AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067802


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067802.t1 MTR_7g085560 98.406 502 8 0 1 502 1 502 0.0 1007
MS.gene067802.t1 MTR_7g085560 98.406 502 8 0 1 502 1 502 0.0 1007
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067802.t1 AT1G16350 72.200 500 133 3 8 502 4 502 0.0 718
MS.gene067802.t1 AT1G79470 69.522 502 144 5 8 502 4 503 0.0 699

Find 169 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTGAGTTGGATGTTAT+TGG 0.267664 7.1:-19506793 MS.gene067802:CDS
CTTACTGCTTGCATGGTATA+TGG 0.277853 7.1:+19505266 None:intergenic
GATTCTGTTACTAAAATAAA+AGG 0.296483 7.1:+19507252 None:intergenic
CGTGAGAGTTTCCGATTATA+TGG 0.304251 7.1:-19507160 MS.gene067802:CDS
TAAGGAGAGGTTAGAGCATT+TGG 0.304384 7.1:-19506905 MS.gene067802:CDS
CACAGAACCCTTGTCTTTAA+CGG 0.321519 7.1:+19505301 None:intergenic
AGGGAATTCTATTTATCAAT+TGG 0.349090 7.1:-19506842 MS.gene067802:CDS
GGATGAAGAGGTGGTGGATT+TGG 0.350172 7.1:-19507043 MS.gene067802:CDS
GGCGGATGGAGAGTGGATGG+TGG 0.364010 7.1:-19506956 MS.gene067802:CDS
CTCAGGAAGTTTGCGCGGTT+GGG 0.364915 7.1:-19506675 MS.gene067802:CDS
GAGGAAATGAAGAAGAGAAA+TGG 0.373725 7.1:-19507087 MS.gene067802:CDS
AATTCTACTGGAAAATTTCT+CGG 0.374014 7.1:-19507225 MS.gene067802:CDS
CACGCCCTTGTCATTTCGAT+TGG 0.374644 7.1:+19507179 None:intergenic
TTGAGAGTTGGTATGGGATC+TGG 0.375174 7.1:-19506712 MS.gene067802:CDS
CCCATGACCTTCTTAGATCC+AGG 0.375991 7.1:-19505202 MS.gene067802:CDS
TGGTGACCGGAGGATCGGTT+GGG 0.377809 7.1:-19506978 MS.gene067802:CDS
TCCTGGAGCTTATGTATATC+AGG 0.378291 7.1:-19505762 MS.gene067802:intron
CACTGTCTCCGAATCCTCTA+TGG 0.382113 7.1:-19507448 MS.gene067802:CDS
TGGTGTGAATGCTGTGGTTT+TGG 0.382670 7.1:-19506875 MS.gene067802:CDS
TTCTTAGATCCAGGGTGTTA+AGG 0.386012 7.1:-19505193 MS.gene067802:CDS
GTCATTTCGATTGGACCAAT+TGG 0.388934 7.1:+19507188 None:intergenic
TTGATTCAAGCTGGTGTTGA+TGG 0.407424 7.1:-19506736 MS.gene067802:CDS
CGATTATATGGAGGCTCCAC+CGG 0.408688 7.1:-19507148 MS.gene067802:CDS
GATCCTCCGGTCACCAACTT+TGG 0.414172 7.1:+19506985 None:intergenic
TGATGGGTTGAGAGTTGGTA+TGG 0.414297 7.1:-19506719 MS.gene067802:CDS
GGAGGATCGGTTGGGGCGGA+TGG 0.417599 7.1:-19506970 MS.gene067802:CDS
CGGTGGAGCCTCCATATAAT+CGG 0.423861 7.1:+19507149 None:intergenic
ACTCAGGAAGTTTGCGCGGT+TGG 0.425370 7.1:-19506676 MS.gene067802:CDS
GATGGTGGCATCTCAAACTC+TGG 0.425465 7.1:-19505860 MS.gene067802:CDS
AAAATTGCCCAAGGGGTTGT+TGG 0.425681 7.1:-19505326 MS.gene067802:CDS
AAATGGAAATGTTGTTGCTT+TGG 0.427126 7.1:-19507070 MS.gene067802:CDS
GCTGGTAGTCTTGAGGCTCC+TGG 0.429575 7.1:-19505779 MS.gene067802:CDS
CAGGTTGAAGGAGGAATTCA+TGG 0.430215 7.1:-19504143 MS.gene067802:CDS
GGCAGAAGCCATAGAGGATT+CGG 0.431522 7.1:+19507440 None:intergenic
TTGCGCGGTTGGGCGTGGTC+AGG 0.443123 7.1:-19506665 MS.gene067802:intron
GAAGTTTGCGCGGTTGGGCG+TGG 0.443788 7.1:-19506670 MS.gene067802:CDS
TCCCTTCGTCGCTTCTCCTA+TGG 0.443897 7.1:-19507472 MS.gene067802:CDS
TGCCTTGAGTCATAGCTTCA+AGG 0.443952 7.1:+19505384 None:intergenic
GCGGATGGAGAGTGGATGGT+GGG 0.445959 7.1:-19506955 MS.gene067802:CDS
GCTTCTGCCATGGCCGCACT+TGG 0.446246 7.1:-19507426 MS.gene067802:CDS
ATTGTAAAGGCTTTATCGTT+GGG 0.447314 7.1:-19505833 MS.gene067802:CDS
TTGGTGACCGGAGGATCGGT+TGG 0.451158 7.1:-19506979 MS.gene067802:CDS
ACAGAATCCGGTAATTCTAC+TGG 0.453236 7.1:-19507237 MS.gene067802:CDS
AACGGCTCCAACAACCCCTT+GGG 0.454984 7.1:+19505319 None:intergenic
ACAGGGAACTGCTGTTTACA+AGG 0.456183 7.1:-19505924 MS.gene067802:intron
TGTGCCTATCCTCTCTGAAC+CGG 0.459765 7.1:-19507328 MS.gene067802:CDS
GATGATTAAGTATGTGAAGA+AGG 0.460326 7.1:-19506818 MS.gene067802:CDS
GGATGGAGAGTGGATGGTGG+GGG 0.460745 7.1:-19506953 MS.gene067802:CDS
CGGATGGAGAGTGGATGGTG+GGG 0.464751 7.1:-19506954 MS.gene067802:CDS
TCTGCCATGGCCGCACTTGG+TGG 0.465824 7.1:-19507423 MS.gene067802:CDS
ATCGTAGGTGTAAGAGAAAC+CGG 0.465899 7.1:+19507584 None:intergenic
GGGAGCATCGACTGTTATGA+TGG 0.465926 7.1:-19505813 MS.gene067802:CDS
GATAGGCACACGGCGGGACT+TGG 0.467362 7.1:+19507341 None:intergenic
ATCCGCCCCAACCGATCCTC+CGG 0.469251 7.1:+19506972 None:intergenic
AGCGACGAAGGGAGTTGAAA+GGG 0.472950 7.1:+19507482 None:intergenic
TTTGTCCACCAGGTTCGTAC+TGG 0.477076 7.1:-19504173 MS.gene067802:intron
TAACGGCTCCAACAACCCCT+TGG 0.477673 7.1:+19505318 None:intergenic
GCCGCGTAACCGTCTTCGAT+TGG 0.478813 7.1:+19507624 None:intergenic
CACGTCAGGCTGCTATTGTC+CGG 0.478909 7.1:-19507368 MS.gene067802:CDS
GAGGAGGTTGAGAGGGTGAG+AGG 0.484489 7.1:-19507012 MS.gene067802:CDS
TATTGTAAAGGCTTTATCGT+TGG 0.489367 7.1:-19505834 MS.gene067802:CDS
TGACGTGAAGGAGTGTTGTT+AGG 0.495408 7.1:+19507384 None:intergenic
GGGGATGTTACGACTGAGAC+GGG 0.496253 7.1:+19507503 None:intergenic
GATTATATGGAGGCTCCACC+GGG 0.497696 7.1:-19507147 MS.gene067802:CDS
TCATCCATTGCTTATAAAAG+TGG 0.502800 7.1:-19505899 MS.gene067802:CDS
CACGGCGGGACTTGGCAGTC+CGG 0.503608 7.1:+19507349 None:intergenic
GGTGTTGATGGGTTGAGAGT+TGG 0.507985 7.1:-19506724 MS.gene067802:CDS
ATCCTCTATGGCTTCTGCCA+TGG 0.508811 7.1:-19507436 MS.gene067802:CDS
GACAAAAGAGGAGGTTGAGA+GGG 0.509210 7.1:-19507019 MS.gene067802:CDS
TGAAGGAGGAATTCATGGAC+TGG 0.511160 7.1:-19504138 MS.gene067802:CDS
CGGTTGGGGCGGATGGAGAG+TGG 0.513980 7.1:-19506963 MS.gene067802:CDS
AAACTCTGGTCATATTGTAA+AGG 0.515767 7.1:-19505846 MS.gene067802:CDS
TTAGAGCATTTGGTGAAAGC+TGG 0.518134 7.1:-19506895 MS.gene067802:CDS
CATATACCATGCAAGCAGTA+AGG 0.518987 7.1:-19505265 MS.gene067802:CDS
TGGGGCGGATGGAGAGTGGA+TGG 0.519730 7.1:-19506959 MS.gene067802:CDS
GGCTATCCAAAGTTGGTGAC+CGG 0.520319 7.1:-19506991 MS.gene067802:CDS
TAACAACACTCCTTCACGTC+AGG 0.521517 7.1:-19507382 MS.gene067802:CDS
GCCGAAGGAGAGACGAAAAC+CGG 0.522856 7.1:+19507309 None:intergenic
GATACCACCAAGTGCGGCCA+TGG 0.523103 7.1:+19507419 None:intergenic
TGGGACGAGGGAACAAGATA+AGG 0.524651 7.1:-19506923 MS.gene067802:CDS
ACTGGAGCAGCACAGGTTGA+AGG 0.526386 7.1:-19504155 MS.gene067802:CDS
TGGTTCTATTTGTACTACTC+AGG 0.528310 7.1:-19506692 MS.gene067802:CDS
ATGATGGGAAGCTTCTTAGC+TGG 0.528805 7.1:-19505797 MS.gene067802:CDS
GGTGACCGGAGGATCGGTTG+GGG 0.529662 7.1:-19506977 MS.gene067802:CDS
ACCTTGCCTTACTGCTTGCA+TGG 0.532254 7.1:+19505259 None:intergenic
ACCTGATATACATAAGCTCC+AGG 0.537758 7.1:+19505761 None:intergenic
AAGCGACGAAGGGAGTTGAA+AGG 0.540703 7.1:+19507481 None:intergenic
GTCCATAGGAGAAGCGACGA+AGG 0.542663 7.1:+19507470 None:intergenic
CCTGAGTTGGATGTTATTGG+TGG 0.543528 7.1:-19506790 MS.gene067802:CDS
CCATGACCTTCTTAGATCCA+GGG 0.546981 7.1:-19505201 MS.gene067802:CDS
TGACAAAAGAGGAGGTTGAG+AGG 0.547501 7.1:-19507020 MS.gene067802:CDS
GCTGAGAATTTGATTCAAGC+TGG 0.548614 7.1:-19506745 MS.gene067802:CDS
CTTCTTAGCTGGTAGTCTTG+AGG 0.548615 7.1:-19505786 MS.gene067802:CDS
GGTGAAGGATGAAGAGGTGG+TGG 0.551586 7.1:-19507049 MS.gene067802:CDS
GGTTCGTACTGGAGCAGCAC+AGG 0.558244 7.1:-19504162 MS.gene067802:CDS
TTAACACCCTGGATCTAAGA+AGG 0.559140 7.1:+19505195 None:intergenic
GGTGGATTTGGTGACAAAAG+AGG 0.559564 7.1:-19507031 MS.gene067802:CDS
GATTCGGAGACAGTGTCCAT+AGG 0.561445 7.1:+19507456 None:intergenic
CCCTGGATCTAAGAAGGTCA+TGG 0.562255 7.1:+19505201 None:intergenic
TAACCGTCTTCGATTGGCGG+AGG 0.564397 7.1:+19507630 None:intergenic
ACTCCTCCGCCAATCGAAGA+CGG 0.564726 7.1:-19507633 MS.gene067802:CDS
TGCTTTGGTGAAGGATGAAG+AGG 0.564999 7.1:-19507055 MS.gene067802:CDS
TGATTCAAGCTGGTGTTGAT+GGG 0.565423 7.1:-19506735 MS.gene067802:CDS
GAAGAAGGTTTATCCTGAGT+TGG 0.566603 7.1:-19506803 MS.gene067802:CDS
ATGGGCAGACTGCAGAGAGT+TGG 0.568777 7.1:+19505220 None:intergenic
GACCGGAGGATCGGTTGGGG+CGG 0.573840 7.1:-19506974 MS.gene067802:CDS
GATGGGTTGAGAGTTGGTAT+GGG 0.574553 7.1:-19506718 MS.gene067802:CDS
GGAGTTCCTGTCATTGCTGA+TGG 0.577457 7.1:-19505878 MS.gene067802:CDS
GAGTTCCACGGTAGAGAACC+CGG 0.577584 7.1:+19507129 None:intergenic
TGACTCAAGGCAGTGATCAA+AGG 0.583071 7.1:-19505373 MS.gene067802:CDS
GGTGAGAGGCTATCCAAAGT+TGG 0.583805 7.1:-19506998 MS.gene067802:CDS
AAAGTTGGTGACCGGAGGAT+CGG 0.584022 7.1:-19506983 MS.gene067802:CDS
TGTTGGAGCCGTTAAAGACA+AGG 0.584144 7.1:-19505309 MS.gene067802:CDS
GCGTAACCGTCTTCGATTGG+CGG 0.588487 7.1:+19507627 None:intergenic
AGAGAGGATAGGCACACGGC+GGG 0.589663 7.1:+19507335 None:intergenic
TTTCCTCTTCAATCTTCGCA+AGG 0.590215 7.1:+19507103 None:intergenic
TCCCTTGAAGCTATGACTCA+AGG 0.591282 7.1:-19505386 MS.gene067802:CDS
ACAATAGCAGCCTGACGTGA+AGG 0.596610 7.1:+19507372 None:intergenic
ATGCCACCATCAGCAATGAC+AGG 0.596778 7.1:+19505872 None:intergenic
CCTGGATCTAAGAAGGTCAT+GGG 0.598715 7.1:+19505202 None:intergenic
AAATGTTGTTGCTTTGGTGA+AGG 0.599445 7.1:-19507064 MS.gene067802:CDS
GTTCCTGTCATTGCTGATGG+TGG 0.600022 7.1:-19505875 MS.gene067802:CDS
GCAAAGCTTAAAATTGCCCA+AGG 0.602956 7.1:-19505335 MS.gene067802:CDS
TGACCTTGCGAAGATTGAAG+AGG 0.605198 7.1:-19507106 MS.gene067802:CDS
CAAAGCTTAAAATTGCCCAA+GGG 0.607807 7.1:-19505334 MS.gene067802:CDS
TACCTCTAGCCTTAACACCC+TGG 0.607961 7.1:+19505184 None:intergenic
TGTAGTGAGGGAGGAAGATG+AGG 0.611469 7.1:+19507559 None:intergenic
TCCATAGGAGAAGCGACGAA+GGG 0.611484 7.1:+19507471 None:intergenic
ATCCAGGGTGTTAAGGCTAG+AGG 0.611715 7.1:-19505186 MS.gene067802:intron
CGGCGAAGTCGATGTAGTGA+GGG 0.612539 7.1:+19507547 None:intergenic
GCGGCGAAGTCGATGTAGTG+AGG 0.613902 7.1:+19507546 None:intergenic
TACGACTGAGACGGGAGGAG+AGG 0.614422 7.1:+19507511 None:intergenic
GGCAGTGATCAAAGGTACCT+CGG 0.616960 7.1:-19505365 MS.gene067802:CDS
GGAGCATCGACTGTTATGAT+GGG 0.618284 7.1:-19505812 MS.gene067802:CDS
GCCTTGAGTCATAGCTTCAA+GGG 0.619235 7.1:+19505385 None:intergenic
GCGACGAAGGGAGTTGAAAG+GGG 0.619315 7.1:+19507483 None:intergenic
TACTACTCAGGAAGTTTGCG+CGG 0.625490 7.1:-19506680 MS.gene067802:CDS
GTTGGAGCCGTTAAAGACAA+GGG 0.626283 7.1:-19505308 MS.gene067802:CDS
GAGGAAGATGAGGTCATCGT+AGG 0.626293 7.1:+19507569 None:intergenic
TTGGTCCAATCGAAATGACA+AGG 0.627219 7.1:-19507184 MS.gene067802:CDS
AAAGCTTAAAATTGCCCAAG+GGG 0.628138 7.1:-19505333 MS.gene067802:CDS
AACAGCGATACCACCAAGTG+CGG 0.631904 7.1:+19507413 None:intergenic
CTCCACCGGGTTCTCTACCG+TGG 0.633134 7.1:-19507134 MS.gene067802:CDS
TATCCAAAGTTGGTGACCGG+AGG 0.637764 7.1:-19506988 MS.gene067802:CDS
TTTGGTGAAGGATGAAGAGG+TGG 0.638094 7.1:-19507052 MS.gene067802:CDS
GGCCATGGCAGAAGCCATAG+AGG 0.638566 7.1:+19507434 None:intergenic
CGAAGTCGATGTAGTGAGGG+AGG 0.643395 7.1:+19507550 None:intergenic
CCACCAATAACATCCAACTC+AGG 0.643921 7.1:+19506790 None:intergenic
GAGAGTTTCCGATTATATGG+AGG 0.644523 7.1:-19507157 MS.gene067802:CDS
CGACGAAGGGAGTTGAAAGG+GGG 0.648483 7.1:+19507484 None:intergenic
CGAGGGAACAAGATAAGGAG+AGG 0.649099 7.1:-19506918 MS.gene067802:CDS
ACCATGCAAGCAGTAAGGCA+AGG 0.650696 7.1:-19505260 MS.gene067802:CDS
TCAGAATCGATTACTGCCGA+AGG 0.651499 7.1:+19507294 None:intergenic
GCCAATCGAAGACGGTTACG+CGG 0.652065 7.1:-19507625 MS.gene067802:CDS
GAAAGCTGGTGTGAATGCTG+TGG 0.657777 7.1:-19506881 MS.gene067802:CDS
GGAGCAGCACAGGTTGAAGG+AGG 0.660899 7.1:-19504152 MS.gene067802:CDS
CTGAGTTGGATGTTATTGGT+GGG 0.662829 7.1:-19506789 MS.gene067802:CDS
TTCGCAAGGTCAGAGTTCCA+CGG 0.665644 7.1:+19507117 None:intergenic
AAAACCGGTTCAGAGAGGAT+AGG 0.681418 7.1:+19507324 None:intergenic
GGAGAGGTCGACTTCATCAG+CGG 0.694285 7.1:+19507527 None:intergenic
TGGTCCAATCGAAATGACAA+GGG 0.694909 7.1:-19507183 MS.gene067802:CDS
AGACGAAAACCGGTTCAGAG+AGG 0.695318 7.1:+19507319 None:intergenic
GGATTTGGTGACAAAAGAGG+AGG 0.695676 7.1:-19507028 MS.gene067802:CDS
GATGTTACGACTGAGACGGG+AGG 0.697292 7.1:+19507506 None:intergenic
GTTCAGAGAGGATAGGCACA+CGG 0.728183 7.1:+19507331 None:intergenic
AATCGAAGACGGTTACGCGG+CGG 0.728337 7.1:-19507622 MS.gene067802:CDS
TAAGCTTTGCTGTATCACCG+AGG 0.732907 7.1:+19505348 None:intergenic
CAGAGAGGATAGGCACACGG+CGG 0.750161 7.1:+19507334 None:intergenic
TTCCACGGTAGAGAACCCGG+TGG 0.809206 7.1:+19507132 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATCACTATAATATATTTT+AGG + chr7.1:19507100-19507119 None:intergenic 10.0%
!! AAGAAAATATTGAAGATAAA+AGG - chr7.1:19505663-19505682 MS.gene067802:intron 15.0%
!! AGAAAATATTGAAGATAAAA+GGG - chr7.1:19505664-19505683 MS.gene067802:intron 15.0%
!!! ACCTTTTTAAAATAGTATTT+CGG - chr7.1:19506107-19506126 MS.gene067802:intron 15.0%
!! AAAACAAAGATAATCATTTG+AGG + chr7.1:19507404-19507423 None:intergenic 20.0%
!! AATTGAGTAACATTACATAT+TGG + chr7.1:19507550-19507569 None:intergenic 20.0%
!! CTTGAATTGAAAAACAAAAT+AGG - chr7.1:19507211-19507230 MS.gene067802:CDS 20.0%
!! GATTCTGTTACTAAAATAAA+AGG + chr7.1:19504505-19504524 None:intergenic 20.0%
!! TAAAAAAAATCCAAGTAGTT+GGG - chr7.1:19507176-19507195 MS.gene067802:CDS 20.0%
!! TACAAAAAATTATTGCTAGT+GGG + chr7.1:19507447-19507466 None:intergenic 20.0%
!! TATTTATGAAACTAAATGAC+AGG + chr7.1:19506269-19506288 None:intergenic 20.0%
!! TTTCACTAAACTATTAGAAT+AGG - chr7.1:19505452-19505471 MS.gene067802:intron 20.0%
!! TTTCATTTACACAATCAAAA+TGG - chr7.1:19506656-19506675 MS.gene067802:intron 20.0%
!!! ACCGAAATACTATTTTAAAA+AGG + chr7.1:19506111-19506130 None:intergenic 20.0%
!!! ACTTATTTTATCTTATCTAC+TGG + chr7.1:19505399-19505418 None:intergenic 20.0%
!!! GTCTTTTTTACAAAATAGAT+AGG + chr7.1:19506929-19506948 None:intergenic 20.0%
!!! TAAAAAAGACAAAAGTATAG+TGG - chr7.1:19506939-19506958 MS.gene067802:CDS 20.0%
!!! TTCTTGTTTAAAGAATGAAA+TGG + chr7.1:19506818-19506837 None:intergenic 20.0%
!!! TTTATTTTAGTAACAGAATC+CGG - chr7.1:19504505-19504524 MS.gene067802:intron 20.0%
!!! TTTTTTACAAAATAGATAGG+AGG + chr7.1:19506926-19506945 None:intergenic 20.0%
! AAAAGATTATGAGACCAAAT+TGG + chr7.1:19507491-19507510 None:intergenic 25.0%
! AAAGTTAGGAAACTAGTAAT+AGG - chr7.1:19506752-19506771 MS.gene067802:CDS 25.0%
! AAATGAAACAGCTACAATAA+CGG + chr7.1:19506644-19506663 None:intergenic 25.0%
! AATTCTACTGGAAAATTTCT+CGG - chr7.1:19504529-19504548 MS.gene067802:intron 25.0%
! AGAAAATCATCACTATCTAA+AGG + chr7.1:19505701-19505720 None:intergenic 25.0%
! AGATGATTAAATTCTTACTG+AGG - chr7.1:19506153-19506172 MS.gene067802:intron 25.0%
! AGGGAATTCTATTTATCAAT+TGG - chr7.1:19504912-19504931 MS.gene067802:intron 25.0%
! ATACTTATGGATATAAAAGC+CGG + chr7.1:19506722-19506741 None:intergenic 25.0%
! CTAAAAAAAATCCAAGTAGT+TGG - chr7.1:19507175-19507194 MS.gene067802:CDS 25.0%
! CTACAAAAAATTATTGCTAG+TGG + chr7.1:19507448-19507467 None:intergenic 25.0%
! GCAAGAAATAAATAAGAACT+CGG + chr7.1:19506603-19506622 None:intergenic 25.0%
! GTAAGTTGTTTAACCAAATA+TGG + chr7.1:19505227-19505246 None:intergenic 25.0%
!! AAATTTTCCAGTAGAATTAC+CGG + chr7.1:19504527-19504546 None:intergenic 25.0%
!! CTTCAATATTTTCTTGAGAA+TGG + chr7.1:19505658-19505677 None:intergenic 25.0%
!! TGTCATTTGAACATACATTA+GGG - chr7.1:19506968-19506987 MS.gene067802:CDS 25.0%
!! TTCTTATTTATTTCTTGCTC+TGG - chr7.1:19506605-19506624 MS.gene067802:intron 25.0%
!!! ATAATCTTTTGAAGACACAA+TGG - chr7.1:19507501-19507520 MS.gene067802:CDS 25.0%
!!! TATTTTTTTTTGCACCAGAA+TGG - chr7.1:19506314-19506333 MS.gene067802:intron 25.0%
AAACATATGCATGCATAACA+GGG + chr7.1:19505299-19505318 None:intergenic 30.0%
AAACTAAATGACAGGAAACA+AGG + chr7.1:19506261-19506280 None:intergenic 30.0%
AAACTCTGGTCATATTGTAA+AGG - chr7.1:19505908-19505927 MS.gene067802:CDS 30.0%
AAAGCTCAAAATATCACGTA+CGG + chr7.1:19505435-19505454 None:intergenic 30.0%
AACAACATATGACATCTAAG+TGG + chr7.1:19505338-19505357 None:intergenic 30.0%
AAGCTTCAAATCTTACGAAA+AGG + chr7.1:19506054-19506073 None:intergenic 30.0%
AATATTGAGTCTGTTTGACA+GGG - chr7.1:19505813-19505832 MS.gene067802:CDS 30.0%
ACAATTCACAAGATTTCATC+AGG + chr7.1:19506026-19506045 None:intergenic 30.0%
AGACTCAATATTAAGAGTCA+GGG + chr7.1:19505805-19505824 None:intergenic 30.0%
ATGTCATCTAAGAACCAATT+TGG - chr7.1:19507474-19507493 MS.gene067802:CDS 30.0%
ATTTCTCCAACAAATAGAAG+TGG - chr7.1:19507003-19507022 MS.gene067802:CDS 30.0%
GATGATTAAGTATGTGAAGA+AGG - chr7.1:19504936-19504955 MS.gene067802:intron 30.0%
GTAATATTGTGCCTAAAATG+CGG - chr7.1:19505502-19505521 MS.gene067802:intron 30.0%
GTATTCACACAAAACACTTA+TGG + chr7.1:19507313-19507332 None:intergenic 30.0%
GTATTTCGGTTAGAAATTGA+TGG - chr7.1:19506121-19506140 MS.gene067802:intron 30.0%
GTCATTTGAACATACATTAG+GGG - chr7.1:19506969-19506988 MS.gene067802:CDS 30.0%
TAATATTGAGTCTGTTTGAC+AGG - chr7.1:19505812-19505831 MS.gene067802:CDS 30.0%
TCATCCATTGCTTATAAAAG+TGG - chr7.1:19505855-19505874 MS.gene067802:CDS 30.0%
TGAGTAACATTACATATTGG+TGG + chr7.1:19507547-19507566 None:intergenic 30.0%
TGATGAAATCTTGTGAATTG+TGG - chr7.1:19506025-19506044 MS.gene067802:intron 30.0%
TGTTATGCATGCATATGTTT+GGG - chr7.1:19505299-19505318 MS.gene067802:CDS 30.0%
TTTCATAAGTTGTCCCAAAT+AGG - chr7.1:19505357-19505376 MS.gene067802:CDS 30.0%
! AAATGGAAATGTTGTTGCTT+TGG - chr7.1:19504684-19504703 MS.gene067802:intron 30.0%
! ATTGATTTAATCCTTTCCAG+TGG + chr7.1:19507151-19507170 None:intergenic 30.0%
! ATTGTAAAGGCTTTATCGTT+GGG - chr7.1:19505921-19505940 MS.gene067802:CDS 30.0%
! GTCAAAAAGTATAGAGGAAT+GGG - chr7.1:19506344-19506363 MS.gene067802:intron 30.0%
! TATTGTAAAGGCTTTATCGT+TGG - chr7.1:19505920-19505939 MS.gene067802:CDS 30.0%
! TGTCAAAAAGTATAGAGGAA+TGG - chr7.1:19506343-19506362 MS.gene067802:intron 30.0%
!! AACTCCACTTTTATAAGCAA+TGG + chr7.1:19505862-19505881 None:intergenic 30.0%
!! GTGTCATTTGAACATACATT+AGG - chr7.1:19506967-19506986 MS.gene067802:CDS 30.0%
!! TTTTTCGAACAATAGCAGTT+TGG - chr7.1:19507420-19507439 MS.gene067802:CDS 30.0%
!!! ACTGAGGTGTTGTTTTTATT+TGG - chr7.1:19506169-19506188 MS.gene067802:intron 30.0%
!!! ATACACATAGCTTTTTTCAC+CGG - chr7.1:19506700-19506719 MS.gene067802:CDS 30.0%
!!! GTTTTGTTTCAAAGACCAAT+TGG - chr7.1:19504551-19504570 MS.gene067802:intron 30.0%
!!! GTTTTTATTTGGTGTGGATA+TGG - chr7.1:19506180-19506199 MS.gene067802:intron 30.0%
AAAGCTTAAAATTGCCCAAG+GGG - chr7.1:19506421-19506440 MS.gene067802:intron 35.0%
AAGATTTCTTTCCACTGGAA+AGG - chr7.1:19507137-19507156 MS.gene067802:CDS 35.0%
AATGAAATGGCTCAGAAAAC+AGG + chr7.1:19506805-19506824 None:intergenic 35.0%
ACCAAATATGGTCACAATCA+AGG + chr7.1:19505215-19505234 None:intergenic 35.0%
AGGTAAGTGTAATTGAAGAC+AGG + chr7.1:19506906-19506925 None:intergenic 35.0%
ATATCCATAAGTATTACCCG+TGG - chr7.1:19506728-19506747 MS.gene067802:CDS 35.0%
ATCTACTGGCATCAACATTT+GGG + chr7.1:19505385-19505404 None:intergenic 35.0%
ATGAAATGGCTCAGAAAACA+GGG + chr7.1:19506804-19506823 None:intergenic 35.0%
ATTGAAGATAAAAGGGTCAG+AGG - chr7.1:19505671-19505690 MS.gene067802:intron 35.0%
CAAACATATGCATGCATAAC+AGG + chr7.1:19505300-19505319 None:intergenic 35.0%
CAAAGCTTAAAATTGCCCAA+GGG - chr7.1:19506420-19506439 MS.gene067802:intron 35.0%
CAAATTCCAGATATTGCTCA+AGG - chr7.1:19505779-19505798 MS.gene067802:CDS 35.0%
CACTGTGATGTAATTGTTGA+TGG - chr7.1:19507240-19507259 MS.gene067802:CDS 35.0%
CAGACTCAATATTAAGAGTC+AGG + chr7.1:19505806-19505825 None:intergenic 35.0%
CTGTTATGCATGCATATGTT+TGG - chr7.1:19505298-19505317 MS.gene067802:CDS 35.0%
GAGGAAATGAAGAAGAGAAA+TGG - chr7.1:19504667-19504686 MS.gene067802:intron 35.0%
GTAACAAGATTTCTTTCCAC+TGG - chr7.1:19507132-19507151 MS.gene067802:CDS 35.0%
GTAACATTACATATTGGTGG+AGG + chr7.1:19507544-19507563 None:intergenic 35.0%
TACATTGCTTACTCTTCCTT+TGG - chr7.1:19506229-19506248 MS.gene067802:intron 35.0%
TATCTACTGGCATCAACATT+TGG + chr7.1:19505386-19505405 None:intergenic 35.0%
TTCATATAAACTCCCCAGAT+TGG - chr7.1:19507348-19507367 MS.gene067802:CDS 35.0%
TTGTAGCAACAAAGGATCAT+TGG + chr7.1:19505572-19505591 None:intergenic 35.0%
! ATCTTTTGCATACCAATCTG+GGG + chr7.1:19507363-19507382 None:intergenic 35.0%
! CAACGTGTCAAAAAGTATAG+AGG - chr7.1:19506338-19506357 MS.gene067802:intron 35.0%
! CACAAGATTTCATCAGGTTT+TGG + chr7.1:19506020-19506039 None:intergenic 35.0%
! CTAGTTTCCTAACTTTTCCA+CGG + chr7.1:19506748-19506767 None:intergenic 35.0%
! GATCTTTTGCATACCAATCT+GGG + chr7.1:19507364-19507383 None:intergenic 35.0%
! TAGTTTCCTAACTTTTCCAC+GGG + chr7.1:19506747-19506766 None:intergenic 35.0%
! TATCCTGAGTTGGATGTTAT+TGG - chr7.1:19504961-19504980 MS.gene067802:intron 35.0%
! TGATCTTTTGCATACCAATC+TGG + chr7.1:19507365-19507384 None:intergenic 35.0%
! TGGTTCTATTTGTACTACTC+AGG - chr7.1:19505062-19505081 MS.gene067802:intron 35.0%
! TTTTCCACGGGTAATACTTA+TGG + chr7.1:19506735-19506754 None:intergenic 35.0%
!! AAATGTTGTTGCTTTGGTGA+AGG - chr7.1:19504690-19504709 MS.gene067802:intron 35.0%
!! AGGCAAGGTTTTCAAGATAT+TGG - chr7.1:19506509-19506528 MS.gene067802:intron 35.0%
!! ATGTAATTGTTGATGGTCCA+AGG - chr7.1:19507247-19507266 MS.gene067802:CDS 35.0%
!! CTCTATACTTTTTGACACGT+TGG + chr7.1:19506340-19506359 None:intergenic 35.0%
!! TGTAATTGTTGATGGTCCAA+GGG - chr7.1:19507248-19507267 MS.gene067802:CDS 35.0%
!! TTTGAACAGTTTGTTGCATC+TGG - chr7.1:19505149-19505168 MS.gene067802:intron 35.0%
!!! GGTGTTGTTTTTATTTGGTG+TGG - chr7.1:19506174-19506193 MS.gene067802:intron 35.0%
!!! TGGTTTTGGATAGTTCTCAA+GGG - chr7.1:19504893-19504912 MS.gene067802:intron 35.0%
ACAGAATCCGGTAATTCTAC+TGG - chr7.1:19504517-19504536 MS.gene067802:intron 40.0%
ACCTGATATACATAAGCTCC+AGG + chr7.1:19505996-19506015 None:intergenic 40.0%
ACGGCTTATTGTAGCAACAA+AGG + chr7.1:19505580-19505599 None:intergenic 40.0%
ATCGTAGGTGTAAGAGAAAC+CGG + chr7.1:19504173-19504192 None:intergenic 40.0%
ATTGTTCCACTCCAATGTCA+GGG + chr7.1:19505620-19505639 None:intergenic 40.0%
CAACATTTGGGAGCCTATTT+GGG + chr7.1:19505373-19505392 None:intergenic 40.0%
CACAGAACCCTTGTCTTTAA+CGG + chr7.1:19506456-19506475 None:intergenic 40.0%
CACTGACCACTTCTATTTGT+TGG + chr7.1:19507012-19507031 None:intergenic 40.0%
CATATACCATGCAAGCAGTA+AGG - chr7.1:19506489-19506508 MS.gene067802:intron 40.0%
CGTGAGAGTTTCCGATTATA+TGG - chr7.1:19504594-19504613 MS.gene067802:intron 40.0%
CTTACTGCTTGCATGGTATA+TGG + chr7.1:19506491-19506510 None:intergenic 40.0%
GAAGAAGGTTTATCCTGAGT+TGG - chr7.1:19504951-19504970 MS.gene067802:intron 40.0%
GAGAGTTTCCGATTATATGG+AGG - chr7.1:19504597-19504616 MS.gene067802:intron 40.0%
GCAAAGCTTAAAATTGCCCA+AGG - chr7.1:19506419-19506438 MS.gene067802:intron 40.0%
GCCTTGATTGTGACCATATT+TGG - chr7.1:19505211-19505230 MS.gene067802:CDS 40.0%
GCTGAGAATTTGATTCAAGC+TGG - chr7.1:19505009-19505028 MS.gene067802:intron 40.0%
GGAAACAAGGAAAACACCAA+AGG + chr7.1:19506248-19506267 None:intergenic 40.0%
GTATTACCCGTGGAAAAGTT+AGG - chr7.1:19506738-19506757 MS.gene067802:CDS 40.0%
GTCATTTCGATTGGACCAAT+TGG + chr7.1:19504569-19504588 None:intergenic 40.0%
GTTTACAGAACCCAACTACT+TGG + chr7.1:19507189-19507208 None:intergenic 40.0%
TCAACATTTGGGAGCCTATT+TGG + chr7.1:19505374-19505393 None:intergenic 40.0%
TCCTGGAGCTTATGTATATC+AGG - chr7.1:19505992-19506011 MS.gene067802:intron 40.0%
TGGTCCAATCGAAATGACAA+GGG - chr7.1:19504571-19504590 MS.gene067802:intron 40.0%
TTAACACCCTGGATCTAAGA+AGG + chr7.1:19506562-19506581 None:intergenic 40.0%
TTGGTCCAATCGAAATGACA+AGG - chr7.1:19504570-19504589 MS.gene067802:intron 40.0%
TTGTTGCTACAATAAGCCGT+GGG - chr7.1:19505580-19505599 MS.gene067802:intron 40.0%
TTTCCTCTTCAATCTTCGCA+AGG + chr7.1:19504654-19504673 None:intergenic 40.0%
TTTGTTGCTACAATAAGCCG+TGG - chr7.1:19505579-19505598 MS.gene067802:intron 40.0%
! AATATCACGTACGGCTTGTT+TGG + chr7.1:19505426-19505445 None:intergenic 40.0%
! CTGAGTTGGATGTTATTGGT+GGG - chr7.1:19504965-19504984 MS.gene067802:intron 40.0%
! TAAGGAGAGGTTAGAGCATT+TGG - chr7.1:19504849-19504868 MS.gene067802:intron 40.0%
! TGTCTTTTAAGCACGACTGA+GGG - chr7.1:19507061-19507080 MS.gene067802:CDS 40.0%
! TTAGAGCATTTGGTGAAAGC+TGG - chr7.1:19504859-19504878 MS.gene067802:intron 40.0%
! TTCTTAGATCCAGGGTGTTA+AGG - chr7.1:19506561-19506580 MS.gene067802:intron 40.0%
! TTGATTCAAGCTGGTGTTGA+TGG - chr7.1:19505018-19505037 MS.gene067802:intron 40.0%
!! GTAATTGTTGATGGTCCAAG+GGG - chr7.1:19507249-19507268 MS.gene067802:CDS 40.0%
!! TAATTGTTGATGGTCCAAGG+GGG - chr7.1:19507250-19507269 MS.gene067802:CDS 40.0%
!! TGATTCAAGCTGGTGTTGAT+GGG - chr7.1:19505019-19505038 MS.gene067802:intron 40.0%
!! TGGCTTTGGATTGTTGTTGT+AGG - chr7.1:19505169-19505188 MS.gene067802:intron 40.0%
!!! GTGGTTTTGGATAGTTCTCA+AGG - chr7.1:19504892-19504911 MS.gene067802:intron 40.0%
AAAATTGCCCAAGGGGTTGT+TGG - chr7.1:19506428-19506447 MS.gene067802:intron 45.0%
CATTATCTGCTTTGTCCACC+AGG - chr7.1:19507571-19507590 MS.gene067802:CDS 45.0%
CCACCAATAACATCCAACTC+AGG + chr7.1:19504967-19504986 None:intergenic 45.0%
CCATGACCTTCTTAGATCCA+GGG - chr7.1:19506553-19506572 MS.gene067802:intron 45.0%
CCTGGATCTAAGAAGGTCAT+GGG + chr7.1:19506555-19506574 None:intergenic 45.0%
GACAAAAGAGGAGGTTGAGA+GGG - chr7.1:19504735-19504754 MS.gene067802:intron 45.0%
GATTGTTCCACTCCAATGTC+AGG + chr7.1:19505621-19505640 None:intergenic 45.0%
GCCTTGAGTCATAGCTTCAA+GGG + chr7.1:19506372-19506391 None:intergenic 45.0%
GTGTGTCTCACCATTCTCAT+GGG + chr7.1:19506882-19506901 None:intergenic 45.0%
GTTGGAGCCGTTAAAGACAA+GGG - chr7.1:19506446-19506465 MS.gene067802:intron 45.0%
TAACAACACTCCTTCACGTC+AGG - chr7.1:19504372-19504391 MS.gene067802:intron 45.0%
TACTACTCAGGAAGTTTGCG+CGG - chr7.1:19505074-19505093 MS.gene067802:intron 45.0%
TCAGAATCGATTACTGCCGA+AGG + chr7.1:19504463-19504482 None:intergenic 45.0%
TCCCTTGAAGCTATGACTCA+AGG - chr7.1:19506368-19506387 MS.gene067802:intron 45.0%
TGAAGGAGGAATTCATGGAC+TGG - chr7.1:19507616-19507635 MS.gene067802:CDS 45.0%
TGACAAAAGAGGAGGTTGAG+AGG - chr7.1:19504734-19504753 MS.gene067802:intron 45.0%
TGACCTTGCGAAGATTGAAG+AGG - chr7.1:19504648-19504667 MS.gene067802:intron 45.0%
TGACTCAAGGCAGTGATCAA+AGG - chr7.1:19506381-19506400 MS.gene067802:intron 45.0%
TGCCTTGAGTCATAGCTTCA+AGG + chr7.1:19506373-19506392 None:intergenic 45.0%
TGCTTTGGTGAAGGATGAAG+AGG - chr7.1:19504699-19504718 MS.gene067802:intron 45.0%
TGTTGCTACAATAAGCCGTG+GGG - chr7.1:19505581-19505600 MS.gene067802:intron 45.0%
TGTTGGAGCCGTTAAAGACA+AGG - chr7.1:19506445-19506464 MS.gene067802:intron 45.0%
TTTGGTGAAGGATGAAGAGG+TGG - chr7.1:19504702-19504721 MS.gene067802:intron 45.0%
! AAAACCGGTTCAGAGAGGAT+AGG + chr7.1:19504433-19504452 None:intergenic 45.0%
! ACAGGGAACTGCTGTTTACA+AGG - chr7.1:19505830-19505849 MS.gene067802:CDS 45.0%
! ATGATGGGAAGCTTCTTAGC+TGG - chr7.1:19505957-19505976 MS.gene067802:intron 45.0%
! CAGGTTGAAGGAGGAATTCA+TGG - chr7.1:19507611-19507630 MS.gene067802:CDS 45.0%
! CCTGAGTTGGATGTTATTGG+TGG - chr7.1:19504964-19504983 MS.gene067802:intron 45.0%
! CTTCTTAGCTGGTAGTCTTG+AGG - chr7.1:19505968-19505987 MS.gene067802:intron 45.0%
! GTGTCTTTTAAGCACGACTG+AGG - chr7.1:19507060-19507079 MS.gene067802:CDS 45.0%
! TAAGCTTTGCTGTATCACCG+AGG + chr7.1:19506409-19506428 None:intergenic 45.0%
! TGCAGTCACAACCGCATTTT+AGG + chr7.1:19505516-19505535 None:intergenic 45.0%
! TGGTGTGAATGCTGTGGTTT+TGG - chr7.1:19504879-19504898 MS.gene067802:intron 45.0%
! TTTGAAGCTTGTGTCGTGTG+TGG - chr7.1:19506064-19506083 MS.gene067802:intron 45.0%
! TTTTGACACGTTGGCCATTC+TGG + chr7.1:19506331-19506350 None:intergenic 45.0%
!! CAGTTTGTTGCATCTGGCTT+TGG - chr7.1:19505155-19505174 MS.gene067802:intron 45.0%
!! GATGGGTTGAGAGTTGGTAT+GGG - chr7.1:19505036-19505055 MS.gene067802:intron 45.0%
!! GGAGCATCGACTGTTATGAT+GGG - chr7.1:19505942-19505961 MS.gene067802:intron 45.0%
!! GGATTTGGTGACAAAAGAGG+AGG - chr7.1:19504726-19504745 MS.gene067802:intron 45.0%
!! GGTGGATTTGGTGACAAAAG+AGG - chr7.1:19504723-19504742 MS.gene067802:intron 45.0%
!! TGACGTGAAGGAGTGTTGTT+AGG + chr7.1:19504373-19504392 None:intergenic 45.0%
!! TGATGGGTTGAGAGTTGGTA+TGG - chr7.1:19505035-19505054 MS.gene067802:intron 45.0%
!! TTGAGAGTTGGTATGGGATC+TGG - chr7.1:19505042-19505061 MS.gene067802:intron 45.0%
AACAGCGATACCACCAAGTG+CGG + chr7.1:19504344-19504363 None:intergenic 50.0%
AAGCGACGAAGGGAGTTGAA+AGG + chr7.1:19504276-19504295 None:intergenic 50.0%
ACAATAGCAGCCTGACGTGA+AGG + chr7.1:19504385-19504404 None:intergenic 50.0%
ACCATGCAAGCAGTAAGGCA+AGG - chr7.1:19506494-19506513 MS.gene067802:intron 50.0%
ACCTTGCCTTACTGCTTGCA+TGG + chr7.1:19506498-19506517 None:intergenic 50.0%
ACGAAGACAAGAATCCCCCT+TGG + chr7.1:19507267-19507286 None:intergenic 50.0%
AGCGACGAAGGGAGTTGAAA+GGG + chr7.1:19504275-19504294 None:intergenic 50.0%
ATCCTCTATGGCTTCTGCCA+TGG - chr7.1:19504318-19504337 MS.gene067802:intron 50.0%
ATGCCACCATCAGCAATGAC+AGG + chr7.1:19505885-19505904 None:intergenic 50.0%
CACTGTCTCCGAATCCTCTA+TGG - chr7.1:19504306-19504325 MS.gene067802:intron 50.0%
CAGCTCATCTCCCATGAGAA+TGG - chr7.1:19506869-19506888 MS.gene067802:CDS 50.0%
CCCATGACCTTCTTAGATCC+AGG - chr7.1:19506552-19506571 MS.gene067802:intron 50.0%
CCCTGGATCTAAGAAGGTCA+TGG + chr7.1:19506556-19506575 None:intergenic 50.0%
CGAGGGAACAAGATAAGGAG+AGG - chr7.1:19504836-19504855 MS.gene067802:intron 50.0%
CGATTATATGGAGGCTCCAC+CGG - chr7.1:19504606-19504625 MS.gene067802:intron 50.0%
CGGTGGAGCCTCCATATAAT+CGG + chr7.1:19504608-19504627 None:intergenic 50.0%
CGTGTGTCTCACCATTCTCA+TGG + chr7.1:19506883-19506902 None:intergenic 50.0%
GAAAGCTGGTGTGAATGCTG+TGG - chr7.1:19504873-19504892 MS.gene067802:intron 50.0%
GAGGAAGATGAGGTCATCGT+AGG + chr7.1:19504188-19504207 None:intergenic 50.0%
GATTATATGGAGGCTCCACC+GGG - chr7.1:19504607-19504626 MS.gene067802:intron 50.0%
GATTCGGAGACAGTGTCCAT+AGG + chr7.1:19504301-19504320 None:intergenic 50.0%
GGAGTTCCTGTCATTGCTGA+TGG - chr7.1:19505876-19505895 MS.gene067802:CDS 50.0%
GGCAGAAGCCATAGAGGATT+CGG + chr7.1:19504317-19504336 None:intergenic 50.0%
GGGTGTTAAGGCTAGAGGTA+TGG - chr7.1:19506573-19506592 MS.gene067802:intron 50.0%
GGTGAGAGGCTATCCAAAGT+TGG - chr7.1:19504756-19504775 MS.gene067802:intron 50.0%
GTTCAGAGAGGATAGGCACA+CGG + chr7.1:19504426-19504445 None:intergenic 50.0%
GTTCCTGTCATTGCTGATGG+TGG - chr7.1:19505879-19505898 MS.gene067802:CDS 50.0%
TCAGGGCCTTGAGCAATATC+TGG + chr7.1:19505788-19505807 None:intergenic 50.0%
TCCATAGGAGAAGCGACGAA+GGG + chr7.1:19504286-19504305 None:intergenic 50.0%
TGGGACGAGGGAACAAGATA+AGG - chr7.1:19504831-19504850 MS.gene067802:intron 50.0%
TGTAGTGAGGGAGGAAGATG+AGG + chr7.1:19504198-19504217 None:intergenic 50.0%
TGTGCCTATCCTCTCTGAAC+CGG - chr7.1:19504426-19504445 MS.gene067802:intron 50.0%
TGTGTGGCATACCCTGACAT+TGG - chr7.1:19505606-19505625 MS.gene067802:intron 50.0%
TTCGCAAGGTCAGAGTTCCA+CGG + chr7.1:19504640-19504659 None:intergenic 50.0%
TTTGTCCACCAGGTTCGTAC+TGG - chr7.1:19507581-19507600 MS.gene067802:CDS 50.0%
! AGACGAAAACCGGTTCAGAG+AGG + chr7.1:19504438-19504457 None:intergenic 50.0%
! ATCCAGGGTGTTAAGGCTAG+AGG - chr7.1:19506568-19506587 MS.gene067802:intron 50.0%
! CACGCCCTTGTCATTTCGAT+TGG + chr7.1:19504578-19504597 None:intergenic 50.0%
! GATGGTGGCATCTCAAACTC+TGG - chr7.1:19505894-19505913 MS.gene067802:CDS 50.0%
! GCGGAGAAGCTTTTCAACAC+CGG - chr7.1:19504151-19504170 MS.gene067802:CDS 50.0%
!! AAAGTTGGTGACCGGAGGAT+CGG - chr7.1:19504771-19504790 MS.gene067802:intron 50.0%
!! ACCGGTTTTCGTCTCTCCTT+CGG - chr7.1:19504444-19504463 MS.gene067802:intron 50.0%
!! GGATGAAGAGGTGGTGGATT+TGG - chr7.1:19504711-19504730 MS.gene067802:intron 50.0%
!! GGCAGTGATCAAAGGTACCT+CGG - chr7.1:19506389-19506408 MS.gene067802:intron 50.0%
!! GGCTATCCAAAGTTGGTGAC+CGG - chr7.1:19504763-19504782 MS.gene067802:intron 50.0%
!! GGGAGCATCGACTGTTATGA+TGG - chr7.1:19505941-19505960 MS.gene067802:intron 50.0%
!! GGTGTTGATGGGTTGAGAGT+TGG - chr7.1:19505030-19505049 MS.gene067802:intron 50.0%
!! TACCTCTAGCCTTAACACCC+TGG + chr7.1:19506573-19506592 None:intergenic 50.0%
!! TATCCAAAGTTGGTGACCGG+AGG - chr7.1:19504766-19504785 MS.gene067802:intron 50.0%
AACGGCTCCAACAACCCCTT+GGG + chr7.1:19506438-19506457 None:intergenic 55.0%
AATAAGCCGTGGGGCTTGTG+TGG - chr7.1:19505590-19505609 MS.gene067802:intron 55.0%
AATCGAAGACGGTTACGCGG+CGG - chr7.1:19504132-19504151 MS.gene067802:CDS 55.0%
ACTCAGGAAGTTTGCGCGGT+TGG - chr7.1:19505078-19505097 MS.gene067802:intron 55.0%
ACTCCTCCGCCAATCGAAGA+CGG - chr7.1:19504121-19504140 MS.gene067802:CDS 55.0%
ATGGGCAGACTGCAGAGAGT+TGG + chr7.1:19506537-19506556 None:intergenic 55.0%
CACGTCAGGCTGCTATTGTC+CGG - chr7.1:19504386-19504405 MS.gene067802:intron 55.0%
CGAAGTCGATGTAGTGAGGG+AGG + chr7.1:19504207-19504226 None:intergenic 55.0%
CGACGAAGGGAGTTGAAAGG+GGG + chr7.1:19504273-19504292 None:intergenic 55.0%
CGGCGAAGTCGATGTAGTGA+GGG + chr7.1:19504210-19504229 None:intergenic 55.0%
CTCAGGAAGTTTGCGCGGTT+GGG - chr7.1:19505079-19505098 MS.gene067802:intron 55.0%
GAGTTCCACGGTAGAGAACC+CGG + chr7.1:19504628-19504647 None:intergenic 55.0%
GATCCTCCGGTCACCAACTT+TGG + chr7.1:19504772-19504791 None:intergenic 55.0%
GATGTTACGACTGAGACGGG+AGG + chr7.1:19504251-19504270 None:intergenic 55.0%
GCCAATCGAAGACGGTTACG+CGG - chr7.1:19504129-19504148 MS.gene067802:CDS 55.0%
GCCGAAGGAGAGACGAAAAC+CGG + chr7.1:19504448-19504467 None:intergenic 55.0%
GCGACGAAGGGAGTTGAAAG+GGG + chr7.1:19504274-19504293 None:intergenic 55.0%
GCGTAACCGTCTTCGATTGG+CGG + chr7.1:19504130-19504149 None:intergenic 55.0%
GGCATACCCTGACATTGGAG+TGG - chr7.1:19505611-19505630 MS.gene067802:intron 55.0%
GGGGATGTTACGACTGAGAC+GGG + chr7.1:19504254-19504273 None:intergenic 55.0%
GGGGGATGTTACGACTGAGA+CGG + chr7.1:19504255-19504274 None:intergenic 55.0%
GGTGAAGGATGAAGAGGTGG+TGG - chr7.1:19504705-19504724 MS.gene067802:intron 55.0%
GTCCATAGGAGAAGCGACGA+AGG + chr7.1:19504287-19504306 None:intergenic 55.0%
TAACCGTCTTCGATTGGCGG+AGG + chr7.1:19504127-19504146 None:intergenic 55.0%
TAACGGCTCCAACAACCCCT+TGG + chr7.1:19506439-19506458 None:intergenic 55.0%
TCCCTTCGTCGCTTCTCCTA+TGG - chr7.1:19504282-19504301 MS.gene067802:intron 55.0%
! ACTGGAGCAGCACAGGTTGA+AGG - chr7.1:19507599-19507618 MS.gene067802:CDS 55.0%
! GGAGAGGTCGACTTCATCAG+CGG + chr7.1:19504230-19504249 None:intergenic 55.0%
AGAGAGGATAGGCACACGGC+GGG + chr7.1:19504422-19504441 None:intergenic 60.0%
CAGAGAGGATAGGCACACGG+CGG + chr7.1:19504423-19504442 None:intergenic 60.0%
CGGATGGAGAGTGGATGGTG+GGG - chr7.1:19504800-19504819 MS.gene067802:intron 60.0%
CTGCTCCAGTACGAACCTGG+TGG + chr7.1:19507589-19507608 None:intergenic 60.0%
GAGGAGGTTGAGAGGGTGAG+AGG - chr7.1:19504742-19504761 MS.gene067802:intron 60.0%
GATACCACCAAGTGCGGCCA+TGG + chr7.1:19504338-19504357 None:intergenic 60.0%
GCCGCGTAACCGTCTTCGAT+TGG + chr7.1:19504133-19504152 None:intergenic 60.0%
GCGGATGGAGAGTGGATGGT+GGG - chr7.1:19504799-19504818 MS.gene067802:intron 60.0%
GCGGCGAAGTCGATGTAGTG+AGG + chr7.1:19504211-19504230 None:intergenic 60.0%
GGCCATGGCAGAAGCCATAG+AGG + chr7.1:19504323-19504342 None:intergenic 60.0%
GGTATGCCACACAAGCCCCA+CGG + chr7.1:19505599-19505618 None:intergenic 60.0%
GGTTCGTACTGGAGCAGCAC+AGG - chr7.1:19507592-19507611 MS.gene067802:CDS 60.0%
TACGACTGAGACGGGAGGAG+AGG + chr7.1:19504246-19504265 None:intergenic 60.0%
TGGTGACCGGAGGATCGGTT+GGG - chr7.1:19504776-19504795 MS.gene067802:intron 60.0%
TTCCACGGTAGAGAACCCGG+TGG + chr7.1:19504625-19504644 None:intergenic 60.0%
! GCTGGTAGTCTTGAGGCTCC+TGG - chr7.1:19505975-19505994 MS.gene067802:intron 60.0%
! GGAGCAGCACAGGTTGAAGG+AGG - chr7.1:19507602-19507621 MS.gene067802:CDS 60.0%
! GGATGGAGAGTGGATGGTGG+GGG - chr7.1:19504801-19504820 MS.gene067802:intron 60.0%
! GTGCTGCTCCAGTACGAACC+TGG + chr7.1:19507592-19507611 None:intergenic 60.0%
! TTGGTGACCGGAGGATCGGT+TGG - chr7.1:19504775-19504794 MS.gene067802:intron 60.0%
ATCCGCCCCAACCGATCCTC+CGG + chr7.1:19504785-19504804 None:intergenic 65.0%
CTCCACCGGGTTCTCTACCG+TGG - chr7.1:19504620-19504639 MS.gene067802:intron 65.0%
GAAGTTTGCGCGGTTGGGCG+TGG - chr7.1:19505084-19505103 MS.gene067802:intron 65.0%
GATAGGCACACGGCGGGACT+TGG + chr7.1:19504416-19504435 None:intergenic 65.0%
GCTTCTGCCATGGCCGCACT+TGG - chr7.1:19504328-19504347 MS.gene067802:intron 65.0%
GGCGGATGGAGAGTGGATGG+TGG - chr7.1:19504798-19504817 MS.gene067802:intron 65.0%
GGTGACCGGAGGATCGGTTG+GGG - chr7.1:19504777-19504796 MS.gene067802:intron 65.0%
TCTGCCATGGCCGCACTTGG+TGG - chr7.1:19504331-19504350 MS.gene067802:intron 65.0%
TGGGGCGGATGGAGAGTGGA+TGG - chr7.1:19504795-19504814 MS.gene067802:intron 65.0%
!! GGATGGTGGGGGCGGCTATT+GGG - chr7.1:19504812-19504831 MS.gene067802:intron 65.0%
!! TGGAGAGTGGATGGTGGGGG+CGG - chr7.1:19504804-19504823 MS.gene067802:intron 65.0%
!! TGGATGGTGGGGGCGGCTAT+TGG - chr7.1:19504811-19504830 MS.gene067802:intron 65.0%
CACGGCGGGACTTGGCAGTC+CGG + chr7.1:19504408-19504427 None:intergenic 70.0%
CGGTTGGGGCGGATGGAGAG+TGG - chr7.1:19504791-19504810 MS.gene067802:intron 70.0%
GACCGGAGGATCGGTTGGGG+CGG - chr7.1:19504780-19504799 MS.gene067802:intron 70.0%
GGAGGATCGGTTGGGGCGGA+TGG - chr7.1:19504784-19504803 MS.gene067802:intron 70.0%
GGGGGCGGCTATTGGGACGA+GGG - chr7.1:19504819-19504838 MS.gene067802:intron 70.0%
TGGGGGCGGCTATTGGGACG+AGG - chr7.1:19504818-19504837 MS.gene067802:intron 70.0%
TTGCGCGGTTGGGCGTGGTC+AGG - chr7.1:19505089-19505108 MS.gene067802:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 19504112 19507664 19504112 ID=MS.gene067802
chr7.1 mRNA 19504112 19507664 19504112 ID=MS.gene067802.t1;Parent=MS.gene067802
chr7.1 exon 19506666 19507664 19506666 ID=MS.gene067802.t1.exon1;Parent=MS.gene067802.t1
chr7.1 CDS 19506666 19507664 19506666 ID=cds.MS.gene067802.t1;Parent=MS.gene067802.t1
chr7.1 exon 19505763 19505942 19505763 ID=MS.gene067802.t1.exon2;Parent=MS.gene067802.t1
chr7.1 CDS 19505763 19505942 19505763 ID=cds.MS.gene067802.t1;Parent=MS.gene067802.t1
chr7.1 exon 19505187 19505444 19505187 ID=MS.gene067802.t1.exon3;Parent=MS.gene067802.t1
chr7.1 CDS 19505187 19505444 19505187 ID=cds.MS.gene067802.t1;Parent=MS.gene067802.t1
chr7.1 exon 19504112 19504183 19504112 ID=MS.gene067802.t1.exon4;Parent=MS.gene067802.t1
chr7.1 CDS 19504112 19504183 19504112 ID=cds.MS.gene067802.t1;Parent=MS.gene067802.t1
Gene Sequence

>MS.gene067802

ATGGATTTCACTCCTCCGCCAATCGAAGACGGTTACGCGGCGGAGAAGCTTTTCAACACCGGTTTCTCTTACACCTACGATGACCTCATCTTCCTCCCTCACTACATCGACTTCGCCGCTGATGAAGTCGACCTCTCCTCCCGTCTCAGTCGTAACATCCCCCTTTCAACTCCCTTCGTCGCTTCTCCTATGGACACTGTCTCCGAATCCTCTATGGCTTCTGCCATGGCCGCACTTGGTGGTATCGCTGTTATTCATCCTAACAACACTCCTTCACGTCAGGCTGCTATTGTCCGGACTGCCAAGTCCCGCCGTGTGCCTATCCTCTCTGAACCGGTTTTCGTCTCTCCTTCGGCAGTAATCGATTCTGAAGACGATTTCGCTGATTCACCTTTTATTTTAGTAACAGAATCCGGTAATTCTACTGGAAAATTTCTCGGTTTTGTTTCAAAGACCAATTGGTCCAATCGAAATGACAAGGGCGTGAGAGTTTCCGATTATATGGAGGCTCCACCGGGTTCTCTACCGTGGAACTCTGACCTTGCGAAGATTGAAGAGGAAATGAAGAAGAGAAATGGAAATGTTGTTGCTTTGGTGAAGGATGAAGAGGTGGTGGATTTGGTGACAAAAGAGGAGGTTGAGAGGGTGAGAGGCTATCCAAAGTTGGTGACCGGAGGATCGGTTGGGGCGGATGGAGAGTGGATGGTGGGGGCGGCTATTGGGACGAGGGAACAAGATAAGGAGAGGTTAGAGCATTTGGTGAAAGCTGGTGTGAATGCTGTGGTTTTGGATAGTTCTCAAGGGAATTCTATTTATCAATTGGAGATGATTAAGTATGTGAAGAAGGTTTATCCTGAGTTGGATGTTATTGGTGGGAATGTTGTTACTATGTATCAAGCTGAGAATTTGATTCAAGCTGGTGTTGATGGGTTGAGAGTTGGTATGGGATCTGGTTCTATTTGTACTACTCAGGAAGTTTGCGCGGTTGGGCGTGGTCAGGTATATAGTCTTGTCTTTGTTGTCTTTTATGATCAAAGTTTGAACAGTTTGTTGCATCTGGCTTTGGATTGTTGTTGTAGGTGTGTTTTCAGTTGACAAAGCCTTGATTGTGACCATATTTGGTTAAACAACTTACACGAGAGCTTATCATATAAGTGCTTATGTATCACACAAAGTTAACATAACCCTGTTATGCATGCATATGTTTGGGTCAAATTGACACGCCACTTAGATGTCATATGTTGTTTTCATAAGTTGTCCCAAATAGGCTCCCAAATGTTGATGCCAGTAGATAAGATAAAATAAGTCAGTCCAAACAAGCCGTACGTGATATTTTGAGCTTTCACTAAACTATTAGAATAGGATTGAGAAAATATCTTGCATTGCAATTGTAATATTGTGCCTAAAATGCGGTTGTGACTGCATATATAAATATTTCATATAATGTTCAATTCTTACCAATGATCCTTTGTTGCTACAATAAGCCGTGGGGCTTGTGTGGCATACCCTGACATTGGAGTGGAACAATCTCTTCTTTCTATAACCATTCTCAAGAAAATATTGAAGATAAAAGGGTCAGAGGTGAACCTTTAGATAGTGATGATTTTCTCACTTGTATAACACAAACTTTTGAAGTTATTACTTTTAACATTTCATGTTCTTGCTAACAAATTCCAGATATTGCTCAAGGCCCTGACTCTTAATATTGAGTCTGTTTGACAGGGAACTGCTGTTTACAAGGTCTCATCCATTGCTTATAAAAGTGGAGTTCCTGTCATTGCTGATGGTGGCATCTCAAACTCTGGTCATATTGTAAAGGCTTTATCGTTGGGAGCATCGACTGTTATGATGGGAAGCTTCTTAGCTGGTAGTCTTGAGGCTCCTGGAGCTTATGTATATCAGGTACCAAAACCTGATGAAATCTTGTGAATTGTGGTAGCCTTTTCGTAAGATTTGAAGCTTGTGTCGTGTGTGGATGAAAGTGTTGTACTGAAAACCTTTTTAAAATAGTATTTCGGTTAGAAATTGATGGCTAATGAAAAGATGATTAAATTCTTACTGAGGTGTTGTTTTTATTTGGTGTGGATATGGAAACAACTATACTATAATAAAATTTTTACATTGCTTACTCTTCCTTTGGTGTTTTCCTTGTTTCCTGTCATTTAGTTTCATAAATACACTTGTAACATGCATAGCTGTTTTTATTTTTTTTTGCACCAGAATGGCCAACGTGTCAAAAAGTATAGAGGAATGGGTTCCCTTGAAGCTATGACTCAAGGCAGTGATCAAAGGTACCTCGGTGATACAGCAAAGCTTAAAATTGCCCAAGGGGTTGTTGGAGCCGTTAAAGACAAGGGTTCTGTGTTGAAGTTCATTCCATATACCATGCAAGCAGTAAGGCAAGGTTTTCAAGATATTGGTGCCAACTCTCTGCAGTCTGCCCATGACCTTCTTAGATCCAGGGTGTTAAGGCTAGAGGTATGGTTGACCGAGTTCTTATTTATTTCTTGCTCTGGTTATTAGCATAATCCGTTATTGTAGCTGTTTCATTTACACAATCAAAATGGTTGATGTCTTCTATTTAACTCATACACATAGCTTTTTTCACCGGCTTTTATATCCATAAGTATTACCCGTGGAAAAGTTAGGAAACTAGTAATAGGATAAAGTAACTCTAAAATTATAAAAGCCCTGTTTTCTGAGCCATTTCATTCTTTAAACAAGAAAACATGAAAAAGCTAAAATATAAGAGAAATTCAGCTCATCTCCCATGAGAATGGTGAGACACACGCCTGTCTTCAATTACACTTACCTCCTATCTATTTTGTAAAAAAGACAAAAGTATAGTGGTGTGCGTGTCATTTGAACATACATTAGGGGAAGTTAGTGCAATTTCTCCAACAAATAGAAGTGGTCAGTGTGTTTGTTTAATTATAAAAGTGATGTGTGTGTCTTTTAAGCACGACTGAGGGTAGTGCTATTTTTCCTAAAATATATTATAGTGATATTTTAATTGATTTGTAACAAGATTTCTTTCCACTGGAAAGGATTAAATCAATGAGACTAAAAAAAATCCAAGTAGTTGGGTTCTGTAAACATCTTGAATTGAAAAACAAAATAGGAGAAAGCACTGTGATGTAATTGTTGATGGTCCAAGGGGGATTCTTGTCTTCGTCTGATCATGCAATTTGCTAGAATCCATAAGTGTTTTGTGTGAATACAACTTTGCTTGAGATTTCATATAAACTCCCCAGATTGGTATGCAAAAGATCATTAACATCAAATTAGTCCTCAAATGATTATCTTTGTTTTTCGAACAATAGCAGTTTGGTCCCACTAGCAATAATTTTTTGTAGTTAAAAATGTCATCTAAGAACCAATTTGGTCTCATAATCTTTTGAAGACACAATGGATTCTCTAAACATCTTTCCTCCACCAATATGTAATGTTACTCAATTACATTATCTGCTTTGTCCACCAGGTTCGTACTGGAGCAGCACAGGTTGAAGGAGGAATTCATGGACTGGTTTCTTATGAAAAGAAATACTTTTGA

Protein sequence

>MS.gene067802.t1

MDFTPPPIEDGYAAEKLFNTGFSYTYDDLIFLPHYIDFAADEVDLSSRLSRNIPLSTPFVASPMDTVSESSMASAMAALGGIAVIHPNNTPSRQAAIVRTAKSRRVPILSEPVFVSPSAVIDSEDDFADSPFILVTESGNSTGKFLGFVSKTNWSNRNDKGVRVSDYMEAPPGSLPWNSDLAKIEEEMKKRNGNVVALVKDEEVVDLVTKEEVERVRGYPKLVTGGSVGADGEWMVGAAIGTREQDKERLEHLVKAGVNAVVLDSSQGNSIYQLEMIKYVKKVYPELDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQGTAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYVYQNGQRVKKYRGMGSLEAMTQGSDQRYLGDTAKLKIAQGVVGAVKDKGSVLKFIPYTMQAVRQGFQDIGANSLQSAHDLLRSRVLRLEVRTGAAQVEGGIHGLVSYEKKYF