Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07016.t1 | XP_013450381.1 | 98.5 | 781 | 12 | 0 | 1 | 781 | 103 | 883 | 0.00E+00 | 1509.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07016.t1 | P0DKG8 | 71.7 | 780 | 216 | 4 | 4 | 781 | 107 | 883 | 0.0e+00 | 1117.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07016.t1 | A0A072U3V9 | 98.5 | 781 | 12 | 0 | 1 | 781 | 103 | 883 | 0.0e+00 | 1509.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene07016 | 0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene07016 | 0.802 | 6.91E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene07016 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene07016 | 0.80254 | 5.35E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene07016 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene050404 | MS.gene07016 | 0.846764 | 1.77E-59 | -1.69E-46 |
| MS.gene050406 | MS.gene07016 | 0.842986 | 1.85E-58 | -1.69E-46 |
| MS.gene050426 | MS.gene07016 | -0.819506 | 1.12E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene07016 | 0.806709 | 7.21E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene07016 | 0.848895 | 4.58E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene07016 | 0.812025 | 5.22E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene07016 | 0.868242 | 7.55E-66 | -1.69E-46 |
| MS.gene051171 | MS.gene07016 | 0.883221 | 5.39E-71 | -1.69E-46 |
| MS.gene051208 | MS.gene07016 | 0.842188 | 3.01E-58 | -1.69E-46 |
| MS.gene051240 | MS.gene07016 | 0.827656 | 1.39E-54 | -1.69E-46 |
| MS.gene051242 | MS.gene07016 | 0.881142 | 3.07E-70 | -1.69E-46 |
| MS.gene051244 | MS.gene07016 | 0.8687 | 5.37E-66 | -1.69E-46 |
| MS.gene051525 | MS.gene07016 | 0.822922 | 1.83E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene07016 | 0.859935 | 2.93E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene07016 | -0.813998 | 1.93E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene07016 | 0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene07016 | 0.849229 | 3.70E-60 | -1.69E-46 |
| MS.gene052135 | MS.gene07016 | 0.843721 | 1.18E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene07016 | 0.830161 | 3.43E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene07016 | 0.820011 | 8.59E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene07016 | 0.844552 | 7.05E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene07016 | 0.851608 | 7.94E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene07016 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene07016 | 0.802368 | 5.80E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene07016 | 0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene07016 | 0.906041 | 2.27E-80 | -1.69E-46 |
| MS.gene053557 | MS.gene07016 | 0.803837 | 2.88E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene07016 | 0.814713 | 1.34E-51 | -1.69E-46 |
| MS.gene053907 | MS.gene07016 | 0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene07016 | 0.8667 | 2.35E-65 | -1.69E-46 |
| MS.gene054102 | MS.gene07016 | 0.840223 | 9.90E-58 | -1.69E-46 |
| MS.gene054110 | MS.gene07016 | 0.836555 | 8.74E-57 | -1.69E-46 |
| MS.gene05413 | MS.gene07016 | 0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene07016 | 0.814362 | 1.60E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene07016 | 0.850836 | 1.31E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene07016 | 0.81495 | 1.19E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene07016 | 0.893714 | 4.86E-75 | -1.69E-46 |
| MS.gene055428 | MS.gene07016 | 0.834193 | 3.45E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene07016 | 0.826569 | 2.52E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene07016 | 0.871913 | 4.76E-67 | -1.69E-46 |
| MS.gene056305 | MS.gene07016 | 0.831992 | 1.22E-55 | -1.69E-46 |
| MS.gene056337 | MS.gene07016 | 0.806458 | 8.15E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene07016 | 0.844184 | 8.85E-59 | -1.69E-46 |
| MS.gene056612 | MS.gene07016 | 0.829223 | 5.81E-55 | -1.69E-46 |
| MS.gene056633 | MS.gene07016 | 0.890885 | 6.57E-74 | -1.69E-46 |
| MS.gene056659 | MS.gene07016 | 0.82637 | 2.82E-54 | -1.69E-46 |
| MS.gene056664 | MS.gene07016 | 0.8877 | 1.13E-72 | -1.69E-46 |
| MS.gene056796 | MS.gene07016 | 0.822769 | 1.98E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene07016 | -0.807414 | 5.11E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene07016 | 0.837844 | 4.09E-57 | -1.69E-46 |
| MS.gene057196 | MS.gene07016 | 0.838515 | 2.75E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene07016 | 0.818353 | 2.05E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene07016 | 0.81366 | 2.29E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene07016 | 0.802541 | 5.34E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene07016 | 0.846145 | 2.61E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene07016 | 0.810793 | 9.66E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene07016 | 0.863356 | 2.64E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene07016 | 0.883958 | 2.89E-71 | -1.69E-46 |
| MS.gene058276 | MS.gene07016 | 0.869559 | 2.83E-66 | -1.69E-46 |
| MS.gene058365 | MS.gene07016 | 0.811566 | 6.57E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene07016 | 0.814712 | 1.34E-51 | -1.69E-46 |
| MS.gene058743 | MS.gene07016 | 0.820676 | 6.05E-53 | -1.69E-46 |
| MS.gene058746 | MS.gene07016 | 0.905151 | 5.81E-80 | -1.69E-46 |
| MS.gene059011 | MS.gene07016 | 0.81089 | 9.21E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene07016 | 0.819698 | 1.01E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene07016 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene07016 | 0.804573 | 2.02E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene07016 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene059512 | MS.gene07016 | 0.816229 | 6.16E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene07016 | 0.8276 | 1.43E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene07016 | 0.802575 | 5.26E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene07016 | 0.815919 | 7.22E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene07016 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene07016 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene07016 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene059869 | MS.gene07016 | -0.81708 | 3.97E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene07016 | 0.854724 | 1.02E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene07016 | 0.802464 | 5.54E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene07016 | 0.916063 | 2.79E-85 | -1.69E-46 |
| MS.gene061049 | MS.gene07016 | 0.847366 | 1.21E-59 | -1.69E-46 |
| MS.gene061159 | MS.gene07016 | 0.803057 | 4.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 179 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGGACTTCTTTATATTT+TGG | 0.117821 | 7.3:+5863057 | None:intergenic |
| TGAAGGAAATTTAGAAAATT+TGG | 0.135903 | 7.3:-5862419 | MS.gene07016:intron |
| GGACCTTCGGCAAATGTTTC+TGG | 0.140517 | 7.3:-5868353 | MS.gene07016:CDS |
| GCAGATTTGCTATCATGTTC+TGG | 0.190657 | 7.3:-5865678 | MS.gene07016:intron |
| CAAAGCAAACCTGTGCAATT+TGG | 0.221140 | 7.3:+5865952 | None:intergenic |
| CACTGTTACAAGAGATCTTC+TGG | 0.241677 | 7.3:-5864850 | MS.gene07016:CDS |
| GAGAGGATAGAGGAGGAATT+TGG | 0.243763 | 7.3:-5868597 | MS.gene07016:CDS |
| TGGACTAACTCCAGTTCTTT+AGG | 0.245830 | 7.3:+5869018 | None:intergenic |
| AGATCAAATACCGGGTGTTT+TGG | 0.268009 | 7.3:-5862273 | MS.gene07016:CDS |
| CCAGTAGCTCCAAACATAAA+AGG | 0.272058 | 7.3:-5863278 | MS.gene07016:CDS |
| TATATGATACACACTGAAAT+TGG | 0.278187 | 7.3:-5864614 | MS.gene07016:CDS |
| TTCACCTTTGCATAATCTTC+AGG | 0.279113 | 7.3:+5866516 | None:intergenic |
| GCTTGGGATGTATCAAATTA+AGG | 0.281559 | 7.3:-5866775 | MS.gene07016:intron |
| CTCCTTTGGCAAAGTTGCTT+GGG | 0.299059 | 7.3:-5866791 | MS.gene07016:CDS |
| CTGTGTGTAAAGAGCCTTAC+AGG | 0.317355 | 7.3:-5866203 | MS.gene07016:intron |
| GTTGAGGTTGCACGGATTCT+TGG | 0.319585 | 7.3:-5868802 | MS.gene07016:CDS |
| CTTTCTCATGTTCTTTGAAT+AGG | 0.319692 | 7.3:+5866478 | None:intergenic |
| CAGATTTGCTATCATGTTCT+GGG | 0.322566 | 7.3:-5865677 | MS.gene07016:CDS |
| TACATACAGATCTAGGAATA+GGG | 0.332916 | 7.3:+5865633 | None:intergenic |
| GCCTCATGGCACAATATAGA+AGG | 0.336893 | 7.3:-5863003 | MS.gene07016:CDS |
| ATTACAGGTATTTGCTCCTT+TGG | 0.341930 | 7.3:-5866805 | MS.gene07016:CDS |
| GCTCCTTTGGCAAAGTTGCT+TGG | 0.345703 | 7.3:-5866792 | MS.gene07016:CDS |
| ATACATACAGATCTAGGAAT+AGG | 0.350804 | 7.3:+5865632 | None:intergenic |
| ATTGTTAACTTGAATCATAT+TGG | 0.354666 | 7.3:+5863080 | None:intergenic |
| AGTGGGAGAGAATTCGTTAC+TGG | 0.356793 | 7.3:-5865186 | MS.gene07016:CDS |
| AGCTTACCGTAAAAGCATTA+TGG | 0.356855 | 7.3:+5868998 | None:intergenic |
| CATTTGTCCAGGAACTTGAT+TGG | 0.368685 | 7.3:-5868680 | MS.gene07016:intron |
| CAAAGCCGTGCGTTGGGGTT+GGG | 0.369858 | 7.3:-5865818 | MS.gene07016:CDS |
| TGTACCTCCCACAAACTTCC+AGG | 0.375552 | 7.3:+5869190 | None:intergenic |
| ATTGCAACCCCTAAACCTAA+TGG | 0.376245 | 7.3:-5865484 | MS.gene07016:CDS |
| CATTGCAATGGAGACATTAC+AGG | 0.381847 | 7.3:-5866820 | MS.gene07016:CDS |
| TTAAACCAAAGCCGTGCGTT+GGG | 0.385297 | 7.3:-5865824 | MS.gene07016:CDS |
| TGGGGTTGATCCATGGAATC+TGG | 0.390644 | 7.3:-5865658 | MS.gene07016:CDS |
| GGTCTAAGAATTGATCATCT+TGG | 0.398616 | 7.3:+5866253 | None:intergenic |
| TATGTTCAGGCTTGAAATAC+AGG | 0.403830 | 7.3:-5865416 | MS.gene07016:intron |
| GTAGATTAGAACAGAAGAAA+TGG | 0.405177 | 7.3:-5865244 | MS.gene07016:intron |
| CCAACCCCAACGCACGGCTT+TGG | 0.406391 | 7.3:+5865819 | None:intergenic |
| ATGGCAGTTGTCTTGTTCTT+CGG | 0.412219 | 7.3:-5869245 | MS.gene07016:CDS |
| CATGAGCTCTAGGGAATTTG+TGG | 0.417115 | 7.3:-5864874 | MS.gene07016:CDS |
| ACATATGCCTCCACATAAAC+AGG | 0.418695 | 7.3:-5868143 | MS.gene07016:intron |
| ACCAGCTGTGGACTGCATAA+AGG | 0.423090 | 7.3:+5865795 | None:intergenic |
| AACGACCAGGCTGAGGTTGA+TGG | 0.426492 | 7.3:-5862475 | MS.gene07016:intron |
| GGCATTGCAGCTCACTATAG+TGG | 0.428991 | 7.3:-5865204 | MS.gene07016:CDS |
| ATTTGTCCAGGAACTTGATT+GGG | 0.429628 | 7.3:-5868679 | MS.gene07016:intron |
| CTAGATTTGCATCTAGAGAA+TGG | 0.434783 | 7.3:-5869264 | None:intergenic |
| CAGTAGCTCCAAACATAAAA+GGG | 0.435513 | 7.3:-5863277 | MS.gene07016:CDS |
| GTATCTTCCTCCTAAAGAAC+TGG | 0.435659 | 7.3:-5869028 | MS.gene07016:CDS |
| AGAATCCGTGCAACCTCAAC+CGG | 0.436241 | 7.3:+5868805 | None:intergenic |
| TCCCAACTAGGTGTCAAAGC+TGG | 0.436553 | 7.3:-5868428 | MS.gene07016:intron |
| AACAATTATTTCAGGCATGA+TGG | 0.437402 | 7.3:-5862665 | MS.gene07016:intron |
| GATTGGGAGTCAATTGCTGC+TGG | 0.437948 | 7.3:-5868663 | MS.gene07016:CDS |
| TTGCAACCCCTAAACCTAAT+GGG | 0.442273 | 7.3:-5865483 | MS.gene07016:CDS |
| TCCTGCCAGGTTTAGAAAGT+TGG | 0.448380 | 7.3:-5863041 | MS.gene07016:CDS |
| AACAAAATACATACAGATCT+AGG | 0.449095 | 7.3:+5865626 | None:intergenic |
| GCCTTTATGCAGTCCACAGC+TGG | 0.449575 | 7.3:-5865796 | MS.gene07016:intron |
| CCAAAGCCGTGCGTTGGGGT+TGG | 0.452445 | 7.3:-5865819 | MS.gene07016:CDS |
| GAGAGAATTCGTTACTGGCT+TGG | 0.454991 | 7.3:-5865181 | MS.gene07016:CDS |
| CTTCATCATTCATCCGGTTG+AGG | 0.455435 | 7.3:-5868818 | MS.gene07016:CDS |
| GTTATGTTATTTCAAGTTGA+AGG | 0.457526 | 7.3:-5862436 | MS.gene07016:CDS |
| GCTGAGGTTGATGGCGGAAG+GGG | 0.457562 | 7.3:-5862466 | MS.gene07016:CDS |
| ATGTAAATTTGAAGGGCAAA+GGG | 0.462707 | 7.3:-5863131 | MS.gene07016:CDS |
| ATGGAAATTACCTGTTTATG+TGG | 0.465464 | 7.3:+5868133 | None:intergenic |
| CCCAACTAGGTGTCAAAGCT+GGG | 0.468219 | 7.3:-5868427 | MS.gene07016:intron |
| ATGGAATCACAGTGCTATGA+AGG | 0.470768 | 7.3:+5865452 | None:intergenic |
| ATGTGAAAGCAGAGGACCTT+CGG | 0.473982 | 7.3:-5868366 | MS.gene07016:CDS |
| AGGCTGAGGTTGATGGCGGA+AGG | 0.474494 | 7.3:-5862468 | MS.gene07016:CDS |
| TCTAATTGCATCAGGACCTT+AGG | 0.478487 | 7.3:-5869062 | MS.gene07016:intron |
| AGACCTTATGACAGTTAAAA+CGG | 0.479370 | 7.3:-5866235 | MS.gene07016:CDS |
| ATCCACTGTTACCTCTCCAC+TGG | 0.480367 | 7.3:+5864803 | None:intergenic |
| CGTGCATCATGTAAATTTGA+AGG | 0.483447 | 7.3:-5863139 | MS.gene07016:CDS |
| TTGTTGGCAACATGAGCTCT+AGG | 0.486743 | 7.3:-5864884 | MS.gene07016:CDS |
| ACTGTCCTTCAGAGTAAGAA+TGG | 0.489568 | 7.3:-5863204 | MS.gene07016:CDS |
| GATCAGGAAGCTTACCTCTT+CGG | 0.489957 | 7.3:+5862944 | None:intergenic |
| CTCTAGAGTAGATCAAATAC+CGG | 0.491186 | 7.3:-5862282 | MS.gene07016:CDS |
| CAAAGGGGACATGATGCTGC+AGG | 0.497067 | 7.3:-5863115 | MS.gene07016:CDS |
| GCTTGGACACCCAAGGTCAA+TGG | 0.497685 | 7.3:-5863177 | MS.gene07016:CDS |
| GGCTGAGGTTGATGGCGGAA+GGG | 0.499777 | 7.3:-5862467 | MS.gene07016:CDS |
| GAATTCGTTACTGGCTTGGT+TGG | 0.500544 | 7.3:-5865177 | MS.gene07016:CDS |
| CTTGAATCATATTGGAGACA+TGG | 0.502218 | 7.3:+5863088 | None:intergenic |
| CATGTTCTGGGGTTGATCCA+TGG | 0.504046 | 7.3:-5865665 | MS.gene07016:CDS |
| ACTTTCTCAGTGATTCTGAC+GGG | 0.507221 | 7.3:-5863332 | MS.gene07016:CDS |
| CTCAACCGGATGAATGATGA+AGG | 0.509670 | 7.3:+5868819 | None:intergenic |
| CGAACCCTTCATCATTCATC+CGG | 0.509821 | 7.3:-5868824 | MS.gene07016:CDS |
| GAGTGGCAAGAAGAGTTTGT+TGG | 0.510210 | 7.3:-5864900 | MS.gene07016:CDS |
| AGAGTAAGAATGGAAGTGCT+TGG | 0.510899 | 7.3:-5863194 | MS.gene07016:CDS |
| GGTTGATGGCGGAAGGGGAA+TGG | 0.511538 | 7.3:-5862461 | MS.gene07016:CDS |
| TTCATCCGGTTGAGGTTGCA+CGG | 0.513436 | 7.3:-5868810 | MS.gene07016:CDS |
| GGCTGAGGTCGCTACAGCAT+TGG | 0.515456 | 7.3:-5862644 | MS.gene07016:CDS |
| TTATCGTCAAATTAGCAGAC+AGG | 0.517261 | 7.3:-5868189 | MS.gene07016:CDS |
| ATTAAACCAAAGCCGTGCGT+TGG | 0.519871 | 7.3:-5865825 | MS.gene07016:CDS |
| TGAGATTAACCAAATTGCAC+AGG | 0.524101 | 7.3:-5865961 | MS.gene07016:intron |
| AAATATAAAGAAGTCCTGCC+AGG | 0.526449 | 7.3:-5863054 | MS.gene07016:CDS |
| GATGGTCTACTGGCTGTAGT+TGG | 0.526752 | 7.3:-5862250 | MS.gene07016:CDS |
| CATTGTGGAAGGAGAGACTA+AGG | 0.527478 | 7.3:-5868559 | MS.gene07016:intron |
| GCATTTGCAAGCACTCGTGC+AGG | 0.528305 | 7.3:+5864439 | None:intergenic |
| CTGTAGTTGGCCAAGCCTGA+TGG | 0.529497 | 7.3:-5862237 | MS.gene07016:CDS |
| CAACAAGATGGTAGCTGCAA+AGG | 0.530841 | 7.3:-5864591 | MS.gene07016:intron |
| GTTTCGTGGATTAACCTGTA+AGG | 0.534166 | 7.3:+5866189 | None:intergenic |
| CATGTAAATTTGAAGGGCAA+AGG | 0.535165 | 7.3:-5863132 | MS.gene07016:CDS |
| CTCATGTTCTTTGAATAGGT+CGG | 0.536108 | 7.3:+5866482 | None:intergenic |
| GAATAGGGGTCCAGATTCCA+TGG | 0.537999 | 7.3:+5865648 | None:intergenic |
| TGCATACAACAGATAACCAT+TGG | 0.538972 | 7.3:+5862971 | None:intergenic |
| GCCAACTTTCTAAACCTGGC+AGG | 0.545096 | 7.3:+5863040 | None:intergenic |
| TGCAAGACACAAAATAATGA+AGG | 0.547606 | 7.3:-5863531 | MS.gene07016:intron |
| GCTTGCCAACTTTCTAAACC+TGG | 0.549616 | 7.3:+5863036 | None:intergenic |
| TATTTCAGGCATGATGGCTG+AGG | 0.552186 | 7.3:-5862659 | MS.gene07016:intron |
| GATACGAGATCACGGGCCTA+AGG | 0.552517 | 7.3:+5869046 | None:intergenic |
| ACTGTTACAAGAGATCTTCT+GGG | 0.552683 | 7.3:-5864849 | MS.gene07016:CDS |
| CACTTCCATTCTTACTCTGA+AGG | 0.552893 | 7.3:+5863199 | None:intergenic |
| TACAACAGATAACCATTGGA+TGG | 0.554913 | 7.3:+5862975 | None:intergenic |
| GCGTACTCTGAGTGCAATGT+TGG | 0.561487 | 7.3:+5865098 | None:intergenic |
| CACTGAAATTGGCAACAAGA+TGG | 0.562829 | 7.3:-5864603 | MS.gene07016:CDS |
| TTTGTACCCATTAGGTTTAG+GGG | 0.564612 | 7.3:+5865477 | None:intergenic |
| ACTTCCAGGGGAAAACTCGC+TGG | 0.564635 | 7.3:+5869204 | None:intergenic |
| AATGGATTTGATAGCTGAGA+GGG | 0.567318 | 7.3:-5865226 | MS.gene07016:CDS |
| GGGTAAGTGGTTACCAGCTG+TGG | 0.569013 | 7.3:+5865783 | None:intergenic |
| GACTTTCTCAGTGATTCTGA+CGG | 0.576627 | 7.3:-5863333 | MS.gene07016:CDS |
| TGCTGGATTACTTCATGACA+CGG | 0.579642 | 7.3:-5868646 | MS.gene07016:CDS |
| GAAATTACCTGTTTATGTGG+AGG | 0.581208 | 7.3:+5868136 | None:intergenic |
| TAAACCAAAGCCGTGCGTTG+GGG | 0.582851 | 7.3:-5865823 | MS.gene07016:CDS |
| TGTTGGCAACATGAGCTCTA+GGG | 0.586013 | 7.3:-5864883 | MS.gene07016:CDS |
| GTCTTTGTATTTACACCCAG+TGG | 0.587156 | 7.3:-5864819 | MS.gene07016:CDS |
| ACTCACCACACAAGAACATA+CGG | 0.588943 | 7.3:+5862606 | None:intergenic |
| TTCCCCTGGAAGTTTGTGGG+AGG | 0.589656 | 7.3:-5869194 | MS.gene07016:intron |
| GCTTGCAAATGCAGAAGTTG+TGG | 0.591891 | 7.3:-5864428 | MS.gene07016:CDS |
| TGTACAGAATAGCATTGCAA+TGG | 0.595760 | 7.3:-5866832 | MS.gene07016:intron |
| GCATTGCAGCTCACTATAGT+GGG | 0.596921 | 7.3:-5865203 | MS.gene07016:CDS |
| AAAGGCCCAACCCCAACGCA+CGG | 0.597406 | 7.3:+5865813 | None:intergenic |
| GTACCTCCCACAAACTTCCA+GGG | 0.597986 | 7.3:+5869191 | None:intergenic |
| TTAGGTTTAATGCAGGTCAA+CGG | 0.603196 | 7.3:-5864475 | MS.gene07016:intron |
| ACATACAGATCTAGGAATAG+GGG | 0.604280 | 7.3:+5865634 | None:intergenic |
| AAGCCCATAAAATTGCCTCA+TGG | 0.605242 | 7.3:-5863017 | MS.gene07016:CDS |
| GGAGGAAGATACGAGATCAC+GGG | 0.606559 | 7.3:+5869039 | None:intergenic |
| TAGAAGGGCATTCCATCCAA+TGG | 0.607450 | 7.3:-5862987 | MS.gene07016:CDS |
| AGGAGGAAGATACGAGATCA+CGG | 0.607622 | 7.3:+5869038 | None:intergenic |
| GTGCATCATGTAAATTTGAA+GGG | 0.610778 | 7.3:-5863138 | MS.gene07016:CDS |
| TGGAAGTGCTTGGACACCCA+AGG | 0.611288 | 7.3:-5863184 | MS.gene07016:CDS |
| CCTCATGGCACAATATAGAA+GGG | 0.612331 | 7.3:-5863002 | MS.gene07016:CDS |
| TAGATTAAGAATCTTCCTCA+AGG | 0.612482 | 7.3:-5864659 | MS.gene07016:CDS |
| AATGTTTCTGGCTATGACAG+AGG | 0.612713 | 7.3:-5868341 | MS.gene07016:CDS |
| TGTATTTACACCCAGTGGAG+AGG | 0.615293 | 7.3:-5864814 | MS.gene07016:intron |
| ACTAACTCCAGTTCTTTAGG+AGG | 0.618244 | 7.3:+5869021 | None:intergenic |
| ATCCCAAGCAACTTTGCCAA+AGG | 0.618298 | 7.3:+5866789 | None:intergenic |
| AAAGGGGACATGATGCTGCA+GGG | 0.620819 | 7.3:-5863114 | MS.gene07016:CDS |
| AAACTCGCTGGCAACGTCCG+AGG | 0.623661 | 7.3:+5869216 | None:intergenic |
| GAAAATATTATTGAACGGTG+TGG | 0.624304 | 7.3:-5863253 | MS.gene07016:CDS |
| TCCACTGTTACCTCTCCACT+GGG | 0.626056 | 7.3:+5864804 | None:intergenic |
| GGCTCAATGCTATTAGAGAG+TGG | 0.627954 | 7.3:-5864917 | MS.gene07016:CDS |
| AGATTTGCTATCATGTTCTG+GGG | 0.632012 | 7.3:-5865676 | MS.gene07016:CDS |
| ACAGTGCGTCACATTGTGGA+AGG | 0.639089 | 7.3:-5868570 | MS.gene07016:CDS |
| TTCTGTAGTGATATCAGCAG+CGG | 0.640815 | 7.3:+5863365 | None:intergenic |
| TGCTACAGTGCGTCACATTG+TGG | 0.642347 | 7.3:-5868574 | MS.gene07016:CDS |
| CTTTCTCAGTGATTCTGACG+GGG | 0.642676 | 7.3:-5863331 | MS.gene07016:CDS |
| TGTAAATTTGAAGGGCAAAG+GGG | 0.645718 | 7.3:-5863130 | MS.gene07016:CDS |
| ACATACGGCTATGTCTGAAG+TGG | 0.647289 | 7.3:+5862621 | None:intergenic |
| AAATCCTGAAGATTATGCAA+AGG | 0.647444 | 7.3:-5866520 | MS.gene07016:CDS |
| AGTAGCTCCAAACATAAAAG+GGG | 0.650201 | 7.3:-5863276 | MS.gene07016:CDS |
| CCCTTCTATATTGTGCCATG+AGG | 0.650407 | 7.3:+5863002 | None:intergenic |
| TCTAGCATTCAAGAACGCCA+TGG | 0.653651 | 7.3:+5862210 | None:intergenic |
| TCAATCACAGTAGCACCTTG+AGG | 0.657313 | 7.3:+5864644 | None:intergenic |
| TCTAGAGTAGATCAAATACC+GGG | 0.659498 | 7.3:-5862281 | MS.gene07016:CDS |
| GTTGTATGCATAGACCGAAG+AGG | 0.660812 | 7.3:-5862958 | MS.gene07016:intron |
| TAGCCAGAAACATTTGCCGA+AGG | 0.661863 | 7.3:+5868350 | None:intergenic |
| GACCAGGCTGAGGTTGATGG+CGG | 0.663709 | 7.3:-5862472 | MS.gene07016:intron |
| GTAGACCATCCCAAAACACC+CGG | 0.672266 | 7.3:+5862263 | None:intergenic |
| TGTTCAAGATGTGAAAGCAG+AGG | 0.675037 | 7.3:-5868374 | MS.gene07016:CDS |
| TACCTCCCACAAACTTCCAG+GGG | 0.676489 | 7.3:+5869192 | None:intergenic |
| GTTTCTGGCTATGACAGAGG+AGG | 0.682217 | 7.3:-5868338 | MS.gene07016:intron |
| CATAGCCGTATGTTCTTGTG+TGG | 0.682854 | 7.3:-5862611 | MS.gene07016:intron |
| AAATGGATTTGATAGCTGAG+AGG | 0.682911 | 7.3:-5865227 | MS.gene07016:CDS |
| CCAACTAGGTGTCAAAGCTG+GGG | 0.684172 | 7.3:-5868426 | MS.gene07016:intron |
| CCAAGCCTGATGGAAAACCA+TGG | 0.686242 | 7.3:-5862227 | MS.gene07016:CDS |
| TCAACCGGATGAATGATGAA+GGG | 0.689425 | 7.3:+5868820 | None:intergenic |
| GTAGCTCCAAACATAAAAGG+GGG | 0.697648 | 7.3:-5863275 | MS.gene07016:CDS |
| GTTGGAAGTGCAGTGCCCAG+TGG | 0.700189 | 7.3:-5865159 | MS.gene07016:CDS |
| GGTTGCAACATGCTAAAACA+CGG | 0.702738 | 7.3:-5863556 | MS.gene07016:CDS |
| TTGGCATTTAAAGCTCACGA+TGG | 0.719107 | 7.3:-5868865 | MS.gene07016:CDS |
| ATGGATTTGATAGCTGAGAG+GGG | 0.725531 | 7.3:-5865225 | MS.gene07016:CDS |
| GATGGTCAGAAAAGACGCAG+CGG | 0.742743 | 7.3:-5868847 | MS.gene07016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5862211 | 5869282 | 5862211 | ID=MS.gene07016 |
| chr7.3 | mRNA | 5862211 | 5869282 | 5862211 | ID=MS.gene07016.t1;Parent=MS.gene07016 |
| chr7.3 | exon | 5869195 | 5869282 | 5869195 | ID=MS.gene07016.t1.exon1;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5869195 | 5869282 | 5869195 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5869005 | 5869070 | 5869005 | ID=MS.gene07016.t1.exon2;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5869005 | 5869070 | 5869005 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5868795 | 5868887 | 5868795 | ID=MS.gene07016.t1.exon3;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5868795 | 5868887 | 5868795 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5868560 | 5868691 | 5868560 | ID=MS.gene07016.t1.exon4;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5868560 | 5868691 | 5868560 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5868339 | 5868440 | 5868339 | ID=MS.gene07016.t1.exon5;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5868339 | 5868440 | 5868339 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5868144 | 5868221 | 5868144 | ID=MS.gene07016.t1.exon6;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5868144 | 5868221 | 5868144 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5866776 | 5866847 | 5866776 | ID=MS.gene07016.t1.exon7;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5866776 | 5866847 | 5866776 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5866467 | 5866574 | 5866467 | ID=MS.gene07016.t1.exon8;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5866467 | 5866574 | 5866467 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5866204 | 5866301 | 5866204 | ID=MS.gene07016.t1.exon9;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5866204 | 5866301 | 5866204 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5865962 | 5866022 | 5865962 | ID=MS.gene07016.t1.exon10;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5865962 | 5866022 | 5865962 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5865797 | 5865859 | 5865797 | ID=MS.gene07016.t1.exon11;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5865797 | 5865859 | 5865797 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5865640 | 5865696 | 5865640 | ID=MS.gene07016.t1.exon12;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5865640 | 5865696 | 5865640 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5865417 | 5865518 | 5865417 | ID=MS.gene07016.t1.exon13;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5865417 | 5865518 | 5865417 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5865104 | 5865262 | 5865104 | ID=MS.gene07016.t1.exon14;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5865104 | 5865262 | 5865104 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5864815 | 5864946 | 5864815 | ID=MS.gene07016.t1.exon15;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5864815 | 5864946 | 5864815 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5864592 | 5864678 | 5864592 | ID=MS.gene07016.t1.exon16;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5864592 | 5864678 | 5864592 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5864411 | 5864482 | 5864411 | ID=MS.gene07016.t1.exon17;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5864411 | 5864482 | 5864411 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5863532 | 5863618 | 5863532 | ID=MS.gene07016.t1.exon18;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5863532 | 5863618 | 5863532 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5862959 | 5863412 | 5862959 | ID=MS.gene07016.t1.exon19;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5862959 | 5863412 | 5862959 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5862612 | 5862673 | 5862612 | ID=MS.gene07016.t1.exon20;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5862612 | 5862673 | 5862612 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5862420 | 5862488 | 5862420 | ID=MS.gene07016.t1.exon21;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5862420 | 5862488 | 5862420 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| chr7.3 | exon | 5862211 | 5862315 | 5862211 | ID=MS.gene07016.t1.exon22;Parent=MS.gene07016.t1 |
| chr7.3 | CDS | 5862211 | 5862315 | 5862211 | ID=cds.MS.gene07016.t1;Parent=MS.gene07016.t1 |
| Gene Sequence |
| Protein sequence |
