Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59241.t1 | XP_003609315.1 | 100 | 345 | 0 | 0 | 1 | 345 | 1 | 345 | 2.40E-183 | 651.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59241.t1 | Q3E6T0 | 81.7 | 344 | 63 | 0 | 2 | 345 | 6 | 349 | 3.3e-157 | 555.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59241.t1 | G7JCY0 | 100.0 | 345 | 0 | 0 | 1 | 345 | 1 | 345 | 1.7e-183 | 651.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene59241 | 0.821231 | 4.51E-53 | -1.69E-46 |
| MS.gene049227 | MS.gene59241 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene59241 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene59241 | 0.861774 | 8.10E-64 | -1.69E-46 |
| MS.gene049711 | MS.gene59241 | 0.858422 | 8.33E-63 | -1.69E-46 |
| MS.gene049807 | MS.gene59241 | 0.88998 | 1.49E-73 | -1.69E-46 |
| MS.gene049824 | MS.gene59241 | 0.826259 | 2.99E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene59241 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene59241 | 0.853242 | 2.72E-61 | -1.69E-46 |
| MS.gene050224 | MS.gene59241 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene050253 | MS.gene59241 | 0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene59241 | 0.812926 | 3.32E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene59241 | 0.851114 | 1.10E-60 | -1.69E-46 |
| MS.gene050551 | MS.gene59241 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene59241 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene59241 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene050646 | MS.gene59241 | 0.829305 | 5.55E-55 | -1.69E-46 |
| MS.gene050689 | MS.gene59241 | 0.808527 | 2.96E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene59241 | 0.823879 | 1.09E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene59241 | 0.86687 | 2.08E-65 | -1.69E-46 |
| MS.gene050945 | MS.gene59241 | 0.869103 | 3.98E-66 | -1.69E-46 |
| MS.gene050955 | MS.gene59241 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene59241 | 0.843135 | 1.69E-58 | -1.69E-46 |
| MS.gene051201 | MS.gene59241 | 0.817078 | 3.97E-52 | -1.69E-46 |
| MS.gene051233 | MS.gene59241 | 0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene59241 | 0.900942 | 4.42E-78 | -1.69E-46 |
| MS.gene051279 | MS.gene59241 | 0.817645 | 2.96E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene59241 | 0.846817 | 1.71E-59 | -1.69E-46 |
| MS.gene051381 | MS.gene59241 | 0.815061 | 1.12E-51 | -1.69E-46 |
| MS.gene051450 | MS.gene59241 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene051628 | MS.gene59241 | 0.814632 | 1.40E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene59241 | 0.818597 | 1.80E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene59241 | 0.822784 | 1.97E-53 | -1.69E-46 |
| MS.gene051720 | MS.gene59241 | 0.814381 | 1.59E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene59241 | 0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene051832 | MS.gene59241 | 0.800028 | 1.75E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene59241 | 0.846842 | 1.68E-59 | -1.69E-46 |
| MS.gene051885 | MS.gene59241 | 0.860035 | 2.73E-63 | -1.69E-46 |
| MS.gene051902 | MS.gene59241 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene052016 | MS.gene59241 | 0.82177 | 3.38E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene59241 | 0.861504 | 9.80E-64 | -1.69E-46 |
| MS.gene052133 | MS.gene59241 | 0.824368 | 8.38E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene59241 | -0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene052242 | MS.gene59241 | -0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene59241 | 0.873024 | 2.03E-67 | -1.69E-46 |
| MS.gene052335 | MS.gene59241 | 0.862353 | 5.38E-64 | -1.69E-46 |
| MS.gene052397 | MS.gene59241 | 0.803863 | 2.85E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene59241 | 0.843122 | 1.70E-58 | -1.69E-46 |
| MS.gene052514 | MS.gene59241 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene59241 | 0.844978 | 5.41E-59 | -1.69E-46 |
| MS.gene052533 | MS.gene59241 | 0.878386 | 2.93E-69 | -1.69E-46 |
| MS.gene052609 | MS.gene59241 | 0.85549 | 6.09E-62 | -1.69E-46 |
| MS.gene052793 | MS.gene59241 | 0.809443 | 1.89E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene59241 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene59241 | 0.838698 | 2.46E-57 | -1.69E-46 |
| MS.gene053122 | MS.gene59241 | 0.829876 | 4.03E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene59241 | 0.887633 | 1.20E-72 | -1.69E-46 |
| MS.gene053144 | MS.gene59241 | 0.856063 | 4.14E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene59241 | 0.837427 | 5.23E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene59241 | 0.814299 | 1.65E-51 | -1.69E-46 |
| MS.gene053456 | MS.gene59241 | 0.807338 | 5.31E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene59241 | 0.849908 | 2.39E-60 | -1.69E-46 |
| MS.gene053597 | MS.gene59241 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene053599 | MS.gene59241 | 0.830044 | 3.66E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene59241 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene053678 | MS.gene59241 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene59241 | 0.801993 | 6.93E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene59241 | 0.840264 | 9.65E-58 | -1.69E-46 |
| MS.gene054222 | MS.gene59241 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene054250 | MS.gene59241 | 0.810697 | 1.01E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene59241 | 0.825264 | 5.15E-54 | -1.69E-46 |
| MS.gene054413 | MS.gene59241 | 0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene59241 | 0.840079 | 1.08E-57 | -1.69E-46 |
| MS.gene054584 | MS.gene59241 | 0.847545 | 1.08E-59 | -1.69E-46 |
| MS.gene054585 | MS.gene59241 | 0.810835 | 9.46E-51 | -1.69E-46 |
| MS.gene054709 | MS.gene59241 | 0.815355 | 9.65E-52 | -1.69E-46 |
| MS.gene054824 | MS.gene59241 | 0.845463 | 4.00E-59 | -1.69E-46 |
| MS.gene055141 | MS.gene59241 | 0.812533 | 4.04E-51 | -1.69E-46 |
| MS.gene055220 | MS.gene59241 | 0.811295 | 7.52E-51 | -1.69E-46 |
| MS.gene055221 | MS.gene59241 | 0.83168 | 1.45E-55 | -1.69E-46 |
| MS.gene055334 | MS.gene59241 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene59241 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene05538 | MS.gene59241 | 0.830056 | 3.64E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene59241 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene59241 | 0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene59241 | 0.832877 | 7.36E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene59241 | 0.846514 | 2.07E-59 | -1.69E-46 |
| MS.gene055537 | MS.gene59241 | 0.823998 | 1.02E-53 | -1.69E-46 |
| MS.gene055555 | MS.gene59241 | 0.810726 | 9.99E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene59241 | -0.818273 | 2.14E-52 | -1.69E-46 |
| MS.gene05574 | MS.gene59241 | 0.804788 | 1.83E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene59241 | 0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene055975 | MS.gene59241 | 0.824853 | 6.44E-54 | -1.69E-46 |
| MS.gene056005 | MS.gene59241 | 0.801494 | 8.77E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene59241 | -0.820871 | 5.45E-53 | -1.69E-46 |
| MS.gene056075 | MS.gene59241 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene59241 | 0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene59241 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene59241 | 0.837124 | 6.25E-57 | -1.69E-46 |
| MS.gene056390 | MS.gene59241 | 0.809257 | 2.07E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene59241 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene056578 | MS.gene59241 | 0.833512 | 5.11E-56 | -1.69E-46 |
| MS.gene056677 | MS.gene59241 | 0.842022 | 3.33E-58 | -1.69E-46 |
| MS.gene056699 | MS.gene59241 | 0.819909 | 9.07E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene59241 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene59241 | 0.891456 | 3.91E-74 | -1.69E-46 |
| MS.gene057705 | MS.gene59241 | 0.824317 | 8.62E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene59241 | 0.809236 | 2.09E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene59241 | 0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene058074 | MS.gene59241 | 0.815231 | 1.03E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene59241 | 0.839938 | 1.17E-57 | -1.69E-46 |
| MS.gene058159 | MS.gene59241 | 0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene058261 | MS.gene59241 | 0.826281 | 2.96E-54 | -1.69E-46 |
| MS.gene058330 | MS.gene59241 | 0.835345 | 1.77E-56 | -1.69E-46 |
| MS.gene058492 | MS.gene59241 | 0.870914 | 1.02E-66 | -1.69E-46 |
| MS.gene058639 | MS.gene59241 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene59241 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene058668 | MS.gene59241 | 0.856679 | 2.73E-62 | -1.69E-46 |
| MS.gene058720 | MS.gene59241 | 0.832563 | 8.80E-56 | -1.69E-46 |
| MS.gene058852 | MS.gene59241 | 0.844339 | 8.04E-59 | -1.69E-46 |
| MS.gene059146 | MS.gene59241 | 0.835417 | 1.70E-56 | -1.69E-46 |
| MS.gene059170 | MS.gene59241 | 0.837686 | 4.49E-57 | -1.69E-46 |
| MS.gene059171 | MS.gene59241 | 0.836564 | 8.69E-57 | -1.69E-46 |
| MS.gene059227 | MS.gene59241 | 0.844159 | 8.99E-59 | -1.69E-46 |
| MS.gene059774 | MS.gene59241 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene59241 | 0.833102 | 6.47E-56 | -1.69E-46 |
| MS.gene05985 | MS.gene59241 | -0.828352 | 9.43E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene59241 | 0.863848 | 1.86E-64 | -1.69E-46 |
| MS.gene060365 | MS.gene59241 | 0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene59241 | 0.807034 | 6.16E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene59241 | 0.818386 | 2.01E-52 | -1.69E-46 |
| MS.gene060603 | MS.gene59241 | 0.80823 | 3.43E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene59241 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene59241 | 0.822677 | 2.08E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene59241 | 0.815249 | 1.02E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene59241 | 0.811284 | 7.56E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene59241 | 0.828624 | 8.11E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene59241 | 0.88227 | 1.20E-70 | -1.69E-46 |
| MS.gene061160 | MS.gene59241 | 0.833901 | 4.09E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene59241 | 0.809244 | 2.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59241.t1 | MTR_4g114360 | 100.000 | 345 | 0 | 0 | 1 | 345 | 1 | 345 | 0.0 | 700 |
| MS.gene59241.t1 | MTR_3g107470 | 84.302 | 344 | 54 | 0 | 2 | 345 | 6 | 349 | 0.0 | 610 |
| MS.gene59241.t1 | MTR_0011s0320 | 83.381 | 349 | 53 | 3 | 1 | 344 | 1 | 349 | 0.0 | 588 |
| MS.gene59241.t1 | MTR_0662s0010 | 100.000 | 277 | 0 | 0 | 1 | 277 | 1 | 277 | 0.0 | 556 |
| MS.gene59241.t1 | MTR_7g110380 | 44.940 | 336 | 181 | 3 | 9 | 343 | 10 | 342 | 3.20e-104 | 311 |
| MS.gene59241.t1 | MTR_4g123900 | 50.000 | 306 | 151 | 2 | 9 | 313 | 6 | 310 | 2.61e-98 | 296 |
| MS.gene59241.t1 | MTR_4g123900 | 50.871 | 287 | 139 | 2 | 9 | 294 | 6 | 291 | 5.26e-94 | 282 |
| MS.gene59241.t1 | MTR_2g070400 | 43.302 | 321 | 179 | 3 | 13 | 331 | 10 | 329 | 1.92e-85 | 261 |
| MS.gene59241.t1 | MTR_3g070000 | 32.441 | 299 | 182 | 6 | 18 | 305 | 29 | 318 | 4.46e-33 | 125 |
| MS.gene59241.t1 | MTR_8g090130 | 34.007 | 297 | 180 | 9 | 18 | 305 | 16 | 305 | 1.63e-32 | 123 |
| MS.gene59241.t1 | MTR_5g081710 | 32.558 | 301 | 183 | 6 | 16 | 305 | 11 | 302 | 3.65e-32 | 122 |
| MS.gene59241.t1 | MTR_3g462070 | 30.693 | 303 | 194 | 6 | 12 | 305 | 8 | 303 | 5.12e-31 | 119 |
| MS.gene59241.t1 | MTR_1g030320 | 23.684 | 342 | 244 | 7 | 3 | 332 | 1 | 337 | 1.01e-27 | 111 |
| MS.gene59241.t1 | MTR_3g072380 | 23.708 | 329 | 239 | 6 | 11 | 332 | 12 | 335 | 2.66e-27 | 110 |
| MS.gene59241.t1 | MTR_4g018760 | 30.928 | 291 | 191 | 5 | 21 | 305 | 20 | 306 | 3.70e-27 | 109 |
| MS.gene59241.t1 | MTR_8g016090 | 27.326 | 344 | 235 | 9 | 8 | 338 | 163 | 504 | 2.48e-26 | 109 |
| MS.gene59241.t1 | MTR_4g101860 | 28.947 | 304 | 202 | 7 | 18 | 313 | 57 | 354 | 9.83e-25 | 103 |
| MS.gene59241.t1 | MTR_8g016090 | 28.302 | 265 | 179 | 6 | 84 | 338 | 191 | 454 | 6.30e-20 | 90.9 |
| MS.gene59241.t1 | MTR_4g058860 | 26.957 | 345 | 208 | 15 | 25 | 345 | 22 | 346 | 2.35e-18 | 85.1 |
| MS.gene59241.t1 | MTR_2g094640 | 25.449 | 334 | 213 | 13 | 25 | 344 | 22 | 333 | 5.46e-18 | 84.3 |
| MS.gene59241.t1 | MTR_3g094270 | 25.723 | 311 | 186 | 12 | 42 | 335 | 37 | 319 | 5.41e-15 | 75.5 |
| MS.gene59241.t1 | MTR_3g094260 | 25.161 | 310 | 189 | 10 | 42 | 335 | 37 | 319 | 4.57e-14 | 72.8 |
| MS.gene59241.t1 | MTR_3g072380 | 24.859 | 177 | 129 | 3 | 11 | 186 | 12 | 185 | 8.13e-13 | 67.8 |
| MS.gene59241.t1 | MTR_2g038410 | 24.768 | 323 | 217 | 9 | 28 | 345 | 69 | 370 | 2.82e-12 | 67.4 |
| MS.gene59241.t1 | MTR_8g016090 | 25.275 | 182 | 132 | 3 | 8 | 186 | 163 | 343 | 8.22e-12 | 66.2 |
| MS.gene59241.t1 | MTR_6g005480 | 24.920 | 313 | 215 | 8 | 4 | 305 | 104 | 407 | 2.44e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59241.t1 | AT5G25400 | 81.686 | 344 | 63 | 0 | 2 | 345 | 6 | 349 | 0.0 | 598 |
| MS.gene59241.t1 | AT4G32390 | 82.029 | 345 | 61 | 1 | 2 | 345 | 6 | 350 | 0.0 | 593 |
| MS.gene59241.t1 | AT2G25520 | 82.558 | 344 | 58 | 1 | 2 | 345 | 6 | 347 | 0.0 | 593 |
| MS.gene59241.t1 | AT5G11230 | 79.710 | 345 | 69 | 1 | 2 | 345 | 6 | 350 | 0.0 | 569 |
| MS.gene59241.t1 | AT3G17430 | 45.427 | 328 | 177 | 2 | 9 | 335 | 7 | 333 | 4.66e-98 | 295 |
| MS.gene59241.t1 | AT3G17430 | 45.427 | 328 | 177 | 2 | 9 | 335 | 7 | 333 | 4.66e-98 | 295 |
| MS.gene59241.t1 | AT1G48230 | 46.334 | 341 | 169 | 3 | 9 | 336 | 7 | 346 | 1.35e-96 | 291 |
| MS.gene59241.t1 | AT3G14410 | 42.771 | 332 | 187 | 3 | 4 | 333 | 5 | 335 | 1.28e-82 | 254 |
| MS.gene59241.t1 | AT1G53660 | 41.390 | 331 | 183 | 6 | 6 | 334 | 9 | 330 | 2.30e-82 | 253 |
| MS.gene59241.t1 | AT1G53660 | 41.390 | 331 | 183 | 6 | 6 | 334 | 27 | 348 | 4.49e-82 | 253 |
| MS.gene59241.t1 | AT1G53660 | 42.434 | 304 | 164 | 6 | 33 | 334 | 2 | 296 | 2.09e-78 | 242 |
| MS.gene59241.t1 | AT1G48230 | 44.891 | 274 | 137 | 3 | 76 | 336 | 1 | 273 | 1.91e-74 | 232 |
| MS.gene59241.t1 | AT1G53660 | 42.449 | 245 | 131 | 5 | 91 | 334 | 1 | 236 | 1.77e-58 | 189 |
| MS.gene59241.t1 | AT1G53660 | 41.294 | 201 | 117 | 1 | 5 | 204 | 26 | 226 | 6.01e-51 | 170 |
| MS.gene59241.t1 | AT1G21870 | 23.810 | 315 | 230 | 5 | 21 | 330 | 22 | 331 | 1.26e-30 | 119 |
| MS.gene59241.t1 | AT3G11320 | 31.757 | 296 | 188 | 5 | 18 | 305 | 15 | 304 | 1.58e-30 | 118 |
| MS.gene59241.t1 | AT5G05820 | 32.095 | 296 | 187 | 5 | 18 | 305 | 15 | 304 | 4.85e-30 | 117 |
| MS.gene59241.t1 | AT1G77610 | 24.383 | 324 | 232 | 6 | 21 | 336 | 16 | 334 | 4.41e-29 | 115 |
| MS.gene59241.t1 | AT3G10290 | 30.392 | 306 | 197 | 8 | 9 | 305 | 53 | 351 | 4.15e-27 | 110 |
| MS.gene59241.t1 | AT5G04160 | 30.255 | 314 | 199 | 8 | 3 | 305 | 1 | 305 | 2.82e-26 | 106 |
| MS.gene59241.t1 | AT1G12500 | 28.065 | 310 | 211 | 6 | 3 | 305 | 48 | 352 | 1.26e-23 | 100 |
| MS.gene59241.t1 | AT1G06470 | 25.000 | 336 | 232 | 9 | 17 | 335 | 78 | 410 | 6.48e-23 | 99.0 |
| MS.gene59241.t1 | AT1G06470 | 25.000 | 336 | 232 | 9 | 17 | 335 | 78 | 410 | 6.48e-23 | 99.0 |
| MS.gene59241.t1 | AT1G06470 | 25.000 | 336 | 232 | 9 | 17 | 335 | 78 | 410 | 6.48e-23 | 99.0 |
| MS.gene59241.t1 | AT1G06470 | 25.000 | 336 | 232 | 9 | 17 | 335 | 78 | 410 | 6.48e-23 | 99.0 |
| MS.gene59241.t1 | AT2G28315 | 27.187 | 320 | 199 | 13 | 25 | 333 | 22 | 318 | 7.64e-19 | 86.7 |
| MS.gene59241.t1 | AT2G28315 | 28.276 | 290 | 181 | 12 | 25 | 303 | 22 | 295 | 2.20e-17 | 82.0 |
| MS.gene59241.t1 | AT2G30460 | 27.941 | 272 | 165 | 9 | 83 | 336 | 73 | 331 | 9.14e-15 | 74.7 |
| MS.gene59241.t1 | AT2G30460 | 27.941 | 272 | 165 | 9 | 83 | 336 | 73 | 331 | 9.14e-15 | 74.7 |
| MS.gene59241.t1 | AT2G30460 | 27.941 | 272 | 165 | 9 | 83 | 336 | 52 | 310 | 9.74e-15 | 74.7 |
| MS.gene59241.t1 | AT2G30460 | 27.941 | 272 | 165 | 9 | 83 | 336 | 52 | 310 | 9.74e-15 | 74.7 |
| MS.gene59241.t1 | AT2G30460 | 27.941 | 272 | 165 | 9 | 83 | 336 | 52 | 310 | 9.74e-15 | 74.7 |
| MS.gene59241.t1 | AT1G06890 | 25.397 | 315 | 195 | 11 | 42 | 336 | 37 | 331 | 4.21e-13 | 70.1 |
| MS.gene59241.t1 | AT1G06890 | 25.397 | 315 | 195 | 11 | 42 | 336 | 37 | 331 | 4.31e-13 | 69.7 |
| MS.gene59241.t1 | AT1G06890 | 25.397 | 315 | 195 | 11 | 42 | 336 | 37 | 331 | 4.66e-13 | 69.7 |
| MS.gene59241.t1 | AT1G06890 | 25.397 | 315 | 195 | 11 | 42 | 336 | 37 | 331 | 4.66e-13 | 69.7 |
| MS.gene59241.t1 | AT5G33320 | 24.272 | 309 | 220 | 7 | 4 | 305 | 98 | 399 | 8.23e-11 | 63.2 |
Find 64 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTGTTACACTTCAGCTTA+TGG | 0.214354 | 8.1:+15460646 | MS.gene59241:CDS |
| CCGATTAATTTGATTGGTTA+TGG | 0.225210 | 8.1:+15461013 | MS.gene59241:CDS |
| GGTGTTGCTGTTGCTGCTTA+TGG | 0.242108 | 8.1:+15460602 | MS.gene59241:CDS |
| ATTCTCGTGGTCGGTGATTA+AGG | 0.249502 | 8.1:+15460979 | MS.gene59241:CDS |
| GTGTTGCTGTTGCTGCTTAT+GGG | 0.272371 | 8.1:+15460603 | MS.gene59241:CDS |
| CACTTTACTCGCTTTCGTTA+TGG | 0.286530 | 8.1:+15460429 | MS.gene59241:CDS |
| CGATTAATTTGATTGGTTAT+GGG | 0.330326 | 8.1:+15461014 | MS.gene59241:CDS |
| TTCGAAGTTGCAGGCTCTTA+AGG | 0.341248 | 8.1:+15461069 | MS.gene59241:CDS |
| GCTTTGACTATGAATGTTGC+TGG | 0.346970 | 8.1:+15460929 | MS.gene59241:CDS |
| TAGATAAATATACGCAGAAT+TGG | 0.353850 | 8.1:-15460456 | None:intergenic |
| GTTACACCGATTAATTTGAT+TGG | 0.366012 | 8.1:+15461007 | MS.gene59241:CDS |
| GGATAACTCAAGTTTCCATT+TGG | 0.385544 | 8.1:+15460826 | MS.gene59241:CDS |
| AAGAGAAATGGAAATCATAT+TGG | 0.391631 | 8.1:-15460579 | None:intergenic |
| TTCCGATGGCGTTGTGAAGA+AGG | 0.398342 | 8.1:+15460169 | MS.gene59241:CDS |
| GGGAAGCTAAATTTGATACT+TGG | 0.404187 | 8.1:+15460624 | MS.gene59241:CDS |
| TTATAATCATTCGAAGTTGC+AGG | 0.406175 | 8.1:+15461060 | MS.gene59241:CDS |
| GAATGTTGCTGGGGTTGTTA+AGG | 0.411142 | 8.1:+15460940 | MS.gene59241:CDS |
| AGATCGAGTTGAATCAGTTC+TGG | 0.413437 | 8.1:-15461189 | None:intergenic |
| AATATGATTTCCATTTCTCT+TGG | 0.417528 | 8.1:+15460581 | MS.gene59241:CDS |
| CATACACCTACGTCGCAATC+TGG | 0.421498 | 8.1:+15460201 | MS.gene59241:CDS |
| CCTGTTGCTGTTTATTCGAT+TGG | 0.427774 | 8.1:+15460515 | MS.gene59241:CDS |
| ATGTAATACAACGAAGTAAT+CGG | 0.430025 | 8.1:-15460740 | None:intergenic |
| AACAGCAACACCAAGAGAAA+TGG | 0.430794 | 8.1:-15460591 | None:intergenic |
| CCATAACCAATCAAATTAAT+CGG | 0.432294 | 8.1:-15461013 | None:intergenic |
| TTACATTGCGCCATGTTGTT+TGG | 0.446571 | 8.1:+15460757 | MS.gene59241:CDS |
| TGAATCATGGTTAGAGAGAT+CGG | 0.453928 | 8.1:-15460296 | None:intergenic |
| CTTTGACTATGAATGTTGCT+GGG | 0.457141 | 8.1:+15460930 | MS.gene59241:CDS |
| CTCAAATCTGTTGTTCCAAT+CGG | 0.464601 | 8.1:+15460404 | MS.gene59241:CDS |
| AGATCGCGTGACATTGAAAC+AGG | 0.469171 | 8.1:-15460377 | None:intergenic |
| GGAAGCTAAATTTGATACTT+GGG | 0.472356 | 8.1:+15460625 | MS.gene59241:CDS |
| TAGATCGTAAGATGTACAAT+TGG | 0.478800 | 8.1:+15460267 | MS.gene59241:CDS |
| TTGAGCCTTCTTCTGCGTCT+CGG | 0.479012 | 8.1:-15461095 | None:intergenic |
| CCAATCGAATAAACAGCAAC+AGG | 0.480862 | 8.1:-15460515 | None:intergenic |
| TAATTTGATTGGTTATGGGT+TGG | 0.488621 | 8.1:+15461018 | MS.gene59241:CDS |
| TTGCTGGGGTTGTTAAGGAT+TGG | 0.496578 | 8.1:+15460945 | MS.gene59241:CDS |
| GTATTTGTTGTAAACGATAA+CGG | 0.498137 | 8.1:-15460240 | None:intergenic |
| AGCGAGTAAAGTGCACCGAT+TGG | 0.499200 | 8.1:-15460419 | None:intergenic |
| TGAAGAGGCTGGAAGGTTGT+TGG | 0.507877 | 8.1:+15461126 | MS.gene59241:CDS |
| GGCTTCCGAGACGCAGAAGA+AGG | 0.521970 | 8.1:+15461090 | MS.gene59241:CDS |
| AGGTTGTTGGAACAGAGAGA+TGG | 0.527055 | 8.1:+15461139 | MS.gene59241:CDS |
| CAGAGAGATGGAGAAGGGAC+TGG | 0.531231 | 8.1:+15461151 | MS.gene59241:CDS |
| GAATCATGGTTAGAGAGATC+GGG | 0.533528 | 8.1:-15460295 | None:intergenic |
| CAACAGAGTGATGAAGAGGC+TGG | 0.548342 | 8.1:+15461115 | MS.gene59241:CDS |
| GTTGATTGCATTCTCGTGGT+CGG | 0.553496 | 8.1:+15460970 | MS.gene59241:CDS |
| TGTTGAGTATCCTTCGTTGA+GGG | 0.554979 | 8.1:+15460805 | MS.gene59241:CDS |
| GGCTCAACAGAGTGATGAAG+AGG | 0.559642 | 8.1:+15461111 | MS.gene59241:CDS |
| TTGTTGAGTATCCTTCGTTG+AGG | 0.563149 | 8.1:+15460804 | MS.gene59241:CDS |
| ATGGTTAGAGAGATCGGGTA+AGG | 0.564381 | 8.1:-15460290 | None:intergenic |
| TGTTGCTGTTGCTGCTTATG+GGG | 0.565614 | 8.1:+15460604 | MS.gene59241:CDS |
| GAGATGGAGAAGGGACTGGA+AGG | 0.571557 | 8.1:+15461155 | MS.gene59241:CDS |
| AACCTTCTTCACAACGCCAT+CGG | 0.572106 | 8.1:-15460171 | None:intergenic |
| CTCTCTAACCATGATTCACA+TGG | 0.588163 | 8.1:+15460301 | MS.gene59241:CDS |
| TTTGTTGGTTGGGAAGACGT+CGG | 0.592329 | 8.1:+15460907 | MS.gene59241:CDS |
| TTGGAACAGAGAGATGGAGA+AGG | 0.602800 | 8.1:+15461145 | MS.gene59241:CDS |
| AGAGTGATGAAGAGGCTGGA+AGG | 0.603959 | 8.1:+15461119 | MS.gene59241:CDS |
| GGTTGTTGATTGCATTCTCG+TGG | 0.604485 | 8.1:+15460966 | MS.gene59241:CDS |
| GAAGATCCAGATTGCGACGT+AGG | 0.612548 | 8.1:-15460207 | None:intergenic |
| GAAGCTAAATTTGATACTTG+GGG | 0.628264 | 8.1:+15460626 | MS.gene59241:CDS |
| TGGAACAGAGAGATGGAGAA+GGG | 0.630504 | 8.1:+15461146 | MS.gene59241:CDS |
| GGATACTCAACAATAAGCCA+AGG | 0.631347 | 8.1:-15460794 | None:intergenic |
| AAACGATAACGGTGAAGCTG+AGG | 0.632551 | 8.1:-15460229 | None:intergenic |
| TTGCGACGTAGGTGTATGAG+AGG | 0.648256 | 8.1:-15460196 | None:intergenic |
| TTTGACTATGAATGTTGCTG+GGG | 0.655153 | 8.1:+15460931 | MS.gene59241:CDS |
| CTTGAGTTATCCCTCAACGA+AGG | 0.699678 | 8.1:-15460815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAGAAATGGAAATCATAT+TGG | - | chr8.1:15460582-15460601 | None:intergenic | 25.0% |
| ! | AATATGATTTCCATTTCTCT+TGG | + | chr8.1:15460581-15460600 | MS.gene59241:CDS | 25.0% |
| ! | ATGTAATACAACGAAGTAAT+CGG | - | chr8.1:15460743-15460762 | None:intergenic | 25.0% |
| ! | CCATAACCAATCAAATTAAT+CGG | - | chr8.1:15461016-15461035 | None:intergenic | 25.0% |
| ! | TAGATAAATATACGCAGAAT+TGG | - | chr8.1:15460459-15460478 | None:intergenic | 25.0% |
| !! | CGATTAATTTGATTGGTTAT+GGG | + | chr8.1:15461014-15461033 | MS.gene59241:CDS | 25.0% |
| !!! | AGGTTTTAAGAATGAAACTA+TGG | + | chr8.1:15460556-15460575 | MS.gene59241:CDS | 25.0% |
| !!! | GTATTTGTTGTAAACGATAA+CGG | - | chr8.1:15460243-15460262 | None:intergenic | 25.0% |
| GAAGCTAAATTTGATACTTG+GGG | + | chr8.1:15460626-15460645 | MS.gene59241:CDS | 30.0% | |
| GGAAGCTAAATTTGATACTT+GGG | + | chr8.1:15460625-15460644 | MS.gene59241:CDS | 30.0% | |
| TAGATCGTAAGATGTACAAT+TGG | + | chr8.1:15460267-15460286 | MS.gene59241:CDS | 30.0% | |
| TTATAATCATTCGAAGTTGC+AGG | + | chr8.1:15461060-15461079 | MS.gene59241:CDS | 30.0% | |
| ! | AGATTTTGCTTAATTCGAAG+GGG | + | chr8.1:15460705-15460724 | MS.gene59241:CDS | 30.0% |
| ! | ATTTGGATTTCGCGATTTTT+GGG | + | chr8.1:15460843-15460862 | MS.gene59241:CDS | 30.0% |
| ! | CAGATTTTGCTTAATTCGAA+GGG | + | chr8.1:15460704-15460723 | MS.gene59241:CDS | 30.0% |
| ! | CCGATTAATTTGATTGGTTA+TGG | + | chr8.1:15461013-15461032 | MS.gene59241:CDS | 30.0% |
| ! | GTTACACCGATTAATTTGAT+TGG | + | chr8.1:15461007-15461026 | MS.gene59241:CDS | 30.0% |
| ! | TAATTTGATTGGTTATGGGT+TGG | + | chr8.1:15461018-15461037 | MS.gene59241:CDS | 30.0% |
| ! | TCAGATTTTGCTTAATTCGA+AGG | + | chr8.1:15460703-15460722 | MS.gene59241:CDS | 30.0% |
| !!! | GGTGTTTTGTTTAAGAAAGA+AGG | + | chr8.1:15460536-15460555 | MS.gene59241:CDS | 30.0% |
| ACAAAAAGCCATGTGAATCA+TGG | - | chr8.1:15460312-15460331 | None:intergenic | 35.0% | |
| CAAAAATCGCGAAATCCAAA+TGG | - | chr8.1:15460844-15460863 | None:intergenic | 35.0% | |
| CTCAAATCTGTTGTTCCAAT+CGG | + | chr8.1:15460404-15460423 | MS.gene59241:CDS | 35.0% | |
| CTTTGACTATGAATGTTGCT+GGG | + | chr8.1:15460930-15460949 | MS.gene59241:CDS | 35.0% | |
| GACAAAAACACCAAACAACA+TGG | - | chr8.1:15460770-15460789 | None:intergenic | 35.0% | |
| GGATAACTCAAGTTTCCATT+TGG | + | chr8.1:15460826-15460845 | MS.gene59241:CDS | 35.0% | |
| GGGAAGCTAAATTTGATACT+TGG | + | chr8.1:15460624-15460643 | MS.gene59241:CDS | 35.0% | |
| TGAATCATGGTTAGAGAGAT+CGG | - | chr8.1:15460299-15460318 | None:intergenic | 35.0% | |
| TTTGACTATGAATGTTGCTG+GGG | + | chr8.1:15460931-15460950 | MS.gene59241:CDS | 35.0% | |
| ! | CATTTGGATTTCGCGATTTT+TGG | + | chr8.1:15460842-15460861 | MS.gene59241:CDS | 35.0% |
| AACAGCAACACCAAGAGAAA+TGG | - | chr8.1:15460594-15460613 | None:intergenic | 40.0% | |
| CACTTTACTCGCTTTCGTTA+TGG | + | chr8.1:15460429-15460448 | MS.gene59241:CDS | 40.0% | |
| CCAATCGAATAAACAGCAAC+AGG | - | chr8.1:15460518-15460537 | None:intergenic | 40.0% | |
| CTCTCTAACCATGATTCACA+TGG | + | chr8.1:15460301-15460320 | MS.gene59241:CDS | 40.0% | |
| CTTCCCAACCAACAAAAACA+CGG | - | chr8.1:15460903-15460922 | None:intergenic | 40.0% | |
| GAATCATGGTTAGAGAGATC+GGG | - | chr8.1:15460298-15460317 | None:intergenic | 40.0% | |
| GCTTTGACTATGAATGTTGC+TGG | + | chr8.1:15460929-15460948 | MS.gene59241:CDS | 40.0% | |
| GGATACTCAACAATAAGCCA+AGG | - | chr8.1:15460797-15460816 | None:intergenic | 40.0% | |
| TGTTGAGTATCCTTCGTTGA+GGG | + | chr8.1:15460805-15460824 | MS.gene59241:CDS | 40.0% | |
| TTACATTGCGCCATGTTGTT+TGG | + | chr8.1:15460757-15460776 | MS.gene59241:CDS | 40.0% | |
| TTGTTGAGTATCCTTCGTTG+AGG | + | chr8.1:15460804-15460823 | MS.gene59241:CDS | 40.0% | |
| !! | CCTGTTGCTGTTTATTCGAT+TGG | + | chr8.1:15460515-15460534 | MS.gene59241:CDS | 40.0% |
| !! | GAATCTTGCCGTGTTTTTGT+TGG | + | chr8.1:15460892-15460911 | MS.gene59241:CDS | 40.0% |
| !! | TGGTGTTTTTGTCTGTTCCT+TGG | + | chr8.1:15460777-15460796 | MS.gene59241:CDS | 40.0% |
| !! | TTGCCGTGTTTTTGTTGGTT+GGG | + | chr8.1:15460897-15460916 | MS.gene59241:CDS | 40.0% |
| !!! | TGCTTTTGAAGCAACACGTT+TGG | + | chr8.1:15460673-15460692 | MS.gene59241:CDS | 40.0% |
| AACCTTCTTCACAACGCCAT+CGG | - | chr8.1:15460174-15460193 | None:intergenic | 45.0% | |
| AGATCGCGTGACATTGAAAC+AGG | - | chr8.1:15460380-15460399 | None:intergenic | 45.0% | |
| AGGTTGTTGGAACAGAGAGA+TGG | + | chr8.1:15461139-15461158 | MS.gene59241:CDS | 45.0% | |
| ATGGTTAGAGAGATCGGGTA+AGG | - | chr8.1:15460293-15460312 | None:intergenic | 45.0% | |
| ATTCTCGTGGTCGGTGATTA+AGG | + | chr8.1:15460979-15460998 | MS.gene59241:CDS | 45.0% | |
| CTTGAGTTATCCCTCAACGA+AGG | - | chr8.1:15460818-15460837 | None:intergenic | 45.0% | |
| GAATGTTGCTGGGGTTGTTA+AGG | + | chr8.1:15460940-15460959 | MS.gene59241:CDS | 45.0% | |
| GTTGATTGCATTCTCGTGGT+CGG | + | chr8.1:15460970-15460989 | MS.gene59241:CDS | 45.0% | |
| TGGAACAGAGAGATGGAGAA+GGG | + | chr8.1:15461146-15461165 | MS.gene59241:CDS | 45.0% | |
| TTCGAAGTTGCAGGCTCTTA+AGG | + | chr8.1:15461069-15461088 | MS.gene59241:CDS | 45.0% | |
| TTGCTGGGGTTGTTAAGGAT+TGG | + | chr8.1:15460945-15460964 | MS.gene59241:CDS | 45.0% | |
| TTGGAACAGAGAGATGGAGA+AGG | + | chr8.1:15461145-15461164 | MS.gene59241:CDS | 45.0% | |
| ! | AAACGATAACGGTGAAGCTG+AGG | - | chr8.1:15460232-15460251 | None:intergenic | 45.0% |
| ! | GGGTGTTACACTTCAGCTTA+TGG | + | chr8.1:15460646-15460665 | MS.gene59241:CDS | 45.0% |
| ! | GGTTGTTGATTGCATTCTCG+TGG | + | chr8.1:15460966-15460985 | MS.gene59241:CDS | 45.0% |
| ! | GTGTTGCTGTTGCTGCTTAT+GGG | + | chr8.1:15460603-15460622 | MS.gene59241:CDS | 45.0% |
| ! | TGTTGCTGTTGCTGCTTATG+GGG | + | chr8.1:15460604-15460623 | MS.gene59241:CDS | 45.0% |
| ! | TTTGTTGGTTGGGAAGACGT+CGG | + | chr8.1:15460907-15460926 | MS.gene59241:CDS | 45.0% |
| !! | CTTGCCGTGTTTTTGTTGGT+TGG | + | chr8.1:15460896-15460915 | MS.gene59241:CDS | 45.0% |
| !!! | GGTTATGGGTTGGCGTTTTT+GGG | + | chr8.1:15461028-15461047 | MS.gene59241:CDS | 45.0% |
| !!! | GTTATGGGTTGGCGTTTTTG+GGG | + | chr8.1:15461029-15461048 | MS.gene59241:CDS | 45.0% |
| !!! | TGGTTATGGGTTGGCGTTTT+TGG | + | chr8.1:15461027-15461046 | MS.gene59241:CDS | 45.0% |
| !!! | TTATGGGTTGGCGTTTTTGG+GGG | + | chr8.1:15461030-15461049 | MS.gene59241:CDS | 45.0% |
| AGAGTGATGAAGAGGCTGGA+AGG | + | chr8.1:15461119-15461138 | MS.gene59241:CDS | 50.0% | |
| CAACAGAGTGATGAAGAGGC+TGG | + | chr8.1:15461115-15461134 | MS.gene59241:CDS | 50.0% | |
| CATACACCTACGTCGCAATC+TGG | + | chr8.1:15460201-15460220 | MS.gene59241:CDS | 50.0% | |
| GAAGATCCAGATTGCGACGT+AGG | - | chr8.1:15460210-15460229 | None:intergenic | 50.0% | |
| GGCTCAACAGAGTGATGAAG+AGG | + | chr8.1:15461111-15461130 | MS.gene59241:CDS | 50.0% | |
| TGAAGAGGCTGGAAGGTTGT+TGG | + | chr8.1:15461126-15461145 | MS.gene59241:CDS | 50.0% | |
| TTCCGATGGCGTTGTGAAGA+AGG | + | chr8.1:15460169-15460188 | MS.gene59241:CDS | 50.0% | |
| TTGAGCCTTCTTCTGCGTCT+CGG | - | chr8.1:15461098-15461117 | None:intergenic | 50.0% | |
| TTGCGACGTAGGTGTATGAG+AGG | - | chr8.1:15460199-15460218 | None:intergenic | 50.0% | |
| ! | AGCGAGTAAAGTGCACCGAT+TGG | - | chr8.1:15460422-15460441 | None:intergenic | 50.0% |
| !! | GGTGTTGCTGTTGCTGCTTA+TGG | + | chr8.1:15460602-15460621 | MS.gene59241:CDS | 50.0% |
| CAGAGAGATGGAGAAGGGAC+TGG | + | chr8.1:15461151-15461170 | MS.gene59241:CDS | 55.0% | |
| GAGATGGAGAAGGGACTGGA+AGG | + | chr8.1:15461155-15461174 | MS.gene59241:CDS | 55.0% | |
| GGCTTCCGAGACGCAGAAGA+AGG | + | chr8.1:15461090-15461109 | MS.gene59241:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 15460161 | 15461198 | 15460161 | ID=MS.gene59241 |
| chr8.1 | mRNA | 15460161 | 15461198 | 15460161 | ID=MS.gene59241.t1;Parent=MS.gene59241 |
| chr8.1 | exon | 15460161 | 15461198 | 15460161 | ID=MS.gene59241.t1.exon1;Parent=MS.gene59241.t1 |
| chr8.1 | CDS | 15460161 | 15461198 | 15460161 | ID=cds.MS.gene59241.t1;Parent=MS.gene59241.t1 |
| Gene Sequence |
| Protein sequence |
