Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069487.t1 | XP_003620187.1 | 96.7 | 211 | 7 | 0 | 1 | 211 | 1 | 211 | 5.40E-117 | 430.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069487.t1 | P13087 | 40.3 | 211 | 105 | 6 | 11 | 211 | 17 | 216 | 1.3e-34 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069487.t1 | G7KKQ9 | 96.7 | 211 | 7 | 0 | 1 | 211 | 1 | 211 | 3.9e-117 | 430.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene069487 | -0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene069487 | -0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene069487 | -0.824908 | 6.25E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene069487 | -0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene069487 | -0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene069487 | -0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene069487 | -0.844218 | 8.66E-59 | -1.69E-46 |
| MS.gene050426 | MS.gene069487 | 0.819767 | 9.77E-53 | -1.69E-46 |
| MS.gene050464 | MS.gene069487 | -0.839425 | 1.60E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene069487 | -0.825983 | 3.48E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene069487 | -0.803339 | 3.65E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene069487 | -0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene069487 | -0.841102 | 5.83E-58 | -1.69E-46 |
| MS.gene051158 | MS.gene069487 | 0.816815 | 4.55E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene069487 | -0.860131 | 2.56E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene069487 | -0.825977 | 3.49E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene069487 | 0.853309 | 2.60E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene069487 | -0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene069487 | -0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene069487 | -0.829497 | 4.98E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene069487 | -0.847979 | 8.21E-60 | -1.69E-46 |
| MS.gene05227 | MS.gene069487 | 0.810879 | 9.25E-51 | -1.69E-46 |
| MS.gene05233 | MS.gene069487 | 0.907958 | 2.88E-81 | -1.69E-46 |
| MS.gene052340 | MS.gene069487 | -0.814999 | 1.16E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene069487 | -0.843509 | 1.34E-58 | -1.69E-46 |
| MS.gene054011 | MS.gene069487 | -0.812955 | 3.27E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene069487 | -0.803467 | 3.44E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene069487 | -0.857116 | 2.03E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene069487 | -0.811925 | 5.49E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene069487 | -0.819686 | 1.02E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene069487 | -0.811518 | 6.73E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene069487 | -0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene069487 | -0.815907 | 7.27E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene069487 | -0.828202 | 1.02E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene069487 | -0.804744 | 1.87E-49 | -1.69E-46 |
| MS.gene055601 | MS.gene069487 | 0.876637 | 1.19E-68 | -1.69E-46 |
| MS.gene055604 | MS.gene069487 | -0.818645 | 1.76E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene069487 | -0.804856 | 1.77E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene069487 | 0.808988 | 2.36E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene069487 | -0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene069487 | -0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene069487 | 0.887006 | 2.08E-72 | -1.69E-46 |
| MS.gene056979 | MS.gene069487 | -0.81896 | 1.49E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene069487 | -0.802049 | 6.75E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene069487 | -0.809927 | 1.49E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene069487 | -0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene069487 | -0.805278 | 1.44E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene069487 | -0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene069487 | -0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene057779 | MS.gene069487 | -0.803732 | 3.03E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene069487 | -0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene069487 | -0.828794 | 7.37E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene069487 | -0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene069487 | 0.864503 | 1.16E-64 | -1.69E-46 |
| MS.gene058660 | MS.gene069487 | -0.816525 | 5.29E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene069487 | -0.828431 | 9.03E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene069487 | -0.810753 | 9.85E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene069487 | -0.834045 | 3.76E-56 | -1.69E-46 |
| MS.gene059043 | MS.gene069487 | 0.824745 | 6.84E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene069487 | -0.833905 | 4.08E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene069487 | -0.829357 | 5.38E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene069487 | -0.852916 | 3.37E-61 | -1.69E-46 |
| MS.gene059366 | MS.gene069487 | -0.802056 | 6.72E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene069487 | -0.852901 | 3.41E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene069487 | -0.862172 | 6.12E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene069487 | -0.815812 | 7.63E-52 | -1.69E-46 |
| MS.gene060247 | MS.gene069487 | -0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene069487 | -0.802649 | 5.08E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene069487 | -0.86191 | 7.36E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069487.t1 | MTR_6g078280 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 8.50e-155 | 427 |
| MS.gene069487.t1 | MTR_6g078260 | 69.154 | 201 | 42 | 5 | 15 | 212 | 16 | 199 | 5.82e-95 | 275 |
| MS.gene069487.t1 | MTR_6g078140 | 59.701 | 201 | 73 | 5 | 15 | 211 | 16 | 212 | 2.04e-74 | 224 |
| MS.gene069487.t1 | MTR_6g078120 | 59.701 | 201 | 73 | 5 | 15 | 211 | 16 | 212 | 1.62e-73 | 221 |
| MS.gene069487.t1 | MTR_6g078290 | 52.558 | 215 | 92 | 6 | 1 | 210 | 1 | 210 | 5.10e-68 | 207 |
| MS.gene069487.t1 | MTR_6g078250 | 53.023 | 215 | 87 | 5 | 1 | 212 | 1 | 204 | 1.56e-65 | 201 |
| MS.gene069487.t1 | MTR_7g037410 | 44.444 | 189 | 90 | 5 | 26 | 211 | 25 | 201 | 5.08e-50 | 161 |
| MS.gene069487.t1 | MTR_6g078100 | 38.462 | 221 | 109 | 10 | 1 | 211 | 1 | 204 | 1.16e-35 | 125 |
| MS.gene069487.t1 | MTR_6g078070 | 37.156 | 218 | 114 | 9 | 1 | 211 | 1 | 202 | 2.55e-32 | 116 |
| MS.gene069487.t1 | MTR_0211s0080 | 29.577 | 213 | 119 | 10 | 9 | 211 | 6 | 197 | 1.47e-13 | 67.0 |
| MS.gene069487.t1 | MTR_6g009563 | 30.097 | 206 | 121 | 7 | 3 | 203 | 6 | 193 | 5.20e-13 | 65.5 |
| MS.gene069487.t1 | MTR_3g106620 | 31.111 | 225 | 111 | 13 | 6 | 212 | 1 | 199 | 5.30e-13 | 65.9 |
| MS.gene069487.t1 | MTR_8g461050 | 30.189 | 212 | 123 | 10 | 9 | 211 | 6 | 201 | 6.22e-13 | 65.5 |
| MS.gene069487.t1 | MTR_0100s0150 | 29.108 | 213 | 123 | 10 | 9 | 211 | 6 | 200 | 7.20e-13 | 65.1 |
| MS.gene069487.t1 | MTR_0084s0030 | 30.374 | 214 | 120 | 12 | 9 | 211 | 6 | 201 | 8.96e-13 | 64.7 |
| MS.gene069487.t1 | MTR_6g009650 | 31.053 | 190 | 107 | 7 | 23 | 203 | 18 | 192 | 7.52e-12 | 62.4 |
| MS.gene069487.t1 | MTR_6g066190 | 30.168 | 179 | 105 | 6 | 30 | 203 | 29 | 192 | 1.73e-11 | 61.6 |
| MS.gene069487.t1 | MTR_3g106585 | 29.302 | 215 | 119 | 12 | 5 | 212 | 9 | 197 | 1.98e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069487.t1 | AT1G17860 | 37.963 | 216 | 107 | 9 | 1 | 211 | 1 | 194 | 3.08e-39 | 134 |
| MS.gene069487.t1 | AT1G73325 | 32.889 | 225 | 114 | 11 | 1 | 211 | 1 | 202 | 4.56e-22 | 90.1 |
| MS.gene069487.t1 | AT1G73260 | 31.280 | 211 | 122 | 11 | 8 | 212 | 12 | 205 | 6.93e-20 | 84.3 |
| MS.gene069487.t1 | AT1G73330 | 30.317 | 221 | 116 | 13 | 1 | 212 | 1 | 192 | 6.06e-15 | 70.9 |
Find 51 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTGAAACTTAACTTTAA+AGG | 0.154767 | 6.4:+53324097 | None:intergenic |
| CATCTTCATACTTCTCAATT+TGG | 0.163418 | 6.4:+53324234 | None:intergenic |
| ACAAAGCCACATATTGTAAA+TGG | 0.283069 | 6.4:+53324557 | None:intergenic |
| AATGTTTCTTCTTTAGAAAA+AGG | 0.285974 | 6.4:+53324314 | None:intergenic |
| TTCTGAAACTTAACTTTAAA+GGG | 0.298093 | 6.4:+53324098 | None:intergenic |
| AGCCGGAATGATGTAGTAAT+TGG | 0.358723 | 6.4:+53324583 | None:intergenic |
| AACCATGTATGCAAAGATAT+TGG | 0.371437 | 6.4:-53324170 | MS.gene069487:CDS |
| AACGCCTTTCTTGTTGTTAA+CGG | 0.386453 | 6.4:+53324427 | None:intergenic |
| GTGACTACTAATGGTGTATT+GGG | 0.404413 | 6.4:-53324290 | MS.gene069487:CDS |
| ACGCCTTTCTTGTTGTTAAC+GGG | 0.404872 | 6.4:+53324428 | None:intergenic |
| TTCCAATATCTTTGCATACA+TGG | 0.418385 | 6.4:+53324168 | None:intergenic |
| GAAACATTTGTGACTACTAA+TGG | 0.419288 | 6.4:-53324299 | MS.gene069487:CDS |
| TGCATACATGGTTGCAAGTA+GGG | 0.429484 | 6.4:+53324180 | None:intergenic |
| GCTAAGCCATTTACAATATG+TGG | 0.430563 | 6.4:-53324563 | MS.gene069487:CDS |
| TGTGACTACTAATGGTGTAT+TGG | 0.442930 | 6.4:-53324291 | MS.gene069487:CDS |
| TTGTCTTCGCAACCACTACT+TGG | 0.447050 | 6.4:-53324668 | MS.gene069487:CDS |
| TACCAATTACTACATCATTC+CGG | 0.457107 | 6.4:-53324585 | MS.gene069487:CDS |
| TAAGACTAGGGAAATGCGTT+TGG | 0.471251 | 6.4:-53324135 | MS.gene069487:CDS |
| TTTGTTAGTTGTTTCAATAG+TGG | 0.473075 | 6.4:-53324539 | MS.gene069487:CDS |
| GTTCAAATACAATCCACAAT+TGG | 0.476445 | 6.4:-53324259 | MS.gene069487:CDS |
| CATATTGTAAATGGCTTAGC+CGG | 0.479615 | 6.4:+53324566 | None:intergenic |
| TCTCAATTTGGAACCAATTG+TGG | 0.486271 | 6.4:+53324246 | None:intergenic |
| CGATGTGTCAATGACTTGAT+CGG | 0.502159 | 6.4:+53324628 | None:intergenic |
| GAACTTTATGTTGAGATCAG+TGG | 0.505826 | 6.4:+53324394 | None:intergenic |
| TTGCAAGTAGGGCACACATT+AGG | 0.510934 | 6.4:+53324191 | None:intergenic |
| TTGCATACATGGTTGCAAGT+AGG | 0.520717 | 6.4:+53324179 | None:intergenic |
| GTAGTTGTGAAACATAATCA+AGG | 0.526996 | 6.4:-53324470 | MS.gene069487:CDS |
| AGGATCAATCTTCCACACTA+AGG | 0.534325 | 6.4:+53324334 | None:intergenic |
| TTGTGGATTGTATTTGAACC+CGG | 0.536118 | 6.4:+53324263 | None:intergenic |
| GTATGAAGATGCTTATAAGT+TGG | 0.537055 | 6.4:-53324222 | MS.gene069487:CDS |
| GAATTTACGTGTATAAGACT+AGG | 0.540719 | 6.4:-53324148 | MS.gene069487:CDS |
| ATAATCAAGGTTTACCGTTG+AGG | 0.542322 | 6.4:-53324457 | MS.gene069487:CDS |
| TTCCACACTAAGGAATGGTT+AGG | 0.542536 | 6.4:+53324344 | None:intergenic |
| GTTAGTTGTTTCAATAGTGG+AGG | 0.542635 | 6.4:-53324536 | MS.gene069487:CDS |
| GATGTGTCAATGACTTGATC+GGG | 0.551157 | 6.4:+53324629 | None:intergenic |
| TAATGGTGTATTGGGAAACC+CGG | 0.551726 | 6.4:-53324282 | MS.gene069487:CDS |
| CTTTAAAGTTAAGTTTCAGA+AGG | 0.553919 | 6.4:-53324096 | MS.gene069487:CDS |
| GTCCTAACCATTCCTTAGTG+TGG | 0.567409 | 6.4:-53324346 | MS.gene069487:CDS |
| ACACCCGTTAACAACAAGAA+AGG | 0.576147 | 6.4:-53324431 | MS.gene069487:CDS |
| AATTTACGTGTATAAGACTA+GGG | 0.580702 | 6.4:-53324147 | MS.gene069487:CDS |
| GATCAAGTCATTGACACATC+GGG | 0.588958 | 6.4:-53324626 | MS.gene069487:CDS |
| TTCACAACTACTACATCAAG+AGG | 0.592646 | 6.4:+53324482 | None:intergenic |
| GGCATTGCTCTTGAAACCGT+CGG | 0.595900 | 6.4:-53324515 | MS.gene069487:CDS |
| CAATCTTCCACACTAAGGAA+TGG | 0.596624 | 6.4:+53324339 | None:intergenic |
| TGTGGATTGTATTTGAACCC+GGG | 0.605984 | 6.4:+53324264 | None:intergenic |
| GCTTCAGTTGATCCAAGTAG+TGG | 0.616203 | 6.4:+53324656 | None:intergenic |
| CGATCAAGTCATTGACACAT+CGG | 0.616565 | 6.4:-53324627 | MS.gene069487:CDS |
| TTAACGGGTGTGAACCTCAA+CGG | 0.621698 | 6.4:+53324443 | None:intergenic |
| AAGAGGGCAAGATTCTCCGA+CGG | 0.655925 | 6.4:+53324499 | None:intergenic |
| AATGGTGTATTGGGAAACCC+GGG | 0.666072 | 6.4:-53324281 | MS.gene069487:CDS |
| TCACAACTACTACATCAAGA+GGG | 0.703659 | 6.4:+53324483 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTCTTCTTTAGAAAA+AGG | + | chr6.4:53324487-53324506 | None:intergenic | 20.0% |
| !!! | TTCTGAAACTTAACTTTAAA+GGG | + | chr6.4:53324703-53324722 | None:intergenic | 20.0% |
| ! | AATTTACGTGTATAAGACTA+GGG | - | chr6.4:53324651-53324670 | MS.gene069487:CDS | 25.0% |
| !! | TTTGTTAGTTGTTTCAATAG+TGG | - | chr6.4:53324259-53324278 | MS.gene069487:CDS | 25.0% |
| !!! | CTTCTGAAACTTAACTTTAA+AGG | + | chr6.4:53324704-53324723 | None:intergenic | 25.0% |
| !!! | CTTTAAAGTTAAGTTTCAGA+AGG | - | chr6.4:53324702-53324721 | MS.gene069487:CDS | 25.0% |
| AACCATGTATGCAAAGATAT+TGG | - | chr6.4:53324628-53324647 | MS.gene069487:CDS | 30.0% | |
| ACAAAGCCACATATTGTAAA+TGG | + | chr6.4:53324244-53324263 | None:intergenic | 30.0% | |
| CATCTTCATACTTCTCAATT+TGG | + | chr6.4:53324567-53324586 | None:intergenic | 30.0% | |
| GAAACATTTGTGACTACTAA+TGG | - | chr6.4:53324499-53324518 | MS.gene069487:CDS | 30.0% | |
| GAATTTACGTGTATAAGACT+AGG | - | chr6.4:53324650-53324669 | MS.gene069487:CDS | 30.0% | |
| GTAGTTGTGAAACATAATCA+AGG | - | chr6.4:53324328-53324347 | MS.gene069487:CDS | 30.0% | |
| GTATGAAGATGCTTATAAGT+TGG | - | chr6.4:53324576-53324595 | MS.gene069487:CDS | 30.0% | |
| GTTCAAATACAATCCACAAT+TGG | - | chr6.4:53324539-53324558 | MS.gene069487:CDS | 30.0% | |
| TACCAATTACTACATCATTC+CGG | - | chr6.4:53324213-53324232 | MS.gene069487:CDS | 30.0% | |
| TTCCAATATCTTTGCATACA+TGG | + | chr6.4:53324633-53324652 | None:intergenic | 30.0% | |
| ATAATCAAGGTTTACCGTTG+AGG | - | chr6.4:53324341-53324360 | MS.gene069487:CDS | 35.0% | |
| CATATTGTAAATGGCTTAGC+CGG | + | chr6.4:53324235-53324254 | None:intergenic | 35.0% | |
| GAACTTTATGTTGAGATCAG+TGG | + | chr6.4:53324407-53324426 | None:intergenic | 35.0% | |
| GCTAAGCCATTTACAATATG+TGG | - | chr6.4:53324235-53324254 | MS.gene069487:CDS | 35.0% | |
| GTGACTACTAATGGTGTATT+GGG | - | chr6.4:53324508-53324527 | MS.gene069487:CDS | 35.0% | |
| TCACAACTACTACATCAAGA+GGG | + | chr6.4:53324318-53324337 | None:intergenic | 35.0% | |
| TGTGACTACTAATGGTGTAT+TGG | - | chr6.4:53324507-53324526 | MS.gene069487:CDS | 35.0% | |
| TTCACAACTACTACATCAAG+AGG | + | chr6.4:53324319-53324338 | None:intergenic | 35.0% | |
| ! | GTTAGTTGTTTCAATAGTGG+AGG | - | chr6.4:53324262-53324281 | MS.gene069487:CDS | 35.0% |
| ! | TCTCAATTTGGAACCAATTG+TGG | + | chr6.4:53324555-53324574 | None:intergenic | 35.0% |
| ! | TTGTGGATTGTATTTGAACC+CGG | + | chr6.4:53324538-53324557 | None:intergenic | 35.0% |
| !! | AACGCCTTTCTTGTTGTTAA+CGG | + | chr6.4:53324374-53324393 | None:intergenic | 35.0% |
| ACACCCGTTAACAACAAGAA+AGG | - | chr6.4:53324367-53324386 | MS.gene069487:CDS | 40.0% | |
| AGCCGGAATGATGTAGTAAT+TGG | + | chr6.4:53324218-53324237 | None:intergenic | 40.0% | |
| AGGATCAATCTTCCACACTA+AGG | + | chr6.4:53324467-53324486 | None:intergenic | 40.0% | |
| CAATCTTCCACACTAAGGAA+TGG | + | chr6.4:53324462-53324481 | None:intergenic | 40.0% | |
| CGATCAAGTCATTGACACAT+CGG | - | chr6.4:53324171-53324190 | MS.gene069487:CDS | 40.0% | |
| CGATGTGTCAATGACTTGAT+CGG | + | chr6.4:53324173-53324192 | None:intergenic | 40.0% | |
| GATCAAGTCATTGACACATC+GGG | - | chr6.4:53324172-53324191 | MS.gene069487:CDS | 40.0% | |
| GATGTGTCAATGACTTGATC+GGG | + | chr6.4:53324172-53324191 | None:intergenic | 40.0% | |
| TAAGACTAGGGAAATGCGTT+TGG | - | chr6.4:53324663-53324682 | MS.gene069487:CDS | 40.0% | |
| TAATGGTGTATTGGGAAACC+CGG | - | chr6.4:53324516-53324535 | MS.gene069487:CDS | 40.0% | |
| TGCATACATGGTTGCAAGTA+GGG | + | chr6.4:53324621-53324640 | None:intergenic | 40.0% | |
| TTCCACACTAAGGAATGGTT+AGG | + | chr6.4:53324457-53324476 | None:intergenic | 40.0% | |
| TTGCATACATGGTTGCAAGT+AGG | + | chr6.4:53324622-53324641 | None:intergenic | 40.0% | |
| ! | TGTGGATTGTATTTGAACCC+GGG | + | chr6.4:53324537-53324556 | None:intergenic | 40.0% |
| !! | ACGCCTTTCTTGTTGTTAAC+GGG | + | chr6.4:53324373-53324392 | None:intergenic | 40.0% |
| AATGGTGTATTGGGAAACCC+GGG | - | chr6.4:53324517-53324536 | MS.gene069487:CDS | 45.0% | |
| GCTTCAGTTGATCCAAGTAG+TGG | + | chr6.4:53324145-53324164 | None:intergenic | 45.0% | |
| GTCCTAACCATTCCTTAGTG+TGG | - | chr6.4:53324452-53324471 | MS.gene069487:CDS | 45.0% | |
| TTGCAAGTAGGGCACACATT+AGG | + | chr6.4:53324610-53324629 | None:intergenic | 45.0% | |
| TTGTCTTCGCAACCACTACT+TGG | - | chr6.4:53324130-53324149 | MS.gene069487:CDS | 45.0% | |
| ! | TTAACGGGTGTGAACCTCAA+CGG | + | chr6.4:53324358-53324377 | None:intergenic | 45.0% |
| AAGAGGGCAAGATTCTCCGA+CGG | + | chr6.4:53324302-53324321 | None:intergenic | 50.0% | |
| GGCATTGCTCTTGAAACCGT+CGG | - | chr6.4:53324283-53324302 | MS.gene069487:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 53324091 | 53324729 | 53324091 | ID=MS.gene069487 |
| chr6.4 | mRNA | 53324091 | 53324729 | 53324091 | ID=MS.gene069487.t1;Parent=MS.gene069487 |
| chr6.4 | exon | 53324091 | 53324729 | 53324091 | ID=MS.gene069487.t1.exon1;Parent=MS.gene069487.t1 |
| chr6.4 | CDS | 53324091 | 53324729 | 53324091 | ID=cds.MS.gene069487.t1;Parent=MS.gene069487.t1 |
| Gene Sequence |
| Protein sequence |
