGGTAGAAAGAAGCCGG+AGG | - | chr7.2:5195557-5195576 | MS.gene06998:CDS | 50.0% | |
| GATGGAATGGCTTCCGATGA+CGG | - | chr7.2:5194617-5194636 | MS.gene06998:CDS | 50.0% | |
| GCGAAAGCTTTGCGGATGAA+GGG | + | chr7.2:5193939-5193958 | None:intergenic | 50.0% | |
| GGAGAGGAGTTACAGTGCTT+TGG | - | chr7.2:5196062-5196081 | MS.gene06998:CDS | 50.0% | |
| GGGACCTAAGTCTTCGTTGT+TGG | + | chr7.2:5193919-5193938 | None:intergenic | 50.0% | |
| GGTGCCAGATAAGGAAAAGC+AGG | + | chr7.2:5195253-5195272 | None:intergenic | 50.0% | |
| TAACTCCTCTCCCTGATCAC+TGG | + | chr7.2:5196054-5196073 | None:intergenic | 50.0% | |
| TCCTCAGAGGAAATTGCCTC+CGG | + | chr7.2:5195576-5195595 | None:intergenic | 50.0% | |
| TGAATCCAGTGATCAGGGAG+AGG | - | chr7.2:5196046-5196065 | MS.gene06998:CDS | 50.0% | |
| TGCAGGTTTCTTTGTGGTGG+AGG | - | chr7.2:5194850-5194869 | MS.gene06998:CDS | 50.0% | |
| TGTCACCCAGGCAATGCAAA+TGG | - | chr7.2:5195456-5195475 | MS.gene06998:CDS | 50.0% | |
| TTCGTTGTTGGATATGGCGG+TGG | + | chr7.2:5193907-5193926 | None:intergenic | 50.0% | |
| TTGTAGGAAGCAGATAGCCG+AGG | - | chr7.2:5195129-5195148 | MS.gene06998:CDS | 50.0% | |
| ! | CGTTTGCCTGAGGGATTTTC+CGG | + | chr7.2:5193845-5193864 | None:intergenic | 50.0% |
| ! | CTACATGGCGTTGAAGTGTG+TGG | - | chr7.2:5194301-5194320 | MS.gene06998:CDS | 50.0% |
| ! | TCAGGCACCGTGGATGAAAA+CGG | + | chr7.2:5195274-5195293 | None:intergenic | 50.0% |
| ! | TCTGGCACCGTTTTCATCCA+CGG | - | chr7.2:5195264-5195283 | MS.gene06998:CDS | 50.0% |
| ! | TGCTGCCATTTGCATTGCCT+GGG | + | chr7.2:5195464-5195483 | None:intergenic | 50.0% |
| ! | TTGCTGCCATTTGCATTGCC+TGG | + | chr7.2:5195465-5195484 | None:intergenic | 50.0% |
| ! | TTGGAGAGTTTCCGGTTTGC+CGG | + | chr7.2:5193964-5193983 | None:intergenic | 50.0% |
| !! | CGAAGTGCTTGAGGTGTTGT+TGG | + | chr7.2:5193983-5194002 | None:intergenic | 50.0% |
| AGCTTTCGCTTCCGGCAAAC+CGG | - | chr7.2:5193950-5193969 | MS.gene06998:CDS | 55.0% | |
| ATGTCTGATGATCCGCCCCA+TGG | - | chr7.2:5195685-5195704 | MS.gene06998:CDS | 55.0% | |
| CAGATAGCCGAGGCTATAGG+CGG | - | chr7.2:5195139-5195158 | MS.gene06998:CDS | 55.0% | |
| CAGGCAAACGTCGATGACTC+TGG | - | chr7.2:5193855-5193874 | MS.gene06998:CDS | 55.0% | |
| GAGGATCGTGTGTTGAGGAC+TGG | - | chr7.2:5194869-5194888 | MS.gene06998:CDS | 55.0% | |
| GAGTCATCGACGTTTGCCTG+AGG | + | chr7.2:5193855-5193874 | None:intergenic | 55.0% | |
| GATCGTGTGTTGAGGACTGG+GGG | - | chr7.2:5194872-5194891 | MS.gene06998:CDS | 55.0% | |
| GCATCACGAGCTTTCCTCAG+AGG | + | chr7.2:5195589-5195608 | None:intergenic | 55.0% | |
| GGATCGTGTGTTGAGGACTG+GGG | - | chr7.2:5194871-5194890 | MS.gene06998:CDS | 55.0% | |
| TGCCGGAAGCGAAAGCTTTG+CGG | + | chr7.2:5193947-5193966 | None:intergenic | 55.0% | |
| TGGTGGAGGATCGTGTGTTG+AGG | - | chr7.2:5194864-5194883 | MS.gene06998:CDS | 55.0% | |
| ! | AATCAGCACTTGCTGAGGCG+AGG | - | chr7.2:5195980-5195999 | MS.gene06998:CDS | 55.0% |
| ! | ACTTGCTGAGGCGAGGCAAA+TGG | - | chr7.2:5195987-5196006 | MS.gene06998:CDS | 55.0% |
| ! | GTCGGGGGTTCCTTTGAGAA+TGG | - | chr7.2:5195540-5195559 | MS.gene06998:CDS | 55.0% |
| ! | TAGACCGAGCGAAGTGCTTG+AGG | + | chr7.2:5193992-5194011 | None:intergenic | 55.0% |
| !! | ACGAGCAACGGACTGAAGCT+TGG | + | chr7.2:5194138-5194157 | None:intergenic | 55.0% |
| ATCACCTGCGAGATGCGCGT+TGG | + | chr7.2:5194276-5194295 | None:intergenic | 60.0% | |
| ATCGGAGATCATCGACGGCG+AGG | + | chr7.2:5194064-5194083 | None:intergenic | 60.0% | |
| CCTGGACCCTCGACTACCAA+AGG | + | chr7.2:5196151-5196170 | None:intergenic | 60.0% | |
| CGACGGCGAGGATGAAGTCT+TGG | + | chr7.2:5194052-5194071 | None:intergenic | 60.0% | |
| GAGGAAAGCTCGTGATGCCG+CGG | - | chr7.2:5195591-5195610 | MS.gene06998:CDS | 60.0% | |
| GCCGGAGGCAATTTCCTCTG+AGG | - | chr7.2:5195572-5195591 | MS.gene06998:CDS | 60.0% | |
| TCGCCATGCAGCACAGCTGT+CGG | - | chr7.2:5195522-5195541 | MS.gene06998:CDS | 60.0% | |
| TCTGATGATCCGCCCCATGG+TGG | - | chr7.2:5195688-5195707 | MS.gene06998:CDS | 60.0% | |
| TGCCGCGGAAGAGACACTGT+CGG | - | chr7.2:5195606-5195625 | MS.gene06998:CDS | 60.0% | |
| TGGCGGTGGAGAGAAGAAGC+TGG | + | chr7.2:5193893-5193912 | None:intergenic | 60.0% | |
| ! | CCTTTGGTAGTCGAGGGTCC+AGG | - | chr7.2:5196148-5196167 | MS.gene06998:CDS | 60.0% |
| ! | GCGACAACAATCAGGCACCG+TGG | + | chr7.2:5195284-5195303 | None:intergenic | 60.0% |
| CCATGCAGCACAGCTGTCGG+GGG | - | chr7.2:5195525-5195544 | MS.gene06998:CDS | 65.0% | |
| CCCCGACAGTGTCTCTTCCG+CGG | + | chr7.2:5195611-5195630 | None:intergenic | 65.0% | |
| CCGCGGAAGAGACACTGTCG+GGG | - | chr7.2:5195608-5195627 | MS.gene06998:CDS | 65.0% | |
| CGCCATGCAGCACAGCTGTC+GGG | - | chr7.2:5195523-5195542 | MS.gene06998:CDS | 65.0% | |
| CGTGTGTTGAGGACTGGGGG+TGG | - | chr7.2:5194875-5194894 | MS.gene06998:CDS | 65.0% | |
| CTGGGTGACACCGCTAACCG+AGG | + | chr7.2:5195446-5195465 | None:intergenic | 65.0% | |
| GCCATGCAGCACAGCTGTCG+GGG | - | chr7.2:5195524-5195543 | MS.gene06998:CDS | 65.0% | |
| GCCGCGGAAGAGACACTGTC+GGG | - | chr7.2:5195607-5195626 | MS.gene06998:CDS | 65.0% | |
| TCCGCGCCGGAAAATCCCTC+AGG | - | chr7.2:5193836-5193855 | MS.gene06998:CDS | 65.0% | |
| TTCCGGCGCGGAGGTTTCGA+CGG | + | chr7.2:5193828-5193847 | None:intergenic | 65.0% | |
| ! | GCCTGAGGGATTTTCCGGCG+CGG | + | chr7.2:5193840-5193859 | None:intergenic | 65.0% |
| ! | TGAGGGATTTTCCGGCGCGG+AGG | + | chr7.2:5193837-5193856 | None:intergenic | 65.0% |
| !! | CTCGGTTAGCGGTGTCACCC+AGG | - | chr7.2:5195444-5195463 | MS.gene06998:CDS | 65.0% |
| ACCCGTCGAAACCTCCGCGC+CGG | - | chr7.2:5193823-5193842 | MS.gene06998:CDS | 70.0% | |
| CCCCCGACAGCTGTGCTGCA+TGG | + | chr7.2:5195528-5195547 | None:intergenic | 70.0% | |
| TCCGGCGCGGAGGTTTCGAC+GGG | + | chr7.2:5193827-5193846 | None:intergenic | 70.0% | |
| CGCGCCAACGCGCATCTCGC+AGG | - | chr7.2:5194269-5194288 | MS.gene06998:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 5193819 | 5196230 | 5193819 | ID=MS.gene06998 |
| chr7.2 | mRNA | 5193819 | 5196230 | 5193819 | ID=MS.gene06998.t1;Parent=MS.gene06998 |
| chr7.2 | exon | 5193819 | 5196230 | 5193819 | ID=MS.gene06998.t1.exon1;Parent=MS.gene06998.t1 |
| chr7.2 | CDS | 5193819 | 5196230 | 5193819 | ID=cds.MS.gene06998.t1;Parent=MS.gene06998.t1 |
| Gene Sequence |
| Protein sequence |
