Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068902.t1 | XP_003595386.1 | 98.5 | 527 | 8 | 0 | 1 | 527 | 1 | 527 | 4.40E-285 | 989.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068902.t1 | Q43062 | 65.4 | 523 | 173 | 4 | 9 | 527 | 4 | 522 | 5.5e-196 | 685.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068902.t1 | G7IQB6 | 98.5 | 527 | 8 | 0 | 1 | 527 | 1 | 527 | 3.1e-285 | 989.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene068902 | 0.816435 | 5.54E-52 | -1.69E-46 |
MS.gene049356 | MS.gene068902 | 0.817517 | 3.16E-52 | -1.69E-46 |
MS.gene049369 | MS.gene068902 | 0.806082 | 9.78E-50 | -1.69E-46 |
MS.gene049427 | MS.gene068902 | 0.804213 | 2.41E-49 | -1.69E-46 |
MS.gene049661 | MS.gene068902 | 0.803126 | 4.05E-49 | -1.69E-46 |
MS.gene049828 | MS.gene068902 | 0.865815 | 4.49E-65 | -1.69E-46 |
MS.gene049907 | MS.gene068902 | 0.828742 | 7.59E-55 | -1.69E-46 |
MS.gene050163 | MS.gene068902 | 0.8039 | 2.80E-49 | -1.69E-46 |
MS.gene050432 | MS.gene068902 | 0.836463 | 9.22E-57 | -1.69E-46 |
MS.gene050520 | MS.gene068902 | 0.830127 | 3.50E-55 | -1.69E-46 |
MS.gene050581 | MS.gene068902 | 0.827051 | 1.94E-54 | -1.69E-46 |
MS.gene050767 | MS.gene068902 | 0.845769 | 3.30E-59 | -1.69E-46 |
MS.gene050770 | MS.gene068902 | 0.847747 | 9.51E-60 | -1.69E-46 |
MS.gene05101 | MS.gene068902 | 0.816448 | 5.50E-52 | -1.69E-46 |
MS.gene051228 | MS.gene068902 | 0.814142 | 1.79E-51 | -1.69E-46 |
MS.gene051666 | MS.gene068902 | 0.819368 | 1.20E-52 | -1.69E-46 |
MS.gene052271 | MS.gene068902 | 0.840372 | 9.05E-58 | -1.69E-46 |
MS.gene052290 | MS.gene068902 | 0.842811 | 2.06E-58 | -1.69E-46 |
MS.gene052326 | MS.gene068902 | 0.812371 | 4.38E-51 | -1.69E-46 |
MS.gene052379 | MS.gene068902 | 0.810358 | 1.20E-50 | -1.69E-46 |
MS.gene052421 | MS.gene068902 | 0.800595 | 1.34E-48 | -1.69E-46 |
MS.gene053009 | MS.gene068902 | 0.866789 | 2.21E-65 | -1.69E-46 |
MS.gene053104 | MS.gene068902 | 0.800713 | 1.27E-48 | -1.69E-46 |
MS.gene053207 | MS.gene068902 | 0.806267 | 8.94E-50 | -1.69E-46 |
MS.gene053213 | MS.gene068902 | 0.808749 | 2.66E-50 | -1.69E-46 |
MS.gene053286 | MS.gene068902 | 0.802549 | 5.32E-49 | -1.69E-46 |
MS.gene053322 | MS.gene068902 | 0.840565 | 8.06E-58 | -1.69E-46 |
MS.gene053632 | MS.gene068902 | 0.834949 | 2.23E-56 | -1.69E-46 |
MS.gene053813 | MS.gene068902 | 0.851533 | 8.34E-61 | -1.69E-46 |
MS.gene053916 | MS.gene068902 | 0.801038 | 1.09E-48 | -1.69E-46 |
MS.gene054123 | MS.gene068902 | 0.823626 | 1.25E-53 | -1.69E-46 |
MS.gene054376 | MS.gene068902 | 0.835555 | 1.57E-56 | -1.69E-46 |
MS.gene054642 | MS.gene068902 | 0.818547 | 1.85E-52 | -1.69E-46 |
MS.gene054802 | MS.gene068902 | 0.826364 | 2.83E-54 | -1.69E-46 |
MS.gene054803 | MS.gene068902 | 0.827173 | 1.81E-54 | -1.69E-46 |
MS.gene054804 | MS.gene068902 | 0.832312 | 1.02E-55 | -1.69E-46 |
MS.gene05505 | MS.gene068902 | 0.82416 | 9.38E-54 | -1.69E-46 |
MS.gene055254 | MS.gene068902 | 0.840067 | 1.09E-57 | -1.69E-46 |
MS.gene055397 | MS.gene068902 | 0.860988 | 1.41E-63 | -1.69E-46 |
MS.gene055499 | MS.gene068902 | 0.847812 | 9.13E-60 | -1.69E-46 |
MS.gene055647 | MS.gene068902 | 0.834981 | 2.19E-56 | -1.69E-46 |
MS.gene055722 | MS.gene068902 | 0.822187 | 2.71E-53 | -1.69E-46 |
MS.gene055802 | MS.gene068902 | 0.829889 | 4.00E-55 | -1.69E-46 |
MS.gene05592 | MS.gene068902 | 0.833584 | 4.90E-56 | -1.69E-46 |
MS.gene05602 | MS.gene068902 | 0.803363 | 3.61E-49 | -1.69E-46 |
MS.gene056374 | MS.gene068902 | 0.81209 | 5.05E-51 | -1.69E-46 |
MS.gene056609 | MS.gene068902 | 0.820767 | 5.76E-53 | -1.69E-46 |
MS.gene05664 | MS.gene068902 | 0.805259 | 1.46E-49 | -1.69E-46 |
MS.gene05666 | MS.gene068902 | 0.809476 | 1.86E-50 | -1.69E-46 |
MS.gene056931 | MS.gene068902 | 0.808831 | 2.55E-50 | -1.69E-46 |
MS.gene056933 | MS.gene068902 | 0.807403 | 5.14E-50 | -1.69E-46 |
MS.gene056935 | MS.gene068902 | 0.801 | 1.11E-48 | -1.69E-46 |
MS.gene057129 | MS.gene068902 | 0.852411 | 4.70E-61 | -1.69E-46 |
MS.gene057146 | MS.gene068902 | 0.815817 | 7.61E-52 | -1.69E-46 |
MS.gene057285 | MS.gene068902 | 0.829226 | 5.80E-55 | -1.69E-46 |
MS.gene057295 | MS.gene068902 | 0.804999 | 1.65E-49 | -1.69E-46 |
MS.gene05735 | MS.gene068902 | 0.81568 | 8.17E-52 | -1.69E-46 |
MS.gene057416 | MS.gene068902 | 0.823553 | 1.30E-53 | -1.69E-46 |
MS.gene057926 | MS.gene068902 | 0.807752 | 4.33E-50 | -1.69E-46 |
MS.gene058293 | MS.gene068902 | 0.82015 | 7.99E-53 | -1.69E-46 |
MS.gene058459 | MS.gene068902 | 0.801577 | 8.43E-49 | -1.69E-46 |
MS.gene058660 | MS.gene068902 | 0.834221 | 3.40E-56 | -1.69E-46 |
MS.gene058993 | MS.gene068902 | 0.801919 | 7.18E-49 | -1.69E-46 |
MS.gene059536 | MS.gene068902 | 0.803315 | 3.70E-49 | -1.69E-46 |
MS.gene059676 | MS.gene068902 | 0.810495 | 1.12E-50 | -1.69E-46 |
MS.gene059688 | MS.gene068902 | 0.817403 | 3.36E-52 | -1.69E-46 |
MS.gene059692 | MS.gene068902 | 0.817997 | 2.47E-52 | -1.69E-46 |
MS.gene059695 | MS.gene068902 | 0.816024 | 6.84E-52 | -1.69E-46 |
MS.gene059711 | MS.gene068902 | 0.860968 | 1.43E-63 | -1.69E-46 |
MS.gene059718 | MS.gene068902 | 0.800601 | 1.33E-48 | -1.69E-46 |
MS.gene05986 | MS.gene068902 | 0.821794 | 3.34E-53 | -1.69E-46 |
MS.gene059960 | MS.gene068902 | 0.827804 | 1.28E-54 | -1.69E-46 |
MS.gene060356 | MS.gene068902 | 0.878258 | 3.25E-69 | -1.69E-46 |
MS.gene060804 | MS.gene068902 | 0.815881 | 7.36E-52 | -1.69E-46 |
MS.gene060818 | MS.gene068902 | 0.819065 | 1.41E-52 | -1.69E-46 |
MS.gene060837 | MS.gene068902 | 0.82326 | 1.52E-53 | -1.69E-46 |
MS.gene061041 | MS.gene068902 | 0.809132 | 2.20E-50 | -1.69E-46 |
MS.gene061051 | MS.gene068902 | -0.814974 | 1.17E-51 | -1.69E-46 |
MS.gene061200 | MS.gene068902 | 0.870608 | 1.28E-66 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068902.t1 | MTR_2g044880 | 98.482 | 527 | 8 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1087 |
MS.gene068902.t1 | MTR_4g087980 | 70.021 | 477 | 139 | 3 | 51 | 527 | 46 | 518 | 0.0 | 716 |
MS.gene068902.t1 | MTR_4g087970 | 62.971 | 478 | 173 | 2 | 51 | 527 | 45 | 519 | 0.0 | 653 |
MS.gene068902.t1 | MTR_7g112580 | 48.117 | 478 | 220 | 9 | 61 | 525 | 80 | 542 | 1.03e-157 | 460 |
MS.gene068902.t1 | MTR_7g050870 | 52.703 | 444 | 190 | 9 | 92 | 525 | 121 | 554 | 7.14e-156 | 456 |
MS.gene068902.t1 | MTR_1g008140 | 48.718 | 468 | 213 | 8 | 85 | 525 | 140 | 607 | 1.74e-154 | 454 |
MS.gene068902.t1 | MTR_7g108905 | 48.643 | 442 | 213 | 5 | 92 | 521 | 113 | 552 | 8.57e-151 | 443 |
MS.gene068902.t1 | MTR_3g091380 | 45.473 | 486 | 239 | 6 | 61 | 525 | 117 | 597 | 3.03e-150 | 443 |
MS.gene068902.t1 | MTR_4g025690 | 51.230 | 447 | 198 | 6 | 81 | 525 | 85 | 513 | 2.39e-149 | 438 |
MS.gene068902.t1 | MTR_7g050980 | 51.577 | 444 | 195 | 9 | 92 | 525 | 122 | 555 | 2.56e-149 | 439 |
MS.gene068902.t1 | MTR_7g050950 | 50.787 | 445 | 204 | 9 | 88 | 525 | 117 | 553 | 8.25e-149 | 438 |
MS.gene068902.t1 | MTR_8g023310 | 48.802 | 459 | 205 | 6 | 92 | 525 | 136 | 589 | 1.18e-141 | 421 |
MS.gene068902.t1 | MTR_1g083520 | 44.382 | 534 | 259 | 13 | 19 | 525 | 6 | 528 | 6.19e-140 | 414 |
MS.gene068902.t1 | MTR_4g025730 | 45.562 | 507 | 242 | 9 | 30 | 525 | 26 | 509 | 7.77e-140 | 413 |
MS.gene068902.t1 | MTR_8g104655 | 46.458 | 480 | 215 | 8 | 71 | 525 | 79 | 541 | 3.43e-139 | 413 |
MS.gene068902.t1 | MTR_8g104645 | 55.714 | 350 | 143 | 3 | 188 | 525 | 23 | 372 | 1.89e-137 | 402 |
MS.gene068902.t1 | MTR_8g042900 | 45.233 | 451 | 226 | 5 | 86 | 525 | 141 | 581 | 6.72e-137 | 408 |
MS.gene068902.t1 | MTR_8g042910 | 45.833 | 480 | 208 | 11 | 92 | 527 | 143 | 614 | 8.89e-133 | 399 |
MS.gene068902.t1 | MTR_3g010770 | 58.917 | 314 | 125 | 2 | 215 | 525 | 263 | 575 | 1.79e-132 | 397 |
MS.gene068902.t1 | MTR_4g124520 | 47.395 | 403 | 201 | 7 | 130 | 525 | 123 | 521 | 2.61e-132 | 395 |
MS.gene068902.t1 | MTR_2g044810 | 39.781 | 548 | 293 | 12 | 1 | 525 | 1 | 534 | 2.63e-132 | 395 |
MS.gene068902.t1 | MTR_3g008640 | 49.275 | 414 | 199 | 7 | 118 | 525 | 119 | 527 | 8.99e-132 | 394 |
MS.gene068902.t1 | MTR_3g008700 | 48.786 | 412 | 204 | 6 | 118 | 525 | 119 | 527 | 9.91e-132 | 393 |
MS.gene068902.t1 | MTR_1g054880 | 45.877 | 473 | 207 | 8 | 92 | 525 | 96 | 558 | 1.25e-131 | 394 |
MS.gene068902.t1 | MTR_7g053360 | 49.029 | 412 | 203 | 6 | 118 | 525 | 119 | 527 | 1.78e-131 | 393 |
MS.gene068902.t1 | MTR_1g088020 | 45.267 | 486 | 216 | 10 | 80 | 525 | 80 | 555 | 1.87e-130 | 391 |
MS.gene068902.t1 | MTR_3g008720 | 48.792 | 414 | 201 | 7 | 118 | 525 | 119 | 527 | 9.93e-130 | 388 |
MS.gene068902.t1 | MTR_4g025670 | 46.173 | 405 | 200 | 4 | 130 | 525 | 94 | 489 | 8.43e-129 | 384 |
MS.gene068902.t1 | MTR_7g108875 | 46.055 | 469 | 213 | 10 | 92 | 525 | 101 | 564 | 1.83e-128 | 386 |
MS.gene068902.t1 | MTR_3g010780 | 42.889 | 450 | 238 | 6 | 86 | 525 | 134 | 574 | 4.90e-128 | 385 |
MS.gene068902.t1 | MTR_7g108900 | 44.989 | 469 | 222 | 8 | 91 | 525 | 94 | 560 | 5.01e-128 | 385 |
MS.gene068902.t1 | MTR_3g033690 | 48.544 | 412 | 205 | 6 | 118 | 525 | 118 | 526 | 3.41e-127 | 382 |
MS.gene068902.t1 | MTR_1g088225 | 44.856 | 486 | 216 | 11 | 80 | 525 | 80 | 553 | 1.23e-125 | 379 |
MS.gene068902.t1 | MTR_1g086210 | 42.827 | 467 | 229 | 9 | 92 | 525 | 108 | 569 | 2.39e-124 | 376 |
MS.gene068902.t1 | MTR_7g108890 | 46.637 | 446 | 191 | 9 | 122 | 525 | 122 | 562 | 5.39e-123 | 372 |
MS.gene068902.t1 | MTR_4g035980 | 46.569 | 408 | 201 | 5 | 130 | 525 | 137 | 539 | 2.06e-122 | 370 |
MS.gene068902.t1 | MTR_1g086190 | 42.232 | 457 | 236 | 9 | 92 | 525 | 112 | 563 | 2.39e-120 | 365 |
MS.gene068902.t1 | MTR_1g083510 | 40.506 | 474 | 242 | 8 | 86 | 524 | 114 | 582 | 2.99e-118 | 361 |
MS.gene068902.t1 | MTR_4g124550 | 40.404 | 495 | 263 | 9 | 49 | 525 | 113 | 593 | 2.08e-115 | 353 |
MS.gene068902.t1 | MTR_8g023150 | 43.046 | 453 | 233 | 8 | 86 | 521 | 134 | 578 | 2.90e-114 | 350 |
MS.gene068902.t1 | MTR_7g112590 | 40.340 | 471 | 244 | 8 | 86 | 524 | 117 | 582 | 1.49e-113 | 349 |
MS.gene068902.t1 | MTR_0458s0030 | 59.023 | 266 | 107 | 2 | 260 | 525 | 51 | 314 | 1.54e-113 | 339 |
MS.gene068902.t1 | MTR_1g088040 | 59.023 | 266 | 107 | 2 | 260 | 525 | 51 | 314 | 1.54e-113 | 339 |
MS.gene068902.t1 | MTR_7g110560 | 35.756 | 509 | 298 | 9 | 36 | 525 | 51 | 549 | 1.13e-112 | 345 |
MS.gene068902.t1 | MTR_1g083470 | 39.474 | 456 | 249 | 9 | 86 | 521 | 118 | 566 | 1.65e-109 | 338 |
MS.gene068902.t1 | MTR_1g083500 | 39.474 | 456 | 249 | 9 | 86 | 521 | 118 | 566 | 1.65e-109 | 338 |
MS.gene068902.t1 | MTR_7g110490 | 39.958 | 473 | 235 | 11 | 92 | 527 | 108 | 568 | 8.70e-107 | 331 |
MS.gene068902.t1 | MTR_7g110510 | 39.958 | 473 | 235 | 11 | 92 | 527 | 108 | 568 | 8.70e-107 | 331 |
MS.gene068902.t1 | MTR_1g083490 | 38.326 | 454 | 257 | 7 | 86 | 521 | 123 | 571 | 1.38e-106 | 330 |
MS.gene068902.t1 | MTR_4g005170 | 38.546 | 454 | 256 | 8 | 86 | 521 | 123 | 571 | 2.28e-106 | 332 |
MS.gene068902.t1 | MTR_4g005180 | 38.106 | 454 | 258 | 7 | 86 | 521 | 105 | 553 | 1.29e-105 | 328 |
MS.gene068902.t1 | MTR_8g104580 | 40.000 | 480 | 213 | 10 | 71 | 525 | 71 | 500 | 1.32e-105 | 325 |
MS.gene068902.t1 | MTR_2g436040 | 35.556 | 495 | 297 | 8 | 38 | 522 | 61 | 543 | 4.35e-104 | 325 |
MS.gene068902.t1 | MTR_7g110440 | 39.241 | 474 | 237 | 11 | 92 | 527 | 108 | 568 | 7.18e-104 | 323 |
MS.gene068902.t1 | MTR_2g044660 | 51.923 | 312 | 145 | 4 | 214 | 525 | 326 | 632 | 1.31e-103 | 324 |
MS.gene068902.t1 | MTR_2g044810 | 53.360 | 253 | 117 | 1 | 273 | 525 | 214 | 465 | 1.36e-99 | 308 |
MS.gene068902.t1 | MTR_0618s0020 | 57.709 | 227 | 96 | 0 | 299 | 525 | 2 | 228 | 4.35e-96 | 291 |
MS.gene068902.t1 | MTR_4g120290 | 36.941 | 425 | 244 | 6 | 122 | 524 | 149 | 571 | 4.53e-96 | 303 |
MS.gene068902.t1 | MTR_4g120280 | 37.650 | 417 | 236 | 6 | 130 | 524 | 157 | 571 | 6.13e-96 | 303 |
MS.gene068902.t1 | MTR_8g093460 | 38.085 | 470 | 228 | 13 | 92 | 524 | 107 | 550 | 1.93e-94 | 298 |
MS.gene068902.t1 | MTR_2g039530 | 52.077 | 313 | 131 | 7 | 182 | 491 | 22 | 318 | 9.35e-93 | 286 |
MS.gene068902.t1 | MTR_8g088610 | 43.917 | 337 | 177 | 6 | 192 | 522 | 43 | 373 | 1.08e-91 | 285 |
MS.gene068902.t1 | MTR_7g110420 | 36.402 | 478 | 257 | 11 | 92 | 527 | 108 | 580 | 1.43e-90 | 289 |
MS.gene068902.t1 | MTR_2g436050 | 33.820 | 479 | 281 | 7 | 80 | 524 | 87 | 563 | 6.95e-89 | 284 |
MS.gene068902.t1 | MTR_3g095920 | 38.605 | 430 | 218 | 11 | 130 | 524 | 145 | 563 | 5.76e-88 | 281 |
MS.gene068902.t1 | MTR_5g083620 | 41.369 | 336 | 190 | 5 | 195 | 525 | 23 | 356 | 1.36e-83 | 264 |
MS.gene068902.t1 | MTR_0458s0010 | 37.988 | 487 | 213 | 16 | 80 | 525 | 80 | 518 | 1.16e-81 | 264 |
MS.gene068902.t1 | MTR_7g110430 | 34.038 | 473 | 229 | 12 | 92 | 527 | 108 | 534 | 3.17e-80 | 261 |
MS.gene068902.t1 | MTR_2g105560 | 34.985 | 323 | 195 | 5 | 204 | 525 | 31 | 339 | 1.83e-68 | 224 |
MS.gene068902.t1 | MTR_7g107180 | 37.821 | 312 | 182 | 4 | 215 | 525 | 7 | 307 | 5.78e-68 | 221 |
MS.gene068902.t1 | MTR_7g111560 | 34.590 | 451 | 256 | 12 | 95 | 525 | 125 | 556 | 1.92e-67 | 228 |
MS.gene068902.t1 | MTR_7g092780 | 38.141 | 312 | 171 | 5 | 215 | 516 | 90 | 389 | 5.18e-60 | 203 |
MS.gene068902.t1 | MTR_6g012800 | 33.115 | 305 | 180 | 5 | 215 | 509 | 6 | 296 | 1.63e-51 | 178 |
MS.gene068902.t1 | MTR_1g086540 | 34.056 | 323 | 188 | 7 | 202 | 514 | 37 | 344 | 2.26e-51 | 179 |
MS.gene068902.t1 | MTR_7g102600 | 34.056 | 323 | 193 | 5 | 199 | 514 | 84 | 393 | 3.89e-51 | 180 |
MS.gene068902.t1 | MTR_6g024165 | 35.077 | 325 | 181 | 9 | 202 | 514 | 28 | 334 | 1.76e-50 | 176 |
MS.gene068902.t1 | MTR_6g042660 | 34.416 | 308 | 175 | 6 | 185 | 487 | 11 | 296 | 3.06e-50 | 175 |
MS.gene068902.t1 | MTR_6g088810 | 33.739 | 329 | 185 | 8 | 199 | 514 | 69 | 377 | 1.93e-49 | 175 |
MS.gene068902.t1 | MTR_8g102380 | 32.194 | 351 | 196 | 9 | 188 | 514 | 45 | 377 | 1.10e-48 | 172 |
MS.gene068902.t1 | MTR_5g095490 | 35.294 | 306 | 171 | 6 | 221 | 514 | 67 | 357 | 2.46e-46 | 166 |
MS.gene068902.t1 | MTR_7g011530 | 31.683 | 303 | 183 | 4 | 217 | 509 | 8 | 296 | 1.10e-45 | 163 |
MS.gene068902.t1 | MTR_6g042690 | 34.386 | 285 | 155 | 6 | 215 | 487 | 39 | 303 | 3.73e-45 | 162 |
MS.gene068902.t1 | MTR_2g033970 | 32.399 | 321 | 196 | 6 | 201 | 515 | 42 | 347 | 1.11e-44 | 161 |
MS.gene068902.t1 | MTR_1g033050 | 33.456 | 272 | 161 | 4 | 223 | 487 | 26 | 284 | 3.37e-44 | 159 |
MS.gene068902.t1 | MTR_8g102380 | 33.559 | 295 | 157 | 7 | 188 | 458 | 45 | 324 | 1.72e-43 | 157 |
MS.gene068902.t1 | MTR_8g036225 | 33.123 | 317 | 177 | 8 | 215 | 517 | 33 | 328 | 2.62e-42 | 154 |
MS.gene068902.t1 | MTR_5g093970 | 32.012 | 328 | 200 | 6 | 196 | 514 | 16 | 329 | 6.77e-42 | 153 |
MS.gene068902.t1 | MTR_5g083590 | 31.090 | 312 | 164 | 4 | 215 | 525 | 7 | 268 | 3.57e-41 | 149 |
MS.gene068902.t1 | MTR_5g012600 | 29.874 | 318 | 196 | 6 | 212 | 517 | 60 | 362 | 5.33e-39 | 146 |
MS.gene068902.t1 | MTR_4g124740 | 31.613 | 310 | 178 | 10 | 215 | 514 | 54 | 339 | 7.11e-39 | 145 |
MS.gene068902.t1 | MTR_5g088300 | 31.833 | 311 | 184 | 7 | 208 | 514 | 30 | 316 | 8.31e-39 | 144 |
MS.gene068902.t1 | MTR_5g088280 | 31.935 | 310 | 185 | 7 | 208 | 514 | 32 | 318 | 1.20e-35 | 136 |
MS.gene068902.t1 | MTR_2g436600 | 30.864 | 324 | 188 | 10 | 201 | 515 | 41 | 337 | 1.33e-35 | 136 |
MS.gene068902.t1 | MTR_2g073390 | 30.745 | 322 | 196 | 9 | 202 | 514 | 58 | 361 | 2.94e-35 | 135 |
MS.gene068902.t1 | MTR_4g074290 | 29.467 | 319 | 204 | 8 | 202 | 514 | 58 | 361 | 1.15e-33 | 131 |
MS.gene068902.t1 | MTR_5g088290 | 30.000 | 310 | 192 | 6 | 208 | 514 | 41 | 328 | 2.48e-32 | 127 |
MS.gene068902.t1 | MTR_4g051810 | 28.990 | 307 | 199 | 5 | 208 | 514 | 30 | 317 | 4.27e-31 | 123 |
MS.gene068902.t1 | MTR_0009s0350 | 30.249 | 281 | 178 | 6 | 202 | 476 | 58 | 326 | 6.44e-31 | 124 |
MS.gene068902.t1 | MTR_0009s0340 | 30.249 | 281 | 178 | 6 | 202 | 476 | 58 | 326 | 6.44e-31 | 124 |
MS.gene068902.t1 | MTR_6g025590 | 36.649 | 191 | 113 | 4 | 202 | 384 | 36 | 226 | 6.98e-27 | 109 |
MS.gene068902.t1 | MTR_2g436070 | 28.700 | 223 | 124 | 4 | 86 | 286 | 112 | 321 | 8.26e-21 | 94.7 |
MS.gene068902.t1 | MTR_0408s0030 | 38.211 | 123 | 61 | 3 | 368 | 487 | 13 | 123 | 3.72e-20 | 87.8 |
MS.gene068902.t1 | MTR_6g024200 | 32.298 | 161 | 87 | 7 | 355 | 514 | 137 | 276 | 6.37e-13 | 69.7 |
MS.gene068902.t1 | MTR_0633s0010 | 49.275 | 69 | 31 | 3 | 229 | 295 | 1 | 67 | 6.68e-12 | 61.2 |
MS.gene068902.t1 | MTR_1g492770 | 48.571 | 70 | 32 | 3 | 229 | 296 | 1 | 68 | 1.44e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068902.t1 | AT4G33220 | 63.740 | 524 | 160 | 5 | 25 | 525 | 7 | 523 | 0.0 | 709 |
MS.gene068902.t1 | AT3G43270 | 62.403 | 516 | 177 | 4 | 26 | 525 | 11 | 525 | 0.0 | 681 |
MS.gene068902.t1 | AT4G33220 | 66.667 | 402 | 112 | 1 | 146 | 525 | 1 | 402 | 0.0 | 585 |
MS.gene068902.t1 | AT5G53370 | 49.890 | 455 | 206 | 8 | 88 | 525 | 136 | 585 | 1.52e-152 | 449 |
MS.gene068902.t1 | AT5G53370 | 49.890 | 455 | 206 | 8 | 88 | 525 | 172 | 621 | 3.95e-152 | 449 |
MS.gene068902.t1 | AT3G05620 | 48.352 | 455 | 209 | 6 | 87 | 526 | 99 | 542 | 1.94e-149 | 439 |
MS.gene068902.t1 | AT1G11580 | 50.569 | 439 | 197 | 6 | 94 | 521 | 124 | 553 | 6.63e-144 | 426 |
MS.gene068902.t1 | AT3G49220 | 42.152 | 567 | 275 | 11 | 5 | 527 | 41 | 598 | 6.86e-144 | 427 |
MS.gene068902.t1 | AT1G11580 | 50.569 | 439 | 197 | 6 | 94 | 521 | 145 | 574 | 1.28e-143 | 426 |
MS.gene068902.t1 | AT3G49220 | 42.152 | 567 | 275 | 11 | 5 | 527 | 86 | 643 | 2.20e-143 | 427 |
MS.gene068902.t1 | AT1G53830 | 47.527 | 465 | 215 | 6 | 88 | 525 | 125 | 587 | 8.01e-139 | 414 |
MS.gene068902.t1 | AT2G45220 | 45.618 | 502 | 240 | 14 | 35 | 525 | 32 | 511 | 1.74e-136 | 405 |
MS.gene068902.t1 | AT3G14310 | 46.398 | 472 | 218 | 5 | 88 | 525 | 122 | 592 | 2.66e-136 | 407 |
MS.gene068902.t1 | AT4G02320 | 44.956 | 456 | 215 | 7 | 92 | 525 | 77 | 518 | 2.97e-134 | 399 |
MS.gene068902.t1 | AT2G26440 | 42.471 | 518 | 268 | 10 | 32 | 525 | 36 | 547 | 2.79e-133 | 398 |
MS.gene068902.t1 | AT1G23200 | 43.478 | 506 | 223 | 8 | 59 | 525 | 73 | 554 | 3.61e-132 | 395 |
MS.gene068902.t1 | AT4G02330 | 44.561 | 478 | 219 | 10 | 92 | 525 | 96 | 571 | 1.94e-131 | 394 |
MS.gene068902.t1 | AT4G02300 | 43.237 | 451 | 228 | 6 | 92 | 525 | 93 | 532 | 5.34e-130 | 389 |
MS.gene068902.t1 | AT3G05610 | 41.498 | 494 | 259 | 8 | 48 | 525 | 86 | 565 | 2.28e-128 | 389 |
MS.gene068902.t1 | AT3G10720 | 44.186 | 473 | 219 | 10 | 92 | 525 | 149 | 615 | 1.84e-127 | 385 |
MS.gene068902.t1 | AT2G26450 | 46.875 | 416 | 203 | 6 | 122 | 525 | 202 | 611 | 2.34e-127 | 385 |
MS.gene068902.t1 | AT5G51490 | 45.175 | 456 | 231 | 7 | 81 | 525 | 89 | 536 | 3.02e-127 | 382 |
MS.gene068902.t1 | AT1G02810 | 58.095 | 315 | 126 | 4 | 215 | 525 | 265 | 577 | 3.14e-127 | 384 |
MS.gene068902.t1 | AT3G60730 | 45.154 | 423 | 205 | 5 | 130 | 525 | 97 | 519 | 6.12e-126 | 378 |
MS.gene068902.t1 | AT5G27870 | 40.447 | 492 | 265 | 8 | 48 | 525 | 85 | 562 | 7.28e-126 | 385 |
MS.gene068902.t1 | AT5G04970 | 42.339 | 496 | 243 | 9 | 69 | 525 | 129 | 620 | 1.17e-125 | 381 |
MS.gene068902.t1 | AT3G59010 | 45.916 | 453 | 203 | 9 | 91 | 525 | 100 | 528 | 1.05e-123 | 373 |
MS.gene068902.t1 | AT5G51500 | 45.312 | 448 | 232 | 7 | 86 | 525 | 98 | 540 | 1.39e-123 | 373 |
MS.gene068902.t1 | AT2G43050 | 43.919 | 444 | 217 | 7 | 91 | 525 | 96 | 516 | 2.46e-123 | 372 |
MS.gene068902.t1 | AT5G49180 | 46.247 | 413 | 200 | 7 | 129 | 521 | 156 | 566 | 7.29e-122 | 370 |
MS.gene068902.t1 | AT1G53840 | 40.611 | 458 | 240 | 6 | 86 | 519 | 132 | 581 | 6.91e-121 | 367 |
MS.gene068902.t1 | AT3G10710 | 42.241 | 464 | 249 | 9 | 69 | 525 | 110 | 561 | 9.94e-121 | 366 |
MS.gene068902.t1 | AT2G47550 | 43.975 | 473 | 213 | 10 | 92 | 525 | 99 | 558 | 3.71e-120 | 365 |
MS.gene068902.t1 | AT3G47400 | 43.736 | 455 | 241 | 7 | 84 | 525 | 142 | 594 | 9.40e-120 | 365 |
MS.gene068902.t1 | AT5G04960 | 39.689 | 514 | 272 | 9 | 31 | 523 | 66 | 562 | 2.27e-119 | 363 |
MS.gene068902.t1 | AT4G33230 | 40.779 | 488 | 259 | 10 | 56 | 525 | 131 | 606 | 6.57e-118 | 360 |
MS.gene068902.t1 | AT3G14300 | 42.794 | 451 | 227 | 8 | 86 | 515 | 519 | 959 | 4.21e-114 | 360 |
MS.gene068902.t1 | AT4G00190 | 40.041 | 492 | 255 | 10 | 36 | 525 | 21 | 474 | 9.28e-113 | 343 |
MS.gene068902.t1 | AT3G10720 | 58.462 | 260 | 107 | 1 | 266 | 525 | 1 | 259 | 1.56e-112 | 335 |
MS.gene068902.t1 | AT4G03930 | 43.921 | 403 | 214 | 5 | 130 | 525 | 127 | 524 | 4.97e-109 | 335 |
MS.gene068902.t1 | AT3G06830 | 41.805 | 421 | 213 | 8 | 130 | 523 | 151 | 566 | 4.83e-108 | 334 |
MS.gene068902.t1 | AT3G27980 | 44.332 | 397 | 211 | 4 | 133 | 525 | 107 | 497 | 6.02e-108 | 331 |
MS.gene068902.t1 | AT1G11590 | 44.665 | 403 | 211 | 5 | 130 | 525 | 127 | 524 | 9.35e-108 | 332 |
MS.gene068902.t1 | AT5G20860 | 42.152 | 446 | 236 | 10 | 90 | 525 | 105 | 538 | 1.86e-107 | 331 |
MS.gene068902.t1 | AT4G15980 | 45.531 | 358 | 185 | 5 | 175 | 523 | 344 | 700 | 1.37e-103 | 326 |
MS.gene068902.t1 | AT4G15980 | 45.531 | 358 | 185 | 5 | 175 | 523 | 354 | 710 | 3.28e-103 | 325 |
MS.gene068902.t1 | AT5G09760 | 44.375 | 320 | 153 | 7 | 210 | 513 | 236 | 546 | 1.12e-87 | 280 |
MS.gene068902.t1 | AT5G09760 | 44.237 | 321 | 154 | 7 | 209 | 513 | 261 | 572 | 2.63e-87 | 280 |
MS.gene068902.t1 | AT1G11370 | 51.406 | 249 | 121 | 0 | 207 | 455 | 38 | 286 | 3.58e-87 | 270 |
MS.gene068902.t1 | AT5G64640 | 35.135 | 481 | 234 | 14 | 85 | 518 | 153 | 602 | 8.98e-85 | 274 |
MS.gene068902.t1 | AT5G20860 | 38.283 | 431 | 216 | 9 | 90 | 510 | 105 | 495 | 2.65e-84 | 270 |
MS.gene068902.t1 | AT2G47030 | 41.210 | 347 | 187 | 4 | 194 | 525 | 244 | 588 | 6.50e-81 | 264 |
MS.gene068902.t1 | AT2G47040 | 42.151 | 344 | 185 | 4 | 194 | 525 | 254 | 595 | 3.11e-80 | 262 |
MS.gene068902.t1 | AT3G62170 | 39.155 | 355 | 191 | 4 | 194 | 525 | 236 | 588 | 1.66e-76 | 252 |
MS.gene068902.t1 | AT1G05310 | 36.129 | 310 | 176 | 5 | 215 | 514 | 91 | 388 | 2.91e-56 | 193 |
MS.gene068902.t1 | AT2G36710 | 34.936 | 312 | 184 | 5 | 215 | 519 | 91 | 390 | 7.68e-54 | 187 |
MS.gene068902.t1 | AT5G19730 | 34.653 | 303 | 172 | 7 | 223 | 514 | 94 | 381 | 2.59e-50 | 177 |
MS.gene068902.t1 | AT3G29090 | 33.115 | 305 | 180 | 5 | 215 | 509 | 7 | 297 | 4.99e-49 | 172 |
MS.gene068902.t1 | AT2G36700 | 33.837 | 331 | 199 | 6 | 189 | 514 | 18 | 333 | 1.01e-48 | 171 |
MS.gene068902.t1 | AT3G17060 | 31.402 | 328 | 196 | 7 | 199 | 516 | 30 | 338 | 1.22e-47 | 169 |
MS.gene068902.t1 | AT2G21610 | 33.775 | 302 | 178 | 7 | 215 | 514 | 51 | 332 | 3.69e-46 | 165 |
MS.gene068902.t1 | AT1G44980 | 44.560 | 193 | 103 | 1 | 195 | 383 | 54 | 246 | 4.45e-46 | 162 |
MS.gene068902.t1 | AT2G21610 | 33.775 | 302 | 178 | 7 | 215 | 514 | 56 | 337 | 5.22e-46 | 165 |
MS.gene068902.t1 | AT3G24130 | 34.859 | 284 | 161 | 5 | 215 | 487 | 34 | 304 | 1.41e-44 | 160 |
MS.gene068902.t1 | AT5G18990 | 34.386 | 285 | 163 | 5 | 214 | 487 | 28 | 299 | 1.21e-42 | 155 |
MS.gene068902.t1 | AT5G55590 | 32.653 | 343 | 200 | 7 | 184 | 514 | 55 | 378 | 1.65e-41 | 153 |
MS.gene068902.t1 | AT5G07430 | 29.973 | 367 | 220 | 10 | 168 | 514 | 6 | 355 | 3.86e-41 | 152 |
MS.gene068902.t1 | AT5G55590 | 35.192 | 287 | 158 | 8 | 184 | 458 | 55 | 325 | 8.32e-41 | 150 |
MS.gene068902.t1 | AT5G47500 | 30.247 | 324 | 198 | 7 | 203 | 514 | 50 | 357 | 4.73e-40 | 149 |
MS.gene068902.t1 | AT5G61680 | 30.508 | 354 | 203 | 11 | 183 | 514 | 26 | 358 | 2.65e-39 | 147 |
MS.gene068902.t1 | AT5G26810 | 30.031 | 323 | 194 | 7 | 208 | 514 | 27 | 333 | 5.18e-38 | 142 |
MS.gene068902.t1 | AT5G07420 | 30.094 | 319 | 200 | 7 | 202 | 514 | 54 | 355 | 3.59e-37 | 141 |
MS.gene068902.t1 | AT1G69940 | 27.151 | 372 | 232 | 9 | 162 | 514 | 4 | 355 | 5.16e-37 | 140 |
MS.gene068902.t1 | AT2G19150 | 31.962 | 316 | 189 | 7 | 215 | 521 | 41 | 339 | 7.56e-37 | 139 |
MS.gene068902.t1 | AT5G07410 | 27.151 | 372 | 232 | 9 | 162 | 514 | 4 | 355 | 2.67e-36 | 139 |
MS.gene068902.t1 | AT2G47280 | 31.132 | 318 | 190 | 8 | 208 | 514 | 28 | 327 | 1.54e-35 | 136 |
MS.gene068902.t1 | AT2G19150 | 33.202 | 253 | 146 | 6 | 215 | 458 | 41 | 279 | 9.32e-32 | 124 |
MS.gene068902.t1 | AT3G49220 | 29.836 | 305 | 170 | 10 | 27 | 295 | 115 | 411 | 6.64e-31 | 125 |
Find 109 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCTGGTATTATTACCTTTA+GGG | 0.175810 | 2.1:-46051193 | None:intergenic |
ATGTCCATTCTTTCTCAATT+TGG | 0.219429 | 2.1:+46051062 | MS.gene068902:CDS |
TATGCTGAGTACATGAATTA+TGG | 0.225681 | 2.1:+46056260 | MS.gene068902:CDS |
CAATTTGGTGGTGCTGGATT+TGG | 0.235870 | 2.1:+46051077 | MS.gene068902:CDS |
CTTTCTCAATTTGGTGGTGC+TGG | 0.290029 | 2.1:+46051071 | MS.gene068902:CDS |
CTGCGAGCATTGACATCATT+TGG | 0.297738 | 2.1:-46052566 | None:intergenic |
CAGCGGTAATGTTGCAGAAT+TGG | 0.316942 | 2.1:-46056076 | None:intergenic |
GAGAAACCAGTTGGTTCATT+AGG | 0.318133 | 2.1:-46056050 | None:intergenic |
AATTTATTGAGGGGAATCTA+TGG | 0.320153 | 2.1:+46056372 | MS.gene068902:CDS |
GATTGAATAAACGAGTTAAA+TGG | 0.323496 | 2.1:+46056294 | MS.gene068902:CDS |
TGTGTGAAGCTATCCAAGTT+AGG | 0.327477 | 2.1:-46052609 | None:intergenic |
TCGACGGTTGGACCACGTTT+AGG | 0.337097 | 2.1:+46052922 | MS.gene068902:CDS |
AATTCCACTTATACATATCT+TGG | 0.358083 | 2.1:+46056122 | MS.gene068902:CDS |
AACTGAATTTGAGTTTCTTA+AGG | 0.368379 | 2.1:+46050980 | MS.gene068902:CDS |
AAAAGGTCGATTTCCTTCTT+GGG | 0.371455 | 2.1:+46052641 | MS.gene068902:CDS |
TTCCACTCTAGCCACCCTTC+TGG | 0.377303 | 2.1:-46056209 | None:intergenic |
ACGTTTAGGTCAGCTACTTT+TGG | 0.380415 | 2.1:+46052936 | MS.gene068902:CDS |
AGAAACCAGTTGGTTCATTA+GGG | 0.382263 | 2.1:-46056049 | None:intergenic |
GTAGCATTCACTGCTGGATT+AGG | 0.383549 | 2.1:+46056410 | MS.gene068902:CDS |
ATGCTGAGTACATGAATTAT+GGG | 0.385657 | 2.1:+46056261 | MS.gene068902:CDS |
AGAAAACTCTTGCAAGCAAA+TGG | 0.389703 | 2.1:+46052678 | MS.gene068902:CDS |
CATGTTATGATAGTGGGTAT+TGG | 0.409412 | 2.1:-46050891 | None:intergenic |
TGATTCAGACCTTCTTCCTT+CGG | 0.412325 | 2.1:+46056097 | MS.gene068902:CDS |
TCCATTCTTTCTCAATTTGG+TGG | 0.412634 | 2.1:+46051065 | MS.gene068902:CDS |
AATCCATCCATGCATGTCTC+TGG | 0.419659 | 2.1:-46052495 | None:intergenic |
AAATTCAGTTGCTGCTTTAG+TGG | 0.420241 | 2.1:-46050967 | None:intergenic |
TTGCTCCATCTGAATTTGTT+GGG | 0.422448 | 2.1:+46051003 | MS.gene068902:CDS |
AATCTATGGTTGCCCACAAC+AGG | 0.423059 | 2.1:+46056386 | MS.gene068902:CDS |
TATCGTTTCATGCTATAATC+AGG | 0.429853 | 2.1:-46052777 | None:intergenic |
GTTCTTGAATATTGCTTCCA+TGG | 0.429955 | 2.1:-46056149 | None:intergenic |
ATGAATTATGGGTCTGGAGC+TGG | 0.430214 | 2.1:+46056272 | MS.gene068902:CDS |
TGTGTGTGTGCAGCTGTTAG+TGG | 0.432880 | 2.1:+46055729 | MS.gene068902:intron |
GTGTGAAGCTATCCAAGTTA+GGG | 0.439862 | 2.1:-46052608 | None:intergenic |
GCCACTGCTTGGTGCTTCTC+CGG | 0.441333 | 2.1:-46055798 | None:intergenic |
TACAGTGACACAATTTATTG+AGG | 0.451745 | 2.1:+46056361 | MS.gene068902:CDS |
GTTGCTCCATCTGAATTTGT+TGG | 0.452464 | 2.1:+46051002 | MS.gene068902:CDS |
TTTCCTCTGATGCACTGACT+TGG | 0.456892 | 2.1:+46051150 | MS.gene068902:CDS |
GAAAACTCTTGCAAGCAAAT+GGG | 0.459250 | 2.1:+46052679 | MS.gene068902:CDS |
GAATGTGCATGTTATGATAG+TGG | 0.463870 | 2.1:-46050898 | None:intergenic |
GTAGGTAAGCATAATAGTAC+TGG | 0.474157 | 2.1:+46052423 | MS.gene068902:intron |
AATTCAGTTGCTGCTTTAGT+GGG | 0.485440 | 2.1:-46050966 | None:intergenic |
GAGAGTCAATTAGTGTCTAC+TGG | 0.485673 | 2.1:+46052537 | MS.gene068902:CDS |
CACACAAGTAGACCCTAACT+TGG | 0.487798 | 2.1:+46052596 | MS.gene068902:CDS |
TGTGCAGCTGTTAGTGGTAG+AGG | 0.489543 | 2.1:+46055735 | MS.gene068902:intron |
TTCAGAGAATGCAAAATAAG+TGG | 0.490025 | 2.1:+46055912 | MS.gene068902:CDS |
AATAAACGAGTTAAATGGCC+AGG | 0.493857 | 2.1:+46056299 | MS.gene068902:CDS |
TTTGTTGAAGAAAGAGCCAT+TGG | 0.496653 | 2.1:-46050843 | None:intergenic |
TGGAATTAACCGAAGGAAGA+AGG | 0.514420 | 2.1:-46056106 | None:intergenic |
ACATGCATGGATGGATTTGA+AGG | 0.518569 | 2.1:+46052501 | MS.gene068902:CDS |
ACCACCAAATTGAGAAAGAA+TGG | 0.519567 | 2.1:-46051066 | None:intergenic |
GTCGTTGCTACCGATGGGAG+CGG | 0.520579 | 2.1:+46052717 | MS.gene068902:CDS |
GATGTTGTCGTTGCTACCGA+TGG | 0.521551 | 2.1:+46052711 | MS.gene068902:CDS |
AAAGACCCTAATGAACCAAC+TGG | 0.526693 | 2.1:+46056044 | MS.gene068902:CDS |
CGGATCTTAGTGCCACTGCT+TGG | 0.529757 | 2.1:-46055809 | None:intergenic |
GGCCAGAAGGGTGGCTAGAG+TGG | 0.530386 | 2.1:+46056207 | MS.gene068902:CDS |
ACAGTGACACAATTTATTGA+GGG | 0.533042 | 2.1:+46056362 | MS.gene068902:CDS |
GAGTACATGAATTATGGGTC+TGG | 0.534865 | 2.1:+46056266 | MS.gene068902:CDS |
TCTGCTGCTCAAAACCCTAA+AGG | 0.536955 | 2.1:+46051179 | MS.gene068902:CDS |
TCGTTTACCCGTGATAATTG+TGG | 0.543782 | 2.1:-46052892 | None:intergenic |
GCATTGACATCATTTGGCTT+AGG | 0.545040 | 2.1:-46052560 | None:intergenic |
AGACCAAGTCAGTGCATCAG+AGG | 0.552488 | 2.1:-46051153 | None:intergenic |
AATCCAGAGACATGCATGGA+TGG | 0.553107 | 2.1:+46052492 | MS.gene068902:CDS |
ACAGGTGTAGCATTCACTGC+TGG | 0.562002 | 2.1:+46056404 | MS.gene068902:CDS |
GGTAAAATTCCCGCTCCCAT+CGG | 0.563517 | 2.1:-46052727 | None:intergenic |
CAGTGACACAATTTATTGAG+GGG | 0.568743 | 2.1:+46056363 | MS.gene068902:CDS |
TCGTTGCTACCGATGGGAGC+GGG | 0.578585 | 2.1:+46052718 | MS.gene068902:CDS |
ATGTTGTCGTTGCTACCGAT+GGG | 0.579776 | 2.1:+46052712 | MS.gene068902:CDS |
TCTTCCAAGATATGTATAAG+TGG | 0.580708 | 2.1:-46056126 | None:intergenic |
GGAGCACTAGCACATAGTGC+TGG | 0.581300 | 2.1:-46050945 | None:intergenic |
AAATGGAATCTCATGATGGT+CGG | 0.585637 | 2.1:+46052855 | MS.gene068902:CDS |
AACGAAGCTTCATCGACGGT+TGG | 0.590212 | 2.1:+46052910 | MS.gene068902:CDS |
TATGAATGCCACAATTATCA+CGG | 0.591775 | 2.1:+46052884 | MS.gene068902:CDS |
ATGAATGCCACAATTATCAC+GGG | 0.592499 | 2.1:+46052885 | MS.gene068902:CDS |
AAAACTCTTGCAAGCAAATG+GGG | 0.592783 | 2.1:+46052680 | MS.gene068902:CDS |
AATCTCATGATGGTCGGAGA+TGG | 0.595084 | 2.1:+46052861 | MS.gene068902:CDS |
GAAGGGTGGCTAGAGTGGAA+TGG | 0.595880 | 2.1:+46056212 | MS.gene068902:CDS |
AATGTGCATGTTATGATAGT+GGG | 0.596818 | 2.1:-46050897 | None:intergenic |
CTCTCTGTATTCTATCGATG+TGG | 0.596835 | 2.1:+46055840 | MS.gene068902:CDS |
AGTGAATGCTACACCTGTTG+TGG | 0.597942 | 2.1:-46056399 | None:intergenic |
TATGCGTGTAGAGGCTGTCT+TGG | 0.598483 | 2.1:-46055875 | None:intergenic |
AAAGAAATGGAATCTCATGA+TGG | 0.602603 | 2.1:+46052851 | MS.gene068902:CDS |
AATTGGATCGAGAAACCAGT+TGG | 0.605177 | 2.1:-46056059 | None:intergenic |
GGGACAGTGCAAGATGTAGT+TGG | 0.605878 | 2.1:+46051023 | MS.gene068902:CDS |
AAGAACACTATCACAGCTCA+CGG | 0.608273 | 2.1:+46056017 | MS.gene068902:CDS |
TCATTCATTATGTGATACCC+TGG | 0.610003 | 2.1:-46056317 | None:intergenic |
AGTGATGTGTTGAGGCCAGA+AGG | 0.614258 | 2.1:+46056194 | MS.gene068902:CDS |
TCCGGAGAAGCACCAAGCAG+TGG | 0.621249 | 2.1:+46055797 | MS.gene068902:CDS |
GTGAATGCTACACCTGTTGT+GGG | 0.624429 | 2.1:-46056398 | None:intergenic |
TATGTGATATATGTAAAGAG+AGG | 0.625915 | 2.1:+46052798 | MS.gene068902:CDS |
CTCACATAAGTGATGTGTTG+AGG | 0.629032 | 2.1:+46056186 | MS.gene068902:CDS |
TGCAAATCCAGAGACATGCA+TGG | 0.637742 | 2.1:+46052488 | MS.gene068902:CDS |
GATGGATTTGAAGGTACTAG+TGG | 0.639191 | 2.1:+46052510 | MS.gene068902:CDS |
AGGAAGAAGGTCTGAATCAG+CGG | 0.639949 | 2.1:-46056093 | None:intergenic |
ATAAACGAGTTAAATGGCCA+GGG | 0.640087 | 2.1:+46056300 | MS.gene068902:CDS |
GGCGCATTGTATGCGTGTAG+AGG | 0.650700 | 2.1:-46055884 | None:intergenic |
AGAATGCAAAATAAGTGGCA+CGG | 0.652118 | 2.1:+46055917 | MS.gene068902:CDS |
GTGATGTGTTGAGGCCAGAA+GGG | 0.653931 | 2.1:+46056195 | MS.gene068902:CDS |
ATGCACCGCATCCATCACCT+TGG | 0.654708 | 2.1:-46052748 | None:intergenic |
ATACATATCTTGGAAGACCA+TGG | 0.655553 | 2.1:+46056132 | MS.gene068902:CDS |
ACTGTCCCAACAAATTCAGA+TGG | 0.656011 | 2.1:-46051008 | None:intergenic |
GTATAAGTGGAATTAACCGA+AGG | 0.660435 | 2.1:-46056113 | None:intergenic |
GAATACAGAGAGGTCCGAGT+CGG | 0.663579 | 2.1:-46055829 | None:intergenic |
TGAACTCTGATGTGAGAACA+TGG | 0.674307 | 2.1:+46052451 | MS.gene068902:CDS |
AGTGGCACTAAGATCCGACT+CGG | 0.682376 | 2.1:+46055815 | MS.gene068902:CDS |
GGTAAACGAAGCTTCATCGA+CGG | 0.701745 | 2.1:+46052906 | MS.gene068902:CDS |
ATGCAAAATAAGTGGCACGG+TGG | 0.717382 | 2.1:+46055920 | MS.gene068902:CDS |
ATGTGTTGAGGCCAGAAGGG+TGG | 0.717629 | 2.1:+46056198 | MS.gene068902:CDS |
AAAAGTAGCTGACCTAAACG+TGG | 0.746691 | 2.1:-46052934 | None:intergenic |
CACATCGATAGAATACAGAG+AGG | 0.764745 | 2.1:-46055839 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAATAAAAATACTAG+AGG | + | chr2.1:46052129-46052148 | MS.gene068902:intron | 10.0% |
!! | AATAAGATAATAAATGATTA+AGG | + | chr2.1:46055354-46055373 | MS.gene068902:intron | 10.0% |
!! | ATAAGATAATAAATGATTAA+GGG | + | chr2.1:46055355-46055374 | MS.gene068902:intron | 10.0% |
!! | ATACTAAAAAAAAATACTAA+AGG | - | chr2.1:46054646-46054665 | None:intergenic | 10.0% |
!! | TATAAAAAAGTTTAATTCAA+AGG | - | chr2.1:46054538-46054557 | None:intergenic | 10.0% |
!!! | AGTAATTTTTTATTTTTGTA+AGG | + | chr2.1:46054577-46054596 | MS.gene068902:intron | 10.0% |
!!! | ATTAGTTTTTGATATTTTTA+TGG | + | chr2.1:46055028-46055047 | MS.gene068902:intron | 10.0% |
!!! | GATCAAAATTATTATTTTTA+TGG | - | chr2.1:46053840-46053859 | None:intergenic | 10.0% |
!!! | GTAATTTTTTATTTTTGTAA+GGG | + | chr2.1:46054578-46054597 | MS.gene068902:intron | 10.0% |
!!! | TAATTTTTTATTTTTGTAAG+GGG | + | chr2.1:46054579-46054598 | MS.gene068902:intron | 10.0% |
!!! | TTAGTTTTTGATATTTTTAT+GGG | + | chr2.1:46055029-46055048 | MS.gene068902:intron | 10.0% |
!! | AACTGTTATATTATAGTTAT+TGG | - | chr2.1:46052288-46052307 | None:intergenic | 15.0% |
!! | AGTAAAAATTCTTATATTTG+TGG | - | chr2.1:46054975-46054994 | None:intergenic | 15.0% |
!! | ATTCTCTTATGTAAAATTTA+CGG | + | chr2.1:46054234-46054253 | MS.gene068902:intron | 15.0% |
!! | CAATAAAACGATAATTAAAT+AGG | - | chr2.1:46055315-46055334 | None:intergenic | 15.0% |
!! | CAATATCAATATGTTTATAT+TGG | - | chr2.1:46055198-46055217 | None:intergenic | 15.0% |
!! | CACTTAAATTAATGTATATT+TGG | - | chr2.1:46053407-46053426 | None:intergenic | 15.0% |
!! | CTAAAATAATGACAATTAAA+GGG | - | chr2.1:46051938-46051957 | None:intergenic | 15.0% |
!! | TTAGTAAAAATATCTTTCTT+AGG | + | chr2.1:46054132-46054151 | MS.gene068902:intron | 15.0% |
!!! | AGAAATAACTATTTTTTTAC+AGG | - | chr2.1:46051518-46051537 | None:intergenic | 15.0% |
!!! | ATTCCATTTAATTTAACAAT+GGG | + | chr2.1:46051419-46051438 | MS.gene068902:intron | 15.0% |
!!! | GAGAAATATTTATTTTTTGA+AGG | - | chr2.1:46053693-46053712 | None:intergenic | 15.0% |
!!! | TAATAATTTTGATCAATTTG+TGG | + | chr2.1:46053846-46053865 | MS.gene068902:intron | 15.0% |
!!! | TATTCCATTTAATTTAACAA+TGG | + | chr2.1:46051418-46051437 | MS.gene068902:intron | 15.0% |
!!! | TCTAAAATAATGACAATTAA+AGG | - | chr2.1:46051939-46051958 | None:intergenic | 15.0% |
!!! | TTAAGAAAAGTTGTTTTTTT+TGG | + | chr2.1:46053253-46053272 | MS.gene068902:intron | 15.0% |
!!! | TTGAAGTTTACATATTTTAA+AGG | - | chr2.1:46054378-46054397 | None:intergenic | 15.0% |
!!! | TTTGGTAGAAATTATTTTTT+TGG | + | chr2.1:46053271-46053290 | MS.gene068902:intron | 15.0% |
!!! | TTTTTAGCACAAATTATATA+TGG | + | chr2.1:46053201-46053220 | MS.gene068902:intron | 15.0% |
!! | AAAAAAAGAGATATGAGAAT+GGG | - | chr2.1:46053553-46053572 | None:intergenic | 20.0% |
!! | AAATTAAACTGAAAGTTGAA+AGG | - | chr2.1:46053953-46053972 | None:intergenic | 20.0% |
!! | AATCCCATTGTTAAATTAAA+TGG | - | chr2.1:46051425-46051444 | None:intergenic | 20.0% |
!! | AATGTTAAAAGCAAAAATCT+TGG | - | chr2.1:46054507-46054526 | None:intergenic | 20.0% |
!! | AATTAAACTGAAAGTTGAAA+GGG | - | chr2.1:46053952-46053971 | None:intergenic | 20.0% |
!! | CTAAAAAAATTTAACCTATG+GGG | - | chr2.1:46053188-46053207 | None:intergenic | 20.0% |
!! | GCTAAAAAAATTTAACCTAT+GGG | - | chr2.1:46053189-46053208 | None:intergenic | 20.0% |
!! | GTCAAATACTAGTTAAAAAA+GGG | + | chr2.1:46055982-46056001 | MS.gene068902:CDS | 20.0% |
!! | TAAAAAAAGAGATATGAGAA+TGG | - | chr2.1:46053554-46053573 | None:intergenic | 20.0% |
!! | TAAAAATATCTTTCTTAGGA+TGG | + | chr2.1:46054136-46054155 | MS.gene068902:intron | 20.0% |
!! | TCTAACATGGATAAATAAAA+TGG | + | chr2.1:46051338-46051357 | MS.gene068902:intron | 20.0% |
!! | TGCTAAAAAAATTTAACCTA+TGG | - | chr2.1:46053190-46053209 | None:intergenic | 20.0% |
!! | TGTCAAATACTAGTTAAAAA+AGG | + | chr2.1:46055981-46056000 | MS.gene068902:CDS | 20.0% |
!! | TTGAAATCAAGAAAAAGAAA+TGG | + | chr2.1:46052838-46052857 | MS.gene068902:CDS | 20.0% |
!! | TTTACATAAGAGAATAACTA+CGG | - | chr2.1:46054229-46054248 | None:intergenic | 20.0% |
!!! | ACAATTACTTCATTTTATCA+TGG | + | chr2.1:46053227-46053246 | MS.gene068902:intron | 20.0% |
!!! | ACATAGCTTTTATATAAACA+TGG | - | chr2.1:46055572-46055591 | None:intergenic | 20.0% |
!!! | AGATTTTTGCTTTTAACATT+AGG | + | chr2.1:46054507-46054526 | MS.gene068902:intron | 20.0% |
!!! | TAATATGGACTTTAAAAAGT+GGG | + | chr2.1:46055059-46055078 | MS.gene068902:intron | 20.0% |
!!! | TAATTAATTTGTTACCACTT+TGG | + | chr2.1:46051297-46051316 | MS.gene068902:intron | 20.0% |
!!! | TGTAATTTTCTTACCAATTA+AGG | - | chr2.1:46054310-46054329 | None:intergenic | 20.0% |
!!! | TTTAGGTCATTTTTAAAGAA+TGG | + | chr2.1:46052358-46052377 | MS.gene068902:intron | 20.0% |
!!! | TTTTATTCACTTTTCTTGTT+TGG | + | chr2.1:46054934-46054953 | MS.gene068902:intron | 20.0% |
!!! | TTTTTAAAGTCCATATTAGA+TGG | - | chr2.1:46055057-46055076 | None:intergenic | 20.0% |
! | AAAAAGAGAAACAAAAAGTC+AGG | + | chr2.1:46052242-46052261 | MS.gene068902:intron | 25.0% |
! | AAAAGAGAAACAAAAAGTCA+GGG | + | chr2.1:46052243-46052262 | MS.gene068902:intron | 25.0% |
! | AATTCCACTTATACATATCT+TGG | + | chr2.1:46056122-46056141 | MS.gene068902:CDS | 25.0% |
! | ACTTCAACTACTAAATTACT+TGG | + | chr2.1:46054391-46054410 | MS.gene068902:intron | 25.0% |
! | AGAAAATTACATAATACGTG+TGG | + | chr2.1:46054319-46054338 | MS.gene068902:intron | 25.0% |
! | AGATAAGTGGTGAATAATTT+GGG | - | chr2.1:46051906-46051925 | None:intergenic | 25.0% |
! | AGATAATATTAGGTGTGTAT+GGG | + | chr2.1:46053461-46053480 | MS.gene068902:intron | 25.0% |
! | ATTAGAGGAAGAACATAAAT+AGG | - | chr2.1:46055256-46055275 | None:intergenic | 25.0% |
! | CTATTGTGAATTGAAGAAAA+AGG | - | chr2.1:46052990-46053009 | None:intergenic | 25.0% |
! | CTCATGTTTACATGTTTATT+TGG | + | chr2.1:46054810-46054829 | MS.gene068902:intron | 25.0% |
! | GATTGAATAAACGAGTTAAA+TGG | + | chr2.1:46056294-46056313 | MS.gene068902:CDS | 25.0% |
! | TAAAAAGAATCACGTTTGAT+GGG | - | chr2.1:46055097-46055116 | None:intergenic | 25.0% |
! | TAGATAAGTGGTGAATAATT+TGG | - | chr2.1:46051907-46051926 | None:intergenic | 25.0% |
! | TAGTGAAAACTGAATTGTTA+AGG | - | chr2.1:46055657-46055676 | None:intergenic | 25.0% |
! | TATAGAAAAAAGACAGATGT+TGG | + | chr2.1:46055381-46055400 | MS.gene068902:intron | 25.0% |
! | TATGTGATATATGTAAAGAG+AGG | + | chr2.1:46052798-46052817 | MS.gene068902:CDS | 25.0% |
! | TTCACACAAAAAGAACAAAA+AGG | + | chr2.1:46052624-46052643 | MS.gene068902:CDS | 25.0% |
! | TTTGTGTGTTTCATATAGAT+AGG | - | chr2.1:46053037-46053056 | None:intergenic | 25.0% |
!! | AAAAGATATAAGCTTTTGCA+TGG | - | chr2.1:46051371-46051390 | None:intergenic | 25.0% |
!! | AACTGAATTTGAGTTTCTTA+AGG | + | chr2.1:46050980-46050999 | MS.gene068902:CDS | 25.0% |
!! | ACATGTAAACATGAGAATTT+TGG | - | chr2.1:46054805-46054824 | None:intergenic | 25.0% |
!! | CTAATATGGACTTTAAAAAG+TGG | + | chr2.1:46055058-46055077 | MS.gene068902:intron | 25.0% |
!! | CTTTTTCTTCAATTCACAAT+AGG | + | chr2.1:46052988-46053007 | MS.gene068902:intron | 25.0% |
!! | TTTATATTGATAGCACAACA+AGG | + | chr2.1:46055427-46055446 | MS.gene068902:intron | 25.0% |
!!! | AATTTTGATCAATTTGTGGT+TGG | + | chr2.1:46053850-46053869 | MS.gene068902:intron | 25.0% |
!!! | ATATTTTAAAGGTGAAGAAG+TGG | - | chr2.1:46054367-46054386 | None:intergenic | 25.0% |
!!! | ATTTTGATCAATTTGTGGTT+GGG | + | chr2.1:46053851-46053870 | MS.gene068902:intron | 25.0% |
!!! | TGTGAAACATATTTTTGTGA+GGG | + | chr2.1:46053063-46053082 | MS.gene068902:intron | 25.0% |
!!! | TTCTTTGTTTTGCGAAATTT+AGG | + | chr2.1:46051534-46051553 | MS.gene068902:intron | 25.0% |
!!! | TTGTGAAACATATTTTTGTG+AGG | + | chr2.1:46053062-46053081 | MS.gene068902:intron | 25.0% |
!!! | TTTTTTTTGGCTCTAATTGT+AGG | + | chr2.1:46052405-46052424 | MS.gene068902:intron | 25.0% |
AAAGAAATGGAATCTCATGA+TGG | + | chr2.1:46052851-46052870 | MS.gene068902:CDS | 30.0% | |
AATGTGCATGTTATGATAGT+GGG | - | chr2.1:46050900-46050919 | None:intergenic | 30.0% | |
AATTTATTGAGGGGAATCTA+TGG | + | chr2.1:46056372-46056391 | MS.gene068902:CDS | 30.0% | |
ACAAATATTCATGTTCGACT+GGG | + | chr2.1:46053513-46053532 | MS.gene068902:intron | 30.0% | |
ACACAACACAAAGATTAGTA+AGG | - | chr2.1:46055708-46055727 | None:intergenic | 30.0% | |
ACACATGAATAGAAAGTAAG+CGG | - | chr2.1:46051233-46051252 | None:intergenic | 30.0% | |
ACAGTGACACAATTTATTGA+GGG | + | chr2.1:46056362-46056381 | MS.gene068902:CDS | 30.0% | |
AGACAAGGATTATGTTATGT+TGG | - | chr2.1:46054682-46054701 | None:intergenic | 30.0% | |
AGGGAATCAAAATAGATAAG+TGG | - | chr2.1:46051919-46051938 | None:intergenic | 30.0% | |
ATAGTTATCATGCTTGAGAT+TGG | - | chr2.1:46051571-46051590 | None:intergenic | 30.0% | |
ATATATTTCAGCTGTTGATG+AGG | - | chr2.1:46054780-46054799 | None:intergenic | 30.0% | |
ATGCTGAGTACATGAATTAT+GGG | + | chr2.1:46056261-46056280 | MS.gene068902:CDS | 30.0% | |
ATGTCCATTCTTTCTCAATT+TGG | + | chr2.1:46051062-46051081 | MS.gene068902:CDS | 30.0% | |
CAGATAATATTAGGTGTGTA+TGG | + | chr2.1:46053460-46053479 | MS.gene068902:intron | 30.0% | |
CATACACACCTAATATTATC+TGG | - | chr2.1:46053462-46053481 | None:intergenic | 30.0% | |
CCAAAAATTAAATGAGCATG+TGG | + | chr2.1:46054717-46054736 | MS.gene068902:intron | 30.0% | |
CTAAAAAGAATCACGTTTGA+TGG | - | chr2.1:46055098-46055117 | None:intergenic | 30.0% | |
CTTATGTAAAATTTACGGAG+CGG | + | chr2.1:46054239-46054258 | MS.gene068902:intron | 30.0% | |
GATACGACTAATTTATCCAA+AGG | - | chr2.1:46051397-46051416 | None:intergenic | 30.0% | |
TACAGTGACACAATTTATTG+AGG | + | chr2.1:46056361-46056380 | MS.gene068902:CDS | 30.0% | |
TATCGTTTCATGCTATAATC+AGG | - | chr2.1:46052780-46052799 | None:intergenic | 30.0% | |
TATGAATGCCACAATTATCA+CGG | + | chr2.1:46052884-46052903 | MS.gene068902:CDS | 30.0% | |
TATGCTGAGTACATGAATTA+TGG | + | chr2.1:46056260-46056279 | MS.gene068902:CDS | 30.0% | |
TCTTCCAAGATATGTATAAG+TGG | - | chr2.1:46056129-46056148 | None:intergenic | 30.0% | |
TGAAGTTTCAATTCGACTTT+AGG | + | chr2.1:46052341-46052360 | MS.gene068902:intron | 30.0% | |
TGGGATTTACTGATCTAATA+TGG | + | chr2.1:46051438-46051457 | MS.gene068902:intron | 30.0% | |
TTACATTTACCTAAGTGATG+TGG | + | chr2.1:46051607-46051626 | MS.gene068902:intron | 30.0% | |
TTCAGAGAATGCAAAATAAG+TGG | + | chr2.1:46055912-46055931 | MS.gene068902:CDS | 30.0% | |
TTCTCATTAGCTATGAAACT+TGG | + | chr2.1:46055540-46055559 | MS.gene068902:intron | 30.0% | |
TTGATGAGCCAGATAATATT+AGG | + | chr2.1:46053451-46053470 | MS.gene068902:intron | 30.0% | |
TTGTGTGAGTTTACCTTAAT+TGG | + | chr2.1:46054294-46054313 | MS.gene068902:intron | 30.0% | |
TTTATGGGTTCCATCTAATA+TGG | + | chr2.1:46055044-46055063 | MS.gene068902:intron | 30.0% | |
! | ACTTTAAAAAGTGGGTCAAA+AGG | + | chr2.1:46055067-46055086 | MS.gene068902:intron | 30.0% |
! | TTCTATCGATGTGGAATTTT+TGG | + | chr2.1:46055849-46055868 | MS.gene068902:CDS | 30.0% |
!! | AATCAAGGTTTTGTCTAACA+TGG | + | chr2.1:46051325-46051344 | MS.gene068902:intron | 30.0% |
!! | CCACATGCTCATTTAATTTT+TGG | - | chr2.1:46054720-46054739 | None:intergenic | 30.0% |
!! | CTTTTCTTTTTTCGCTAAGT+TGG | + | chr2.1:46051801-46051820 | MS.gene068902:intron | 30.0% |
!! | GTGATAGTGTTCTTTTGATT+TGG | - | chr2.1:46056011-46056030 | None:intergenic | 30.0% |
!! | TTTTGCATTCTCTGAAGAAT+TGG | - | chr2.1:46055908-46055927 | None:intergenic | 30.0% |
!!! | TTAGCCATTTTTATTACGAC+CGG | + | chr2.1:46051757-46051776 | MS.gene068902:intron | 30.0% |
AAAACTCTTGCAAGCAAATG+GGG | + | chr2.1:46052680-46052699 | MS.gene068902:CDS | 35.0% | |
AAAAGCAGAGTTCTATGTAG+AGG | - | chr2.1:46051786-46051805 | None:intergenic | 35.0% | |
AAAGAGATATGAGAATGGGA+AGG | - | chr2.1:46053549-46053568 | None:intergenic | 35.0% | |
AAATGGAATCTCATGATGGT+CGG | + | chr2.1:46052855-46052874 | MS.gene068902:CDS | 35.0% | |
AAGAGATATGAGAATGGGAA+GGG | - | chr2.1:46053548-46053567 | None:intergenic | 35.0% | |
AATAAACGAGTTAAATGGCC+AGG | + | chr2.1:46056299-46056318 | MS.gene068902:CDS | 35.0% | |
ACCACCAAATTGAGAAAGAA+TGG | - | chr2.1:46051069-46051088 | None:intergenic | 35.0% | |
ACCTTGATTATAAGCCAAAG+TGG | - | chr2.1:46051314-46051333 | None:intergenic | 35.0% | |
ACGACTAATTTATCCAAAGG+TGG | - | chr2.1:46051394-46051413 | None:intergenic | 35.0% | |
ACTTATCCAGCAAATGCAAT+AGG | + | chr2.1:46054619-46054638 | MS.gene068902:intron | 35.0% | |
AGAAAACTCTTGCAAGCAAA+TGG | + | chr2.1:46052678-46052697 | MS.gene068902:CDS | 35.0% | |
AGAATGCAAAATAAGTGGCA+CGG | + | chr2.1:46055917-46055936 | MS.gene068902:CDS | 35.0% | |
ATAAACGAGTTAAATGGCCA+GGG | + | chr2.1:46056300-46056319 | MS.gene068902:CDS | 35.0% | |
ATACATATCTTGGAAGACCA+TGG | + | chr2.1:46056132-46056151 | MS.gene068902:CDS | 35.0% | |
ATGAATGCCACAATTATCAC+GGG | + | chr2.1:46052885-46052904 | MS.gene068902:CDS | 35.0% | |
CAAATATTCATGTTCGACTG+GGG | + | chr2.1:46053514-46053533 | MS.gene068902:intron | 35.0% | |
CAGTGACACAATTTATTGAG+GGG | + | chr2.1:46056363-46056382 | MS.gene068902:CDS | 35.0% | |
CGACGATTATAAAGGATTAG+AGG | - | chr2.1:46055271-46055290 | None:intergenic | 35.0% | |
CGCTGGTATTATTACCTTTA+GGG | - | chr2.1:46051196-46051215 | None:intergenic | 35.0% | |
CTCAAGCATGATAACTATGT+TGG | + | chr2.1:46051573-46051592 | MS.gene068902:intron | 35.0% | |
GAAAACTCTTGCAAGCAAAT+GGG | + | chr2.1:46052679-46052698 | MS.gene068902:CDS | 35.0% | |
GAATGTGCATGTTATGATAG+TGG | - | chr2.1:46050901-46050920 | None:intergenic | 35.0% | |
GACAAATATTCATGTTCGAC+TGG | + | chr2.1:46053512-46053531 | MS.gene068902:intron | 35.0% | |
GAGACTCGAAATTAGATTCT+AGG | + | chr2.1:46054480-46054499 | MS.gene068902:intron | 35.0% | |
GTAGGTAAGCATAATAGTAC+TGG | + | chr2.1:46052423-46052442 | MS.gene068902:intron | 35.0% | |
GTATAAGTGGAATTAACCGA+AGG | - | chr2.1:46056116-46056135 | None:intergenic | 35.0% | |
GTTCTTGAATATTGCTTCCA+TGG | - | chr2.1:46056152-46056171 | None:intergenic | 35.0% | |
TAATACTTCTGTCCCTATCA+TGG | - | chr2.1:46051657-46051676 | None:intergenic | 35.0% | |
TCATTCATTATGTGATACCC+TGG | - | chr2.1:46056320-46056339 | None:intergenic | 35.0% | |
TCCATTCTTTCTCAATTTGG+TGG | + | chr2.1:46051065-46051084 | MS.gene068902:CDS | 35.0% | |
TCGCTGGTATTATTACCTTT+AGG | - | chr2.1:46051197-46051216 | None:intergenic | 35.0% | |
TGACCCTCGTAAATAATTTG+CGG | - | chr2.1:46053126-46053145 | None:intergenic | 35.0% | |
TGCAAATGCGACGATTATAA+AGG | - | chr2.1:46055279-46055298 | None:intergenic | 35.0% | |
! | AAAAAGGTCGATTTCCTTCT+TGG | + | chr2.1:46052640-46052659 | MS.gene068902:CDS | 35.0% |
! | AAAAGGTCGATTTCCTTCTT+GGG | + | chr2.1:46052641-46052660 | MS.gene068902:CDS | 35.0% |
! | ACCACTTTGGCTTATAATCA+AGG | + | chr2.1:46051310-46051329 | MS.gene068902:intron | 35.0% |
! | AGAAACCAGTTGGTTCATTA+GGG | - | chr2.1:46056052-46056071 | None:intergenic | 35.0% |
! | GCTTATATCTTTTCCACCTT+TGG | + | chr2.1:46051378-46051397 | MS.gene068902:intron | 35.0% |
! | TATGGAAACTAGCTTATGCA+TGG | + | chr2.1:46051456-46051475 | MS.gene068902:intron | 35.0% |
! | TCATCTCTTTTAACCCAAGA+AGG | - | chr2.1:46052657-46052676 | None:intergenic | 35.0% |
! | TTGCTCCATCTGAATTTGTT+GGG | + | chr2.1:46051003-46051022 | MS.gene068902:CDS | 35.0% |
!! | AAATTCAGTTGCTGCTTTAG+TGG | - | chr2.1:46050970-46050989 | None:intergenic | 35.0% |
!! | AACAAGAATGCGTCATTTTG+TGG | - | chr2.1:46053319-46053338 | None:intergenic | 35.0% |
!! | AATTCAGTTGCTGCTTTAGT+GGG | - | chr2.1:46050969-46050988 | None:intergenic | 35.0% |
!! | CATGTTATGATAGTGGGTAT+TGG | - | chr2.1:46050894-46050913 | None:intergenic | 35.0% |
!!! | ACAGTTTTGAAAAAGAGTCG+TGG | - | chr2.1:46055964-46055983 | None:intergenic | 35.0% |
!!! | TAGCCATTTTTATTACGACC+GGG | + | chr2.1:46051758-46051777 | MS.gene068902:intron | 35.0% |
AAAAGTAGCTGACCTAAACG+TGG | - | chr2.1:46052937-46052956 | None:intergenic | 40.0% | |
AAAGACCCTAATGAACCAAC+TGG | + | chr2.1:46056044-46056063 | MS.gene068902:CDS | 40.0% | |
AAAGGTCCTATTGCATTTGC+TGG | - | chr2.1:46054628-46054647 | None:intergenic | 40.0% | |
AAGAACACTATCACAGCTCA+CGG | + | chr2.1:46056017-46056036 | MS.gene068902:CDS | 40.0% | |
AATTGGATCGAGAAACCAGT+TGG | - | chr2.1:46056062-46056081 | None:intergenic | 40.0% | |
ACTGTCCCAACAAATTCAGA+TGG | - | chr2.1:46051011-46051030 | None:intergenic | 40.0% | |
AGCAAAATGGCACGCAAAAA+TGG | + | chr2.1:46053097-46053116 | MS.gene068902:intron | 40.0% | |
ATACACCGTCGTTAACATGT+TGG | + | chr2.1:46053784-46053803 | MS.gene068902:intron | 40.0% | |
ATCCCCTGCTAAATTTGCAA+GGG | + | chr2.1:46053145-46053164 | MS.gene068902:intron | 40.0% | |
CACATCGATAGAATACAGAG+AGG | - | chr2.1:46055842-46055861 | None:intergenic | 40.0% | |
CATTCTGTAAGTTGCAGACA+AGG | - | chr2.1:46054697-46054716 | None:intergenic | 40.0% | |
CTCACATAAGTGATGTGTTG+AGG | + | chr2.1:46056186-46056205 | MS.gene068902:CDS | 40.0% | |
CTCTCTGTATTCTATCGATG+TGG | + | chr2.1:46055840-46055859 | MS.gene068902:CDS | 40.0% | |
GAGAGTCAATTAGTGTCTAC+TGG | + | chr2.1:46052537-46052556 | MS.gene068902:CDS | 40.0% | |
GAGTACATGAATTATGGGTC+TGG | + | chr2.1:46056266-46056285 | MS.gene068902:CDS | 40.0% | |
GATCAATTTGTGGTTGGGTT+GGG | + | chr2.1:46053856-46053875 | MS.gene068902:intron | 40.0% | |
GTGTGAAGCTATCCAAGTTA+GGG | - | chr2.1:46052611-46052630 | None:intergenic | 40.0% | |
GTTGCTCCATCTGAATTTGT+TGG | + | chr2.1:46051002-46051021 | MS.gene068902:CDS | 40.0% | |
TAACCTATGGGGTTTCCAAA+GGG | - | chr2.1:46053177-46053196 | None:intergenic | 40.0% | |
TCGAGTCTCGTTAGTATGTT+TGG | - | chr2.1:46054469-46054488 | None:intergenic | 40.0% | |
TCGCCGCAAATTATTTACGA+GGG | + | chr2.1:46053120-46053139 | MS.gene068902:intron | 40.0% | |
TCGTTTACCCGTGATAATTG+TGG | - | chr2.1:46052895-46052914 | None:intergenic | 40.0% | |
TGAACTCTGATGTGAGAACA+TGG | + | chr2.1:46052451-46052470 | MS.gene068902:CDS | 40.0% | |
TGATCAATTTGTGGTTGGGT+TGG | + | chr2.1:46053855-46053874 | MS.gene068902:intron | 40.0% | |
TGATTCAGACCTTCTTCCTT+CGG | + | chr2.1:46056097-46056116 | MS.gene068902:CDS | 40.0% | |
TGGAATTAACCGAAGGAAGA+AGG | - | chr2.1:46056109-46056128 | None:intergenic | 40.0% | |
TGTGTGAAGCTATCCAAGTT+AGG | - | chr2.1:46052612-46052631 | None:intergenic | 40.0% | |
TGTTTCATAAGACCGCAAGT+GGG | + | chr2.1:46054168-46054187 | MS.gene068902:intron | 40.0% | |
TTAACCTATGGGGTTTCCAA+AGG | - | chr2.1:46053178-46053197 | None:intergenic | 40.0% | |
TTAGGTGTGTATGGGTTTGT+AGG | + | chr2.1:46053469-46053488 | MS.gene068902:intron | 40.0% | |
TTGTTTCATAAGACCGCAAG+TGG | + | chr2.1:46054167-46054186 | MS.gene068902:intron | 40.0% | |
! | ACATGCATGGATGGATTTGA+AGG | + | chr2.1:46052501-46052520 | MS.gene068902:CDS | 40.0% |
! | ATCAATTTGTGGTTGGGTTG+GGG | + | chr2.1:46053857-46053876 | MS.gene068902:intron | 40.0% |
! | GAGAAACCAGTTGGTTCATT+AGG | - | chr2.1:46056053-46056072 | None:intergenic | 40.0% |
! | GCATTGACATCATTTGGCTT+AGG | - | chr2.1:46052563-46052582 | None:intergenic | 40.0% |
! | GTGGAATGGAGATTTTGCAT+TGG | + | chr2.1:46056226-46056245 | MS.gene068902:CDS | 40.0% |
!! | ACGTTTAGGTCAGCTACTTT+TGG | + | chr2.1:46052936-46052955 | MS.gene068902:CDS | 40.0% |
!! | ATCACTTTTCAGAACACTGC+TGG | + | chr2.1:46055774-46055793 | MS.gene068902:CDS | 40.0% |
!! | GATGGATTTGAAGGTACTAG+TGG | + | chr2.1:46052510-46052529 | MS.gene068902:CDS | 40.0% |
!! | GTTAGCTTGTGACCATGATA+GGG | + | chr2.1:46051642-46051661 | MS.gene068902:intron | 40.0% |
!!! | AGCCATTTTTATTACGACCG+GGG | + | chr2.1:46051759-46051778 | MS.gene068902:intron | 40.0% |
!!! | TTTTACCAAGGTGATGGATG+CGG | + | chr2.1:46052743-46052762 | MS.gene068902:CDS | 40.0% |
AACCTATGGGGTTTCCAAAG+GGG | - | chr2.1:46053176-46053195 | None:intergenic | 45.0% | |
AATCCAGAGACATGCATGGA+TGG | + | chr2.1:46052492-46052511 | MS.gene068902:CDS | 45.0% | |
AATCCATCCATGCATGTCTC+TGG | - | chr2.1:46052498-46052517 | None:intergenic | 45.0% | |
AATCTATGGTTGCCCACAAC+AGG | + | chr2.1:46056386-46056405 | MS.gene068902:CDS | 45.0% | |
AATCTCATGATGGTCGGAGA+TGG | + | chr2.1:46052861-46052880 | MS.gene068902:CDS | 45.0% | |
ACTCACACACCACATCACTT+AGG | - | chr2.1:46051619-46051638 | None:intergenic | 45.0% | |
ACTCCCCTTGCAAATTTAGC+AGG | - | chr2.1:46053152-46053171 | None:intergenic | 45.0% | |
AGGAAGAAGGTCTGAATCAG+CGG | - | chr2.1:46056096-46056115 | None:intergenic | 45.0% | |
AGTGAATGCTACACCTGTTG+TGG | - | chr2.1:46056402-46056421 | None:intergenic | 45.0% | |
ATGCAAAATAAGTGGCACGG+TGG | + | chr2.1:46055920-46055939 | MS.gene068902:CDS | 45.0% | |
ATGTTGTCGTTGCTACCGAT+GGG | + | chr2.1:46052712-46052731 | MS.gene068902:CDS | 45.0% | |
ATTGTAGTGTACCCCACTTG+CGG | - | chr2.1:46054183-46054202 | None:intergenic | 45.0% | |
CACACAAGTAGACCCTAACT+TGG | + | chr2.1:46052596-46052615 | MS.gene068902:CDS | 45.0% | |
CAGCGGTAATGTTGCAGAAT+TGG | - | chr2.1:46056079-46056098 | None:intergenic | 45.0% | |
CATCCCCTGCTAAATTTGCA+AGG | + | chr2.1:46053144-46053163 | MS.gene068902:intron | 45.0% | |
CTCCCCTTGCAAATTTAGCA+GGG | - | chr2.1:46053151-46053170 | None:intergenic | 45.0% | |
GGTAAACGAAGCTTCATCGA+CGG | + | chr2.1:46052906-46052925 | MS.gene068902:CDS | 45.0% | |
GTAGCATTCACTGCTGGATT+AGG | + | chr2.1:46056410-46056429 | MS.gene068902:CDS | 45.0% | |
GTCCCCGGTCGTAATAAAAA+TGG | - | chr2.1:46051764-46051783 | None:intergenic | 45.0% | |
GTCGCCGCAAATTATTTACG+AGG | + | chr2.1:46053119-46053138 | MS.gene068902:intron | 45.0% | |
GTGAATGCTACACCTGTTGT+GGG | - | chr2.1:46056401-46056420 | None:intergenic | 45.0% | |
GTTTCATAAGACCGCAAGTG+GGG | + | chr2.1:46054169-46054188 | MS.gene068902:intron | 45.0% | |
TATGAGAATGGGAAGGGTGA+CGG | - | chr2.1:46053542-46053561 | None:intergenic | 45.0% | |
TCCCCTGCTAAATTTGCAAG+GGG | + | chr2.1:46053146-46053165 | MS.gene068902:intron | 45.0% | |
TCCCCTTGCAAATTTAGCAG+GGG | - | chr2.1:46053150-46053169 | None:intergenic | 45.0% | |
TCTGCTGCTCAAAACCCTAA+AGG | + | chr2.1:46051179-46051198 | MS.gene068902:CDS | 45.0% | |
TGCAAATCCAGAGACATGCA+TGG | + | chr2.1:46052488-46052507 | MS.gene068902:CDS | 45.0% | |
TTGATGAGGACAGGAGTAGT+AGG | - | chr2.1:46054766-46054785 | None:intergenic | 45.0% | |
TTGTCCCCTGTTAGCTAGTT+GGG | - | chr2.1:46053497-46053516 | None:intergenic | 45.0% | |
TTTGTCCCCTGTTAGCTAGT+TGG | - | chr2.1:46053498-46053517 | None:intergenic | 45.0% | |
! | ATGAATTATGGGTCTGGAGC+TGG | + | chr2.1:46056272-46056291 | MS.gene068902:CDS | 45.0% |
! | CGGGAATTTTACCAAGGTGA+TGG | + | chr2.1:46052737-46052756 | MS.gene068902:CDS | 45.0% |
! | TTTCAGCTGTTGATGAGGAC+AGG | - | chr2.1:46054775-46054794 | None:intergenic | 45.0% |
! | TTTTCAGAACACTGCTGGTC+CGG | + | chr2.1:46055779-46055798 | MS.gene068902:CDS | 45.0% |
! | TTTTTGTGAGGGACATTGCG+AGG | + | chr2.1:46053074-46053093 | MS.gene068902:intron | 45.0% |
!! | CAATTTGGTGGTGCTGGATT+TGG | + | chr2.1:46051077-46051096 | MS.gene068902:CDS | 45.0% |
!! | CTGCGAGCATTGACATCATT+TGG | - | chr2.1:46052569-46052588 | None:intergenic | 45.0% |
!! | CTTTCTCAATTTGGTGGTGC+TGG | + | chr2.1:46051071-46051090 | MS.gene068902:CDS | 45.0% |
!! | GGCACGGTGGATTTTATCTT+TGG | + | chr2.1:46055933-46055952 | MS.gene068902:CDS | 45.0% |
!! | GGTTAGCTTGTGACCATGAT+AGG | + | chr2.1:46051641-46051660 | MS.gene068902:intron | 45.0% |
!! | TTTCCTCTGATGCACTGACT+TGG | + | chr2.1:46051150-46051169 | MS.gene068902:CDS | 45.0% |
!!! | TTTAGGGTTTTGAGCAGCAG+AGG | - | chr2.1:46051180-46051199 | None:intergenic | 45.0% |
!! | ATTATTATTATTATTATTGA+TGG | + | chr2.1:46052057-46052076 | MS.gene068902:intron | 5.0% |
!!! | AAAATATTAATACTTTTTTT+TGG | + | chr2.1:46052392-46052411 | MS.gene068902:intron | 5.0% |
!!! | TTTTTTTTTAGTATTATTAA+AGG | + | chr2.1:46054652-46054671 | MS.gene068902:intron | 5.0% |
AACGAAGCTTCATCGACGGT+TGG | + | chr2.1:46052910-46052929 | MS.gene068902:CDS | 50.0% | |
ACAGGTGTAGCATTCACTGC+TGG | + | chr2.1:46056404-46056423 | MS.gene068902:CDS | 50.0% | |
AGACCAAGTCAGTGCATCAG+AGG | - | chr2.1:46051156-46051175 | None:intergenic | 50.0% | |
AGGCACCCAACTAGCTAACA+GGG | + | chr2.1:46053489-46053508 | MS.gene068902:intron | 50.0% | |
AGTGATGTGGTGTGTGAGTG+AGG | + | chr2.1:46051620-46051639 | MS.gene068902:intron | 50.0% | |
AGTGATGTGTTGAGGCCAGA+AGG | + | chr2.1:46056194-46056213 | MS.gene068902:CDS | 50.0% | |
AGTGGCACTAAGATCCGACT+CGG | + | chr2.1:46055815-46055834 | MS.gene068902:CDS | 50.0% | |
CCGAGCCAACATGTTAACGA+CGG | - | chr2.1:46053792-46053811 | None:intergenic | 50.0% | |
GAATACAGAGAGGTCCGAGT+CGG | - | chr2.1:46055832-46055851 | None:intergenic | 50.0% | |
GAGTTCTATGTAGAGGTCCC+CGG | - | chr2.1:46051779-46051798 | None:intergenic | 50.0% | |
GATGTTGTCGTTGCTACCGA+TGG | + | chr2.1:46052711-46052730 | MS.gene068902:CDS | 50.0% | |
GGACATTGCGAGGAGCAAAA+TGG | + | chr2.1:46053084-46053103 | MS.gene068902:intron | 50.0% | |
GGGACAGTGCAAGATGTAGT+TGG | + | chr2.1:46051023-46051042 | MS.gene068902:CDS | 50.0% | |
GGTAAAATTCCCGCTCCCAT+CGG | - | chr2.1:46052730-46052749 | None:intergenic | 50.0% | |
GTGATGTGTTGAGGCCAGAA+GGG | + | chr2.1:46056195-46056214 | MS.gene068902:CDS | 50.0% | |
TAGGCACCCAACTAGCTAAC+AGG | + | chr2.1:46053488-46053507 | MS.gene068902:intron | 50.0% | |
TATGCGTGTAGAGGCTGTCT+TGG | - | chr2.1:46055878-46055897 | None:intergenic | 50.0% | |
TGTGCAGCTGTTAGTGGTAG+AGG | + | chr2.1:46055735-46055754 | MS.gene068902:intron | 50.0% | |
TGTGTGTGTGCAGCTGTTAG+TGG | + | chr2.1:46055729-46055748 | MS.gene068902:intron | 50.0% | |
! | CCGTCGTTAACATGTTGGCT+CGG | + | chr2.1:46053789-46053808 | MS.gene068902:intron | 50.0% |
! | TACCCCTTTGGAAACCCCAT+AGG | + | chr2.1:46053171-46053190 | MS.gene068902:intron | 50.0% |
! | TGGGAGCGGGAATTTTACCA+AGG | + | chr2.1:46052731-46052750 | MS.gene068902:CDS | 50.0% |
ATGCACCGCATCCATCACCT+TGG | - | chr2.1:46052751-46052770 | None:intergenic | 55.0% | |
ATGTGTTGAGGCCAGAAGGG+TGG | + | chr2.1:46056198-46056217 | MS.gene068902:CDS | 55.0% | |
GAAGGGTGGCTAGAGTGGAA+TGG | + | chr2.1:46056212-46056231 | MS.gene068902:CDS | 55.0% | |
GGCACCCAACTAGCTAACAG+GGG | + | chr2.1:46053490-46053509 | MS.gene068902:intron | 55.0% | |
GGCGCATTGTATGCGTGTAG+AGG | - | chr2.1:46055887-46055906 | None:intergenic | 55.0% | |
TCGACGGTTGGACCACGTTT+AGG | + | chr2.1:46052922-46052941 | MS.gene068902:CDS | 55.0% | |
TTCCACTCTAGCCACCCTTC+TGG | - | chr2.1:46056212-46056231 | None:intergenic | 55.0% | |
! | CGGATCTTAGTGCCACTGCT+TGG | - | chr2.1:46055812-46055831 | None:intergenic | 55.0% |
! | GGAGCACTAGCACATAGTGC+TGG | - | chr2.1:46050948-46050967 | None:intergenic | 55.0% |
!! | TTGCAAGGGGAGTACCCCTT+TGG | + | chr2.1:46053159-46053178 | MS.gene068902:intron | 55.0% |
CGGACAACAAGTTGCGTCGC+TGG | - | chr2.1:46051213-46051232 | None:intergenic | 60.0% | |
GTCGTTGCTACCGATGGGAG+CGG | + | chr2.1:46052717-46052736 | MS.gene068902:CDS | 60.0% | |
TCGTTGCTACCGATGGGAGC+GGG | + | chr2.1:46052718-46052737 | MS.gene068902:CDS | 60.0% | |
!! | GCCACTGCTTGGTGCTTCTC+CGG | - | chr2.1:46055801-46055820 | None:intergenic | 60.0% |
!! | TCCGGAGAAGCACCAAGCAG+TGG | + | chr2.1:46055797-46055816 | MS.gene068902:CDS | 60.0% |
GGCCAGAAGGGTGGCTAGAG+TGG | + | chr2.1:46056207-46056226 | MS.gene068902:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 46050846 | 46056439 | 46050846 | ID=MS.gene068902 |
chr2.1 | mRNA | 46050846 | 46056439 | 46050846 | ID=MS.gene068902.t1;Parent=MS.gene068902 |
chr2.1 | exon | 46050846 | 46051200 | 46050846 | ID=MS.gene068902.t1.exon1;Parent=MS.gene068902.t1 |
chr2.1 | CDS | 46050846 | 46051200 | 46050846 | ID=cds.MS.gene068902.t1;Parent=MS.gene068902.t1 |
chr2.1 | exon | 46052427 | 46052957 | 46052427 | ID=MS.gene068902.t1.exon2;Parent=MS.gene068902.t1 |
chr2.1 | CDS | 46052427 | 46052957 | 46052427 | ID=cds.MS.gene068902.t1;Parent=MS.gene068902.t1 |
chr2.1 | exon | 46055742 | 46056439 | 46055742 | ID=MS.gene068902.t1.exon3;Parent=MS.gene068902.t1 |
chr2.1 | CDS | 46055742 | 46056439 | 46055742 | ID=cds.MS.gene068902.t1;Parent=MS.gene068902.t1 |
Gene Sequence |
Protein sequence |