AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066426


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066426.t1 MTR_8g030840 95.113 532 25 1 1 532 1 531 0.0 973
MS.gene066426.t1 MTR_8g446970 92.481 266 19 1 78 343 1 265 8.43e-166 470
MS.gene066426.t1 MTR_4g081725 51.000 100 27 2 265 364 1 78 1.11e-13 66.6
MS.gene066426.t1 MTR_4g081620 52.381 84 29 3 357 437 5 80 2.22e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066426.t1 AT1G31870 54.974 573 202 19 2 532 3 561 6.62e-169 490
MS.gene066426.t1 AT1G31870 54.974 573 202 19 2 532 3 561 6.62e-169 490

Find 133 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAGAGATTGACAGAAAA+AGG 0.256770 8.1:+72083429 MS.gene066426:CDS
AATGGGATCTAACTCATTAA+AGG 0.275049 8.1:+72082349 None:intergenic
AAAATATGAAACTTCTGATT+TGG 0.275171 8.1:+72083133 MS.gene066426:CDS
CATTTCGAACCCTCTGTTTA+CGG 0.284042 8.1:-72082773 None:intergenic
AGCTGTTTCACATCAATCTT+TGG 0.286796 8.1:+72083307 MS.gene066426:CDS
GAAGTTGAAGTATTCAATTC+AGG 0.293414 8.1:-72082816 None:intergenic
TGACTTTACATATTCCTCTT+TGG 0.296143 8.1:-72084744 None:intergenic
CTCTTCAACCAGCTATGATT+TGG 0.315542 8.1:-72087198 None:intergenic
TTCATCAACTTGTCAAGTTC+AGG 0.318505 8.1:-72086949 None:intergenic
GTATTCAATTCAGGTGGTTC+TGG 0.330517 8.1:-72082807 None:intergenic
ATTTCGAACCCTCTGTTTAC+GGG 0.334458 8.1:-72082772 None:intergenic
CACTATGCTGGCGTCTCCGT+GGG 0.345494 8.1:-72083241 None:intergenic
GAACGTGACTCACAACATTC+TGG 0.345666 8.1:+72082906 MS.gene066426:CDS
AAGACAAAGAAGCTTATCTT+TGG 0.359041 8.1:+72087452 MS.gene066426:CDS
ATCTGATGTTTCTCATCGTT+CGG 0.364599 8.1:+72083280 MS.gene066426:CDS
AACTCCTTTGAATTCTTCCT+TGG 0.381872 8.1:-72083347 None:intergenic
AGTGATAAAATGAGGGAATC+TGG 0.400500 8.1:+72087153 MS.gene066426:CDS
GAATGTTGTGAGTCACGTTC+AGG 0.401905 8.1:-72082903 None:intergenic
GGCCTTATCCCATACCGGTT+TGG 0.407057 8.1:-72087237 None:intergenic
TCCTTTGAATTCTTCCTTGG+TGG 0.410270 8.1:-72083344 None:intergenic
AGAGCCTGTTCTTCCAAACT+TGG 0.417046 8.1:+72087125 MS.gene066426:CDS
TTCAGGAGATTAAAATAGAA+TGG 0.420897 8.1:+72086034 MS.gene066426:intron
CGGCGAGGAGACGAAATATC+TGG 0.423302 8.1:-72083074 None:intergenic
AACAGGTTTAATTTCTGGTA+AGG 0.424018 8.1:+72083400 MS.gene066426:CDS
CGTAGTAGTCATCAAACATT+TGG 0.425842 8.1:+72083095 MS.gene066426:CDS
TCAGGAGATTAAAATAGAAT+GGG 0.426044 8.1:+72086035 MS.gene066426:intron
GATGAAGGAGAGGGTAAGAT+GGG 0.428301 8.1:+72086966 MS.gene066426:CDS
CTCCAAACCGGTATGGGATA+AGG 0.439707 8.1:+72087235 MS.gene066426:CDS
TTTCTTTCATGAACAGATGC+TGG 0.447074 8.1:-72083377 None:intergenic
GCATACCTGGTCCGCGCAAA+AGG 0.455986 8.1:-72086126 None:intergenic
TGATGAAGGAGAGGGTAAGA+TGG 0.456909 8.1:+72086965 MS.gene066426:CDS
AAAACTCAACCACAACCAAC+TGG 0.460869 8.1:+72082437 MS.gene066426:CDS
GAGCCTGTTCTTCCAAACTT+GGG 0.463185 8.1:+72087126 MS.gene066426:CDS
ATCTGAGGATGGAAGTGGTT+GGG 0.465979 8.1:+72082719 MS.gene066426:CDS
AGATCTTTCTCCACCTAGAC+GGG 0.466078 8.1:+72083157 MS.gene066426:CDS
CATCAAACATTTGGATCCAA+TGG 0.468004 8.1:+72083104 MS.gene066426:CDS
GGATAAGGCCGGGACGACAC+TGG 0.471920 8.1:+72087250 MS.gene066426:CDS
AAGATCTACGGGCTTCTGCC+AGG 0.476674 8.1:-72082486 None:intergenic
GCGCCGCGGCCACTGATGAC+AGG 0.477012 8.1:-72084291 None:intergenic
GGTAAGATGGGGTGATCCTA+TGG 0.477138 8.1:+72086978 MS.gene066426:CDS
GTTTCAACTGCCGGCGCGAA+GGG 0.477453 8.1:-72082863 None:intergenic
AATTCAGGTGGTTCTGGTGA+AGG 0.487081 8.1:-72082801 None:intergenic
GAAAACGATGACAAATTGTC+AGG 0.490234 8.1:+72082515 MS.gene066426:CDS
AAGTTTGGAAGAACAGGCTC+TGG 0.491230 8.1:-72087123 None:intergenic
CAAGGGCCTTGCTCAAAAGC+GGG 0.491703 8.1:+72086059 MS.gene066426:CDS
CGTTTCAACTGCCGGCGCGA+AGG 0.492486 8.1:-72082864 None:intergenic
GAAGCTGCTCCAAACCGGTA+TGG 0.496486 8.1:+72087228 MS.gene066426:CDS
TCGATCTTGCCACACTATGC+TGG 0.503889 8.1:-72083253 None:intergenic
GATGTATCATTATTTGAAAG+TGG 0.503959 8.1:-72082744 None:intergenic
GATAAGGCCGGGACGACACT+GGG 0.506196 8.1:+72087251 MS.gene066426:CDS
TTTATGCAGATTTAAACTGA+TGG 0.520282 8.1:+72084266 MS.gene066426:intron
ACACCATCCCAGTGTCGTCC+CGG 0.521413 8.1:-72087258 None:intergenic
GTTTAGAAGCTGCTCCAAAC+CGG 0.522757 8.1:+72087223 MS.gene066426:CDS
AAGATATTCCAAATCATAGC+TGG 0.523457 8.1:+72087190 MS.gene066426:CDS
GACCCTGTCATCAGTGGCCG+CGG 0.524151 8.1:+72084288 MS.gene066426:CDS
TATCTGAGGATGGAAGTGGT+TGG 0.525213 8.1:+72082718 MS.gene066426:CDS
ATCAAACATTTGGATCCAAT+GGG 0.525277 8.1:+72083105 MS.gene066426:CDS
TTCATGAACAGATGCTGGAA+TGG 0.525490 8.1:-72083372 None:intergenic
AAGCTGCTCCAAACCGGTAT+GGG 0.528693 8.1:+72087229 MS.gene066426:CDS
AACCGGTATGGGATAAGGCC+GGG 0.528901 8.1:+72087240 MS.gene066426:CDS
AAACCGGTATGGGATAAGGC+CGG 0.531807 8.1:+72087239 MS.gene066426:CDS
AGCCTGTTCTTCCAAACTTG+GGG 0.533247 8.1:+72087127 MS.gene066426:CDS
ACTAACAAGCCAGTTGGTTG+TGG 0.533522 8.1:-72082446 None:intergenic
TCAATGTCTTCGTCAACTAT+CGG 0.535277 8.1:-72082639 None:intergenic
AAAGGAACTAGAAGTTGAGA+AGG 0.540761 8.1:+72086098 MS.gene066426:CDS
TGCTCAAAAGCGGGAAGCTG+AGG 0.540947 8.1:+72086068 MS.gene066426:CDS
ACACTATGCTGGCGTCTCCG+TGG 0.542123 8.1:-72083242 None:intergenic
AACTTTGATCTAGACGACCT+TGG 0.542912 8.1:-72082999 None:intergenic
GTCCCGGCCTTATCCCATAC+CGG 0.545051 8.1:-72087242 None:intergenic
TGTCATAGCGTTTCAACTGC+CGG 0.549131 8.1:-72082872 None:intergenic
TCCTATGGCACATCTAGTAA+AGG 0.551319 8.1:+72086993 MS.gene066426:CDS
CTGATTTATCCCCTTCGCGC+CGG 0.552001 8.1:+72082853 MS.gene066426:CDS
GAATCATGACGACCCCGTCT+AGG 0.557815 8.1:-72083170 None:intergenic
AATTCTTCCTTGGTGGAGAG+AGG 0.560682 8.1:-72083337 None:intergenic
TCTACGGGCTTCTGCCAGGT+TGG 0.560783 8.1:-72082482 None:intergenic
GCAAGGGCCTTGCTCAAAAG+CGG 0.562182 8.1:+72086058 MS.gene066426:CDS
CGCCGCGGCCACTGATGACA+GGG 0.562637 8.1:-72084290 None:intergenic
TGTGAGTCACGTTCAGGTGA+TGG 0.562870 8.1:-72082897 None:intergenic
TGAACTTGACAAGTTGATGA+AGG 0.563576 8.1:+72086951 MS.gene066426:CDS
TACTTCAACTTCTAATAGAA+CGG 0.565037 8.1:+72082827 MS.gene066426:CDS
CTTGCTTGTAGGGTTCGAGA+AGG 0.565979 8.1:+72087396 MS.gene066426:intron
CCCTCTCAAGATACTTCACA+TGG 0.566960 8.1:+72083194 MS.gene066426:CDS
CTATGATTTGGAATATCTTG+AGG 0.568331 8.1:-72087186 None:intergenic
AAGATCTTTCTCCACCTAGA+CGG 0.569728 8.1:+72083156 MS.gene066426:CDS
ACCTTTACTAGATGTGCCAT+AGG 0.576652 8.1:-72086994 None:intergenic
TATCATGATATATCTGAGGA+TGG 0.581118 8.1:+72082708 MS.gene066426:CDS
GGAAGCTGAGGCTAAGCTAA+AGG 0.586960 8.1:+72086080 MS.gene066426:CDS
GTTGAAGTATTCAATTCAGG+TGG 0.592694 8.1:-72082813 None:intergenic
CTCTGATCTCTGCGTTTACG+AGG 0.593733 8.1:-72082954 None:intergenic
ACTATGCTGGCGTCTCCGTG+GGG 0.596116 8.1:-72083240 None:intergenic
TTTCGAACCCTCTGTTTACG+GGG 0.600987 8.1:-72082771 None:intergenic
GAAGAGGCTTGAGCAGCTGA+AGG 0.601622 8.1:+72082674 MS.gene066426:CDS
AAAGGAAGGATGATTTGTTG+AGG 0.606723 8.1:+72083447 MS.gene066426:CDS
TTGAAGTAAAGCGTATGAAG+AGG 0.608828 8.1:+72082658 MS.gene066426:CDS
ATCTCCACCCCGTAAACAGA+GGG 0.611906 8.1:+72082764 MS.gene066426:CDS
TCCATGTGAAGTATCTTGAG+AGG 0.614015 8.1:-72083195 None:intergenic
CGAACCCTCTGTTTACGGGG+TGG 0.614227 8.1:-72082768 None:intergenic
AATCATAGCTGGTTGAAGAG+AGG 0.614397 8.1:+72087201 MS.gene066426:CDS
ACGGAGACGCCAGCATAGTG+TGG 0.617724 8.1:+72083244 MS.gene066426:CDS
GATATATCTGAGGATGGAAG+TGG 0.619295 8.1:+72082714 MS.gene066426:CDS
GCCTGTTCTTCCAAACTTGG+GGG 0.620674 8.1:+72087128 MS.gene066426:CDS
GCTGTATATCGTGATAACAA+AGG 0.621454 8.1:+72084318 MS.gene066426:CDS
TGCTTATCATGATATATCTG+AGG 0.621619 8.1:+72082704 MS.gene066426:CDS
CAAATGTTTGATGACTACTA+CGG 0.621652 8.1:-72083094 None:intergenic
TTGACAAGTTGATGAAGGAG+AGG 0.621996 8.1:+72086956 MS.gene066426:CDS
TGACAAGTTGATGAAGGAGA+GGG 0.629012 8.1:+72086957 MS.gene066426:CDS
GATTAAAATAGAATGGGGCA+AGG 0.630157 8.1:+72086041 MS.gene066426:CDS
TCATGACGACCCCGTCTAGG+TGG 0.631201 8.1:-72083167 None:intergenic
GTGATATGTCACCTCCTCGA+CGG 0.632218 8.1:+72083030 MS.gene066426:CDS
CAGCTGTAGCTCGTGAACCA+AGG 0.632250 8.1:+72082982 MS.gene066426:CDS
TTTCAACTGCCGGCGCGAAG+GGG 0.633334 8.1:-72082862 None:intergenic
AGGCCGGGACGACACTGGGA+TGG 0.633533 8.1:+72087255 MS.gene066426:CDS
CCATGTGAAGTATCTTGAGA+GGG 0.634499 8.1:-72083194 None:intergenic
TCCACCAAGGAAGAATTCAA+AGG 0.639037 8.1:+72083343 MS.gene066426:CDS
TCTACAACTAACAAGCCAGT+TGG 0.639771 8.1:-72082452 None:intergenic
GAAAGTAGACGATAAGCCCA+AGG 0.642092 8.1:+72084772 MS.gene066426:CDS
CTGATGGACCCTGTCATCAG+TGG 0.642703 8.1:+72084282 MS.gene066426:CDS
GATGGTGTTGATCGTAGTAA+TGG 0.643375 8.1:+72087273 MS.gene066426:CDS
CAGGAGATTAAAATAGAATG+GGG 0.643441 8.1:+72086036 MS.gene066426:intron
AGGAGGACGCATTACCAAAG+AGG 0.643800 8.1:+72084730 MS.gene066426:intron
CTATGCTGGCGTCTCCGTGG+GGG 0.645093 8.1:-72083239 None:intergenic
TGATCTCTGCGTTTACGAGG+AGG 0.653399 8.1:-72082951 None:intergenic
TTGTAGACGAAGATCCAACC+TGG 0.659373 8.1:+72082468 MS.gene066426:CDS
ATGAAGGAGAGGGTAAGATG+GGG 0.660443 8.1:+72086967 MS.gene066426:CDS
CTAACATGTTTCCGTCGAGG+AGG 0.668711 8.1:-72083041 None:intergenic
ATTAAAATAGAATGGGGCAA+GGG 0.673281 8.1:+72086042 MS.gene066426:CDS
CATCTCCACCCCGTAAACAG+AGG 0.674052 8.1:+72082763 MS.gene066426:CDS
TTACTAACATGTTTCCGTCG+AGG 0.680614 8.1:-72083044 None:intergenic
CGTGACTCACAACATTCTGG+CGG 0.689644 8.1:+72082909 MS.gene066426:CDS
ACAGTGACCTCTCTCCACCA+AGG 0.703277 8.1:+72083330 MS.gene066426:CDS
GATCTTTCTCCACCTAGACG+GGG 0.716893 8.1:+72083158 MS.gene066426:CDS
GATATACAGCTTCAGCGCCG+CGG 0.720082 8.1:-72084305 None:intergenic
GTTTGATGACTACTACGGCG+AGG 0.740108 8.1:-72083089 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAGTCTATATTATTTTTT+AGG + chr8.1:72085136-72085155 MS.gene066426:intron 10.0%
!!! TTGAAAAAATTTAAAATAGA+GGG - chr8.1:72084883-72084902 None:intergenic 10.0%
!!! TTTGAAAAAATTTAAAATAG+AGG - chr8.1:72084884-72084903 None:intergenic 10.0%
!! AATCTAATAGATAAAAATAG+AGG - chr8.1:72085538-72085557 None:intergenic 15.0%
!! AATTTGTGTTTATGTTATAT+GGG + chr8.1:72085163-72085182 MS.gene066426:intron 15.0%
!! ATATTTAAGTGAACAAAATA+TGG - chr8.1:72084921-72084940 None:intergenic 15.0%
!! ATCTAATAGATAAAAATAGA+GGG - chr8.1:72085537-72085556 None:intergenic 15.0%
!! GGAAAATAAAAAAAAAGAAA+TGG + chr8.1:72084470-72084489 MS.gene066426:intron 15.0%
!!! AATTTAATTCCTTAGTTTTT+AGG + chr8.1:72083826-72083845 MS.gene066426:intron 15.0%
!!! ATTTAATTCCTTAGTTTTTA+GGG + chr8.1:72083827-72083846 MS.gene066426:intron 15.0%
!!! CTAGACATATATATTTTTAT+TGG - chr8.1:72084144-72084163 None:intergenic 15.0%
!!! TAACATTATTTTATTAGATG+AGG + chr8.1:72082611-72082630 MS.gene066426:intron 15.0%
!!! TATAGACTTAAATACAATTT+TGG - chr8.1:72085127-72085146 None:intergenic 15.0%
!! AAAATAGAATTACAACGTTA+TGG - chr8.1:72083557-72083576 None:intergenic 20.0%
!! AAAATATGAAACTTCTGATT+TGG + chr8.1:72083133-72083152 MS.gene066426:CDS 20.0%
!! ACACTTAATAAGAAAGTAAA+AGG - chr8.1:72086213-72086232 None:intergenic 20.0%
!! ATCACTCAAAAAATAACTAA+AGG - chr8.1:72084854-72084873 None:intergenic 20.0%
!! ATGTTAATGAAGTACATATT+AGG + chr8.1:72085358-72085377 MS.gene066426:intron 20.0%
!! CAATTTGTGTTTATGTTATA+TGG + chr8.1:72085162-72085181 MS.gene066426:intron 20.0%
!! CATATAACATAAACACAAAT+TGG - chr8.1:72085164-72085183 None:intergenic 20.0%
!! CATTAAGCAAGAATATTATT+GGG - chr8.1:72083534-72083553 None:intergenic 20.0%
!! CTATTAGATTATCTTTCATT+TGG + chr8.1:72085548-72085567 MS.gene066426:intron 20.0%
!! TAGAATAATATATGTTCACA+AGG - chr8.1:72085852-72085871 None:intergenic 20.0%
!! TATAAACAACTAACAAGAAA+AGG - chr8.1:72084042-72084061 None:intergenic 20.0%
!! TCACTCAAAAAATAACTAAA+GGG - chr8.1:72084853-72084872 None:intergenic 20.0%
!! TTGTATATGTTAACATATTG+AGG + chr8.1:72085210-72085229 MS.gene066426:intron 20.0%
!!! ATACATATACACTTTTTCTT+TGG + chr8.1:72084656-72084675 MS.gene066426:intron 20.0%
!!! GGATTTGATTTATAAATGAA+TGG + chr8.1:72086392-72086411 MS.gene066426:intron 20.0%
!!! TACATATACACTTTTTCTTT+GGG + chr8.1:72084657-72084676 MS.gene066426:intron 20.0%
!!! TAGTTGTAAGAAATTTTCTA+AGG - chr8.1:72084091-72084110 None:intergenic 20.0%
!!! TCATGTTTTCCTAAAAAAAA+TGG + chr8.1:72085982-72086001 MS.gene066426:intron 20.0%
!!! TTAGTCATATTTTTTATACC+TGG + chr8.1:72087307-72087326 MS.gene066426:intron 20.0%
!!! TTATACACGAATTACAATTT+TGG - chr8.1:72084010-72084029 None:intergenic 20.0%
! AAAACAAGAAGAAAAAGAAG+AGG + chr8.1:72082414-72082433 MS.gene066426:CDS 25.0%
! AACTTACACTATATTCTGTA+TGG - chr8.1:72085781-72085800 None:intergenic 25.0%
! AATAATACAGAAACCAAAGA+CGG - chr8.1:72082548-72082567 None:intergenic 25.0%
! AATAATCAAACCAATTTCCT+TGG - chr8.1:72084237-72084256 None:intergenic 25.0%
! AATACATAAGAATATGTGCT+TGG - chr8.1:72083502-72083521 None:intergenic 25.0%
! ACAAAGACAATATAAGAGAT+AGG - chr8.1:72086908-72086927 None:intergenic 25.0%
! ATCAGTTTAAATCTGCATAA+AGG - chr8.1:72084267-72084286 None:intergenic 25.0%
! CAAAATGCCAAAATGTATAA+TGG - chr8.1:72084562-72084581 None:intergenic 25.0%
! CAAAGACAATATAAGAGATA+GGG - chr8.1:72086907-72086926 None:intergenic 25.0%
! GATATAGATAAAGCTATTCT+GGG - chr8.1:72084205-72084224 None:intergenic 25.0%
! GATGTATCATTATTTGAAAG+TGG - chr8.1:72082747-72082766 None:intergenic 25.0%
! GCATTAAGCAAGAATATTAT+TGG - chr8.1:72083535-72083554 None:intergenic 25.0%
! TACTTCAACTTCTAATAGAA+CGG + chr8.1:72082827-72082846 MS.gene066426:CDS 25.0%
! TATGTTACTGAAAATCTCTT+TGG + chr8.1:72086810-72086829 MS.gene066426:intron 25.0%
! TCAGGAGATTAAAATAGAAT+GGG + chr8.1:72086035-72086054 MS.gene066426:intron 25.0%
! TCTATATCATTAATATGCCA+AGG + chr8.1:72084217-72084236 MS.gene066426:intron 25.0%
! TGATATAGATAAAGCTATTC+TGG - chr8.1:72084206-72084225 None:intergenic 25.0%
! TTAAGATGAATGTGTTTGAT+CGG + chr8.1:72087046-72087065 MS.gene066426:intron 25.0%
! TTATACTGTCACAGAAAATT+AGG - chr8.1:72086767-72086786 None:intergenic 25.0%
! TTCAGGAGATTAAAATAGAA+TGG + chr8.1:72086034-72086053 MS.gene066426:intron 25.0%
! TTTATGCAGATTTAAACTGA+TGG + chr8.1:72084266-72084285 MS.gene066426:intron 25.0%
!! AGAAAAACAGGTTTAATTTC+TGG + chr8.1:72083395-72083414 MS.gene066426:CDS 25.0%
!! ATTTCCTAGATGATTTTTGT+GGG + chr8.1:72085326-72085345 MS.gene066426:intron 25.0%
!! CACTTGAATAAGAATTTTTC+TGG + chr8.1:72083729-72083748 MS.gene066426:intron 25.0%
!! TATGTTTCTGTTCAATCTAT+TGG + chr8.1:72084367-72084386 MS.gene066426:intron 25.0%
!! TGTTAACTGTTTGTTGATTA+TGG + chr8.1:72083703-72083722 MS.gene066426:intron 25.0%
!! TTGTTTTCTAGATGCAATAT+AGG - chr8.1:72085875-72085894 None:intergenic 25.0%
!!! ATTTTTTAGCACTAGATGAT+AGG + chr8.1:72084966-72084985 MS.gene066426:intron 25.0%
!!! TGTTTATAGCTTGTTTATTG+TGG + chr8.1:72084054-72084073 MS.gene066426:intron 25.0%
!!! TTCATATTTTTTTCTCCCAT+TGG - chr8.1:72083123-72083142 None:intergenic 25.0%
AAAATTTACCGAGTGCAAAT+TGG - chr8.1:72086339-72086358 None:intergenic 30.0%
AAACCATTAGAGAGAAAGTT+GGG - chr8.1:72085661-72085680 None:intergenic 30.0%
AACCTGAAGATATTAAGTAG+AGG + chr8.1:72084178-72084197 MS.gene066426:intron 30.0%
AAGACAAAGAAGCTTATCTT+TGG + chr8.1:72087452-72087471 MS.gene066426:CDS 30.0%
AAGATATTCCAAATCATAGC+TGG + chr8.1:72087190-72087209 MS.gene066426:CDS 30.0%
AGGAAAAAAAAGTAGTGTTG+TGG + chr8.1:72086152-72086171 MS.gene066426:intron 30.0%
ATCAAACATTTGGATCCAAT+GGG + chr8.1:72083105-72083124 MS.gene066426:CDS 30.0%
ATTAAAATAGAATGGGGCAA+GGG + chr8.1:72086042-72086061 MS.gene066426:CDS 30.0%
CAAATGATATTCAAGACAGT+AGG + chr8.1:72085722-72085741 MS.gene066426:intron 30.0%
CACATCTGTTACAGAAATAT+TGG + chr8.1:72087340-72087359 MS.gene066426:intron 30.0%
CAGATGTGAATATAAAATCC+AGG - chr8.1:72087328-72087347 None:intergenic 30.0%
CAGGAGATTAAAATAGAATG+GGG + chr8.1:72086036-72086055 MS.gene066426:intron 30.0%
CATTAATATGCCAAGGAAAT+TGG + chr8.1:72084224-72084243 MS.gene066426:intron 30.0%
CTTAAAAAACATGCTTGCTT+CGG - chr8.1:72083596-72083615 None:intergenic 30.0%
GAGTTTACATTCATTACAGA+TGG - chr8.1:72086721-72086740 None:intergenic 30.0%
GGAGACTAAAAACTAACTAA+AGG - chr8.1:72085516-72085535 None:intergenic 30.0%
TATCATGATATATCTGAGGA+TGG + chr8.1:72082708-72082727 MS.gene066426:CDS 30.0%
TATCCTCGATAAACCTAAAA+TGG + chr8.1:72086274-72086293 MS.gene066426:intron 30.0%
TCTAGTAAGTTATTGCTAAG+TGG + chr8.1:72084501-72084520 MS.gene066426:intron 30.0%
TCTGTTCATGAAAGAAAAAC+AGG + chr8.1:72083383-72083402 MS.gene066426:CDS 30.0%
TGACTTTACATATTCCTCTT+TGG - chr8.1:72084747-72084766 None:intergenic 30.0%
TGCTTATCATGATATATCTG+AGG + chr8.1:72082704-72082723 MS.gene066426:CDS 30.0%
TTAGCAATCCCTAAAAACTA+AGG - chr8.1:72083838-72083857 None:intergenic 30.0%
! AAAATGGCAAGTTGAGTTAT+TGG + chr8.1:72085998-72086017 MS.gene066426:intron 30.0%
! AAAGAATTTTGTAGAATGCG+AGG + chr8.1:72085042-72085061 MS.gene066426:intron 30.0%
! ACATATTGAGGTGTTTCTTA+AGG + chr8.1:72085222-72085241 MS.gene066426:intron 30.0%
! AGGGAATCCATTATACATTT+TGG + chr8.1:72084552-72084571 MS.gene066426:intron 30.0%
! ATTTTGTACCTTTTCACTTG+GGG + chr8.1:72084576-72084595 MS.gene066426:intron 30.0%
! CAAATGTTTGATGACTACTA+CGG - chr8.1:72083097-72083116 None:intergenic 30.0%
! CATTTTGTACCTTTTCACTT+GGG + chr8.1:72084575-72084594 MS.gene066426:intron 30.0%
! CTATGATTTGGAATATCTTG+AGG - chr8.1:72087189-72087208 None:intergenic 30.0%
! GAAGTTGAAGTATTCAATTC+AGG - chr8.1:72082819-72082838 None:intergenic 30.0%
! GATTAAAGCTTTAATCTGGA+AGG - chr8.1:72086479-72086498 None:intergenic 30.0%
! GATTTCCTAGATGATTTTTG+TGG + chr8.1:72085325-72085344 MS.gene066426:intron 30.0%
! GATTTCGATCTTGTAGTTTT+TGG - chr8.1:72085081-72085100 None:intergenic 30.0%
! GTTTTCTTCTTCAAGATCTA+CGG - chr8.1:72082501-72082520 None:intergenic 30.0%
! TAAATCAAGCTGAATTTTGC+AGG + chr8.1:72084710-72084729 MS.gene066426:intron 30.0%
! TGTTTTTCTTGTCATCTTCA+GGG - chr8.1:72082400-72082419 None:intergenic 30.0%
! TTGTTGAGGAATACCATTTT+AGG - chr8.1:72086290-72086309 None:intergenic 30.0%
! TTTTCTTCTTCAAGATCTAC+GGG - chr8.1:72082500-72082519 None:intergenic 30.0%
!! AACAGGTTTAATTTCTGGTA+AGG + chr8.1:72083400-72083419 MS.gene066426:CDS 30.0%
!! AGTGGATTAAAGCTTTAATC+TGG - chr8.1:72086483-72086502 None:intergenic 30.0%
!! GAGTTGATGTCATTGAAAAA+AGG + chr8.1:72086866-72086885 MS.gene066426:intron 30.0%
!! TTGTTTTTCTTGTCATCTTC+AGG - chr8.1:72082401-72082420 None:intergenic 30.0%
!!! AAGCAAGCATGTTTTTTAAG+TGG + chr8.1:72083596-72083615 MS.gene066426:intron 30.0%
!!! ATACCATTTTAGGTTTATCG+AGG - chr8.1:72086280-72086299 None:intergenic 30.0%
!!! CTCAACTTGCCATTTTTTTT+AGG - chr8.1:72085994-72086013 None:intergenic 30.0%
!!! GCATGTTTTTTAAGTGGTAA+TGG + chr8.1:72083602-72083621 MS.gene066426:intron 30.0%
!!! TTTTGCATGCTTGTTGTTTT+CGG - chr8.1:72083862-72083881 None:intergenic 30.0%
AAAGATGGTAGTCTCATGTT+AGG - chr8.1:72085628-72085647 None:intergenic 35.0%
AAAGGAACTAGAAGTTGAGA+AGG + chr8.1:72086098-72086117 MS.gene066426:CDS 35.0%
AACTCCTTTGAATTCTTCCT+TGG - chr8.1:72083350-72083369 None:intergenic 35.0%
AGAGATTGACAGAAAAAGGA+AGG + chr8.1:72083433-72083452 MS.gene066426:CDS 35.0%
AGCTAATCTAAATGTTGCTC+CGG - chr8.1:72083916-72083935 None:intergenic 35.0%
AGTAAGTTATTGCTAAGTGG+AGG + chr8.1:72084504-72084523 MS.gene066426:intron 35.0%
AGTGATAAAATGAGGGAATC+TGG + chr8.1:72087153-72087172 MS.gene066426:CDS 35.0%
ATAGACTTGGAAGAAAGCAA+TGG - chr8.1:72086659-72086678 None:intergenic 35.0%
ATCAGGTTCAACAATAGACT+TGG - chr8.1:72086672-72086691 None:intergenic 35.0%
ATCTGATGTTTCTCATCGTT+CGG + chr8.1:72083280-72083299 MS.gene066426:CDS 35.0%
ATGCAGTCAACAAAATACCT+TGG - chr8.1:72084792-72084811 None:intergenic 35.0%
CAAACCATTAGAGAGAAAGT+TGG - chr8.1:72085662-72085681 None:intergenic 35.0%
CAATATAAGAGATAGGGAGA+AGG - chr8.1:72086901-72086920 None:intergenic 35.0%
CATCAAACATTTGGATCCAA+TGG + chr8.1:72083104-72083123 MS.gene066426:CDS 35.0%
CGTAGTAGTCATCAAACATT+TGG + chr8.1:72083095-72083114 MS.gene066426:CDS 35.0%
GAAAACAACAAGCATGCAAA+AGG + chr8.1:72083861-72083880 MS.gene066426:intron 35.0%
GAAAACGATGACAAATTGTC+AGG + chr8.1:72082515-72082534 MS.gene066426:CDS 35.0%
GAGAAGAGATTGACAGAAAA+AGG + chr8.1:72083429-72083448 MS.gene066426:CDS 35.0%
GATTAAAATAGAATGGGGCA+AGG + chr8.1:72086041-72086060 MS.gene066426:CDS 35.0%
GCTGTATATCGTGATAACAA+AGG + chr8.1:72084318-72084337 MS.gene066426:CDS 35.0%
GTAACCCACAAAAATCATCT+AGG - chr8.1:72085333-72085352 None:intergenic 35.0%
GTAAGTTATTGCTAAGTGGA+GGG + chr8.1:72084505-72084524 MS.gene066426:intron 35.0%
GTCCTCTACTTAATATCTTC+AGG - chr8.1:72084183-72084202 None:intergenic 35.0%
TCAATGTCTTCGTCAACTAT+CGG - chr8.1:72082642-72082661 None:intergenic 35.0%
TCAGCTAACATATGTGTACA+TGG - chr8.1:72085811-72085830 None:intergenic 35.0%
TCAGTCTTAAGTCAACAAAG+TGG - chr8.1:72086501-72086520 None:intergenic 35.0%
TCATACTTCAGTTACAGCAT+AGG - chr8.1:72085926-72085945 None:intergenic 35.0%
TCATGATAAACACCAACATC+AGG - chr8.1:72086846-72086865 None:intergenic 35.0%
TCTATTGGATGCCTTTGTAT+AGG + chr8.1:72084382-72084401 MS.gene066426:intron 35.0%
TGCAGTCAACAAAATACCTT+GGG - chr8.1:72084791-72084810 None:intergenic 35.0%
TTCATCAACTTGTCAAGTTC+AGG - chr8.1:72086952-72086971 None:intergenic 35.0%
TTGAAGTAAAGCGTATGAAG+AGG + chr8.1:72082658-72082677 MS.gene066426:CDS 35.0%
TTGGCTATCTTCTTAACTTC+AGG + chr8.1:72086017-72086036 MS.gene066426:intron 35.0%
TTTCTTTCATGAACAGATGC+TGG - chr8.1:72083380-72083399 None:intergenic 35.0%
! AGCTAGGTAGACATGATTTT+TGG + chr8.1:72084629-72084648 MS.gene066426:intron 35.0%
! AGCTGTTTCACATCAATCTT+TGG + chr8.1:72083307-72083326 MS.gene066426:CDS 35.0%
! GCATTTTGTACCTTTTCACT+TGG + chr8.1:72084574-72084593 MS.gene066426:intron 35.0%
! GCTAGGTAGACATGATTTTT+GGG + chr8.1:72084630-72084649 MS.gene066426:intron 35.0%
! GTTACTTCACCCTTTTATCT+GGG + chr8.1:72086600-72086619 MS.gene066426:intron 35.0%
! GTTGAAGTATTCAATTCAGG+TGG - chr8.1:72082816-72082835 None:intergenic 35.0%
! TAGTCTATCACATTTTGCAC+TGG + chr8.1:72086570-72086589 MS.gene066426:intron 35.0%
! TGAGACTACCATCTTTTCTA+AGG + chr8.1:72085632-72085651 MS.gene066426:intron 35.0%
!! AAAGGAAGGATGATTTGTTG+AGG + chr8.1:72083447-72083466 MS.gene066426:CDS 35.0%
!! AAATTTTGACACCTAGGTTC+TGG + chr8.1:72086352-72086371 MS.gene066426:intron 35.0%
!! AATTTTGACACCTAGGTTCT+GGG + chr8.1:72086353-72086372 MS.gene066426:intron 35.0%
!! AGTTTTGTGTCTGTTAGGAT+AGG + chr8.1:72084432-72084451 MS.gene066426:intron 35.0%
!! TAGTTCTGAGGAATATCAAC+CGG + chr8.1:72083894-72083913 MS.gene066426:intron 35.0%
!! TGAACTTGACAAGTTGATGA+AGG + chr8.1:72086951-72086970 MS.gene066426:CDS 35.0%
!! TGTTACTTCACCCTTTTATC+TGG + chr8.1:72086599-72086618 MS.gene066426:intron 35.0%
!!! TTTTTTTCCTTCTGCATACC+TGG - chr8.1:72086142-72086161 None:intergenic 35.0%
AAAACTCAACCACAACCAAC+TGG + chr8.1:72082437-72082456 MS.gene066426:CDS 40.0%
AACAGCAAACAACGCATATC+AGG - chr8.1:72086689-72086708 None:intergenic 40.0%
AACTTTGATCTAGACGACCT+TGG - chr8.1:72083002-72083021 None:intergenic 40.0%
AAGATCTTTCTCCACCTAGA+CGG + chr8.1:72083156-72083175 MS.gene066426:CDS 40.0%
AATCATAGCTGGTTGAAGAG+AGG + chr8.1:72087201-72087220 MS.gene066426:CDS 40.0%
ACCACAAAGTTCAGCAACAA+AGG + chr8.1:72083679-72083698 MS.gene066426:intron 40.0%
ACCTTTACTAGATGTGCCAT+AGG - chr8.1:72086997-72087016 None:intergenic 40.0%
ATTTCGAACCCTCTGTTTAC+GGG - chr8.1:72082775-72082794 None:intergenic 40.0%
CAACTCTTTCCTTGCTTGTA+GGG + chr8.1:72087386-72087405 MS.gene066426:intron 40.0%
CATCCAGATATGAAACACAG+CGG - chr8.1:72084824-72084843 None:intergenic 40.0%
CATTTCGAACCCTCTGTTTA+CGG - chr8.1:72082776-72082795 None:intergenic 40.0%
CCTAACAGACACAAAACTTC+AGG - chr8.1:72084430-72084449 None:intergenic 40.0%
CGCTCAAAGCTAGAATTAGA+GGG + chr8.1:72085100-72085119 MS.gene066426:intron 40.0%
CTCTTCAACCAGCTATGATT+TGG - chr8.1:72087201-72087220 None:intergenic 40.0%
GATATATCTGAGGATGGAAG+TGG + chr8.1:72082714-72082733 MS.gene066426:CDS 40.0%
GCCTTTGTATAGGAACCAAT+GGG + chr8.1:72084392-72084411 MS.gene066426:intron 40.0%
GGAAAACAAAGTCCTGATGT+TGG + chr8.1:72086831-72086850 MS.gene066426:intron 40.0%
GGGGGATAGTGATAAAATGA+GGG + chr8.1:72087146-72087165 MS.gene066426:CDS 40.0%
GTAGACAACCAATTTGCACT+CGG + chr8.1:72086328-72086347 MS.gene066426:intron 40.0%
GTATTCAATTCAGGTGGTTC+TGG - chr8.1:72082810-72082829 None:intergenic 40.0%
GTCAGGTATAATACCGTCTT+TGG + chr8.1:72082532-72082551 MS.gene066426:intron 40.0%
TCAACTCTTTCCTTGCTTGT+AGG + chr8.1:72087385-72087404 MS.gene066426:intron 40.0%
TCCACCAAGGAAGAATTCAA+AGG + chr8.1:72083343-72083362 MS.gene066426:CDS 40.0%
TCCTATGGCACATCTAGTAA+AGG + chr8.1:72086993-72087012 MS.gene066426:CDS 40.0%
TCCTTTGAATTCTTCCTTGG+TGG - chr8.1:72083347-72083366 None:intergenic 40.0%
TCGCTCAAAGCTAGAATTAG+AGG + chr8.1:72085099-72085118 MS.gene066426:intron 40.0%
TCTACAACTAACAAGCCAGT+TGG - chr8.1:72082455-72082474 None:intergenic 40.0%
TGCCTTTGTATAGGAACCAA+TGG + chr8.1:72084391-72084410 MS.gene066426:intron 40.0%
TGGGGGATAGTGATAAAATG+AGG + chr8.1:72087145-72087164 MS.gene066426:CDS 40.0%
TGTCCCAACTTTCTCTCTAA+TGG + chr8.1:72085655-72085674 MS.gene066426:intron 40.0%
TTACTAACATGTTTCCGTCG+AGG - chr8.1:72083047-72083066 None:intergenic 40.0%
TTACTCAAAAGTGGAGGTGA+GGG - chr8.1:72086626-72086645 None:intergenic 40.0%
TTATCACTATCCCCCAAGTT+TGG - chr8.1:72087141-72087160 None:intergenic 40.0%
TTCATGAACAGATGCTGGAA+TGG - chr8.1:72083375-72083394 None:intergenic 40.0%
TTGGGACACCTTAGAAAAGA+TGG - chr8.1:72085643-72085662 None:intergenic 40.0%
TTTACTCAAAAGTGGAGGTG+AGG - chr8.1:72086627-72086646 None:intergenic 40.0%
TTTGTGTCTGTTAGGATAGG+AGG + chr8.1:72084435-72084454 MS.gene066426:intron 40.0%
! AAGGCTTTGGTTGTTGATGT+TGG - chr8.1:72085401-72085420 None:intergenic 40.0%
! ATCAAGCTGAATTTTGCAGG+AGG + chr8.1:72084713-72084732 MS.gene066426:intron 40.0%
! CCATGTGAAGTATCTTGAGA+GGG - chr8.1:72083197-72083216 None:intergenic 40.0%
! GGTATAGACTAGTAGTTCTG+AGG + chr8.1:72083882-72083901 MS.gene066426:intron 40.0%
! TCCATGTGAAGTATCTTGAG+AGG - chr8.1:72083198-72083217 None:intergenic 40.0%
!! ATGACTTCTGAGACTTAGCA+AGG - chr8.1:72083776-72083795 None:intergenic 40.0%
!! CCTGAAGTTTTGTGTCTGTT+AGG + chr8.1:72084427-72084446 MS.gene066426:intron 40.0%
!! CTCGGTAAATTTTGACACCT+AGG + chr8.1:72086346-72086365 MS.gene066426:intron 40.0%
!! GATGGTGTTGATCGTAGTAA+TGG + chr8.1:72087273-72087292 MS.gene066426:CDS 40.0%
!! TGACAAGTTGATGAAGGAGA+GGG + chr8.1:72086957-72086976 MS.gene066426:CDS 40.0%
!! TTGACAAGTTGATGAAGGAG+AGG + chr8.1:72086956-72086975 MS.gene066426:CDS 40.0%
AAGTTTGGAAGAACAGGCTC+TGG - chr8.1:72087126-72087145 None:intergenic 45.0%
AATACACGTTCAGGGAGTGA+GGG + chr8.1:72084528-72084547 MS.gene066426:intron 45.0%
AATTCTTCCTTGGTGGAGAG+AGG - chr8.1:72083340-72083359 None:intergenic 45.0%
ACCACGTGGAGTCAATTACA+TGG + chr8.1:72085426-72085445 MS.gene066426:intron 45.0%
ACTAACAAGCCAGTTGGTTG+TGG - chr8.1:72082449-72082468 None:intergenic 45.0%
AGAGCCTGTTCTTCCAAACT+TGG + chr8.1:72087125-72087144 MS.gene066426:CDS 45.0%
AGATCTTTCTCCACCTAGAC+GGG + chr8.1:72083157-72083176 MS.gene066426:CDS 45.0%
AGCCTGTTCTTCCAAACTTG+GGG + chr8.1:72087127-72087146 MS.gene066426:CDS 45.0%
AGTACAGTATCTCTTCGAGG+AGG + chr8.1:72084604-72084623 MS.gene066426:intron 45.0%
ATCTGAGGATGGAAGTGGTT+GGG + chr8.1:72082719-72082738 MS.gene066426:CDS 45.0%
ATGAAGGAGAGGGTAAGATG+GGG + chr8.1:72086967-72086986 MS.gene066426:CDS 45.0%
CCCTCTCAAGATACTTCACA+TGG + chr8.1:72083194-72083213 MS.gene066426:CDS 45.0%
GAAAGTAGACGATAAGCCCA+AGG + chr8.1:72084772-72084791 MS.gene066426:CDS 45.0%
GAACGTGACTCACAACATTC+TGG + chr8.1:72082906-72082925 MS.gene066426:CDS 45.0%
GAATGTTGTGAGTCACGTTC+AGG - chr8.1:72082906-72082925 None:intergenic 45.0%
GAGCCTGTTCTTCCAAACTT+GGG + chr8.1:72087126-72087145 MS.gene066426:CDS 45.0%
GATGAAGGAGAGGGTAAGAT+GGG + chr8.1:72086966-72086985 MS.gene066426:CDS 45.0%
GCCTTTGTTGCTGAACTTTG+TGG - chr8.1:72083683-72083702 None:intergenic 45.0%
GTACCGCTGTGTTTCATATC+TGG + chr8.1:72084818-72084837 MS.gene066426:intron 45.0%
GTTTAGAAGCTGCTCCAAAC+CGG + chr8.1:72087223-72087242 MS.gene066426:CDS 45.0%
TATCTGAGGATGGAAGTGGT+TGG + chr8.1:72082718-72082737 MS.gene066426:CDS 45.0%
TGATGAAGGAGAGGGTAAGA+TGG + chr8.1:72086965-72086984 MS.gene066426:CDS 45.0%
TGTCATAGCGTTTCAACTGC+CGG - chr8.1:72082875-72082894 None:intergenic 45.0%
TGTCTGTTAGGATAGGAGGA+GGG + chr8.1:72084439-72084458 MS.gene066426:intron 45.0%
TTGTAGACGAAGATCCAACC+TGG + chr8.1:72082468-72082487 MS.gene066426:CDS 45.0%
TTTCGAACCCTCTGTTTACG+GGG - chr8.1:72082774-72082793 None:intergenic 45.0%
! AGAAGGAAAAGCCTTTTGCG+CGG + chr8.1:72086115-72086134 MS.gene066426:CDS 45.0%
! ATGTAATTGACTCCACGTGG+TGG - chr8.1:72085427-72085446 None:intergenic 45.0%
! GAGAGTACAGTATCTCTTCG+AGG + chr8.1:72084601-72084620 MS.gene066426:intron 45.0%
! TCCATGTAATTGACTCCACG+TGG - chr8.1:72085430-72085449 None:intergenic 45.0%
! TGTAATTGACTCCACGTGGT+GGG - chr8.1:72085426-72085445 None:intergenic 45.0%
!! AATTCAGGTGGTTCTGGTGA+AGG - chr8.1:72082804-72082823 None:intergenic 45.0%
!! AGCTCTAGCTCTAGTTGTTG+AGG - chr8.1:72086304-72086323 None:intergenic 45.0%
!! GCCCATTGGTTCCTATACAA+AGG - chr8.1:72084396-72084415 None:intergenic 45.0%
!!! ATTTTAAATTTTTTCAAATA+TGG + chr8.1:72084886-72084905 MS.gene066426:intron 5.0%
AAACCGGTATGGGATAAGGC+CGG + chr8.1:72087239-72087258 MS.gene066426:CDS 50.0%
AAGCTGCTCCAAACCGGTAT+GGG + chr8.1:72087229-72087248 MS.gene066426:CDS 50.0%
ACTCTCTGCCCCAAGTGAAA+AGG - chr8.1:72084587-72084606 None:intergenic 50.0%
AGGAGGACGCATTACCAAAG+AGG + chr8.1:72084730-72084749 MS.gene066426:intron 50.0%
AGGTGAGGGCCCAGATAAAA+GGG - chr8.1:72086612-72086631 None:intergenic 50.0%
AGTGGAGGGAATACACGTTC+AGG + chr8.1:72084519-72084538 MS.gene066426:intron 50.0%
ATCTCCACCCCGTAAACAGA+GGG + chr8.1:72082764-72082783 MS.gene066426:CDS 50.0%
ATTCACACAGCCCAGAACCT+AGG - chr8.1:72086366-72086385 None:intergenic 50.0%
CGTGACTCACAACATTCTGG+CGG + chr8.1:72082909-72082928 MS.gene066426:CDS 50.0%
CTAACATGTTTCCGTCGAGG+AGG - chr8.1:72083044-72083063 None:intergenic 50.0%
CTCCAAACCGGTATGGGATA+AGG + chr8.1:72087235-72087254 MS.gene066426:CDS 50.0%
CTCTGATCTCTGCGTTTACG+AGG - chr8.1:72082957-72082976 None:intergenic 50.0%
CTGGGCTGTGTGAATTGGTT+TGG + chr8.1:72086371-72086390 MS.gene066426:intron 50.0%
CTTCTCGAACCCTACAAGCA+AGG - chr8.1:72087398-72087417 None:intergenic 50.0%
CTTGCTTGTAGGGTTCGAGA+AGG + chr8.1:72087396-72087415 MS.gene066426:intron 50.0%
GAATACACGTTCAGGGAGTG+AGG + chr8.1:72084527-72084546 MS.gene066426:intron 50.0%
GATAGGAGGAGGGGTAAGAA+AGG + chr8.1:72084449-72084468 MS.gene066426:intron 50.0%
GATCTTTCTCCACCTAGACG+GGG + chr8.1:72083158-72083177 MS.gene066426:CDS 50.0%
GCCTGTTCTTCCAAACTTGG+GGG + chr8.1:72087128-72087147 MS.gene066426:CDS 50.0%
GGAAGCTGAGGCTAAGCTAA+AGG + chr8.1:72086080-72086099 MS.gene066426:CDS 50.0%
GGTAAGATGGGGTGATCCTA+TGG + chr8.1:72086978-72086997 MS.gene066426:CDS 50.0%
GTCTGTTAGGATAGGAGGAG+GGG + chr8.1:72084440-72084459 MS.gene066426:intron 50.0%
GTGATATGTCACCTCCTCGA+CGG + chr8.1:72083030-72083049 MS.gene066426:CDS 50.0%
GTGGAGGGAATACACGTTCA+GGG + chr8.1:72084520-72084539 MS.gene066426:intron 50.0%
GTGTCTGTTAGGATAGGAGG+AGG + chr8.1:72084438-72084457 MS.gene066426:intron 50.0%
TCCCCCAAGTTTGGAAGAAC+AGG - chr8.1:72087132-72087151 None:intergenic 50.0%
TCGATCTTGCCACACTATGC+TGG - chr8.1:72083256-72083275 None:intergenic 50.0%
TGATCTCTGCGTTTACGAGG+AGG - chr8.1:72082954-72082973 None:intergenic 50.0%
TGTGAGTCACGTTCAGGTGA+TGG - chr8.1:72082900-72082919 None:intergenic 50.0%
! GTTTGATGACTACTACGGCG+AGG - chr8.1:72083092-72083111 None:intergenic 50.0%
! TCTCTTCGAGGAGGTTAGCT+AGG + chr8.1:72084613-72084632 MS.gene066426:intron 50.0%
!! AGGTTCTGGGCTGTGTGAAT+TGG + chr8.1:72086366-72086385 MS.gene066426:intron 50.0%
!! ATAGGAACCAATGGGCTGAG+AGG + chr8.1:72084400-72084419 MS.gene066426:intron 50.0%
AACCGGTATGGGATAAGGCC+GGG + chr8.1:72087240-72087259 MS.gene066426:CDS 55.0%
AAGATCTACGGGCTTCTGCC+AGG - chr8.1:72082489-72082508 None:intergenic 55.0%
ACAGTGACCTCTCTCCACCA+AGG + chr8.1:72083330-72083349 MS.gene066426:CDS 55.0%
ACGTTCAGGGAGTGAGGGAA+GGG + chr8.1:72084533-72084552 MS.gene066426:intron 55.0%
CAAGGGCCTTGCTCAAAAGC+GGG + chr8.1:72086059-72086078 MS.gene066426:CDS 55.0%
CAGCTGTAGCTCGTGAACCA+AGG + chr8.1:72082982-72083001 MS.gene066426:CDS 55.0%
CATCTCCACCCCGTAAACAG+AGG + chr8.1:72082763-72082782 MS.gene066426:CDS 55.0%
CGGCGAGGAGACGAAATATC+TGG - chr8.1:72083077-72083096 None:intergenic 55.0%
CTGATTTATCCCCTTCGCGC+CGG + chr8.1:72082853-72082872 MS.gene066426:CDS 55.0%
GAAGAGGCTTGAGCAGCTGA+AGG + chr8.1:72082674-72082693 MS.gene066426:CDS 55.0%
GAAGCTGCTCCAAACCGGTA+TGG + chr8.1:72087228-72087247 MS.gene066426:CDS 55.0%
GAATCATGACGACCCCGTCT+AGG - chr8.1:72083173-72083192 None:intergenic 55.0%
GAGGTGAGGGCCCAGATAAA+AGG - chr8.1:72086613-72086632 None:intergenic 55.0%
GATATACAGCTTCAGCGCCG+CGG - chr8.1:72084308-72084327 None:intergenic 55.0%
GCAAGGGCCTTGCTCAAAAG+CGG + chr8.1:72086058-72086077 MS.gene066426:CDS 55.0%
TGCTCAAAAGCGGGAAGCTG+AGG + chr8.1:72086068-72086087 MS.gene066426:CDS 55.0%
! AAAAGCCTTTTGCGCGGACC+AGG + chr8.1:72086121-72086140 MS.gene066426:CDS 55.0%
! CAAAGCCTTTTCCCACCACG+TGG + chr8.1:72085412-72085431 MS.gene066426:intron 55.0%
! CACGTGGTGGGAAAAGGCTT+TGG - chr8.1:72085414-72085433 None:intergenic 55.0%
! CTGATGGACCCTGTCATCAG+TGG + chr8.1:72084282-72084301 MS.gene066426:CDS 55.0%
! GGCCTTATCCCATACCGGTT+TGG - chr8.1:72087240-72087259 None:intergenic 55.0%
! TGACTCCACGTGGTGGGAAA+AGG - chr8.1:72085420-72085439 None:intergenic 55.0%
!! CAGCTTCCCGCTTTTGAGCA+AGG - chr8.1:72086068-72086087 None:intergenic 55.0%
!! GAACCAATGGGCTGAGAGGA+AGG + chr8.1:72084404-72084423 MS.gene066426:intron 55.0%
ACACCATCCCAGTGTCGTCC+CGG - chr8.1:72087261-72087280 None:intergenic 60.0%
ACACTATGCTGGCGTCTCCG+TGG - chr8.1:72083245-72083264 None:intergenic 60.0%
ACGGAGACGCCAGCATAGTG+TGG + chr8.1:72083244-72083263 MS.gene066426:CDS 60.0%
ACTATGCTGGCGTCTCCGTG+GGG - chr8.1:72083243-72083262 None:intergenic 60.0%
AGGCCTTCCTCTCAGCCCAT+TGG - chr8.1:72084410-72084429 None:intergenic 60.0%
CACGTTCAGGGAGTGAGGGA+AGG + chr8.1:72084532-72084551 MS.gene066426:intron 60.0%
CACTATGCTGGCGTCTCCGT+GGG - chr8.1:72083244-72083263 None:intergenic 60.0%
CGAACCCTCTGTTTACGGGG+TGG - chr8.1:72082771-72082790 None:intergenic 60.0%
CGTCTGACCTTTCACCCCCA+CGG + chr8.1:72083225-72083244 MS.gene066426:CDS 60.0%
GATAAGGCCGGGACGACACT+GGG + chr8.1:72087251-72087270 MS.gene066426:CDS 60.0%
GCATACCTGGTCCGCGCAAA+AGG - chr8.1:72086129-72086148 None:intergenic 60.0%
GTTTCAACTGCCGGCGCGAA+GGG - chr8.1:72082866-72082885 None:intergenic 60.0%
TCATGACGACCCCGTCTAGG+TGG - chr8.1:72083170-72083189 None:intergenic 60.0%
TCTACGGGCTTCTGCCAGGT+TGG - chr8.1:72082485-72082504 None:intergenic 60.0%
TTTCAACTGCCGGCGCGAAG+GGG - chr8.1:72082865-72082884 None:intergenic 60.0%
! GTCCCGGCCTTATCCCATAC+CGG - chr8.1:72087245-72087264 None:intergenic 60.0%
CGTTTCAACTGCCGGCGCGA+AGG - chr8.1:72082867-72082886 None:intergenic 65.0%
CTATGCTGGCGTCTCCGTGG+GGG - chr8.1:72083242-72083261 None:intergenic 65.0%
GACCCTGTCATCAGTGGCCG+CGG + chr8.1:72084288-72084307 MS.gene066426:CDS 65.0%
GCGCGGACCAGGTATGCAGA+AGG + chr8.1:72086132-72086151 MS.gene066426:intron 65.0%
GGATAAGGCCGGGACGACAC+TGG + chr8.1:72087250-72087269 MS.gene066426:CDS 65.0%
AGGCCGGGACGACACTGGGA+TGG + chr8.1:72087255-72087274 MS.gene066426:CDS 70.0%
CGCCGCGGCCACTGATGACA+GGG - chr8.1:72084293-72084312 None:intergenic 70.0%
GGCGTCTCCGTGGGGGTGAA+AGG - chr8.1:72083235-72083254 None:intergenic 70.0%
GCGCCGCGGCCACTGATGAC+AGG - chr8.1:72084294-72084313 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 72082350 72087492 72082350 ID=MS.gene066426
chr8.1 mRNA 72082350 72087492 72082350 ID=MS.gene066426.t1;Parent=MS.gene066426
chr8.1 exon 72082350 72082536 72082350 ID=MS.gene066426.t1.exon1;Parent=MS.gene066426.t1
chr8.1 CDS 72082350 72082536 72082350 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72082628 72083468 72082628 ID=MS.gene066426.t1.exon2;Parent=MS.gene066426.t1
chr8.1 CDS 72082628 72083468 72082628 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72084275 72084339 72084275 ID=MS.gene066426.t1.exon3;Parent=MS.gene066426.t1
chr8.1 CDS 72084275 72084339 72084275 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72084732 72084793 72084732 ID=MS.gene066426.t1.exon4;Parent=MS.gene066426.t1
chr8.1 CDS 72084732 72084793 72084732 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72086039 72086142 72086039 ID=MS.gene066426.t1.exon5;Parent=MS.gene066426.t1
chr8.1 CDS 72086039 72086142 72086039 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72086942 72087014 72086942 ID=MS.gene066426.t1.exon6;Parent=MS.gene066426.t1
chr8.1 CDS 72086942 72087014 72086942 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72087114 72087294 72087114 ID=MS.gene066426.t1.exon7;Parent=MS.gene066426.t1
chr8.1 CDS 72087114 72087294 72087114 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
chr8.1 exon 72087407 72087492 72087407 ID=MS.gene066426.t1.exon8;Parent=MS.gene066426.t1
chr8.1 CDS 72087407 72087492 72087407 ID=cds.MS.gene066426.t1;Parent=MS.gene066426.t1
Gene Sequence

>MS.gene066426

ATGGGATCTAACTCATTAAAGGATTATCTAAAAAAATATGTGAGTAACCCTGAAGATGACAAGAAAAACAAGAAGAAAAAGAAGAGGAAAACTCAACCACAACCAACTGGCTTGTTAGTTGTAGACGAAGATCCAACCTGGCAGAAGCCCGTAGATCTTGAAGAAGAAAACGATGACAAATTGTCAGGTATAATACCGTCTTTGGTTTCTGTATTATTCAATTAACTATAAATGATACTGTAGTATGATATTAATTCACAATAACATTATTTTATTAGATGAGGAGAAGCCGATAGTTGACGAAGACATTGAAGTAAAGCGTATGAAGAGGCTTGAGCAGCTGAAGGCTAGACGTGCTTATCATGATATATCTGAGGATGGAAGTGGTTGGGTTCCACTTTCAAATAATGATACATCTCCACCCCGTAAACAGAGGGTTCGAAATGACACTCCTTCACCAGAACCACCTGAATTGAATACTTCAACTTCTAATAGAACGGATGCTGATTTATCCCCTTCGCGCCGGCAGTTGAAACGCTATGACACTCCATCACCTGAACGTGACTCACAACATTCTGGCGGAGTGAATTCTGATTTATCTCCTCCTCGTAAACGCAGAGATCAGAGTGTTACAGCTGTAGCTCGTGAACCAAGGTCGTCTAGATCAAAGTTTGAAGATAGTGATATGTCACCTCCTCGACGGAAACATGTTAGTAATTCGAGTCCAGATATTTCGTCTCCTCGCCGTAGTAGTCATCAAACATTTGGATCCAATGGGAGAAAAAAATATGAAACTTCTGATTTGGAAGATCTTTCTCCACCTAGACGGGGTCGTCATGATTCTCCCTCTCAAGATACTTCACATGGACAAGTGTCGTCTGACCTTTCACCCCCACGGAGACGCCAGCATAGTGTGGCAAGATCGAGTTTATCTGATGTTTCTCATCGTTCGGTGAAAGCTGTTTCACATCAATCTTTGGACAGTGACCTCTCTCCACCAAGGAAGAATTCAAAGGAGTTATCCATTCCAGCATCTGTTCATGAAAGAAAAACAGGTTTAATTTCTGGTAAGGATATCAGAGAAGAGATTGACAGAAAAAGGAAGGATGATTTGTTGAGGTAATTGTTCAATTATTTTATGATTTTTTTCCAAGCACATATTCTTATGTATTAGATGAATTCCCAATAATATTCTTGCTTAATGCCATAACGTTGTAATTCTATTTTGTTTGCTTGTTTAGTTCCGAAGCAAGCATGTTTTTTAAGTGGTAATGGTAGTATGCAATATTCAGTTAGTTCTATCTGCTGTAGACAATTAAAAAAAGTCACACCACAAAGTTCAGCAACAAAGGCTGTTAACTGTTTGTTGATTATGGTTACACTTGAATAAGAATTTTTCTGGTGTGAATGACTTGAGAGTAATCCTTGCTAAGTCTCAGAAGTCATCAATTTATAATTACAATTTGAAGCATAAACAATTTAATTCCTTAGTTTTTAGGGATTGCTAAACCGAAAACAACAAGCATGCAAAAGGTATAGACTAGTAGTTCTGAGGAATATCAACCGGAGCAACATTTAGATTAGCTTGTTTAATTTTTGAAAGAGTTATTAATTATTGTTAGCAACGAAAAGAGACACAACTAAGACAATCACATCTCCAAAATTGTAATTCGTGTATAATGCTTGATTCCTTTTCTTGTTAGTTGTTTATAGCTTGTTTATTGTGGTATGTATTAATCCTTAGAAAATTTCTTACAACTATCTATTAAATTCAATGACAGAGATAAAACGCCAATAAAAATATATATGTCTAGAACTAATTCTTCTAAACCTGAAGATATTAAGTAGAGGACCCAGAATAGCTTTATCTATATCATTAATATGCCAAGGAAATTGGTTTGATTATTATCTATTCCTTTATGCAGATTTAAACTGATGGACCCTGTCATCAGTGGCCGCGGCGCTGAAGCTGTATATCGTGATAACAAAGGTAAAGAGTTGATGTCAATTTTTAGTTTATGTTTCTGTTCAATCTATTGGATGCCTTTGTATAGGAACCAATGGGCTGAGAGGAAGGCCTGAAGTTTTGTGTCTGTTAGGATAGGAGGAGGGGTAAGAAAGGAAAATAAAAAAAAAGAAATGGCATTGTTGTCTAGTAAGTTATTGCTAAGTGGAGGGAATACACGTTCAGGGAGTGAGGGAAGGGAATCCATTATACATTTTGGCATTTTGTACCTTTTCACTTGGGGCAGAGAGTACAGTATCTCTTCGAGGAGGTTAGCTAGGTAGACATGATTTTTGGGTCAATACATATACACTTTTTCTTTGGGTCAATATCATTATGTGATAACATGAATTATTAAATCAAGCTGAATTTTGCAGGAGGACGCATTACCAAAGAGGAATATGTAAAGTCAAAACAGAAAGTAGACGATAAGCCCAAGGTATTTTGTTGACTGCATATTTATGTACCGCTGTGTTTCATATCTGGATGTAGCTTCCCTTTAGTTATTTTTTGAGTGATTATTGTCCCTCTATTTTAAATTTTTTCAAATATGGTCACTTCATCCATATTTTGTTCACTTAAATATCTTAAAGTCTCATTTTTTTAATTAAATTTTTTAGCACTAGATGATAGGTTTGAGATATAAAATAATATCAAAAGTTTAAATGTAAAAAATTGCTAAAATTGAAAGAATTTTGTAGAATGCGAGGAACTAAAATTGCTCCAAAAACTACAAGATCGAAATCGCTCAAAGCTAGAATTAGAGGGACCAAAATTGTATTTAAGTCTATATTATTTTTTAGGATCCAATTTGTGTTTATGTTATATGGGTGATTAAAAATATTCTTTCTTGATTTGTATATGTTAACATATTGAGGTGTTTCTTAAGGACTATCTGCAAATTAAAGTATGATGTTAAGATTGAATTAGTCACATACACTGTTCTGCATATGTTATCTCTATCAAGAGTGATTTCCTAGATGATTTTTGTGGGTTACTTTGAATGTTAATGAAGTACATATTAGGATGTTTATTTTCTTGCTCCAACATCAACAACCAAAGCCTTTTCCCACCACGTGGAGTCAATTACATGGATCAAATAAATATCTTGTGAATCAAATTTGATGAAAGACTACTAAATCTCATTTAATGTTTTGTCCTTTAGTTAGTTTTTAGTCTCCCTCTATTTTTATCTATTAGATTATCTTTCATTTGGTCTATCGCTTCATACAAGTTCTTCTACGTGTCTTCTGCACGCATCTACAAATCACCTAACATGAGACTACCATCTTTTCTAAGGTGTCCCAACTTTCTCTCTAATGGTTTGATTCTTAATTCTTTCTTATCATGCGTAGTTGTTCATCAATCAAATGATATTCAAGACAGTAGGTATCGTCGTAGATTGAAAATTATATAATTATTTCCATACAGAATATAGTGTAAGTTATGTGTTCCATGTACACATATGTTAGCTGAAAGATAATTTTATTAATGCCTTGTGAACATATATTATTCTACCTATATTGCATCTAGAAAACAAAAAAACATCTATATTTAGTCATTTTGTTCCTATGCTGTAACTGAAGTATGAAAGTTTTTTGTATCGATGTTTAAAAGTTGATGTTATTCATGTTTTCCTAAAAAAAATGGCAAGTTGAGTTATTGGCTATCTTCTTAACTTCAGGAGATTAAAATAGAATGGGGCAAGGGCCTTGCTCAAAAGCGGGAAGCTGAGGCTAAGCTAAAGGAACTAGAAGTTGAGAAGGAAAAGCCTTTTGCGCGGACCAGGTATGCAGAAGGAAAAAAAAGTAGTGTTGTGGACTGTCTTAAATTTGCTATCTTATTACTGCAGTAACCTTTTACTTTCTTATTAAGTGTTGTTTAAACATACTACTGACTTTTAGTCATCTGCTTTATCATATCCTCGATAAACCTAAAATGGTATTCCTCAACAACTAGAGCTAGAGCTTGACGTAGACAACCAATTTGCACTCGGTAAATTTTGACACCTAGGTTCTGGGCTGTGTGAATTGGTTTGGATTTGATTTATAAATGAATGGCAGTCTTTACTTGCTATAAGAAAGTAATCAATCAATTTTCTTATAATTTCTCTATTAGCAGCCTTCCAGATTAAAGCTTTAATCCACTTTGTTGACTTAAGACTGATGATTGATTTGTAATAGTCTTAATAGCTGTTATATTTGTTCAGATGCATTAGTCTATCACATTTTGCACTGGTACTAATGTTACTTCACCCTTTTATCTGGGCCCTCACCTCCACTTTTGAGTAAAACGTTCTTACCATTGCTTTCTTCCAAGTCTATTGTTGAACCTGATATGCGTTGTTTGCTGTTGTAGTCACTCCATCTGTAATGAATGTAAACTCTTTTTGTAAATATTTTATAGTTACCTAATTTTCTGTGACAGTATAAAAGTTTATTTATAAAATGATTAGTATGTTACTGAAAATCTCTTTGGAAAACAAAGTCCTGATGTTGGTGTTTATCATGAGAGTTGATGTCATTGAAAAAAGGTTTATTTTTCCTTCTCCCTATCTCTTATATTGTCTTTGTTGTCTTCTTTTTAGAGACGATCCTGAACTTGACAAGTTGATGAAGGAGAGGGTAAGATGGGGTGATCCTATGGCACATCTAGTAAAGGTAATGCAACACAACTCTTATCGCTCAACACTTAAGATGAATGTGTTTGATCGGTTCTGATGACTGATATGTTTTTCGTGTCAATTATCATTCGTGCAGAAAAAATATCCAGAGCCTGTTCTTCCAAACTTGGGGGATAGTGATAAAATGAGGGAATCTGGTTTTGTTGTTCCTCAAGATATTCCAAATCATAGCTGGTTGAAGAGAGGTTTAGAAGCTGCTCCAAACCGGTATGGGATAAGGCCGGGACGACACTGGGATGGTGTTGATCGTAGTAATGGTTAGTTTCATATTAGTCATATTTTTTATACCTGGATTTTATATTCACATCTGTTACAGAAATATTGGAAACTGTTCTAAATTATTGACTTCAACTCTTTCCTTGCTTGTAGGGTTCGAGAAGGCATTGTTCAAGAGAACAAATGAGAGACAAGCTAAAGACAAAGAAGCTTATCTTTGGTCTGTGTCTGATATGTGA

Protein sequence

>MS.gene066426.t1

MGSNSLKDYLKKYVSNPEDDKKNKKKKKRKTQPQPTGLLVVDEDPTWQKPVDLEEENDDKLSDEEKPIVDEDIEVKRMKRLEQLKARRAYHDISEDGSGWVPLSNNDTSPPRKQRVRNDTPSPEPPELNTSTSNRTDADLSPSRRQLKRYDTPSPERDSQHSGGVNSDLSPPRKRRDQSVTAVAREPRSSRSKFEDSDMSPPRRKHVSNSSPDISSPRRSSHQTFGSNGRKKYETSDLEDLSPPRRGRHDSPSQDTSHGQVSSDLSPPRRRQHSVARSSLSDVSHRSVKAVSHQSLDSDLSPPRKNSKELSIPASVHERKTGLISGKDIREEIDRKRKDDLLRFKLMDPVISGRGAEAVYRDNKGGRITKEEYVKSKQKVDDKPKEIKIEWGKGLAQKREAEAKLKELEVEKEKPFARTRDDPELDKLMKERVRWGDPMAHLVKKKYPEPVLPNLGDSDKMRESGFVVPQDIPNHSWLKRGLEAAPNRYGIRPGRHWDGVDRSNGFEKALFKRTNERQAKDKEAYLWSVSDM