Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85168.t1 | XP_024631449.1 | 97.1 | 699 | 17 | 2 | 56 | 754 | 55 | 750 | 0.00E+00 | 1329.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85168.t1 | Q9LF10 | 53.4 | 704 | 242 | 10 | 55 | 743 | 85 | 717 | 1.5e-186 | 654.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85168.t1 | A0A396JMR9 | 97.1 | 699 | 17 | 2 | 56 | 754 | 55 | 750 | 0.0e+00 | 1329.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene85168 | 0.820917 | 5.32E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene85168 | 0.847998 | 8.11E-60 | -1.69E-46 |
| MS.gene049153 | MS.gene85168 | 0.819144 | 1.36E-52 | -1.69E-46 |
| MS.gene049260 | MS.gene85168 | 0.825578 | 4.34E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene85168 | 0.868695 | 5.39E-66 | -1.69E-46 |
| MS.gene04933 | MS.gene85168 | 0.813307 | 2.74E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene85168 | 0.802247 | 6.14E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene85168 | 0.839814 | 1.27E-57 | -1.69E-46 |
| MS.gene049629 | MS.gene85168 | 0.802189 | 6.31E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene85168 | 0.895709 | 7.40E-76 | -1.69E-46 |
| MS.gene049910 | MS.gene85168 | 0.84329 | 1.54E-58 | -1.69E-46 |
| MS.gene049915 | MS.gene85168 | 0.823745 | 1.17E-53 | -1.69E-46 |
| MS.gene050099 | MS.gene85168 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene85168 | 0.80071 | 1.27E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene85168 | 0.863497 | 2.39E-64 | -1.69E-46 |
| MS.gene050227 | MS.gene85168 | 0.857759 | 1.31E-62 | -1.69E-46 |
| MS.gene050228 | MS.gene85168 | 0.861362 | 1.08E-63 | -1.69E-46 |
| MS.gene050301 | MS.gene85168 | 0.83969 | 1.36E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene85168 | -0.848955 | 4.41E-60 | -1.69E-46 |
| MS.gene050558 | MS.gene85168 | 0.847705 | 9.76E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene85168 | -0.864679 | 1.02E-64 | -1.69E-46 |
| MS.gene050642 | MS.gene85168 | 0.875188 | 3.75E-68 | -1.69E-46 |
| MS.gene050762 | MS.gene85168 | 0.812466 | 4.18E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene85168 | 0.814441 | 1.54E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene85168 | 0.807529 | 4.84E-50 | -1.69E-46 |
| MS.gene05119 | MS.gene85168 | -0.830951 | 2.20E-55 | -1.69E-46 |
| MS.gene051240 | MS.gene85168 | 0.806421 | 8.30E-50 | -1.69E-46 |
| MS.gene051257 | MS.gene85168 | 0.827134 | 1.85E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene85168 | 0.814267 | 1.68E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene85168 | 0.872142 | 3.99E-67 | -1.69E-46 |
| MS.gene051663 | MS.gene85168 | 0.869119 | 3.93E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene85168 | 0.855906 | 4.61E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene85168 | 0.871094 | 8.88E-67 | -1.69E-46 |
| MS.gene052077 | MS.gene85168 | 0.830319 | 3.14E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene85168 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene85168 | 0.853022 | 3.14E-61 | -1.69E-46 |
| MS.gene052178 | MS.gene85168 | 0.843295 | 1.53E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene85168 | 0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene85168 | 0.843217 | 1.60E-58 | -1.69E-46 |
| MS.gene052309 | MS.gene85168 | -0.855012 | 8.39E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene85168 | 0.823151 | 1.62E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene85168 | 0.849704 | 2.73E-60 | -1.69E-46 |
| MS.gene052600 | MS.gene85168 | 0.872374 | 3.34E-67 | -1.69E-46 |
| MS.gene052778 | MS.gene85168 | 0.807487 | 4.94E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene85168 | 0.827556 | 1.47E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene85168 | 0.812184 | 4.82E-51 | -1.69E-46 |
| MS.gene052860 | MS.gene85168 | 0.813036 | 3.14E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene85168 | 0.810152 | 1.33E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene85168 | 0.900551 | 6.54E-78 | -1.69E-46 |
| MS.gene053907 | MS.gene85168 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene85168 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene054185 | MS.gene85168 | 0.811121 | 8.20E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene85168 | 0.825862 | 3.72E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene85168 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene054542 | MS.gene85168 | 0.825314 | 5.01E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene85168 | 0.878865 | 1.99E-69 | -1.69E-46 |
| MS.gene054942 | MS.gene85168 | 0.878039 | 3.88E-69 | -1.69E-46 |
| MS.gene054983 | MS.gene85168 | 0.829304 | 5.55E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene85168 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene85168 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene85168 | 0.855334 | 6.76E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene85168 | 0.850696 | 1.44E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene85168 | 0.814398 | 1.57E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene85168 | 0.808191 | 3.50E-50 | -1.69E-46 |
| MS.gene055816 | MS.gene85168 | -0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene055859 | MS.gene85168 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene85168 | -0.81583 | 7.56E-52 | -1.69E-46 |
| MS.gene056400 | MS.gene85168 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene85168 | 0.828678 | 7.87E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene85168 | 0.845804 | 3.23E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene85168 | 0.871177 | 8.33E-67 | -1.69E-46 |
| MS.gene057121 | MS.gene85168 | 0.855671 | 5.39E-62 | -1.69E-46 |
| MS.gene057245 | MS.gene85168 | 0.806466 | 8.11E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene85168 | 0.839726 | 1.33E-57 | -1.69E-46 |
| MS.gene057439 | MS.gene85168 | 0.830022 | 3.71E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene85168 | 0.815129 | 1.08E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene85168 | 0.824678 | 7.09E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene85168 | 0.865565 | 5.39E-65 | -1.69E-46 |
| MS.gene05811 | MS.gene85168 | 0.87958 | 1.11E-69 | -1.69E-46 |
| MS.gene058139 | MS.gene85168 | 0.803325 | 3.68E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene85168 | 0.855328 | 6.79E-62 | -1.69E-46 |
| MS.gene058182 | MS.gene85168 | 0.843896 | 1.06E-58 | -1.69E-46 |
| MS.gene058236 | MS.gene85168 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene85168 | 0.812586 | 3.93E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene85168 | 0.817245 | 3.64E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene85168 | 0.813145 | 2.97E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene85168 | 0.842536 | 2.44E-58 | -1.69E-46 |
| MS.gene058833 | MS.gene85168 | 0.866088 | 3.68E-65 | -1.69E-46 |
| MS.gene058845 | MS.gene85168 | 0.874508 | 6.40E-68 | -1.69E-46 |
| MS.gene05907 | MS.gene85168 | 0.836083 | 1.15E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene85168 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene85168 | 0.803284 | 3.75E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene85168 | 0.86273 | 4.12E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene85168 | 0.821746 | 3.43E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene85168 | 0.878192 | 3.43E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene85168 | 0.867078 | 1.78E-65 | -1.69E-46 |
| MS.gene059899 | MS.gene85168 | 0.846691 | 1.85E-59 | -1.69E-46 |
| MS.gene060084 | MS.gene85168 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene060297 | MS.gene85168 | 0.814028 | 1.90E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene85168 | 0.85486 | 9.29E-62 | -1.69E-46 |
| MS.gene060480 | MS.gene85168 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene060619 | MS.gene85168 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene85168 | 0.803551 | 3.30E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene85168 | 0.854503 | 1.18E-61 | -1.69E-46 |
| MS.gene061113 | MS.gene85168 | 0.806248 | 9.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85168.t1 | MTR_2g100660 | 97.154 | 738 | 19 | 2 | 1 | 738 | 1 | 736 | 0.0 | 1473 |
| MS.gene85168.t1 | MTR_6g084410 | 40.289 | 623 | 326 | 7 | 132 | 738 | 168 | 760 | 9.68e-138 | 426 |
| MS.gene85168.t1 | MTR_1g475240 | 40.836 | 622 | 328 | 11 | 141 | 746 | 180 | 777 | 1.15e-130 | 408 |
| MS.gene85168.t1 | MTR_1g075190 | 40.836 | 622 | 328 | 11 | 141 | 746 | 180 | 777 | 1.15e-130 | 408 |
| MS.gene85168.t1 | MTR_4g126140 | 40.375 | 587 | 306 | 7 | 173 | 745 | 180 | 736 | 4.99e-125 | 391 |
| MS.gene85168.t1 | MTR_6g008410 | 39.144 | 631 | 322 | 11 | 123 | 738 | 113 | 696 | 4.84e-122 | 391 |
| MS.gene85168.t1 | MTR_8g104340 | 40.108 | 556 | 265 | 9 | 168 | 716 | 106 | 600 | 9.96e-121 | 376 |
| MS.gene85168.t1 | MTR_8g104340 | 37.961 | 461 | 218 | 9 | 167 | 620 | 105 | 504 | 1.38e-84 | 278 |
| MS.gene85168.t1 | MTR_8g104340 | 42.988 | 328 | 145 | 4 | 167 | 494 | 105 | 390 | 2.82e-77 | 256 |
| MS.gene85168.t1 | MTR_8g066010 | 38.697 | 261 | 127 | 5 | 189 | 449 | 11 | 238 | 1.45e-43 | 162 |
| MS.gene85168.t1 | MTR_1g050760 | 38.655 | 119 | 68 | 2 | 595 | 711 | 39 | 154 | 1.72e-16 | 82.0 |
| MS.gene85168.t1 | MTR_4g067300 | 36.986 | 146 | 85 | 2 | 588 | 731 | 162 | 302 | 4.28e-16 | 81.6 |
| MS.gene85168.t1 | MTR_1g050760 | 38.655 | 119 | 68 | 2 | 595 | 711 | 154 | 269 | 5.60e-16 | 81.6 |
| MS.gene85168.t1 | MTR_4g120880 | 34.177 | 158 | 101 | 1 | 592 | 749 | 193 | 347 | 5.23e-14 | 74.7 |
| MS.gene85168.t1 | MTR_4g120880 | 34.194 | 155 | 91 | 3 | 554 | 708 | 163 | 306 | 1.54e-12 | 69.7 |
| MS.gene85168.t1 | MTR_6g004480 | 37.500 | 128 | 72 | 2 | 595 | 717 | 148 | 272 | 5.79e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85168.t1 | AT5G16180 | 51.123 | 757 | 273 | 11 | 2 | 743 | 43 | 717 | 0.0 | 686 |
| MS.gene85168.t1 | AT5G16180 | 45.283 | 583 | 223 | 10 | 2 | 570 | 43 | 543 | 6.69e-145 | 436 |
| MS.gene85168.t1 | AT3G18390 | 40.711 | 619 | 318 | 10 | 142 | 740 | 205 | 794 | 1.38e-142 | 440 |
| MS.gene85168.t1 | AT3G01370 | 39.457 | 626 | 297 | 11 | 144 | 738 | 144 | 718 | 9.76e-127 | 403 |
| MS.gene85168.t1 | AT4G14510 | 38.854 | 628 | 299 | 13 | 141 | 716 | 188 | 782 | 3.23e-125 | 396 |
| MS.gene85168.t1 | AT3G23070 | 39.801 | 603 | 338 | 9 | 124 | 716 | 168 | 755 | 1.55e-118 | 378 |
| MS.gene85168.t1 | AT4G29750 | 41.421 | 577 | 282 | 11 | 173 | 735 | 249 | 783 | 8.33e-118 | 374 |
| MS.gene85168.t1 | AT4G29750 | 41.421 | 577 | 282 | 11 | 173 | 735 | 249 | 783 | 1.90e-117 | 374 |
| MS.gene85168.t1 | AT3G25440 | 34.568 | 162 | 93 | 4 | 595 | 754 | 18 | 168 | 9.14e-17 | 82.0 |
| MS.gene85168.t1 | AT3G25440 | 34.568 | 162 | 93 | 4 | 595 | 754 | 18 | 168 | 9.14e-17 | 82.0 |
| MS.gene85168.t1 | AT3G25440 | 34.568 | 162 | 93 | 4 | 595 | 754 | 18 | 168 | 9.14e-17 | 82.0 |
| MS.gene85168.t1 | AT3G25440 | 34.568 | 162 | 93 | 4 | 595 | 754 | 109 | 259 | 4.83e-16 | 81.3 |
| MS.gene85168.t1 | AT3G25440 | 34.568 | 162 | 93 | 4 | 595 | 754 | 173 | 323 | 6.99e-16 | 81.3 |
| MS.gene85168.t1 | AT2G28480 | 31.667 | 180 | 108 | 4 | 554 | 731 | 127 | 293 | 5.79e-15 | 77.8 |
| MS.gene85168.t1 | AT4G13070 | 38.710 | 124 | 72 | 2 | 588 | 710 | 171 | 291 | 7.66e-15 | 77.0 |
| MS.gene85168.t1 | AT3G27550 | 32.414 | 145 | 95 | 1 | 595 | 739 | 144 | 285 | 3.74e-11 | 67.0 |
| MS.gene85168.t1 | AT3G27550 | 35.156 | 128 | 80 | 1 | 595 | 722 | 88 | 212 | 5.07e-11 | 66.2 |
| MS.gene85168.t1 | AT3G27550 | 35.156 | 128 | 80 | 1 | 595 | 722 | 88 | 212 | 5.07e-11 | 66.2 |
Find 163 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATCTGCAACTCTTAT+TGG | 0.143177 | 2.4:-3835096 | None:intergenic |
| TCATTTCGTCAAGCTTATTT+TGG | 0.203418 | 2.4:-3835266 | None:intergenic |
| GTGGAACTTTAACAGAATTT+AGG | 0.210037 | 2.4:+3835238 | MS.gene85168:CDS |
| AGGCTGCAATAATGAGAATT+TGG | 0.214187 | 2.4:+3832596 | MS.gene85168:CDS |
| AATTGGGTTTGTTGTGATTA+AGG | 0.219985 | 2.4:-3832144 | None:intergenic |
| TATCCCTTTATGTCAAAATA+TGG | 0.250921 | 2.4:+3832711 | MS.gene85168:CDS |
| TGAAAACTTTGGGTCTAGTT+TGG | 0.299875 | 2.4:+3832420 | MS.gene85168:CDS |
| CCCAACACCTCCATGGATTA+AGG | 0.301456 | 2.4:+3832219 | MS.gene85168:CDS |
| TCCAATAAGAGTTGCAGATT+TGG | 0.307221 | 2.4:+3835095 | MS.gene85168:CDS |
| CTGGATTTGAGCCACCATTT+AGG | 0.309774 | 2.4:+3834036 | MS.gene85168:CDS |
| GTTAGGAATTGAAAGGGAAT+TGG | 0.311332 | 2.4:-3832161 | None:intergenic |
| CCACCAAAGGTGATCTTTAC+CGG | 0.314097 | 2.4:+3833793 | MS.gene85168:CDS |
| AATGCTGCATGGAAACCTTC+TGG | 0.316221 | 2.4:+3835510 | MS.gene85168:CDS |
| ATGAGAAGTTGTCTAGTTCT+TGG | 0.317321 | 2.4:+3835600 | MS.gene85168:CDS |
| TGTGAAGGCTTTCAAGTTTG+TGG | 0.322530 | 2.4:-3832366 | None:intergenic |
| TTTGCCTCTGAGTTCTTTAC+CGG | 0.328116 | 2.4:-3832323 | None:intergenic |
| TCAGAATGGTCACGTTGTTT+AGG | 0.337112 | 2.4:-3832289 | None:intergenic |
| AATCTTCGTAGAACCTTTAG+AGG | 0.341041 | 2.4:-3833709 | None:intergenic |
| TAGGACCTCGCTTCATTGAT+TGG | 0.342223 | 2.4:+3833961 | MS.gene85168:CDS |
| TCAAATCCAGGTACCACTTC+TGG | 0.344884 | 2.4:-3834023 | None:intergenic |
| CAGCTTCCTTTCTGTTCTGA+AGG | 0.347240 | 2.4:-3837384 | None:intergenic |
| ATGTTGTGAATCAAATTAAA+AGG | 0.352074 | 2.4:+3832650 | MS.gene85168:CDS |
| GTCTAGTTTGGAAAATTTGA+TGG | 0.361228 | 2.4:+3832432 | MS.gene85168:CDS |
| GATAGATTATTGGATGGTTT+AGG | 0.362889 | 2.4:+3833942 | MS.gene85168:CDS |
| CTCTGATTTGAAGCTGAAAC+TGG | 0.367254 | 2.4:+3836940 | MS.gene85168:CDS |
| TCATCTTCAATCCCATCTTT+CGG | 0.370150 | 2.4:-3835581 | None:intergenic |
| ACATTATCATCATCGTTGTT+AGG | 0.376633 | 2.4:-3832178 | None:intergenic |
| GTGAAGGCTTTCAAGTTTGT+GGG | 0.376798 | 2.4:-3832365 | None:intergenic |
| GAGGGAATGTGATAGATTAT+TGG | 0.377377 | 2.4:+3833932 | MS.gene85168:CDS |
| GCCTTAATCCATGGAGGTGT+TGG | 0.377803 | 2.4:-3832220 | None:intergenic |
| TGGGTCAAGGTTAAGAAATC+AGG | 0.379603 | 2.4:+3832616 | MS.gene85168:CDS |
| TTAGGAATTGAAAGGGAATT+GGG | 0.383453 | 2.4:-3832160 | None:intergenic |
| TCACAAGACTCAAACTCAAA+TGG | 0.385883 | 2.4:+3832384 | MS.gene85168:CDS |
| TGAGGTGGACAAATCCTAAA+TGG | 0.391591 | 2.4:-3834050 | None:intergenic |
| CATTCTGATAAAGCTTTAAC+CGG | 0.393571 | 2.4:+3832304 | MS.gene85168:CDS |
| GAGACTTGCCTTCAGTTCAT+TGG | 0.394056 | 2.4:-3834652 | None:intergenic |
| GGAAGCAGAAATACATAGAT+TGG | 0.397533 | 2.4:+3835320 | MS.gene85168:CDS |
| CCTTAATCCATGGAGGTGTT+GGG | 0.398394 | 2.4:-3832219 | None:intergenic |
| CAAATTCTTATGAAATGAAT+GGG | 0.399467 | 2.4:+3833760 | MS.gene85168:CDS |
| GAGGGAATGTTTCCGAAAGA+TGG | 0.402296 | 2.4:+3835569 | MS.gene85168:CDS |
| GTGGATGCACAAACCGCTTC+CGG | 0.404075 | 2.4:+3833983 | MS.gene85168:CDS |
| AGACTGGAGGCTTGGTTGTA+TGG | 0.407943 | 2.4:+3833637 | MS.gene85168:CDS |
| TCTCTTGAAATGCAGAGAAT+TGG | 0.409391 | 2.4:+3836740 | MS.gene85168:CDS |
| AATTGAGAAGTTGGTGGGGT+TGG | 0.409442 | 2.4:-3832255 | None:intergenic |
| ATCCCGGTAAAGATCACCTT+TGG | 0.412399 | 2.4:-3833796 | None:intergenic |
| TTGATAAAGTGTTGCTTCAA+AGG | 0.417778 | 2.4:+3832563 | MS.gene85168:CDS |
| ATGCTGCATGGAAACCTTCT+GGG | 0.419378 | 2.4:+3835511 | MS.gene85168:CDS |
| ATTGGCCATTGTTTCATTGT+CGG | 0.420209 | 2.4:-3834634 | None:intergenic |
| ACAAATTCTTATGAAATGAA+TGG | 0.425425 | 2.4:+3833759 | MS.gene85168:CDS |
| TCATACAATGATTCGTTGGC+TGG | 0.432210 | 2.4:-3833909 | None:intergenic |
| CACAAGACTCAAACTCAAAT+GGG | 0.432739 | 2.4:+3832385 | MS.gene85168:CDS |
| CGGTTAAAGCTTTATCAGAA+TGG | 0.434311 | 2.4:-3832303 | None:intergenic |
| TTCAGTTGATCAACTAAAAG+AGG | 0.439124 | 2.4:+3836622 | MS.gene85168:CDS |
| TGACAGAACATGAATAGTTA+AGG | 0.445167 | 2.4:-3832069 | None:intergenic |
| GGAAGAAACAGAGGACTTCA+AGG | 0.448661 | 2.4:+3834534 | MS.gene85168:intron |
| AGCTTCCTTTCTGTTCTGAA+GGG | 0.450978 | 2.4:-3837383 | None:intergenic |
| AACTATAAGTTGACCTCTAA+AGG | 0.451478 | 2.4:+3833696 | MS.gene85168:CDS |
| ATGGTGAACTAACATACTTC+AGG | 0.455560 | 2.4:+3834093 | MS.gene85168:CDS |
| GGCTGCAATAATGAGAATTT+GGG | 0.456812 | 2.4:+3832597 | MS.gene85168:CDS |
| TGAATCAAATTAAAAGGACT+TGG | 0.457350 | 2.4:+3832656 | MS.gene85168:CDS |
| CAACGTTGGAATTGAGAAGT+TGG | 0.460578 | 2.4:-3832264 | None:intergenic |
| AGAAATACATAGATTGGAAA+AGG | 0.471066 | 2.4:+3835326 | MS.gene85168:CDS |
| AAGTGTTGCTTCAAAGGTTG+AGG | 0.474601 | 2.4:+3832569 | MS.gene85168:CDS |
| TCGGTAGCTCACTTGAACTT+CGG | 0.479271 | 2.4:-3833827 | None:intergenic |
| TTACTTCCAGAAGTGGTACC+TGG | 0.480210 | 2.4:+3834017 | MS.gene85168:CDS |
| GGACAAAATGAGTTGGTAAA+GGG | 0.481242 | 2.4:-3834127 | None:intergenic |
| TGGTGGGGTTGGAGAAGAAG+AGG | 0.482517 | 2.4:-3832244 | None:intergenic |
| CATCGTTGTTAGGAATTGAA+AGG | 0.489962 | 2.4:-3832168 | None:intergenic |
| CTAAATGGTGGCTCAAATCC+AGG | 0.495188 | 2.4:-3834035 | None:intergenic |
| ATGTGTGAATAGACGAAGAC+TGG | 0.497375 | 2.4:+3833621 | MS.gene85168:intron |
| CTGGTTGGTAGTTCATATCA+TGG | 0.500912 | 2.4:-3833890 | None:intergenic |
| ATCGTTGTTAGGAATTGAAA+GGG | 0.505389 | 2.4:-3832167 | None:intergenic |
| AGGACAAAATGAGTTGGTAA+AGG | 0.510409 | 2.4:-3834128 | None:intergenic |
| GAGTTGCAGATTTGGTAGAG+AGG | 0.512746 | 2.4:+3835103 | MS.gene85168:CDS |
| ATCAAATTAAAAGGACTTGG+AGG | 0.513431 | 2.4:+3832659 | MS.gene85168:CDS |
| GTACTAGTGCCTTGTGGCAG+TGG | 0.514883 | 2.4:-3835213 | None:intergenic |
| AGGGAATGTTTCCGAAAGAT+GGG | 0.515126 | 2.4:+3835570 | MS.gene85168:CDS |
| GACCTCGCTTCATTGATTGG+TGG | 0.516515 | 2.4:+3833964 | MS.gene85168:CDS |
| TTTGGTAGAGAGGAGAGAGT+TGG | 0.517591 | 2.4:+3835113 | MS.gene85168:CDS |
| TGTAGATTTAAGCATTCCAC+TGG | 0.519150 | 2.4:+3835299 | MS.gene85168:CDS |
| AACTTCGGTCGGATTTATCC+CGG | 0.519731 | 2.4:-3833812 | None:intergenic |
| CCGGAGGTGTTCTGTTGTTG+CGG | 0.520036 | 2.4:+3835031 | MS.gene85168:CDS |
| TTCTGGGGAGGATGTAGACT+TGG | 0.520173 | 2.4:+3835527 | MS.gene85168:CDS |
| TTTGAGTTTGAGTCTTGTGA+AGG | 0.523941 | 2.4:-3832381 | None:intergenic |
| TGGAAGGACTACATCAGCAT+TGG | 0.537908 | 2.4:+3836498 | MS.gene85168:CDS |
| CCGGTAAAGATCACCTTTGG+TGG | 0.538848 | 2.4:-3833793 | None:intergenic |
| ACAATGATTCGTTGGCTGGT+TGG | 0.543719 | 2.4:-3833905 | None:intergenic |
| AATAATGACAGATGAGGAGA+GGG | 0.543945 | 2.4:+3835551 | MS.gene85168:CDS |
| TGCTGACTTACTTCCAGAAG+TGG | 0.546589 | 2.4:+3834010 | MS.gene85168:CDS |
| GAGTAAGAAGGATGCTCTTG+TGG | 0.546986 | 2.4:+3833659 | MS.gene85168:CDS |
| TACATCAGCATTGGAAACAC+AGG | 0.550297 | 2.4:+3836507 | MS.gene85168:CDS |
| GGAAGTAAGTCAGCATCTAC+CGG | 0.551218 | 2.4:-3834002 | None:intergenic |
| TGAAATGAATGGGGTGAAGT+TGG | 0.553356 | 2.4:+3833770 | MS.gene85168:CDS |
| GTTCAAGTGAGCTACCGAGC+TGG | 0.553928 | 2.4:+3833832 | MS.gene85168:CDS |
| ACCTTCTCATCTCTCTCCCA+TGG | 0.559826 | 2.4:-3832487 | None:intergenic |
| CGTTGGAATTGAGAAGTTGG+TGG | 0.561714 | 2.4:-3832261 | None:intergenic |
| AAGTCAGCATCTACCGGAAG+CGG | 0.561775 | 2.4:-3833996 | None:intergenic |
| GGAAACCCTTCAGAACAGAA+AGG | 0.562622 | 2.4:+3837378 | MS.gene85168:intron |
| ATAGACGAAGACTGGAGGCT+TGG | 0.562869 | 2.4:+3833629 | MS.gene85168:intron |
| CACCAAAGGTGATCTTTACC+GGG | 0.564622 | 2.4:+3833794 | MS.gene85168:CDS |
| TCAAATCCCCAACACCTCCA+TGG | 0.565297 | 2.4:+3832212 | MS.gene85168:CDS |
| CTTAATCCATGGAGGTGTTG+GGG | 0.565363 | 2.4:-3832218 | None:intergenic |
| TAGCTCACTTGAACTTCGGT+CGG | 0.568567 | 2.4:-3833823 | None:intergenic |
| CTATGTATTTCTGCTTCCAG+TGG | 0.569716 | 2.4:-3835315 | None:intergenic |
| AGAAGAGGAGCCTTAATCCA+TGG | 0.571644 | 2.4:-3832229 | None:intergenic |
| GGTTCTACGAAGATTGATAC+CGG | 0.571897 | 2.4:+3833717 | MS.gene85168:CDS |
| CCTCTCATACAATGATTCGT+TGG | 0.573304 | 2.4:-3833913 | None:intergenic |
| GTTGGAATTGAGAAGTTGGT+GGG | 0.573563 | 2.4:-3832260 | None:intergenic |
| CCAAAAGAAAAGCACTGCGC+AGG | 0.574059 | 2.4:+3836717 | MS.gene85168:CDS |
| AATCTGCAACTCTTATTGGA+AGG | 0.576182 | 2.4:-3835092 | None:intergenic |
| CCACTTGTACTAGTGCCTTG+TGG | 0.580623 | 2.4:-3835219 | None:intergenic |
| CTTGGTTGTATGGAGTAAGA+AGG | 0.580712 | 2.4:+3833647 | MS.gene85168:CDS |
| TATCAAAGTTAAATGCTGCA+TGG | 0.581587 | 2.4:+3835499 | MS.gene85168:CDS |
| AACAATGGCCAATGAACTGA+AGG | 0.583461 | 2.4:+3834644 | MS.gene85168:CDS |
| CCACAAGGCACTAGTACAAG+TGG | 0.584885 | 2.4:+3835219 | MS.gene85168:CDS |
| CCGCAACAACAGAACACCTC+CGG | 0.585239 | 2.4:-3835031 | None:intergenic |
| GAATGTGATAGATTATTGGA+TGG | 0.585774 | 2.4:+3833936 | MS.gene85168:CDS |
| CGATGCAGAGACTAATCAGT+CGG | 0.586060 | 2.4:+3836549 | MS.gene85168:CDS |
| CCAACGAATCATTGTATGAG+AGG | 0.586559 | 2.4:+3833913 | MS.gene85168:CDS |
| GGGGTGAAGTTGGCCACCAA+AGG | 0.586877 | 2.4:+3833780 | MS.gene85168:CDS |
| AAGTCTACATCCTCCCCAGA+AGG | 0.586977 | 2.4:-3835525 | None:intergenic |
| TCAGTTGATCAACTAAAAGA+GGG | 0.588894 | 2.4:+3836623 | MS.gene85168:CDS |
| GAAAATAGAGAGATCAACAA+TGG | 0.596405 | 2.4:+3835473 | MS.gene85168:CDS |
| AATAATGAGAATTTGGGTCA+AGG | 0.597299 | 2.4:+3832603 | MS.gene85168:CDS |
| GCCATGGGAGAGAGATGAGA+AGG | 0.598451 | 2.4:+3832486 | MS.gene85168:CDS |
| TCATGCTAGTGCAAAACTAA+CGG | 0.599022 | 2.4:+3834070 | MS.gene85168:CDS |
| GAGGACTAATGAGCTTGCCA+TGG | 0.601370 | 2.4:+3832678 | MS.gene85168:CDS |
| AAATACCGACAATGAAACAA+TGG | 0.604236 | 2.4:+3834629 | MS.gene85168:CDS |
| TTTACAATACAGCGTCTCAC+CGG | 0.606010 | 2.4:+3835012 | MS.gene85168:intron |
| GATGCAGAGACTAATCAGTC+GGG | 0.607705 | 2.4:+3836550 | MS.gene85168:CDS |
| GAGAAAAGAAAGAATGCCAT+GGG | 0.608902 | 2.4:+3832471 | MS.gene85168:CDS |
| GAAACACAGGGAAGTAGCAA+AGG | 0.609709 | 2.4:+3836520 | MS.gene85168:CDS |
| CAACGAATCATTGTATGAGA+GGG | 0.611730 | 2.4:+3833914 | MS.gene85168:CDS |
| CAGCTGCTATCTTAAAGCTG+TGG | 0.612102 | 2.4:+3834562 | MS.gene85168:CDS |
| TGAGAAAAGAAAGAATGCCA+TGG | 0.614089 | 2.4:+3832470 | MS.gene85168:CDS |
| ACAACGAGTGCAGGAAGGCG+AGG | 0.620373 | 2.4:+3836458 | MS.gene85168:intron |
| AAATAATGACAGATGAGGAG+AGG | 0.621976 | 2.4:+3835550 | MS.gene85168:CDS |
| CTTGGAAATAATGACAGATG+AGG | 0.623535 | 2.4:+3835545 | MS.gene85168:CDS |
| GCTTCAAAGGTTGAGGAGTG+AGG | 0.624670 | 2.4:+3832576 | MS.gene85168:CDS |
| AGGGATATCAAATTTAACCA+TGG | 0.630866 | 2.4:-3832695 | None:intergenic |
| TATGCTATTATTATTTACCG+CGG | 0.638178 | 2.4:+3836647 | MS.gene85168:CDS |
| TAGAGCAAGAGAAATTGTTG+AGG | 0.641903 | 2.4:+3832735 | MS.gene85168:CDS |
| CTACCAAGGACAAAATGAGT+TGG | 0.642184 | 2.4:-3834134 | None:intergenic |
| GCTAGTGCAAAACTAACGGA+TGG | 0.650095 | 2.4:+3834074 | MS.gene85168:CDS |
| GATGAATTTCCACTGCCACA+AGG | 0.650989 | 2.4:+3835204 | MS.gene85168:CDS |
| ACAATACAGCGTCTCACCGG+AGG | 0.657945 | 2.4:+3835015 | MS.gene85168:intron |
| TAATATGAAGGAAGAAACAG+AGG | 0.658565 | 2.4:+3834525 | MS.gene85168:intron |
| AAATTTGATGGAGAATGAGA+AGG | 0.659976 | 2.4:+3832444 | MS.gene85168:CDS |
| GATGCTCTTGTGGTTTACAG+AGG | 0.660691 | 2.4:+3833669 | MS.gene85168:CDS |
| TGCTGCATGGAAACCTTCTG+GGG | 0.661058 | 2.4:+3835512 | MS.gene85168:CDS |
| TTATGATCAGCATTCCAGCT+CGG | 0.662414 | 2.4:-3833846 | None:intergenic |
| ACGTTGTTTAGGTTCAACGT+TGG | 0.664634 | 2.4:-3832278 | None:intergenic |
| TGCATGGAAACCTTCTGGGG+AGG | 0.668732 | 2.4:+3835515 | MS.gene85168:CDS |
| GGTGGACAAATCCTAAATGG+TGG | 0.676773 | 2.4:-3834047 | None:intergenic |
| GTGAACTAACATACTTCAGG+AGG | 0.677696 | 2.4:+3834096 | MS.gene85168:CDS |
| TTGGAATTGAGAAGTTGGTG+GGG | 0.677831 | 2.4:-3832259 | None:intergenic |
| TGTGAATAGACGAAGACTGG+AGG | 0.684763 | 2.4:+3833624 | MS.gene85168:intron |
| AAATTCTTATGAAATGAATG+GGG | 0.694235 | 2.4:+3833761 | MS.gene85168:CDS |
| ATCCACCAATCAATGAAGCG+AGG | 0.697082 | 2.4:-3833966 | None:intergenic |
| AACTTGACGAAGAAGTTGCG+CGG | 0.705282 | 2.4:+3835151 | MS.gene85168:CDS |
| ACATCAGCATTGGAAACACA+GGG | 0.713546 | 2.4:+3836508 | MS.gene85168:CDS |
| AGAGGAGCCTTAATCCATGG+AGG | 0.743209 | 2.4:-3832226 | None:intergenic |
| TTAACCGGTAAAGAACTCAG+AGG | 0.763387 | 2.4:+3832319 | MS.gene85168:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATACATAATCTTAAAAA+GGG | + | chr2.4:3834279-3834298 | MS.gene85168:intron | 10.0% |
| !! | CTCTTAAATTAAATAATATA+TGG | + | chr2.4:3835434-3835453 | MS.gene85168:intron | 10.0% |
| !! | ATTCAATTAATCATAATTGT+TGG | - | chr2.4:3833123-3833142 | None:intergenic | 15.0% |
| !! | CAATATACATAATCTTAAAA+AGG | + | chr2.4:3834278-3834297 | MS.gene85168:intron | 15.0% |
| !! | TAAAACCAAAAAATCAAAAA+AGG | - | chr2.4:3835688-3835707 | None:intergenic | 15.0% |
| !! | TTAATGAAAAATACGTATAA+AGG | - | chr2.4:3836834-3836853 | None:intergenic | 15.0% |
| !! | TTGTATTAATTTCAAATGAT+TGG | + | chr2.4:3834791-3834810 | MS.gene85168:intron | 15.0% |
| !!! | AAATATTTTTTACAGATTCA+GGG | - | chr2.4:3835946-3835965 | None:intergenic | 15.0% |
| !!! | ATTAAAAGTTTGTCATTTTA+GGG | + | chr2.4:3836070-3836089 | MS.gene85168:intron | 15.0% |
| !!! | ATTTTCTATCTTTAATATGA+AGG | + | chr2.4:3834513-3834532 | MS.gene85168:intron | 15.0% |
| !!! | CTTTTTAAGATTATGTATAT+TGG | - | chr2.4:3834280-3834299 | None:intergenic | 15.0% |
| !!! | TAAATATTTTTTACAGATTC+AGG | - | chr2.4:3835947-3835966 | None:intergenic | 15.0% |
| !! | AAAATACGTATAAAGGAAAT+AGG | - | chr2.4:3836827-3836846 | None:intergenic | 20.0% |
| !! | AAATTCTTATGAAATGAATG+GGG | + | chr2.4:3833761-3833780 | MS.gene85168:CDS | 20.0% |
| !! | AACATCAAAGTTATTCTTAT+TGG | - | chr2.4:3834993-3835012 | None:intergenic | 20.0% |
| !! | ACAAATTCTTATGAAATGAA+TGG | + | chr2.4:3833759-3833778 | MS.gene85168:CDS | 20.0% |
| !! | ATAAGGAAATCATAATTAGT+TGG | + | chr2.4:3834392-3834411 | MS.gene85168:intron | 20.0% |
| !! | ATGTTGTGAATCAAATTAAA+AGG | + | chr2.4:3832650-3832669 | MS.gene85168:CDS | 20.0% |
| !! | CAAATTCTTATGAAATGAAT+GGG | + | chr2.4:3833760-3833779 | MS.gene85168:CDS | 20.0% |
| !! | CGTAAAAAATGTTATATTGT+CGG | + | chr2.4:3833149-3833168 | MS.gene85168:intron | 20.0% |
| !! | GTAAAAATTTCTCAATGATT+AGG | - | chr2.4:3835780-3835799 | None:intergenic | 20.0% |
| !! | TACAGACAATATTCATTTAA+AGG | + | chr2.4:3837176-3837195 | MS.gene85168:intron | 20.0% |
| !! | TTTGGAAAGATAAGTATTAA+TGG | - | chr2.4:3836377-3836396 | None:intergenic | 20.0% |
| !!! | AAAATGACAAACTTTTAATC+AGG | - | chr2.4:3836069-3836088 | None:intergenic | 20.0% |
| !!! | AGTTTTACATACTACTATAT+AGG | + | chr2.4:3835058-3835077 | MS.gene85168:CDS | 20.0% |
| !!! | ATCATTGAGAAATTTTTACA+AGG | + | chr2.4:3835781-3835800 | MS.gene85168:intron | 20.0% |
| !!! | CAAGAATAATTGATTTAAGA+AGG | + | chr2.4:3834348-3834367 | MS.gene85168:intron | 20.0% |
| !!! | GAGATTCTTTTTACAATTTT+AGG | + | chr2.4:3837357-3837376 | MS.gene85168:intron | 20.0% |
| !!! | GATTAAAAGTTTGTCATTTT+AGG | + | chr2.4:3836069-3836088 | MS.gene85168:intron | 20.0% |
| !!! | GTTTTACATACTACTATATA+GGG | + | chr2.4:3835059-3835078 | MS.gene85168:CDS | 20.0% |
| !!! | TAAATATAATAGCAGCATTT+TGG | - | chr2.4:3836395-3836414 | None:intergenic | 20.0% |
| !!! | TATCCATATTTTGACATAAA+GGG | - | chr2.4:3832717-3832736 | None:intergenic | 20.0% |
| !!! | TATGTATATTGGTAACTATT+TGG | - | chr2.4:3834269-3834288 | None:intergenic | 20.0% |
| !!! | TTATAATACTGATAATGTAG+AGG | - | chr2.4:3835918-3835937 | None:intergenic | 20.0% |
| !!! | TTTTACATACTACTATATAG+GGG | + | chr2.4:3835060-3835079 | MS.gene85168:CDS | 20.0% |
| ! | AATTTCGTCCTTATTATTGT+AGG | - | chr2.4:3836142-3836161 | None:intergenic | 25.0% |
| ! | ACAGAATATAACAAATGCAA+AGG | - | chr2.4:3835410-3835429 | None:intergenic | 25.0% |
| ! | AGAAATACATAGATTGGAAA+AGG | + | chr2.4:3835326-3835345 | MS.gene85168:CDS | 25.0% |
| ! | ATTAAAGAACTGCATCAATA+AGG | - | chr2.4:3834166-3834185 | None:intergenic | 25.0% |
| ! | CACTATATATTTATGACGAT+GGG | - | chr2.4:3837134-3837153 | None:intergenic | 25.0% |
| ! | CAGAATATAACAAATGCAAA+GGG | - | chr2.4:3835409-3835428 | None:intergenic | 25.0% |
| ! | CTAATCTAAACAAACATTGT+TGG | - | chr2.4:3834862-3834881 | None:intergenic | 25.0% |
| ! | CTCAAAAAGTTGAAAACTTT+GGG | + | chr2.4:3832410-3832429 | MS.gene85168:CDS | 25.0% |
| ! | CTCAATCAGTAACTTTAATA+AGG | + | chr2.4:3834375-3834394 | MS.gene85168:intron | 25.0% |
| ! | CTGGAAATGTGTATATAAAT+GGG | + | chr2.4:3833362-3833381 | MS.gene85168:intron | 25.0% |
| ! | GTGATACCATCTTAAAATTT+AGG | - | chr2.4:3833401-3833420 | None:intergenic | 25.0% |
| ! | TAAATGAAATCATATGACCA+TGG | - | chr2.4:3835748-3835767 | None:intergenic | 25.0% |
| ! | TAACAATGTGTTTATAAGTG+AGG | - | chr2.4:3832989-3833008 | None:intergenic | 25.0% |
| ! | TACAATAATAAGGACGAAAT+TGG | + | chr2.4:3836141-3836160 | MS.gene85168:intron | 25.0% |
| ! | TATCAATTTAGTTGTCAACA+CGG | - | chr2.4:3836319-3836338 | None:intergenic | 25.0% |
| ! | TATCCATCACATAATATAGA+AGG | - | chr2.4:3833585-3833604 | None:intergenic | 25.0% |
| ! | TATCCCTTTATGTCAAAATA+TGG | + | chr2.4:3832711-3832730 | MS.gene85168:CDS | 25.0% |
| ! | TATGCTATTATTATTTACCG+CGG | + | chr2.4:3836647-3836666 | MS.gene85168:CDS | 25.0% |
| ! | TCACTATATATTTATGACGA+TGG | - | chr2.4:3837135-3837154 | None:intergenic | 25.0% |
| ! | TCTCAAAAAGTTGAAAACTT+TGG | + | chr2.4:3832409-3832428 | MS.gene85168:CDS | 25.0% |
| ! | TGAATCAAATTAAAAGGACT+TGG | + | chr2.4:3832656-3832675 | MS.gene85168:CDS | 25.0% |
| ! | TTGTAAATTAGTAAATGCTC+TGG | + | chr2.4:3834415-3834434 | MS.gene85168:intron | 25.0% |
| !! | TGGTAGTTTGTAATTATCAA+AGG | - | chr2.4:3835812-3835831 | None:intergenic | 25.0% |
| !! | TGTTTTATATTCAATAGTCG+CGG | + | chr2.4:3834892-3834911 | MS.gene85168:intron | 25.0% |
| !!! | ATAATTTTAGGGACCAAAAT+GGG | - | chr2.4:3835878-3835897 | None:intergenic | 25.0% |
| !!! | CATCTTAAAATTTAGGTTGA+GGG | - | chr2.4:3833394-3833413 | None:intergenic | 25.0% |
| !!! | CTATCCATATTTTGACATAA+AGG | - | chr2.4:3832718-3832737 | None:intergenic | 25.0% |
| !!! | TAAGAATTTGTTTTTCGACT+AGG | - | chr2.4:3833750-3833769 | None:intergenic | 25.0% |
| !!! | TATAATTTTAGGGACCAAAA+TGG | - | chr2.4:3835879-3835898 | None:intergenic | 25.0% |
| !!! | TATTGATAATGCAGAGTATT+AGG | + | chr2.4:3836106-3836125 | MS.gene85168:intron | 25.0% |
| !!! | TCATTTTCAAGCATAGATAT+TGG | - | chr2.4:3836972-3836991 | None:intergenic | 25.0% |
| !!! | TCCTAGTTTTGATTGAAAAT+TGG | + | chr2.4:3836798-3836817 | MS.gene85168:intron | 25.0% |
| !!! | TGATTTTTTGAAGGTGAAAA+AGG | + | chr2.4:3832510-3832529 | MS.gene85168:CDS | 25.0% |
| !!! | TGTGACCTTTTTTGATTTTT+TGG | + | chr2.4:3835680-3835699 | MS.gene85168:intron | 25.0% |
| !!! | TTGACTTGTAGATAGTTATT+CGG | + | chr2.4:3833539-3833558 | MS.gene85168:intron | 25.0% |
| !!! | TTGATGGTCGTATAATTTTA+GGG | - | chr2.4:3835889-3835908 | None:intergenic | 25.0% |
| AAAGCTTTCATTGTGAGATT+TGG | + | chr2.4:3835369-3835388 | MS.gene85168:intron | 30.0% | |
| AAATACCGACAATGAAACAA+TGG | + | chr2.4:3834629-3834648 | MS.gene85168:CDS | 30.0% | |
| AAATGGGTATTTAATCTACC+CGG | - | chr2.4:3835862-3835881 | None:intergenic | 30.0% | |
| AAATTTGATGGAGAATGAGA+AGG | + | chr2.4:3832444-3832463 | MS.gene85168:CDS | 30.0% | |
| AAGAATCTCAGTTATACAGT+AGG | - | chr2.4:3837346-3837365 | None:intergenic | 30.0% | |
| AATAATGAGAATTTGGGTCA+AGG | + | chr2.4:3832603-3832622 | MS.gene85168:CDS | 30.0% | |
| ACATACTAGCAAAACTAGTT+TGG | - | chr2.4:3833213-3833232 | None:intergenic | 30.0% | |
| ACATTATCATCATCGTTGTT+AGG | - | chr2.4:3832181-3832200 | None:intergenic | 30.0% | |
| AGGGATATCAAATTTAACCA+TGG | - | chr2.4:3832698-3832717 | None:intergenic | 30.0% | |
| ATCAAATTAAAAGGACTTGG+AGG | + | chr2.4:3832659-3832678 | MS.gene85168:CDS | 30.0% | |
| ATCGTTGTTAGGAATTGAAA+GGG | - | chr2.4:3832170-3832189 | None:intergenic | 30.0% | |
| ATTCAACGAGTTAGTTATAG+AGG | - | chr2.4:3833269-3833288 | None:intergenic | 30.0% | |
| CATCCTTCTATATTATGTGA+TGG | + | chr2.4:3833579-3833598 | MS.gene85168:intron | 30.0% | |
| CTGATACCATGTTAAACTTT+GGG | + | chr2.4:3832916-3832935 | MS.gene85168:intron | 30.0% | |
| GAAAATAGAGAGATCAACAA+TGG | + | chr2.4:3835473-3835492 | MS.gene85168:CDS | 30.0% | |
| GAATGTGATAGATTATTGGA+TGG | + | chr2.4:3833936-3833955 | MS.gene85168:CDS | 30.0% | |
| GATAGATTATTGGATGGTTT+AGG | + | chr2.4:3833942-3833961 | MS.gene85168:CDS | 30.0% | |
| GCAAAAATTGCAATCAAGTA+TGG | + | chr2.4:3834600-3834619 | MS.gene85168:CDS | 30.0% | |
| GCTGGAAATGTGTATATAAA+TGG | + | chr2.4:3833361-3833380 | MS.gene85168:intron | 30.0% | |
| GTGGAACTTTAACAGAATTT+AGG | + | chr2.4:3835238-3835257 | MS.gene85168:CDS | 30.0% | |
| TAAAACTACACCCTAAGTTT+AGG | - | chr2.4:3834719-3834738 | None:intergenic | 30.0% | |
| TAATATGAAGGAAGAAACAG+AGG | + | chr2.4:3834525-3834544 | MS.gene85168:intron | 30.0% | |
| TAATTAGCCATATGCATACA+AGG | - | chr2.4:3834489-3834508 | None:intergenic | 30.0% | |
| TATCAAAGTTAAATGCTGCA+TGG | + | chr2.4:3835499-3835518 | MS.gene85168:CDS | 30.0% | |
| TCAGTTGATCAACTAAAAGA+GGG | + | chr2.4:3836623-3836642 | MS.gene85168:CDS | 30.0% | |
| TCTCTCTGTTGATATTTGTA+GGG | + | chr2.4:3835980-3835999 | MS.gene85168:intron | 30.0% | |
| TCTGATACCATGTTAAACTT+TGG | + | chr2.4:3832915-3832934 | MS.gene85168:intron | 30.0% | |
| TGACAGAACATGAATAGTTA+AGG | - | chr2.4:3832072-3832091 | None:intergenic | 30.0% | |
| TGCAAGATATCCTAAACTTA+GGG | + | chr2.4:3834706-3834725 | MS.gene85168:intron | 30.0% | |
| TTAGGAATTGAAAGGGAATT+GGG | - | chr2.4:3832163-3832182 | None:intergenic | 30.0% | |
| TTCAGTTGATCAACTAAAAG+AGG | + | chr2.4:3836622-3836641 | MS.gene85168:CDS | 30.0% | |
| TTGTGTATTAGTTCATGTAC+TGG | + | chr2.4:3834945-3834964 | MS.gene85168:intron | 30.0% | |
| TTTATGCTTGATGCTGAAAA+GGG | + | chr2.4:3834231-3834250 | MS.gene85168:intron | 30.0% | |
| ! | AACTATAAGTTGACCTCTAA+AGG | + | chr2.4:3833696-3833715 | MS.gene85168:CDS | 30.0% |
| ! | CATCTACACTTCACAATTTT+TGG | + | chr2.4:3836574-3836593 | MS.gene85168:CDS | 30.0% |
| ! | CATTCTGATAAAGCTTTAAC+CGG | + | chr2.4:3832304-3832323 | MS.gene85168:CDS | 30.0% |
| ! | GAAACACGACACTTATATTT+TGG | + | chr2.4:3837235-3837254 | MS.gene85168:intron | 30.0% |
| ! | GCCAATTTTCAATCAAAACT+AGG | - | chr2.4:3836802-3836821 | None:intergenic | 30.0% |
| ! | GGTAGATTAAATACCCATTT+TGG | + | chr2.4:3835862-3835881 | MS.gene85168:intron | 30.0% |
| ! | GTCTAGTTTGGAAAATTTGA+TGG | + | chr2.4:3832432-3832451 | MS.gene85168:CDS | 30.0% |
| ! | TACTGATAATGTAGAGGAAT+AGG | - | chr2.4:3835912-3835931 | None:intergenic | 30.0% |
| ! | TCATTTCGTCAAGCTTATTT+TGG | - | chr2.4:3835269-3835288 | None:intergenic | 30.0% |
| ! | TTTTATGCTTGATGCTGAAA+AGG | + | chr2.4:3834230-3834249 | MS.gene85168:intron | 30.0% |
| ! | TTTTCGACTAGGAATATAAC+CGG | - | chr2.4:3833739-3833758 | None:intergenic | 30.0% |
| ! | TTTTTCGCTATCTTTTCTGA+CGG | - | chr2.4:3836689-3836708 | None:intergenic | 30.0% |
| !! | AATTGGGTTTGTTGTGATTA+AGG | - | chr2.4:3832147-3832166 | None:intergenic | 30.0% |
| !! | ACGACACTTATATTTTGGAA+CGG | + | chr2.4:3837240-3837259 | MS.gene85168:intron | 30.0% |
| !! | CCATCTTAAAATTTAGGTTG+AGG | - | chr2.4:3833395-3833414 | None:intergenic | 30.0% |
| !! | CCTCAACCTAAATTTTAAGA+TGG | + | chr2.4:3833392-3833411 | MS.gene85168:intron | 30.0% |
| !! | GTTTTCTGGTCAAATGAAAA+GGG | - | chr2.4:3837297-3837316 | None:intergenic | 30.0% |
| !! | TTGATAAAGTGTTGCTTCAA+AGG | + | chr2.4:3832563-3832582 | MS.gene85168:CDS | 30.0% |
| !! | TTTACTTTTCATTGTGTGTG+AGG | + | chr2.4:3834683-3834702 | MS.gene85168:intron | 30.0% |
| !! | TTTGTGGGCTATTTTCTTTA+AGG | - | chr2.4:3832353-3832372 | None:intergenic | 30.0% |
| !!! | GTTGATGGTCGTATAATTTT+AGG | - | chr2.4:3835890-3835909 | None:intergenic | 30.0% |
| !!! | TGAGAAGGTTGATTTTTTGA+AGG | + | chr2.4:3832501-3832520 | MS.gene85168:CDS | 30.0% |
| AAAGAACTGCATCAATAAGG+AGG | - | chr2.4:3834163-3834182 | None:intergenic | 35.0% | |
| AAATAATGACAGATGAGGAG+AGG | + | chr2.4:3835550-3835569 | MS.gene85168:CDS | 35.0% | |
| AAGAACTGCATCAATAAGGA+GGG | - | chr2.4:3834162-3834181 | None:intergenic | 35.0% | |
| AATAATGACAGATGAGGAGA+GGG | + | chr2.4:3835551-3835570 | MS.gene85168:CDS | 35.0% | |
| AATCTGCAACTCTTATTGGA+AGG | - | chr2.4:3835095-3835114 | None:intergenic | 35.0% | |
| AATCTTCGTAGAACCTTTAG+AGG | - | chr2.4:3833712-3833731 | None:intergenic | 35.0% | |
| ACCAAATCTGCAACTCTTAT+TGG | - | chr2.4:3835099-3835118 | None:intergenic | 35.0% | |
| ACTACCACTTAGTTACAATG+TGG | + | chr2.4:3835825-3835844 | MS.gene85168:intron | 35.0% | |
| AGAGCTTATCCGAAATATGT+TGG | - | chr2.4:3832898-3832917 | None:intergenic | 35.0% | |
| AGGCTGCAATAATGAGAATT+TGG | + | chr2.4:3832596-3832615 | MS.gene85168:CDS | 35.0% | |
| ATGCTCCAAATGTATATGTG+AGG | - | chr2.4:3832829-3832848 | None:intergenic | 35.0% | |
| ATGGTGAACTAACATACTTC+AGG | + | chr2.4:3834093-3834112 | MS.gene85168:CDS | 35.0% | |
| ATTGGCCATTGTTTCATTGT+CGG | - | chr2.4:3834637-3834656 | None:intergenic | 35.0% | |
| CAACGAATCATTGTATGAGA+GGG | + | chr2.4:3833914-3833933 | MS.gene85168:CDS | 35.0% | |
| CACAAGACTCAAACTCAAAT+GGG | + | chr2.4:3832385-3832404 | MS.gene85168:CDS | 35.0% | |
| CATCGTTGTTAGGAATTGAA+AGG | - | chr2.4:3832171-3832190 | None:intergenic | 35.0% | |
| CTCTCTCTGTTGATATTTGT+AGG | + | chr2.4:3835979-3835998 | MS.gene85168:intron | 35.0% | |
| CTTAAAAGTCATACAGATGC+TGG | - | chr2.4:3833066-3833085 | None:intergenic | 35.0% | |
| CTTAGAGTGGGAAATATTAC+AGG | - | chr2.4:3836426-3836445 | None:intergenic | 35.0% | |
| CTTGGAAATAATGACAGATG+AGG | + | chr2.4:3835545-3835564 | MS.gene85168:CDS | 35.0% | |
| GAGAAAAGAAAGAATGCCAT+GGG | + | chr2.4:3832471-3832490 | MS.gene85168:CDS | 35.0% | |
| GAGCTTATCCGAAATATGTT+GGG | - | chr2.4:3832897-3832916 | None:intergenic | 35.0% | |
| GAGGGAATGTGATAGATTAT+TGG | + | chr2.4:3833932-3833951 | MS.gene85168:CDS | 35.0% | |
| GATAAGAGTAGAGAGAAAGA+AGG | - | chr2.4:3832765-3832784 | None:intergenic | 35.0% | |
| GGAAGCAGAAATACATAGAT+TGG | + | chr2.4:3835320-3835339 | MS.gene85168:CDS | 35.0% | |
| GGCTGCAATAATGAGAATTT+GGG | + | chr2.4:3832597-3832616 | MS.gene85168:CDS | 35.0% | |
| GTATCTGTACTTAACCACAA+CGG | + | chr2.4:3836271-3836290 | MS.gene85168:intron | 35.0% | |
| GTCTAACCCAAAGTTTAACA+TGG | - | chr2.4:3832925-3832944 | None:intergenic | 35.0% | |
| GTGCAAGATATCCTAAACTT+AGG | + | chr2.4:3834705-3834724 | MS.gene85168:intron | 35.0% | |
| GTTAGGAATTGAAAGGGAAT+TGG | - | chr2.4:3832164-3832183 | None:intergenic | 35.0% | |
| TAATACACAAGCCAAAAGAG+CGG | - | chr2.4:3834935-3834954 | None:intergenic | 35.0% | |
| TAGAGCAAGAGAAATTGTTG+AGG | + | chr2.4:3832735-3832754 | MS.gene85168:CDS | 35.0% | |
| TATCCTTCCTTGTATGCATA+TGG | + | chr2.4:3834479-3834498 | MS.gene85168:intron | 35.0% | |
| TCACAAGACTCAAACTCAAA+TGG | + | chr2.4:3832384-3832403 | MS.gene85168:CDS | 35.0% | |
| TCATCTTCAATCCCATCTTT+CGG | - | chr2.4:3835584-3835603 | None:intergenic | 35.0% | |
| TCATGCTAGTGCAAAACTAA+CGG | + | chr2.4:3834070-3834089 | MS.gene85168:CDS | 35.0% | |
| TCCAATAAGAGTTGCAGATT+TGG | + | chr2.4:3835095-3835114 | MS.gene85168:CDS | 35.0% | |
| TCCAATCAAAACTCAAGAAG+TGG | - | chr2.4:3835643-3835662 | None:intergenic | 35.0% | |
| TCTCTTGAAATGCAGAGAAT+TGG | + | chr2.4:3836740-3836759 | MS.gene85168:CDS | 35.0% | |
| TGAAAACTTTGGGTCTAGTT+TGG | + | chr2.4:3832420-3832439 | MS.gene85168:CDS | 35.0% | |
| TGAATGTAGCTTCTTAGAGT+GGG | - | chr2.4:3836438-3836457 | None:intergenic | 35.0% | |
| TGAGAAAAGAAAGAATGCCA+TGG | + | chr2.4:3832470-3832489 | MS.gene85168:CDS | 35.0% | |
| TGCTCCAAATGTATATGTGA+GGG | - | chr2.4:3832828-3832847 | None:intergenic | 35.0% | |
| TGTAGATTTAAGCATTCCAC+TGG | + | chr2.4:3835299-3835318 | MS.gene85168:CDS | 35.0% | |
| TGTCAAGTTCCGCATTAAAT+GGG | + | chr2.4:3833332-3833351 | MS.gene85168:intron | 35.0% | |
| TTATGCTTGATGCTGAAAAG+GGG | + | chr2.4:3834232-3834251 | MS.gene85168:intron | 35.0% | |
| TTCATTTGACCAGAAAACGT+GGG | + | chr2.4:3837299-3837318 | MS.gene85168:intron | 35.0% | |
| TTCCGCATTAAATGGGATAT+GGG | + | chr2.4:3833339-3833358 | MS.gene85168:intron | 35.0% | |
| TTCTTAGCAATTCAATGCCA+TGG | + | chr2.4:3835728-3835747 | MS.gene85168:intron | 35.0% | |
| TTGAATGTAGCTTCTTAGAG+TGG | - | chr2.4:3836439-3836458 | None:intergenic | 35.0% | |
| TTGTCAAGTTCCGCATTAAA+TGG | + | chr2.4:3833331-3833350 | MS.gene85168:intron | 35.0% | |
| TTTAACCCGTGAAAAAACCT+AGG | - | chr2.4:3837051-3837070 | None:intergenic | 35.0% | |
| TTTAATAACGACACAACCAG+AGG | + | chr2.4:3836037-3836056 | MS.gene85168:intron | 35.0% | |
| TTTCATTTGACCAGAAAACG+TGG | + | chr2.4:3837298-3837317 | MS.gene85168:intron | 35.0% | |
| ! | AAAGTGACTTGATAGCATAG+GGG | + | chr2.4:3832853-3832872 | MS.gene85168:intron | 35.0% |
| ! | AATGTAGAGGAATAGGTTGA+TGG | - | chr2.4:3835905-3835924 | None:intergenic | 35.0% |
| ! | CAAAGTGACTTGATAGCATA+GGG | + | chr2.4:3832852-3832871 | MS.gene85168:intron | 35.0% |
| ! | CAGCATCTGTATGACTTTTA+AGG | + | chr2.4:3833064-3833083 | MS.gene85168:intron | 35.0% |
| ! | CGGTTAAAGCTTTATCAGAA+TGG | - | chr2.4:3832306-3832325 | None:intergenic | 35.0% |
| ! | GCAGTTTTTACCTTACAAGT+CGG | - | chr2.4:3832806-3832825 | None:intergenic | 35.0% |
| ! | TAATGCAGAGTATTAGGTTG+AGG | + | chr2.4:3836112-3836131 | MS.gene85168:intron | 35.0% |
| ! | TCAAAGTGACTTGATAGCAT+AGG | + | chr2.4:3832851-3832870 | MS.gene85168:intron | 35.0% |
| ! | TTACCAACTCATTTTGTCCT+TGG | + | chr2.4:3834131-3834150 | MS.gene85168:CDS | 35.0% |
| ! | TTTGAGTTTGAGTCTTGTGA+AGG | - | chr2.4:3832384-3832403 | None:intergenic | 35.0% |
| !! | AAGTTGTCTAGTTCTTGGTA+AGG | + | chr2.4:3835605-3835624 | MS.gene85168:intron | 35.0% |
| !! | AGGACAAAATGAGTTGGTAA+AGG | - | chr2.4:3834131-3834150 | None:intergenic | 35.0% |
| !! | ATGAGAAGTTGTCTAGTTCT+TGG | + | chr2.4:3835600-3835619 | MS.gene85168:CDS | 35.0% |
| !! | CGTTTTCTGGTCAAATGAAA+AGG | - | chr2.4:3837298-3837317 | None:intergenic | 35.0% |
| !! | GATAATTCCTCTGAAGTTGT+TGG | - | chr2.4:3836214-3836233 | None:intergenic | 35.0% |
| !! | GGACAAAATGAGTTGGTAAA+GGG | - | chr2.4:3834130-3834149 | None:intergenic | 35.0% |
| !! | TCCACTTCTTGAGTTTTGAT+TGG | + | chr2.4:3835639-3835658 | MS.gene85168:intron | 35.0% |
| !! | TTAGATGAGTGATGGACTAA+TGG | - | chr2.4:3833014-3833033 | None:intergenic | 35.0% |
| !! | TTAGTAAATGCTCTGGAGTA+TGG | + | chr2.4:3834422-3834441 | MS.gene85168:intron | 35.0% |
| !!! | CACTTATATTTTGGAACGGA+AGG | + | chr2.4:3837244-3837263 | MS.gene85168:intron | 35.0% |
| !!! | CAGGCAAATCAGTTTTGAAT+GGG | - | chr2.4:3836870-3836889 | None:intergenic | 35.0% |
| AACAATGGCCAATGAACTGA+AGG | + | chr2.4:3834644-3834663 | MS.gene85168:CDS | 40.0% | |
| AAGTTATACTTGCTCCGTTG+TGG | - | chr2.4:3836288-3836307 | None:intergenic | 40.0% | |
| ACCACTTAGTTACAATGTGG+AGG | + | chr2.4:3835828-3835847 | MS.gene85168:intron | 40.0% | |
| ACCGCGGAAAAAACTATAGT+CGG | + | chr2.4:3836663-3836682 | MS.gene85168:CDS | 40.0% | |
| ACTGCCCTCACATATACATT+TGG | + | chr2.4:3832821-3832840 | MS.gene85168:intron | 40.0% | |
| AGAATCCATCCAAGATTCGT+TGG | + | chr2.4:3833425-3833444 | MS.gene85168:intron | 40.0% | |
| AGCCCATATCCCATTTAATG+CGG | - | chr2.4:3833344-3833363 | None:intergenic | 40.0% | |
| AGGGAATGTTTCCGAAAGAT+GGG | + | chr2.4:3835570-3835589 | MS.gene85168:CDS | 40.0% | |
| AGTCCATCACTCATCTAATG+TGG | + | chr2.4:3833016-3833035 | MS.gene85168:intron | 40.0% | |
| ATAGTCCAACGAATCTTGGA+TGG | - | chr2.4:3833433-3833452 | None:intergenic | 40.0% | |
| ATCAATCTACAGCGCATACA+TGG | + | chr2.4:3834308-3834327 | MS.gene85168:intron | 40.0% | |
| ATGTGTGAATAGACGAAGAC+TGG | + | chr2.4:3833621-3833640 | MS.gene85168:intron | 40.0% | |
| CAACGTTGGAATTGAGAAGT+TGG | - | chr2.4:3832267-3832286 | None:intergenic | 40.0% | |
| CATACAAGGAAGGATAAGCA+TGG | - | chr2.4:3834475-3834494 | None:intergenic | 40.0% | |
| CCAACGAATCATTGTATGAG+AGG | + | chr2.4:3833913-3833932 | MS.gene85168:CDS | 40.0% | |
| CCACTTAGTTACAATGTGGA+GGG | + | chr2.4:3835829-3835848 | MS.gene85168:intron | 40.0% | |
| CCTCTCATACAATGATTCGT+TGG | - | chr2.4:3833916-3833935 | None:intergenic | 40.0% | |
| CTACCAAGGACAAAATGAGT+TGG | - | chr2.4:3834137-3834156 | None:intergenic | 40.0% | |
| CTTGGTTGTATGGAGTAAGA+AGG | + | chr2.4:3833647-3833666 | MS.gene85168:CDS | 40.0% | |
| GACGATGGGTGATAACTATA+AGG | - | chr2.4:3837120-3837139 | None:intergenic | 40.0% | |
| GAGGCGATCCTACAATAATA+AGG | + | chr2.4:3836131-3836150 | MS.gene85168:intron | 40.0% | |
| GGAAAAAATTGTCACTGCTG+CGG | + | chr2.4:3832531-3832550 | MS.gene85168:CDS | 40.0% | |
| GGTTCTACGAAGATTGATAC+CGG | + | chr2.4:3833717-3833736 | MS.gene85168:CDS | 40.0% | |
| GTCCATCACTCATCTAATGT+GGG | + | chr2.4:3833017-3833036 | MS.gene85168:intron | 40.0% | |
| GTGAACTAACATACTTCAGG+AGG | + | chr2.4:3834096-3834115 | MS.gene85168:CDS | 40.0% | |
| GTTCCGCATTAAATGGGATA+TGG | + | chr2.4:3833338-3833357 | MS.gene85168:intron | 40.0% | |
| TAGCCATATGCATACAAGGA+AGG | - | chr2.4:3834485-3834504 | None:intergenic | 40.0% | |
| TCAGAATGGTCACGTTGTTT+AGG | - | chr2.4:3832292-3832311 | None:intergenic | 40.0% | |
| TCATACAATGATTCGTTGGC+TGG | - | chr2.4:3833912-3833931 | None:intergenic | 40.0% | |
| TCCATCACTCATCTAATGTG+GGG | + | chr2.4:3833018-3833037 | MS.gene85168:intron | 40.0% | |
| TGAAATGAATGGGGTGAAGT+TGG | + | chr2.4:3833770-3833789 | MS.gene85168:CDS | 40.0% | |
| TGAGGTGGACAAATCCTAAA+TGG | - | chr2.4:3834053-3834072 | None:intergenic | 40.0% | |
| TGGGTCAAGGTTAAGAAATC+AGG | + | chr2.4:3832616-3832635 | MS.gene85168:CDS | 40.0% | |
| TTAACCGGTAAAGAACTCAG+AGG | + | chr2.4:3832319-3832338 | MS.gene85168:CDS | 40.0% | |
| TTATGATCAGCATTCCAGCT+CGG | - | chr2.4:3833849-3833868 | None:intergenic | 40.0% | |
| TTCTTGATACCGATACTGCT+AGG | - | chr2.4:3834334-3834353 | None:intergenic | 40.0% | |
| TTTACAATACAGCGTCTCAC+CGG | + | chr2.4:3835012-3835031 | MS.gene85168:intron | 40.0% | |
| TTTGCCTCTGAGTTCTTTAC+CGG | - | chr2.4:3832326-3832345 | None:intergenic | 40.0% | |
| ! | ACATCAGCATTGGAAACACA+GGG | + | chr2.4:3836508-3836527 | MS.gene85168:CDS | 40.0% |
| ! | ACGTTGTTTAGGTTCAACGT+TGG | - | chr2.4:3832281-3832300 | None:intergenic | 40.0% |
| ! | AGCTTCCTTTCTGTTCTGAA+GGG | - | chr2.4:3837386-3837405 | None:intergenic | 40.0% |
| ! | CATAAAGAGCATGACCAAAG+TGG | - | chr2.4:3833467-3833486 | None:intergenic | 40.0% |
| ! | CCTTACAAGTCGACTTTCTA+AGG | - | chr2.4:3832957-3832976 | None:intergenic | 40.0% |
| ! | CTATGTATTTCTGCTTCCAG+TGG | - | chr2.4:3835318-3835337 | None:intergenic | 40.0% |
| ! | CTCTGATTTGAAGCTGAAAC+TGG | + | chr2.4:3836940-3836959 | MS.gene85168:CDS | 40.0% |
| ! | GTTGGAATTGAGAAGTTGGT+GGG | - | chr2.4:3832263-3832282 | None:intergenic | 40.0% |
| ! | GTTTTCATACTGCGTTGAGT+TGG | + | chr2.4:3834767-3834786 | MS.gene85168:intron | 40.0% |
| ! | TACATCAGCATTGGAAACAC+AGG | + | chr2.4:3836507-3836526 | MS.gene85168:CDS | 40.0% |
| ! | TGAAGTTGTTGGTTAGGCAA+AGG | - | chr2.4:3836203-3836222 | None:intergenic | 40.0% |
| !! | AAGTGTTGCTTCAAAGGTTG+AGG | + | chr2.4:3832569-3832588 | MS.gene85168:CDS | 40.0% |
| !! | ACAGATGCTGGTTTGCAATT+GGG | - | chr2.4:3833054-3833073 | None:intergenic | 40.0% |
| !! | AGTGTCAAAACCGACTTGTA+AGG | + | chr2.4:3832793-3832812 | MS.gene85168:intron | 40.0% |
| !! | CAATTTTTGGAGAGAGAGAG+CGG | + | chr2.4:3836587-3836606 | MS.gene85168:CDS | 40.0% |
| !! | CCTTAGAAAGTCGACTTGTA+AGG | + | chr2.4:3832954-3832973 | MS.gene85168:intron | 40.0% |
| !! | CGACTTTCTAAGGTTCAGTT+AGG | - | chr2.4:3832947-3832966 | None:intergenic | 40.0% |
| !! | CTGGTTGGTAGTTCATATCA+TGG | - | chr2.4:3833893-3833912 | None:intergenic | 40.0% |
| !! | GTGAAGGCTTTCAAGTTTGT+GGG | - | chr2.4:3832368-3832387 | None:intergenic | 40.0% |
| !! | TACAGATGCTGGTTTGCAAT+TGG | - | chr2.4:3833055-3833074 | None:intergenic | 40.0% |
| !! | TGTGAAGGCTTTCAAGTTTG+TGG | - | chr2.4:3832369-3832388 | None:intergenic | 40.0% |
| !! | TTCCTCTGAAGTTGTTGGTT+AGG | - | chr2.4:3836209-3836228 | None:intergenic | 40.0% |
| !! | TTGGAATTGAGAAGTTGGTG+GGG | - | chr2.4:3832262-3832281 | None:intergenic | 40.0% |
| !!! | GCAGGCAAATCAGTTTTGAA+TGG | - | chr2.4:3836871-3836890 | None:intergenic | 40.0% |
| !!! | GTTAGTTTTGCACTAGCATG+AGG | - | chr2.4:3834071-3834090 | None:intergenic | 40.0% |
| AACTTCGGTCGGATTTATCC+CGG | - | chr2.4:3833815-3833834 | None:intergenic | 45.0% | |
| AACTTGACGAAGAAGTTGCG+CGG | + | chr2.4:3835151-3835170 | MS.gene85168:CDS | 45.0% | |
| AATGCTGCATGGAAACCTTC+TGG | + | chr2.4:3835510-3835529 | MS.gene85168:CDS | 45.0% | |
| ACCCGTGAAAAAACCTAGGA+CGG | - | chr2.4:3837047-3837066 | None:intergenic | 45.0% | |
| AGAAGAGGAGCCTTAATCCA+TGG | - | chr2.4:3832232-3832251 | None:intergenic | 45.0% | |
| AGGCAAAGGTTTCTCGAAAG+CGG | - | chr2.4:3836189-3836208 | None:intergenic | 45.0% | |
| ATCCACCAATCAATGAAGCG+AGG | - | chr2.4:3833969-3833988 | None:intergenic | 45.0% | |
| ATCCCGGTAAAGATCACCTT+TGG | - | chr2.4:3833799-3833818 | None:intergenic | 45.0% | |
| ATGCTGCATGGAAACCTTCT+GGG | + | chr2.4:3835511-3835530 | MS.gene85168:CDS | 45.0% | |
| ATTCAACAACGAGTGCAGGA+AGG | + | chr2.4:3836453-3836472 | MS.gene85168:intron | 45.0% | |
| CACCAAAGGTGATCTTTACC+GGG | + | chr2.4:3833794-3833813 | MS.gene85168:CDS | 45.0% | |
| CAGCTGCTATCTTAAAGCTG+TGG | + | chr2.4:3834562-3834581 | MS.gene85168:CDS | 45.0% | |
| CAGCTTCCTTTCTGTTCTGA+AGG | - | chr2.4:3837387-3837406 | None:intergenic | 45.0% | |
| CATACATGGCCTAGCAGTAT+CGG | + | chr2.4:3834322-3834341 | MS.gene85168:intron | 45.0% | |
| CCACCAAAGGTGATCTTTAC+CGG | + | chr2.4:3833793-3833812 | MS.gene85168:CDS | 45.0% | |
| CCCTCCACATTGTAACTAAG+TGG | - | chr2.4:3835832-3835851 | None:intergenic | 45.0% | |
| CGATGCAGAGACTAATCAGT+CGG | + | chr2.4:3836549-3836568 | MS.gene85168:CDS | 45.0% | |
| CGTTGGAATTGAGAAGTTGG+TGG | - | chr2.4:3832264-3832283 | None:intergenic | 45.0% | |
| CTAAATGGTGGCTCAAATCC+AGG | - | chr2.4:3834038-3834057 | None:intergenic | 45.0% | |
| CTACATTCAACAACGAGTGC+AGG | + | chr2.4:3836449-3836468 | MS.gene85168:intron | 45.0% | |
| CTGGATTTGAGCCACCATTT+AGG | + | chr2.4:3834036-3834055 | MS.gene85168:CDS | 45.0% | |
| GAAACACAGGGAAGTAGCAA+AGG | + | chr2.4:3836520-3836539 | MS.gene85168:CDS | 45.0% | |
| GAGACTTGCCTTCAGTTCAT+TGG | - | chr2.4:3834655-3834674 | None:intergenic | 45.0% | |
| GAGGGAATGTTTCCGAAAGA+TGG | + | chr2.4:3835569-3835588 | MS.gene85168:CDS | 45.0% | |
| GAGTAAGAAGGATGCTCTTG+TGG | + | chr2.4:3833659-3833678 | MS.gene85168:CDS | 45.0% | |
| GATGAATTTCCACTGCCACA+AGG | + | chr2.4:3835204-3835223 | MS.gene85168:CDS | 45.0% | |
| GATGCAGAGACTAATCAGTC+GGG | + | chr2.4:3836550-3836569 | MS.gene85168:CDS | 45.0% | |
| GATGCTCTTGTGGTTTACAG+AGG | + | chr2.4:3833669-3833688 | MS.gene85168:CDS | 45.0% | |
| GCAGATGGCCCAACATATTT+CGG | + | chr2.4:3832886-3832905 | MS.gene85168:intron | 45.0% | |
| GCATTAAATGGGATATGGGC+TGG | + | chr2.4:3833343-3833362 | MS.gene85168:intron | 45.0% | |
| GCTAGTGCAAAACTAACGGA+TGG | + | chr2.4:3834074-3834093 | MS.gene85168:CDS | 45.0% | |
| GGAAACCCTTCAGAACAGAA+AGG | + | chr2.4:3837378-3837397 | MS.gene85168:intron | 45.0% | |
| GGAAGAAACAGAGGACTTCA+AGG | + | chr2.4:3834534-3834553 | MS.gene85168:intron | 45.0% | |
| GGAAGTAAGTCAGCATCTAC+CGG | - | chr2.4:3834005-3834024 | None:intergenic | 45.0% | |
| GGTGGACAAATCCTAAATGG+TGG | - | chr2.4:3834050-3834069 | None:intergenic | 45.0% | |
| TAGCTCACTTGAACTTCGGT+CGG | - | chr2.4:3833826-3833845 | None:intergenic | 45.0% | |
| TAGGACCTCGCTTCATTGAT+TGG | + | chr2.4:3833961-3833980 | MS.gene85168:CDS | 45.0% | |
| TCAAATCCAGGTACCACTTC+TGG | - | chr2.4:3834026-3834045 | None:intergenic | 45.0% | |
| TCAATGACTGCAACAACAGC+AGG | - | chr2.4:3836889-3836908 | None:intergenic | 45.0% | |
| TCCCCACATTAGATGAGTGA+TGG | - | chr2.4:3833022-3833041 | None:intergenic | 45.0% | |
| TCGGTAGCTCACTTGAACTT+CGG | - | chr2.4:3833830-3833849 | None:intergenic | 45.0% | |
| TGCCTAACCAACAACTTCAG+AGG | + | chr2.4:3836204-3836223 | MS.gene85168:intron | 45.0% | |
| TGGAAGGACTACATCAGCAT+TGG | + | chr2.4:3836498-3836517 | MS.gene85168:CDS | 45.0% | |
| TGTGAATAGACGAAGACTGG+AGG | + | chr2.4:3833624-3833643 | MS.gene85168:intron | 45.0% | |
| TTACTTCCAGAAGTGGTACC+TGG | + | chr2.4:3834017-3834036 | MS.gene85168:CDS | 45.0% | |
| TTCGTTGGACTATCCGCTAT+CGG | + | chr2.4:3833440-3833459 | MS.gene85168:intron | 45.0% | |
| TTTGGTAGAGAGGAGAGAGT+TGG | + | chr2.4:3835113-3835132 | MS.gene85168:CDS | 45.0% | |
| ! | AATGTGGAGGGTGTAAATCC+GGG | + | chr2.4:3835841-3835860 | MS.gene85168:intron | 45.0% |
| ! | ACAATGATTCGTTGGCTGGT+TGG | - | chr2.4:3833908-3833927 | None:intergenic | 45.0% |
| ! | AGGAGTTTTCGACGGTGTAT+TGG | + | chr2.4:3836478-3836497 | MS.gene85168:CDS | 45.0% |
| ! | AGTTTTGCACTAGCATGAGG+TGG | - | chr2.4:3834068-3834087 | None:intergenic | 45.0% |
| ! | ATCTTGAAGCCCACGTTTTC+TGG | - | chr2.4:3837311-3837330 | None:intergenic | 45.0% |
| ! | CAATGTGGAGGGTGTAAATC+CGG | + | chr2.4:3835840-3835859 | MS.gene85168:intron | 45.0% |
| ! | GAGTTGCAGATTTGGTAGAG+AGG | + | chr2.4:3835103-3835122 | MS.gene85168:CDS | 45.0% |
| ! | GTTTTCGACGGTGTATTGGA+AGG | + | chr2.4:3836482-3836501 | MS.gene85168:CDS | 45.0% |
| !! | AATTGAGAAGTTGGTGGGGT+TGG | - | chr2.4:3832258-3832277 | None:intergenic | 45.0% |
| !! | CAATAAGGAGGGTACTACCA+AGG | - | chr2.4:3834151-3834170 | None:intergenic | 45.0% |
| !! | CCTTAATCCATGGAGGTGTT+GGG | - | chr2.4:3832222-3832241 | None:intergenic | 45.0% |
| !! | CTTAATCCATGGAGGTGTTG+GGG | - | chr2.4:3832221-3832240 | None:intergenic | 45.0% |
| !! | TGCTGACTTACTTCCAGAAG+TGG | + | chr2.4:3834010-3834029 | MS.gene85168:CDS | 45.0% |
| !!! | GCCGACTATAGTTTTTTCCG+CGG | - | chr2.4:3836667-3836686 | None:intergenic | 45.0% |
| !!! | TGCCGTCCTAGGTTTTTTCA+CGG | + | chr2.4:3837042-3837061 | MS.gene85168:intron | 45.0% |
| AAGTCAGCATCTACCGGAAG+CGG | - | chr2.4:3833999-3834018 | None:intergenic | 50.0% | |
| AAGTCTACATCCTCCCCAGA+AGG | - | chr2.4:3835528-3835547 | None:intergenic | 50.0% | |
| ACCTTCTCATCTCTCTCCCA+TGG | - | chr2.4:3832490-3832509 | None:intergenic | 50.0% | |
| AGAGGAGCCTTAATCCATGG+AGG | - | chr2.4:3832229-3832248 | None:intergenic | 50.0% | |
| AGGGGATAGCTGATAGCAGA+TGG | + | chr2.4:3832871-3832890 | MS.gene85168:intron | 50.0% | |
| ATAGACGAAGACTGGAGGCT+TGG | + | chr2.4:3833629-3833648 | MS.gene85168:intron | 50.0% | |
| CCACTTGTACTAGTGCCTTG+TGG | - | chr2.4:3835222-3835241 | None:intergenic | 50.0% | |
| CCGGTAAAGATCACCTTTGG+TGG | - | chr2.4:3833796-3833815 | None:intergenic | 50.0% | |
| GAGGACTAATGAGCTTGCCA+TGG | + | chr2.4:3832678-3832697 | MS.gene85168:CDS | 50.0% | |
| GCGGATAGTCCAACGAATCT+TGG | - | chr2.4:3833437-3833456 | None:intergenic | 50.0% | |
| GCTTCAAAGGTTGAGGAGTG+AGG | + | chr2.4:3832576-3832595 | MS.gene85168:CDS | 50.0% | |
| TCAAATCCCCAACACCTCCA+TGG | + | chr2.4:3832212-3832231 | MS.gene85168:CDS | 50.0% | |
| TCCAAAATAGCTGCCGTCCT+AGG | + | chr2.4:3837031-3837050 | MS.gene85168:intron | 50.0% | |
| TCGTTGGACTATCCGCTATC+GGG | + | chr2.4:3833441-3833460 | MS.gene85168:intron | 50.0% | |
| TGCTGCATGGAAACCTTCTG+GGG | + | chr2.4:3835512-3835531 | MS.gene85168:CDS | 50.0% | |
| ! | ACCTAGGACGGCAGCTATTT+TGG | - | chr2.4:3837035-3837054 | None:intergenic | 50.0% |
| ! | AGACTGGAGGCTTGGTTGTA+TGG | + | chr2.4:3833637-3833656 | MS.gene85168:CDS | 50.0% |
| ! | CCACAAGGCACTAGTACAAG+TGG | + | chr2.4:3835219-3835238 | MS.gene85168:CDS | 50.0% |
| ! | CCCAACACCTCCATGGATTA+AGG | + | chr2.4:3832219-3832238 | MS.gene85168:CDS | 50.0% |
| ! | CCTGCGCAGTGCTTTTCTTT+TGG | - | chr2.4:3836720-3836739 | None:intergenic | 50.0% |
| ! | GACCTCGCTTCATTGATTGG+TGG | + | chr2.4:3833964-3833983 | MS.gene85168:CDS | 50.0% |
| ! | GCCTTAATCCATGGAGGTGT+TGG | - | chr2.4:3832223-3832242 | None:intergenic | 50.0% |
| ! | TTCTGGGGAGGATGTAGACT+TGG | + | chr2.4:3835527-3835546 | MS.gene85168:CDS | 50.0% |
| !! | CCAAAAGAAAAGCACTGCGC+AGG | + | chr2.4:3836717-3836736 | MS.gene85168:CDS | 50.0% |
| !! | TTTTTGGAGAGAGAGAGCGG+CGG | + | chr2.4:3836590-3836609 | MS.gene85168:CDS | 50.0% |
| !!! | GCCGTCCTAGGTTTTTTCAC+GGG | + | chr2.4:3837043-3837062 | MS.gene85168:intron | 50.0% |
| ACAATACAGCGTCTCACCGG+AGG | + | chr2.4:3835015-3835034 | MS.gene85168:intron | 55.0% | |
| CCGCAACAACAGAACACCTC+CGG | - | chr2.4:3835034-3835053 | None:intergenic | 55.0% | |
| GCCATGGGAGAGAGATGAGA+AGG | + | chr2.4:3832486-3832505 | MS.gene85168:CDS | 55.0% | |
| GTACTAGTGCCTTGTGGCAG+TGG | - | chr2.4:3835216-3835235 | None:intergenic | 55.0% | |
| GTGGATGCACAAACCGCTTC+CGG | + | chr2.4:3833983-3834002 | MS.gene85168:CDS | 55.0% | |
| GTTCAAGTGAGCTACCGAGC+TGG | + | chr2.4:3833832-3833851 | MS.gene85168:CDS | 55.0% | |
| TATCCGCTATCGGGCCACTT+TGG | + | chr2.4:3833450-3833469 | MS.gene85168:intron | 55.0% | |
| TGACCAAAGTGGCCCGATAG+CGG | - | chr2.4:3833456-3833475 | None:intergenic | 55.0% | |
| TGGTGGGGTTGGAGAAGAAG+AGG | - | chr2.4:3832247-3832266 | None:intergenic | 55.0% | |
| ! | CATAGACTGCGCCGCTCTTT+TGG | + | chr2.4:3834921-3834940 | MS.gene85168:intron | 55.0% |
| ! | GGAAGGCGAGGAGTTTTCGA+CGG | + | chr2.4:3836470-3836489 | MS.gene85168:intron | 55.0% |
| ! | TGCATGGAAACCTTCTGGGG+AGG | + | chr2.4:3835515-3835534 | MS.gene85168:CDS | 55.0% |
| !! | CCGGAGGTGTTCTGTTGTTG+CGG | + | chr2.4:3835031-3835050 | MS.gene85168:CDS | 55.0% |
| ACAACGAGTGCAGGAAGGCG+AGG | + | chr2.4:3836458-3836477 | MS.gene85168:intron | 60.0% | |
| GGGGTGAAGTTGGCCACCAA+AGG | + | chr2.4:3833780-3833799 | MS.gene85168:CDS | 60.0% | |
| GTTTCTCGAAAGCGGCGCTG+CGG | - | chr2.4:3836181-3836200 | None:intergenic | 60.0% | |
| TTTCTCGAAAGCGGCGCTGC+GGG | - | chr2.4:3836180-3836199 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 3832061 | 3837429 | 3832061 | ID=MS.gene85168 |
| chr2.4 | mRNA | 3832061 | 3837429 | 3832061 | ID=MS.gene85168.t1;Parent=MS.gene85168 |
| chr2.4 | exon | 3832061 | 3832756 | 3832061 | ID=MS.gene85168.t1.exon1;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3832061 | 3832756 | 3832061 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3833633 | 3834152 | 3833633 | ID=MS.gene85168.t1.exon2;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3833633 | 3834152 | 3833633 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3834535 | 3834665 | 3834535 | ID=MS.gene85168.t1.exon3;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3834535 | 3834665 | 3834535 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3835024 | 3835380 | 3835024 | ID=MS.gene85168.t1.exon4;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3835024 | 3835380 | 3835024 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3835465 | 3835621 | 3835465 | ID=MS.gene85168.t1.exon5;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3835465 | 3835621 | 3835465 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3836471 | 3836763 | 3836471 | ID=MS.gene85168.t1.exon6;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3836471 | 3836763 | 3836471 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3836902 | 3836961 | 3836902 | ID=MS.gene85168.t1.exon7;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3836902 | 3836961 | 3836902 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| chr2.4 | exon | 3837379 | 3837429 | 3837379 | ID=MS.gene85168.t1.exon8;Parent=MS.gene85168.t1 |
| chr2.4 | CDS | 3837379 | 3837429 | 3837379 | ID=cds.MS.gene85168.t1;Parent=MS.gene85168.t1 |
| Gene Sequence |
| Protein sequence |
