Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073417.t1 | XP_013463326.1 | 95.3 | 344 | 15 | 1 | 1 | 344 | 1 | 343 | 1.10E-188 | 669.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073417.t1 | Q9SY33 | 60.7 | 300 | 116 | 2 | 46 | 343 | 47 | 346 | 6.1e-103 | 375.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073417.t1 | A0A072V698 | 95.3 | 344 | 15 | 1 | 1 | 344 | 1 | 343 | 8.0e-189 | 669.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073417.t1 | MTR_2g437770 | 95.349 | 344 | 15 | 1 | 1 | 344 | 1 | 343 | 0.0 | 666 |
MS.gene073417.t1 | MTR_4g133800 | 63.356 | 292 | 107 | 0 | 51 | 342 | 42 | 333 | 3.24e-142 | 406 |
MS.gene073417.t1 | MTR_2g029750 | 45.875 | 303 | 153 | 5 | 50 | 342 | 29 | 330 | 1.18e-82 | 255 |
MS.gene073417.t1 | MTR_5g017860 | 43.854 | 301 | 160 | 3 | 50 | 342 | 27 | 326 | 4.16e-82 | 253 |
MS.gene073417.t1 | MTR_5g021060 | 45.130 | 308 | 159 | 6 | 44 | 342 | 24 | 330 | 1.58e-81 | 251 |
MS.gene073417.t1 | MTR_5g017850 | 42.857 | 301 | 163 | 3 | 50 | 342 | 27 | 326 | 1.66e-81 | 251 |
MS.gene073417.t1 | MTR_2g029740 | 44.816 | 299 | 154 | 5 | 54 | 342 | 33 | 330 | 6.19e-81 | 251 |
MS.gene073417.t1 | MTR_2g028980 | 44.000 | 300 | 157 | 6 | 53 | 342 | 32 | 330 | 2.63e-79 | 246 |
MS.gene073417.t1 | MTR_2g029815 | 39.368 | 348 | 181 | 6 | 6 | 343 | 4 | 331 | 5.24e-79 | 245 |
MS.gene073417.t1 | MTR_8g076820 | 44.667 | 300 | 156 | 6 | 54 | 344 | 34 | 332 | 1.79e-78 | 243 |
MS.gene073417.t1 | MTR_2g029830 | 43.322 | 307 | 163 | 5 | 47 | 343 | 25 | 330 | 4.05e-78 | 243 |
MS.gene073417.t1 | MTR_2g088770 | 44.186 | 301 | 159 | 6 | 50 | 342 | 26 | 325 | 5.57e-78 | 242 |
MS.gene073417.t1 | MTR_4g087965 | 42.857 | 308 | 164 | 4 | 44 | 339 | 36 | 343 | 8.29e-78 | 242 |
MS.gene073417.t1 | MTR_6g027440 | 43.624 | 298 | 159 | 5 | 50 | 342 | 21 | 314 | 2.14e-77 | 240 |
MS.gene073417.t1 | MTR_2g029560 | 42.434 | 304 | 164 | 5 | 50 | 343 | 24 | 326 | 2.23e-77 | 241 |
MS.gene073417.t1 | MTR_2g029800 | 42.345 | 307 | 166 | 5 | 47 | 343 | 26 | 331 | 2.39e-77 | 241 |
MS.gene073417.t1 | MTR_1g086320 | 43.279 | 305 | 160 | 6 | 50 | 342 | 30 | 333 | 7.76e-77 | 239 |
MS.gene073417.t1 | MTR_4g114210 | 43.522 | 301 | 161 | 3 | 50 | 342 | 21 | 320 | 8.07e-77 | 239 |
MS.gene073417.t1 | MTR_2g029730 | 42.763 | 304 | 163 | 5 | 50 | 343 | 25 | 327 | 1.50e-76 | 239 |
MS.gene073417.t1 | MTR_2g029820 | 43.333 | 300 | 159 | 5 | 54 | 343 | 33 | 331 | 2.11e-76 | 239 |
MS.gene073417.t1 | MTR_2g008710 | 41.751 | 297 | 165 | 3 | 53 | 342 | 30 | 325 | 4.80e-76 | 237 |
MS.gene073417.t1 | MTR_1g086490 | 41.667 | 312 | 162 | 6 | 50 | 342 | 30 | 340 | 1.00e-75 | 237 |
MS.gene073417.t1 | MTR_4g046713 | 43.333 | 300 | 157 | 6 | 53 | 342 | 30 | 326 | 1.51e-75 | 236 |
MS.gene073417.t1 | MTR_3g092990 | 42.434 | 304 | 163 | 6 | 50 | 343 | 26 | 327 | 1.54e-75 | 236 |
MS.gene073417.t1 | MTR_7g107520 | 43.919 | 296 | 155 | 6 | 54 | 342 | 29 | 320 | 5.53e-75 | 234 |
MS.gene073417.t1 | MTR_1g054205 | 40.532 | 301 | 167 | 5 | 54 | 343 | 28 | 327 | 6.05e-75 | 234 |
MS.gene073417.t1 | MTR_3g466200 | 42.105 | 304 | 157 | 5 | 50 | 342 | 25 | 320 | 6.29e-75 | 234 |
MS.gene073417.t1 | MTR_2g029850 | 41.456 | 316 | 170 | 6 | 38 | 343 | 21 | 331 | 1.70e-74 | 234 |
MS.gene073417.t1 | MTR_1g077000 | 40.878 | 296 | 165 | 3 | 50 | 342 | 39 | 327 | 1.95e-74 | 233 |
MS.gene073417.t1 | MTR_1g038680 | 42.715 | 302 | 160 | 6 | 53 | 342 | 32 | 332 | 9.20e-74 | 231 |
MS.gene073417.t1 | MTR_3g072190 | 42.222 | 315 | 166 | 7 | 36 | 342 | 12 | 318 | 2.28e-73 | 230 |
MS.gene073417.t1 | MTR_2g084090 | 39.937 | 318 | 174 | 6 | 34 | 342 | 9 | 318 | 3.09e-73 | 229 |
MS.gene073417.t1 | MTR_8g075100 | 40.461 | 304 | 164 | 4 | 48 | 342 | 24 | 319 | 3.44e-73 | 229 |
MS.gene073417.t1 | MTR_7g093370 | 40.328 | 305 | 170 | 6 | 50 | 343 | 69 | 372 | 7.24e-73 | 230 |
MS.gene073417.t1 | MTR_4g031140 | 41.472 | 299 | 163 | 5 | 53 | 343 | 31 | 325 | 2.91e-72 | 228 |
MS.gene073417.t1 | MTR_2g029860 | 41.667 | 300 | 164 | 5 | 54 | 343 | 33 | 331 | 5.48e-72 | 228 |
MS.gene073417.t1 | MTR_1g025980 | 40.984 | 305 | 168 | 4 | 44 | 341 | 18 | 317 | 7.40e-72 | 226 |
MS.gene073417.t1 | MTR_5g074970 | 39.672 | 305 | 164 | 5 | 50 | 342 | 30 | 326 | 8.79e-72 | 226 |
MS.gene073417.t1 | MTR_7g086820 | 39.535 | 301 | 166 | 6 | 50 | 342 | 20 | 312 | 2.78e-71 | 224 |
MS.gene073417.t1 | MTR_1g022970 | 42.997 | 307 | 160 | 8 | 50 | 342 | 42 | 347 | 2.85e-71 | 225 |
MS.gene073417.t1 | MTR_5g014100 | 44.805 | 308 | 155 | 7 | 49 | 342 | 25 | 331 | 3.63e-71 | 224 |
MS.gene073417.t1 | MTR_4g125940 | 40.789 | 304 | 169 | 5 | 50 | 343 | 28 | 330 | 5.27e-71 | 224 |
MS.gene073417.t1 | MTR_2g084080 | 40.067 | 297 | 162 | 5 | 54 | 342 | 29 | 317 | 5.46e-71 | 224 |
MS.gene073417.t1 | MTR_2g084110 | 38.608 | 316 | 178 | 5 | 35 | 342 | 10 | 317 | 6.78e-71 | 223 |
MS.gene073417.t1 | MTR_4g083710 | 38.961 | 308 | 169 | 6 | 47 | 342 | 24 | 324 | 3.54e-70 | 222 |
MS.gene073417.t1 | MTR_2g029910 | 40.667 | 300 | 166 | 5 | 54 | 342 | 34 | 332 | 6.90e-70 | 222 |
MS.gene073417.t1 | MTR_3g094650 | 39.048 | 315 | 174 | 5 | 34 | 338 | 12 | 318 | 2.27e-69 | 220 |
MS.gene073417.t1 | MTR_4g029200 | 40.864 | 301 | 162 | 5 | 50 | 342 | 46 | 338 | 2.49e-69 | 220 |
MS.gene073417.t1 | MTR_5g022870 | 39.799 | 299 | 169 | 3 | 50 | 342 | 23 | 316 | 2.90e-69 | 219 |
MS.gene073417.t1 | MTR_4g029190 | 41.806 | 299 | 156 | 5 | 54 | 342 | 50 | 340 | 2.92e-69 | 220 |
MS.gene073417.t1 | MTR_7g026990 | 40.741 | 297 | 161 | 5 | 54 | 343 | 35 | 323 | 5.09e-69 | 219 |
MS.gene073417.t1 | MTR_4g122640 | 38.150 | 346 | 193 | 8 | 6 | 342 | 3 | 336 | 8.27e-69 | 219 |
MS.gene073417.t1 | MTR_1g115900 | 39.803 | 304 | 165 | 6 | 50 | 343 | 27 | 322 | 8.63e-69 | 218 |
MS.gene073417.t1 | MTR_8g062780 | 39.667 | 300 | 168 | 6 | 54 | 342 | 27 | 324 | 1.67e-68 | 218 |
MS.gene073417.t1 | MTR_4g074995 | 38.436 | 307 | 159 | 6 | 47 | 342 | 21 | 308 | 2.51e-68 | 216 |
MS.gene073417.t1 | MTR_4g030890 | 40.268 | 298 | 166 | 6 | 53 | 342 | 103 | 396 | 3.37e-68 | 219 |
MS.gene073417.t1 | MTR_4g029170 | 42.574 | 303 | 156 | 7 | 50 | 342 | 27 | 321 | 3.93e-68 | 216 |
MS.gene073417.t1 | MTR_2g084000 | 39.735 | 302 | 165 | 7 | 50 | 342 | 26 | 319 | 5.58e-68 | 216 |
MS.gene073417.t1 | MTR_4g127670 | 37.710 | 297 | 176 | 5 | 50 | 338 | 24 | 319 | 6.07e-68 | 216 |
MS.gene073417.t1 | MTR_2g040000 | 40.864 | 301 | 166 | 5 | 54 | 343 | 33 | 332 | 7.63e-68 | 216 |
MS.gene073417.t1 | MTR_7g072510 | 37.874 | 301 | 171 | 5 | 50 | 342 | 20 | 312 | 9.65e-68 | 215 |
MS.gene073417.t1 | MTR_7g086870 | 39.404 | 302 | 164 | 6 | 50 | 343 | 22 | 312 | 1.25e-67 | 215 |
MS.gene073417.t1 | MTR_2g084010 | 38.365 | 318 | 177 | 7 | 35 | 342 | 10 | 318 | 1.41e-67 | 215 |
MS.gene073417.t1 | MTR_3g094670 | 40.803 | 299 | 159 | 5 | 50 | 338 | 28 | 318 | 1.61e-67 | 215 |
MS.gene073417.t1 | MTR_1g066380 | 39.803 | 304 | 167 | 5 | 50 | 343 | 27 | 324 | 3.31e-67 | 214 |
MS.gene073417.t1 | MTR_1g101830 | 39.262 | 298 | 166 | 4 | 54 | 342 | 31 | 322 | 4.71e-67 | 214 |
MS.gene073417.t1 | MTR_1g090760 | 37.829 | 304 | 177 | 5 | 50 | 342 | 28 | 330 | 7.74e-67 | 214 |
MS.gene073417.t1 | MTR_7g072480 | 38.538 | 301 | 169 | 5 | 50 | 342 | 24 | 316 | 2.22e-66 | 212 |
MS.gene073417.t1 | MTR_5g016010 | 37.954 | 303 | 176 | 6 | 50 | 341 | 27 | 328 | 2.73e-66 | 212 |
MS.gene073417.t1 | MTR_5g083860 | 40.594 | 303 | 162 | 6 | 50 | 342 | 31 | 325 | 3.65e-66 | 211 |
MS.gene073417.t1 | MTR_1g066710 | 39.474 | 304 | 168 | 5 | 50 | 343 | 27 | 324 | 4.67e-66 | 211 |
MS.gene073417.t1 | MTR_6g043280 | 37.124 | 299 | 175 | 4 | 50 | 342 | 41 | 332 | 3.17e-65 | 209 |
MS.gene073417.t1 | MTR_0155s0040 | 37.374 | 297 | 174 | 5 | 50 | 342 | 27 | 315 | 4.34e-65 | 208 |
MS.gene073417.t1 | MTR_1g009750 | 36.964 | 303 | 180 | 6 | 50 | 342 | 27 | 328 | 4.57e-65 | 209 |
MS.gene073417.t1 | MTR_2g084020 | 36.909 | 317 | 183 | 6 | 35 | 342 | 10 | 318 | 9.03e-65 | 208 |
MS.gene073417.t1 | MTR_4g125940 | 42.336 | 274 | 147 | 5 | 80 | 343 | 3 | 275 | 9.45e-65 | 206 |
MS.gene073417.t1 | MTR_6g043240 | 38.591 | 298 | 172 | 4 | 50 | 343 | 42 | 332 | 1.14e-64 | 209 |
MS.gene073417.t1 | MTR_0286s0010 | 38.033 | 305 | 173 | 8 | 50 | 342 | 34 | 334 | 2.26e-64 | 207 |
MS.gene073417.t1 | MTR_6g008075 | 38.033 | 305 | 173 | 8 | 50 | 342 | 34 | 334 | 2.26e-64 | 207 |
MS.gene073417.t1 | MTR_6g043460 | 38.514 | 296 | 168 | 5 | 50 | 338 | 36 | 324 | 2.32e-64 | 207 |
MS.gene073417.t1 | MTR_3g092990 | 40.132 | 304 | 159 | 7 | 50 | 343 | 26 | 316 | 2.61e-64 | 206 |
MS.gene073417.t1 | MTR_1g066640 | 38.487 | 304 | 171 | 5 | 50 | 343 | 27 | 324 | 3.68e-64 | 206 |
MS.gene073417.t1 | MTR_3g466180 | 41.528 | 301 | 160 | 5 | 50 | 342 | 31 | 323 | 6.21e-64 | 206 |
MS.gene073417.t1 | MTR_5g049280 | 38.889 | 306 | 173 | 6 | 50 | 342 | 33 | 337 | 1.85e-63 | 205 |
MS.gene073417.t1 | MTR_2g067440 | 36.280 | 328 | 172 | 6 | 50 | 341 | 60 | 386 | 3.46e-63 | 206 |
MS.gene073417.t1 | MTR_4g074990 | 37.419 | 310 | 161 | 7 | 44 | 342 | 18 | 305 | 6.61e-63 | 202 |
MS.gene073417.t1 | MTR_2g029830 | 42.857 | 259 | 137 | 5 | 95 | 343 | 5 | 262 | 8.39e-63 | 202 |
MS.gene073417.t1 | MTR_2g008160 | 40.066 | 302 | 170 | 5 | 50 | 342 | 24 | 323 | 8.65e-63 | 203 |
MS.gene073417.t1 | MTR_2g078610 | 36.170 | 329 | 170 | 6 | 50 | 339 | 76 | 403 | 1.83e-62 | 204 |
MS.gene073417.t1 | MTR_3g094630 | 40.264 | 303 | 163 | 6 | 50 | 342 | 28 | 322 | 2.38e-62 | 202 |
MS.gene073417.t1 | MTR_4g029180 | 41.137 | 299 | 158 | 7 | 54 | 342 | 31 | 321 | 5.07e-62 | 201 |
MS.gene073417.t1 | MTR_2g077990 | 36.280 | 328 | 169 | 6 | 50 | 338 | 76 | 402 | 7.55e-62 | 203 |
MS.gene073417.t1 | MTR_4g132110 | 36.928 | 306 | 177 | 5 | 47 | 342 | 29 | 328 | 1.65e-60 | 197 |
MS.gene073417.t1 | MTR_5g074710 | 40.984 | 305 | 160 | 9 | 50 | 342 | 25 | 321 | 1.83e-60 | 197 |
MS.gene073417.t1 | MTR_3g467600 | 41.060 | 302 | 157 | 10 | 54 | 342 | 31 | 324 | 4.08e-60 | 196 |
MS.gene073417.t1 | MTR_5g033470 | 37.134 | 307 | 177 | 6 | 50 | 342 | 73 | 377 | 8.62e-60 | 197 |
MS.gene073417.t1 | MTR_1g066680 | 39.145 | 304 | 168 | 7 | 50 | 343 | 27 | 323 | 3.27e-59 | 194 |
MS.gene073417.t1 | MTR_2g078280 | 36.278 | 317 | 163 | 5 | 50 | 327 | 76 | 392 | 1.03e-58 | 194 |
MS.gene073417.t1 | MTR_4g132490 | 36.721 | 305 | 179 | 6 | 48 | 342 | 27 | 327 | 1.05e-58 | 192 |
MS.gene073417.t1 | MTR_4g132110 | 36.334 | 311 | 177 | 6 | 47 | 342 | 29 | 333 | 1.75e-58 | 192 |
MS.gene073417.t1 | MTR_5g074760 | 40.328 | 305 | 162 | 9 | 50 | 342 | 25 | 321 | 2.43e-58 | 191 |
MS.gene073417.t1 | MTR_4g074980 | 35.556 | 315 | 170 | 8 | 33 | 342 | 8 | 294 | 3.70e-58 | 190 |
MS.gene073417.t1 | MTR_4g095450 | 35.333 | 300 | 177 | 6 | 50 | 338 | 27 | 320 | 5.86e-58 | 190 |
MS.gene073417.t1 | MTR_5g074740 | 40.000 | 305 | 163 | 9 | 50 | 342 | 25 | 321 | 7.25e-57 | 187 |
MS.gene073417.t1 | MTR_2g008730 | 37.037 | 297 | 155 | 4 | 53 | 342 | 30 | 301 | 1.02e-56 | 186 |
MS.gene073417.t1 | MTR_2g099175 | 38.944 | 303 | 172 | 5 | 50 | 342 | 36 | 335 | 1.29e-56 | 187 |
MS.gene073417.t1 | MTR_3g072190 | 42.023 | 257 | 133 | 7 | 94 | 342 | 3 | 251 | 1.51e-56 | 184 |
MS.gene073417.t1 | MTR_7g029030 | 36.027 | 297 | 177 | 5 | 54 | 342 | 29 | 320 | 1.98e-55 | 184 |
MS.gene073417.t1 | MTR_5g074860 | 38.033 | 305 | 169 | 8 | 49 | 341 | 28 | 324 | 3.63e-55 | 183 |
MS.gene073417.t1 | MTR_1g009750 | 33.887 | 301 | 175 | 7 | 50 | 342 | 27 | 311 | 1.08e-54 | 181 |
MS.gene073417.t1 | MTR_4g074980 | 37.302 | 252 | 141 | 5 | 33 | 273 | 8 | 253 | 1.80e-54 | 179 |
MS.gene073417.t1 | MTR_1g066380 | 39.080 | 261 | 143 | 5 | 93 | 343 | 2 | 256 | 2.88e-54 | 179 |
MS.gene073417.t1 | MTR_2g067450 | 34.304 | 309 | 176 | 8 | 50 | 341 | 11 | 309 | 7.94e-52 | 174 |
MS.gene073417.t1 | MTR_0147s0010 | 33.754 | 317 | 175 | 6 | 49 | 341 | 76 | 381 | 2.11e-49 | 170 |
MS.gene073417.t1 | MTR_3g105790 | 36.455 | 299 | 183 | 5 | 50 | 342 | 25 | 322 | 1.12e-48 | 166 |
MS.gene073417.t1 | MTR_2g008160 | 36.755 | 302 | 145 | 7 | 50 | 342 | 24 | 288 | 3.52e-48 | 164 |
MS.gene073417.t1 | MTR_2g008160 | 48.193 | 166 | 85 | 1 | 50 | 214 | 24 | 189 | 3.31e-45 | 154 |
MS.gene073417.t1 | MTR_2g029880 | 42.021 | 188 | 98 | 4 | 158 | 342 | 9 | 188 | 2.29e-39 | 139 |
MS.gene073417.t1 | MTR_5g074860 | 33.663 | 303 | 146 | 10 | 49 | 341 | 28 | 285 | 7.38e-37 | 134 |
MS.gene073417.t1 | MTR_5g074700 | 37.607 | 234 | 118 | 9 | 116 | 342 | 2 | 214 | 5.14e-34 | 125 |
MS.gene073417.t1 | MTR_3g072260 | 47.154 | 123 | 61 | 1 | 36 | 154 | 12 | 134 | 7.19e-32 | 117 |
MS.gene073417.t1 | MTR_3g105790 | 35.887 | 248 | 150 | 6 | 102 | 342 | 1 | 246 | 7.66e-32 | 120 |
MS.gene073417.t1 | MTR_7g072490 | 33.621 | 232 | 89 | 6 | 96 | 321 | 2 | 174 | 1.48e-28 | 110 |
MS.gene073417.t1 | MTR_2g078560 | 31.696 | 224 | 117 | 5 | 151 | 339 | 95 | 317 | 3.38e-27 | 109 |
MS.gene073417.t1 | MTR_3g072210 | 38.144 | 194 | 106 | 8 | 155 | 342 | 53 | 238 | 2.55e-26 | 105 |
MS.gene073417.t1 | MTR_7g086790 | 35.625 | 160 | 80 | 5 | 97 | 252 | 17 | 157 | 4.94e-22 | 92.4 |
MS.gene073417.t1 | MTR_5g058120 | 34.375 | 160 | 92 | 3 | 181 | 338 | 7 | 155 | 1.01e-20 | 90.5 |
MS.gene073417.t1 | MTR_4g114220 | 49.412 | 85 | 37 | 1 | 69 | 153 | 22 | 100 | 3.23e-20 | 85.9 |
MS.gene073417.t1 | MTR_1g089005 | 38.983 | 118 | 63 | 2 | 49 | 157 | 14 | 131 | 1.24e-19 | 84.7 |
MS.gene073417.t1 | MTR_6g048160 | 53.030 | 66 | 31 | 0 | 89 | 154 | 22 | 87 | 2.49e-19 | 82.0 |
MS.gene073417.t1 | MTR_7g086810 | 36.522 | 115 | 51 | 1 | 50 | 164 | 6 | 98 | 2.46e-16 | 77.8 |
MS.gene073417.t1 | MTR_7g086785 | 34.058 | 138 | 82 | 3 | 95 | 228 | 3 | 135 | 5.06e-16 | 74.3 |
MS.gene073417.t1 | MTR_1g098320 | 45.570 | 79 | 42 | 1 | 264 | 342 | 47 | 124 | 1.32e-15 | 73.2 |
MS.gene073417.t1 | MTR_4g031040 | 33.846 | 130 | 65 | 4 | 155 | 280 | 24 | 136 | 1.05e-14 | 70.5 |
MS.gene073417.t1 | MTR_3g462850 | 35.211 | 142 | 83 | 4 | 209 | 342 | 9 | 149 | 1.40e-12 | 65.1 |
MS.gene073417.t1 | MTR_4g012865 | 43.284 | 67 | 35 | 1 | 49 | 112 | 76 | 142 | 9.43e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073417.t1 | AT1G30870 | 60.667 | 300 | 116 | 2 | 46 | 343 | 47 | 346 | 4.10e-133 | 383 |
MS.gene073417.t1 | AT3G03670 | 42.667 | 300 | 164 | 4 | 50 | 342 | 23 | 321 | 7.90e-88 | 267 |
MS.gene073417.t1 | AT5G17820 | 41.638 | 293 | 168 | 3 | 50 | 342 | 24 | 313 | 1.01e-86 | 264 |
MS.gene073417.t1 | AT5G17820 | 41.638 | 293 | 168 | 3 | 50 | 342 | 77 | 366 | 4.12e-85 | 261 |
MS.gene073417.t1 | AT1G49570 | 45.033 | 302 | 154 | 6 | 50 | 340 | 48 | 348 | 1.27e-84 | 260 |
MS.gene073417.t1 | AT2G18150 | 43.478 | 299 | 159 | 6 | 53 | 342 | 39 | 336 | 3.40e-82 | 253 |
MS.gene073417.t1 | AT4G36430 | 44.333 | 300 | 157 | 7 | 53 | 343 | 33 | 331 | 4.36e-82 | 253 |
MS.gene073417.t1 | AT1G05240 | 42.904 | 303 | 162 | 6 | 49 | 342 | 25 | 325 | 5.18e-82 | 252 |
MS.gene073417.t1 | AT1G05250 | 42.904 | 303 | 162 | 6 | 49 | 342 | 25 | 325 | 5.18e-82 | 252 |
MS.gene073417.t1 | AT5G15180 | 45.819 | 299 | 155 | 5 | 50 | 342 | 32 | 329 | 7.15e-81 | 249 |
MS.gene073417.t1 | AT2G18140 | 42.994 | 314 | 160 | 7 | 47 | 342 | 23 | 335 | 8.76e-80 | 247 |
MS.gene073417.t1 | AT2G41480 | 43.564 | 303 | 162 | 3 | 48 | 342 | 27 | 328 | 3.00e-79 | 245 |
MS.gene073417.t1 | AT4G11290 | 44.590 | 305 | 154 | 7 | 50 | 342 | 25 | 326 | 5.28e-79 | 244 |
MS.gene073417.t1 | AT5G64120 | 41.497 | 294 | 167 | 3 | 52 | 342 | 37 | 328 | 1.44e-78 | 244 |
MS.gene073417.t1 | AT3G01190 | 45.485 | 299 | 154 | 6 | 50 | 342 | 26 | 321 | 2.27e-78 | 243 |
MS.gene073417.t1 | AT1G05260 | 44.040 | 302 | 160 | 6 | 50 | 343 | 26 | 326 | 3.66e-78 | 243 |
MS.gene073417.t1 | AT2G39040 | 43.791 | 306 | 158 | 6 | 50 | 342 | 46 | 350 | 1.73e-77 | 241 |
MS.gene073417.t1 | AT2G38390 | 43.667 | 300 | 157 | 6 | 54 | 342 | 35 | 333 | 2.54e-77 | 241 |
MS.gene073417.t1 | AT5G66390 | 43.624 | 298 | 158 | 6 | 54 | 342 | 37 | 333 | 5.96e-77 | 239 |
MS.gene073417.t1 | AT3G21770 | 43.434 | 297 | 159 | 6 | 50 | 338 | 29 | 324 | 7.60e-77 | 239 |
MS.gene073417.t1 | AT4G08770 | 43.137 | 306 | 161 | 7 | 50 | 343 | 24 | 328 | 1.87e-76 | 239 |
MS.gene073417.t1 | AT4G16270 | 44.300 | 307 | 157 | 7 | 46 | 342 | 46 | 348 | 2.79e-75 | 236 |
MS.gene073417.t1 | AT3G50990 | 42.384 | 302 | 164 | 6 | 50 | 342 | 41 | 341 | 3.32e-75 | 236 |
MS.gene073417.t1 | AT4G08780 | 42.810 | 306 | 162 | 7 | 50 | 343 | 24 | 328 | 5.24e-75 | 235 |
MS.gene073417.t1 | AT5G06720 | 39.667 | 300 | 170 | 5 | 54 | 343 | 36 | 334 | 6.15e-75 | 234 |
MS.gene073417.t1 | AT5G19880 | 40.850 | 306 | 167 | 6 | 50 | 342 | 25 | 329 | 1.36e-74 | 233 |
MS.gene073417.t1 | AT5G64100 | 41.497 | 294 | 166 | 5 | 53 | 342 | 40 | 331 | 1.44e-74 | 233 |
MS.gene073417.t1 | AT5G06730 | 39.667 | 300 | 170 | 6 | 54 | 343 | 37 | 335 | 2.78e-74 | 234 |
MS.gene073417.t1 | AT2G34060 | 44.371 | 302 | 156 | 5 | 50 | 339 | 42 | 343 | 4.59e-74 | 233 |
MS.gene073417.t1 | AT2G38380 | 43.667 | 300 | 157 | 6 | 54 | 342 | 35 | 333 | 4.96e-74 | 233 |
MS.gene073417.t1 | AT5G19890 | 41.528 | 301 | 165 | 4 | 50 | 342 | 30 | 327 | 1.03e-73 | 231 |
MS.gene073417.t1 | AT3G49110 | 41.424 | 309 | 168 | 7 | 47 | 343 | 30 | 337 | 1.60e-72 | 229 |
MS.gene073417.t1 | AT3G32980 | 42.715 | 302 | 160 | 6 | 54 | 343 | 35 | 335 | 2.65e-72 | 228 |
MS.gene073417.t1 | AT3G49120 | 41.060 | 302 | 165 | 6 | 54 | 343 | 36 | 336 | 3.21e-72 | 228 |
MS.gene073417.t1 | AT5G05340 | 38.944 | 303 | 167 | 5 | 50 | 342 | 30 | 324 | 1.51e-71 | 225 |
MS.gene073417.t1 | AT4G33420 | 41.216 | 296 | 164 | 3 | 50 | 342 | 37 | 325 | 2.52e-71 | 225 |
MS.gene073417.t1 | AT2G22420 | 41.751 | 297 | 161 | 6 | 54 | 342 | 27 | 319 | 4.86e-71 | 224 |
MS.gene073417.t1 | AT4G33420 | 41.216 | 296 | 164 | 3 | 50 | 342 | 84 | 372 | 1.44e-70 | 224 |
MS.gene073417.t1 | AT1G44970 | 42.475 | 299 | 161 | 6 | 54 | 342 | 49 | 346 | 1.49e-70 | 224 |
MS.gene073417.t1 | AT5G39580 | 40.000 | 295 | 171 | 4 | 52 | 342 | 27 | 319 | 3.41e-70 | 222 |
MS.gene073417.t1 | AT5G42180 | 36.416 | 346 | 182 | 6 | 3 | 341 | 2 | 316 | 1.95e-69 | 220 |
MS.gene073417.t1 | AT1G71695 | 39.375 | 320 | 171 | 8 | 39 | 342 | 27 | 339 | 3.68e-69 | 220 |
MS.gene073417.t1 | AT5G64110 | 40.741 | 297 | 166 | 5 | 53 | 342 | 37 | 330 | 5.68e-69 | 219 |
MS.gene073417.t1 | AT1G68850 | 40.065 | 307 | 169 | 6 | 50 | 342 | 30 | 335 | 6.34e-69 | 219 |
MS.gene073417.t1 | AT5G51890 | 40.000 | 300 | 162 | 5 | 54 | 342 | 30 | 322 | 3.56e-68 | 217 |
MS.gene073417.t1 | AT4G30170 | 36.545 | 301 | 181 | 6 | 50 | 342 | 27 | 325 | 1.61e-67 | 215 |
MS.gene073417.t1 | AT1G14550 | 42.295 | 305 | 155 | 8 | 50 | 342 | 26 | 321 | 5.40e-67 | 214 |
MS.gene073417.t1 | AT2G18980 | 37.874 | 301 | 177 | 6 | 50 | 342 | 25 | 323 | 9.19e-67 | 213 |
MS.gene073417.t1 | AT2G35380 | 41.447 | 304 | 163 | 8 | 53 | 342 | 33 | 335 | 3.55e-66 | 212 |
MS.gene073417.t1 | AT4G25980 | 39.735 | 302 | 172 | 4 | 50 | 342 | 26 | 326 | 1.24e-65 | 210 |
MS.gene073417.t1 | AT2G24800 | 41.528 | 301 | 166 | 5 | 50 | 342 | 31 | 329 | 1.73e-65 | 210 |
MS.gene073417.t1 | AT5G22410 | 38.851 | 296 | 172 | 5 | 50 | 338 | 28 | 321 | 3.21e-65 | 209 |
MS.gene073417.t1 | AT4G17690 | 37.124 | 299 | 172 | 6 | 54 | 342 | 30 | 322 | 4.24e-65 | 209 |
MS.gene073417.t1 | AT1G77100 | 39.604 | 303 | 166 | 7 | 50 | 342 | 24 | 319 | 9.03e-65 | 208 |
MS.gene073417.t1 | AT3G49960 | 36.184 | 304 | 182 | 5 | 50 | 342 | 27 | 329 | 1.70e-64 | 207 |
MS.gene073417.t1 | AT5G40150 | 38.284 | 303 | 171 | 6 | 50 | 342 | 32 | 328 | 4.88e-64 | 206 |
MS.gene073417.t1 | AT4G26010 | 37.919 | 298 | 170 | 6 | 50 | 342 | 22 | 309 | 1.19e-63 | 205 |
MS.gene073417.t1 | AT5G47000 | 37.582 | 306 | 172 | 7 | 49 | 342 | 32 | 330 | 1.99e-63 | 205 |
MS.gene073417.t1 | AT4G26010 | 37.919 | 298 | 170 | 6 | 50 | 342 | 50 | 337 | 2.25e-63 | 205 |
MS.gene073417.t1 | AT4G31760 | 39.404 | 302 | 170 | 5 | 50 | 342 | 29 | 326 | 2.77e-63 | 204 |
MS.gene073417.t1 | AT3G28200 | 37.624 | 303 | 172 | 6 | 50 | 342 | 21 | 316 | 3.94e-63 | 204 |
MS.gene073417.t1 | AT1G14540 | 39.073 | 302 | 168 | 7 | 50 | 342 | 21 | 315 | 5.69e-63 | 203 |
MS.gene073417.t1 | AT5G58390 | 38.851 | 296 | 162 | 5 | 54 | 338 | 25 | 312 | 7.42e-63 | 203 |
MS.gene073417.t1 | AT5G24070 | 37.171 | 304 | 179 | 4 | 50 | 343 | 35 | 336 | 1.31e-62 | 203 |
MS.gene073417.t1 | AT5G14130 | 37.000 | 300 | 181 | 5 | 50 | 342 | 32 | 330 | 1.32e-62 | 202 |
MS.gene073417.t1 | AT5G14130 | 37.000 | 300 | 181 | 5 | 50 | 342 | 73 | 371 | 7.39e-62 | 202 |
MS.gene073417.t1 | AT5G58400 | 36.061 | 330 | 191 | 6 | 25 | 342 | 4 | 325 | 1.82e-61 | 199 |
MS.gene073417.t1 | AT2G37130 | 38.158 | 304 | 171 | 6 | 50 | 342 | 30 | 327 | 2.18e-61 | 199 |
MS.gene073417.t1 | AT2G37130 | 38.079 | 302 | 170 | 6 | 52 | 342 | 1 | 296 | 4.02e-61 | 197 |
MS.gene073417.t1 | AT2G43480 | 35.604 | 323 | 190 | 5 | 30 | 342 | 21 | 335 | 1.48e-60 | 197 |
MS.gene073417.t1 | AT4G33870 | 31.781 | 365 | 199 | 7 | 17 | 339 | 42 | 398 | 5.09e-60 | 198 |
MS.gene073417.t1 | AT4G37530 | 34.333 | 300 | 185 | 5 | 54 | 342 | 31 | 329 | 1.84e-59 | 194 |
MS.gene073417.t1 | AT5G67400 | 34.375 | 320 | 197 | 6 | 34 | 342 | 12 | 329 | 2.20e-59 | 194 |
MS.gene073417.t1 | AT4G37520 | 34.539 | 304 | 187 | 6 | 50 | 342 | 27 | 329 | 2.42e-59 | 194 |
MS.gene073417.t1 | AT4G37520 | 34.539 | 304 | 184 | 7 | 50 | 342 | 27 | 326 | 2.68e-58 | 191 |
MS.gene073417.t1 | AT4G21960 | 36.246 | 309 | 181 | 5 | 44 | 342 | 25 | 327 | 8.44e-58 | 190 |
MS.gene073417.t1 | AT1G34510 | 38.255 | 298 | 169 | 6 | 50 | 342 | 22 | 309 | 2.35e-57 | 188 |
MS.gene073417.t1 | AT1G24110 | 39.542 | 306 | 171 | 7 | 50 | 344 | 22 | 324 | 4.29e-57 | 188 |
MS.gene073417.t1 | AT3G17070 | 36.482 | 307 | 176 | 7 | 50 | 342 | 38 | 339 | 9.58e-56 | 185 |
MS.gene073417.t1 | AT4G37530 | 34.127 | 252 | 155 | 4 | 54 | 294 | 31 | 282 | 3.10e-50 | 169 |
MS.gene073417.t1 | AT2G35380 | 40.506 | 237 | 130 | 6 | 116 | 342 | 12 | 247 | 1.83e-46 | 158 |
MS.gene073417.t1 | AT2G24800 | 45.679 | 162 | 87 | 1 | 50 | 210 | 31 | 192 | 7.91e-42 | 146 |
MS.gene073417.t1 | AT4G25980 | 45.732 | 164 | 88 | 1 | 50 | 212 | 71 | 234 | 1.16e-41 | 147 |
MS.gene073417.t1 | AT5G39580 | 41.071 | 168 | 99 | 0 | 52 | 219 | 27 | 194 | 1.04e-40 | 143 |
MS.gene073417.t1 | AT3G17070 | 34.483 | 261 | 152 | 7 | 96 | 342 | 21 | 276 | 1.35e-38 | 139 |
Find 66 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAAGAAGTTAAGGTATTT+TGG | 0.131323 | 2.4:+54080190 | None:intergenic |
CCTCCGATTGTTGCTTCTTT+TGG | 0.213392 | 2.4:-54081629 | MS.gene073417:CDS |
ACTTCCATGATTGCTCTGTT+AGG | 0.266056 | 2.4:-54081381 | MS.gene073417:CDS |
TGAAGTTATTGATGATATTA+AGG | 0.280197 | 2.4:-54080713 | MS.gene073417:CDS |
CCATATTGGTCAGTCCCTTA+TGG | 0.281860 | 2.4:-54080601 | MS.gene073417:CDS |
GGTGTCATTGATGTTCTTAC+TGG | 0.290141 | 2.4:-54079950 | MS.gene073417:CDS |
AACATTAGAGGATACAGATT+TGG | 0.336587 | 2.4:-54081527 | MS.gene073417:CDS |
TATTCAGGGGCACATACTAT+TGG | 0.363846 | 2.4:-54080289 | MS.gene073417:intron |
TCTTGCAAAGAAAATGTAGA+TGG | 0.363928 | 2.4:-54080174 | MS.gene073417:CDS |
TTGGATAATCTCTTATCCTT+TGG | 0.369990 | 2.4:-54081508 | MS.gene073417:CDS |
TCTACAAGTCCCAACATTAG+AGG | 0.388107 | 2.4:-54081539 | MS.gene073417:CDS |
GCTGTTTCAATGTCAAAGTT+TGG | 0.390316 | 2.4:-54079971 | MS.gene073417:CDS |
TTTCCATCTTTCCTCCCATA+AGG | 0.401746 | 2.4:+54080586 | None:intergenic |
TTCCATCTTTCCTCCCATAA+GGG | 0.402901 | 2.4:+54080587 | None:intergenic |
TTTGGATCTAATGATGGGTC+TGG | 0.404975 | 2.4:+54080208 | None:intergenic |
CTTGACTTAGTTGTTCTCTC+AGG | 0.406767 | 2.4:-54080469 | MS.gene073417:intron |
CATATTGGTCAGTCCCTTAT+GGG | 0.409021 | 2.4:-54080600 | MS.gene073417:CDS |
AGCATTGACAAAATTGCAAT+TGG | 0.413153 | 2.4:+54079904 | None:intergenic |
GTCAAGGACAGTCAAGCCTT+TGG | 0.419581 | 2.4:+54080486 | None:intergenic |
TATTGACAAAGAAGCTGAAA+TGG | 0.421889 | 2.4:-54080557 | MS.gene073417:CDS |
ATATTCTTACAACTGCTTCA+AGG | 0.425738 | 2.4:-54080648 | MS.gene073417:CDS |
GAAACAAGTGGAGAAGTTCT+TGG | 0.427170 | 2.4:+54080034 | None:intergenic |
CTTCCATGATTGCTCTGTTA+GGG | 0.430268 | 2.4:-54081380 | MS.gene073417:intron |
CCATAAGGGACTGACCAATA+TGG | 0.445922 | 2.4:+54080601 | None:intergenic |
TTCTCCACTTGTTTCAGCAT+TGG | 0.449242 | 2.4:-54080026 | MS.gene073417:CDS |
GGTCTGGTTTGCCTGTTCCT+TGG | 0.453569 | 2.4:+54080224 | None:intergenic |
CCACCCTAACAGAGCAATCA+TGG | 0.454699 | 2.4:+54081377 | None:intergenic |
CTTGTGGCTCTATTCAATAC+AGG | 0.457006 | 2.4:-54080258 | MS.gene073417:CDS |
AGGGATGCCACTGTTGAGTT+GGG | 0.457543 | 2.4:-54080628 | MS.gene073417:CDS |
GTCCCTTATGGGAGGAAAGA+TGG | 0.458270 | 2.4:-54080589 | MS.gene073417:CDS |
AAATCTGTATCCTCTAATGT+TGG | 0.458659 | 2.4:+54081529 | None:intergenic |
TTTGACTTTGCTATGCAAGA+TGG | 0.467791 | 2.4:+54081453 | None:intergenic |
TGCATAGCAAAGTCAAAGAA+TGG | 0.476889 | 2.4:-54081447 | MS.gene073417:CDS |
AAGGGATGCCACTGTTGAGT+TGG | 0.488094 | 2.4:-54080629 | MS.gene073417:CDS |
AATCTGTATCCTCTAATGTT+GGG | 0.489759 | 2.4:+54081530 | None:intergenic |
TGCAAGATGGATTCAAATTG+AGG | 0.491467 | 2.4:+54081466 | None:intergenic |
TTGAGTTGGGTGGACCATAT+TGG | 0.502726 | 2.4:-54080615 | MS.gene073417:CDS |
AATCATGGAAGTGCAACCTT+AGG | 0.505171 | 2.4:+54081392 | None:intergenic |
TTATACAACTACCAAGGAAC+AGG | 0.505330 | 2.4:-54080235 | MS.gene073417:CDS |
TATTCTTACAACTGCTTCAA+GGG | 0.505713 | 2.4:-54080647 | MS.gene073417:CDS |
CTTTAGCAGCTAGTCTCCTA+AGG | 0.506408 | 2.4:-54081408 | MS.gene073417:CDS |
AGAAGCTGAAATGGTACCAA+TGG | 0.515929 | 2.4:-54080548 | MS.gene073417:CDS |
GGATTGAAAATATTCGATCA+AGG | 0.518413 | 2.4:+54080507 | None:intergenic |
GAGATGATGAAGGAGAAATC+AGG | 0.533880 | 2.4:-54079928 | MS.gene073417:CDS |
GAAGCTGAAATGGTACCAAT+GGG | 0.535263 | 2.4:-54080547 | MS.gene073417:CDS |
GAACCAAAAGAAGCAACAAT+CGG | 0.537109 | 2.4:+54081626 | None:intergenic |
GCAAGATGGATTCAAATTGA+GGG | 0.538287 | 2.4:+54081467 | None:intergenic |
ACCTTATGATGAAAACTATG+AGG | 0.539825 | 2.4:-54081575 | MS.gene073417:CDS |
TAGATGGGCCACAGAATATG+TGG | 0.542434 | 2.4:-54080158 | MS.gene073417:CDS |
AGTCAAAGAATGGATTAAGA+AGG | 0.547241 | 2.4:-54081437 | MS.gene073417:CDS |
GTAATGTTCTCATGGCCCAT+TGG | 0.578787 | 2.4:+54080532 | None:intergenic |
TCAAGGAAGTAATGTTCTCA+TGG | 0.582299 | 2.4:+54080524 | None:intergenic |
CTTGCAAAGAAAATGTAGAT+GGG | 0.598148 | 2.4:-54080173 | MS.gene073417:CDS |
CAAGTAAGCAAGACATTGAG+AGG | 0.601262 | 2.4:-54080739 | MS.gene073417:CDS |
TGAATCATGAAGGAAGTGAA+AGG | 0.602756 | 2.4:-54080768 | MS.gene073417:CDS |
GTTCTTACTGGAGATGATGA+AGG | 0.609230 | 2.4:-54079938 | MS.gene073417:CDS |
CAGGGGCACATACTATTGGA+AGG | 0.617965 | 2.4:-54080285 | MS.gene073417:CDS |
CTGAGAGAACAACTAAGTCA+AGG | 0.638471 | 2.4:+54080470 | None:intergenic |
ATCAAGATCCACATATTCTG+TGG | 0.652227 | 2.4:+54080150 | None:intergenic |
ACTATTGGAAGGACTACTTG+TGG | 0.665121 | 2.4:-54080274 | MS.gene073417:CDS |
CCAAAAGAAGCAACAATCGG+AGG | 0.665472 | 2.4:+54081629 | None:intergenic |
GATGCCACTGTTGAGTTGGG+TGG | 0.668142 | 2.4:-54080625 | MS.gene073417:CDS |
GTGGCCAATGCTGAAACAAG+TGG | 0.669223 | 2.4:+54080022 | None:intergenic |
ATTGGTCAGTCCCTTATGGG+AGG | 0.681509 | 2.4:-54080597 | MS.gene073417:CDS |
TACAGGTTATACAACTACCA+AGG | 0.683064 | 2.4:-54080241 | MS.gene073417:CDS |
TGGTCCACCCAACTCAACAG+TGG | 0.695362 | 2.4:+54080621 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAATATAGAAAACAAT+TGG | + | chr2.4:54081235-54081254 | None:intergenic | 10.0% |
!! | TATATAGTAAAAAATGAATA+TGG | + | chr2.4:54080699-54080718 | None:intergenic | 10.0% |
!! | ATAAATCTCAAAAAGAAAAT+GGG | - | chr2.4:54081450-54081469 | MS.gene073417:CDS | 15.0% |
!!! | ATATACTTATTTGAACTTTT+TGG | - | chr2.4:54080714-54080733 | MS.gene073417:CDS | 15.0% |
!!! | GTTTTCTATATTAATATTCA+GGG | - | chr2.4:54081238-54081257 | MS.gene073417:intron | 15.0% |
!!! | TGTTTTCTATATTAATATTC+AGG | - | chr2.4:54081237-54081256 | MS.gene073417:intron | 15.0% |
!!! | TTTTCTATATTAATATTCAG+GGG | - | chr2.4:54081239-54081258 | MS.gene073417:intron | 15.0% |
!! | ATGCAAAACATATAAATACA+CGG | + | chr2.4:54080398-54080417 | None:intergenic | 20.0% |
!! | CATAAATCTCAAAAAGAAAA+TGG | - | chr2.4:54081449-54081468 | MS.gene073417:CDS | 20.0% |
!! | TATTAGATTAAGTGCATATT+TGG | + | chr2.4:54080638-54080657 | None:intergenic | 20.0% |
!!! | ACAATAGATTCATAATTTGT+AGG | - | chr2.4:54080670-54080689 | MS.gene073417:CDS | 20.0% |
!!! | ATGTTTTGCATTATTTTTCA+TGG | - | chr2.4:54080407-54080426 | MS.gene073417:intron | 20.0% |
!!! | TACATTCTGTCAAATTTTTT+TGG | + | chr2.4:54081426-54081445 | None:intergenic | 20.0% |
!!! | TCTATTTTATTGAATCATGA+AGG | - | chr2.4:54080763-54080782 | MS.gene073417:CDS | 20.0% |
!!! | TGAAGTTATTGATGATATTA+AGG | - | chr2.4:54080828-54080847 | MS.gene073417:intron | 20.0% |
!!! | TTCAATTTTCAACAAAATCA+CGG | - | chr2.4:54080601-54080620 | MS.gene073417:CDS | 20.0% |
!!! | TTTTTGGCTGTATTTTTAAA+GGG | - | chr2.4:54080730-54080749 | MS.gene073417:CDS | 20.0% |
! | AAAGATATGGACCAATTTAA+TGG | - | chr2.4:54081201-54081220 | MS.gene073417:intron | 25.0% |
! | AATTGATGTTCAAAAACAGA+TGG | + | chr2.4:54081549-54081568 | None:intergenic | 25.0% |
! | ACATATAAATACACGGATAA+TGG | + | chr2.4:54080391-54080410 | None:intergenic | 25.0% |
! | AGATATCATCTCATCAAAAT+CGG | + | chr2.4:54080258-54080277 | None:intergenic | 25.0% |
! | TGGTTAGTAAACCATTAAAT+TGG | + | chr2.4:54081215-54081234 | None:intergenic | 25.0% |
!! | ATAGTTTTCATCATAAGGTT+GGG | + | chr2.4:54079965-54079984 | None:intergenic | 25.0% |
!! | ATCGAATATTTTCAATCCAA+AGG | - | chr2.4:54081039-54081058 | MS.gene073417:intron | 25.0% |
!! | ATTTTCTTTGCAAGAAGTTA+AGG | + | chr2.4:54081362-54081381 | None:intergenic | 25.0% |
!! | TTCATGTTTGGTAATTTGAT+TGG | + | chr2.4:54080486-54080505 | None:intergenic | 25.0% |
!!! | CTTTTTGGCTGTATTTTTAA+AGG | - | chr2.4:54080729-54080748 | MS.gene073417:CDS | 25.0% |
!!! | TGCATTATTTTTCATGGATT+TGG | - | chr2.4:54080413-54080432 | MS.gene073417:intron | 25.0% |
AAATCTGTATCCTCTAATGT+TGG | + | chr2.4:54080015-54080034 | None:intergenic | 30.0% | |
AACATTAGAGGATACAGATT+TGG | - | chr2.4:54080014-54080033 | MS.gene073417:CDS | 30.0% | |
AATCTGTATCCTCTAATGTT+GGG | + | chr2.4:54080014-54080033 | None:intergenic | 30.0% | |
ACCTTATGATGAAAACTATG+AGG | - | chr2.4:54079966-54079985 | MS.gene073417:CDS | 30.0% | |
ATATTCTTACAACTGCTTCA+AGG | - | chr2.4:54080893-54080912 | MS.gene073417:intron | 30.0% | |
CAAACATACACTAGAGTAAA+TGG | + | chr2.4:54080516-54080535 | None:intergenic | 30.0% | |
CATTTACTCTAGTGTATGTT+TGG | - | chr2.4:54080514-54080533 | MS.gene073417:CDS | 30.0% | |
CTTGCAAAGAAAATGTAGAT+GGG | - | chr2.4:54081368-54081387 | MS.gene073417:intron | 30.0% | |
GAGAATGACTTACAAAGATA+TGG | - | chr2.4:54081188-54081207 | MS.gene073417:intron | 30.0% | |
GGATTGAAAATATTCGATCA+AGG | + | chr2.4:54081037-54081056 | None:intergenic | 30.0% | |
TATTCTTACAACTGCTTCAA+GGG | - | chr2.4:54080894-54080913 | MS.gene073417:intron | 30.0% | |
TATTGACAAAGAAGCTGAAA+TGG | - | chr2.4:54080984-54081003 | MS.gene073417:intron | 30.0% | |
TCTTGCAAAGAAAATGTAGA+TGG | - | chr2.4:54081367-54081386 | MS.gene073417:intron | 30.0% | |
TTGGATAATCTCTTATCCTT+TGG | - | chr2.4:54080033-54080052 | MS.gene073417:CDS | 30.0% | |
TTTGGATTTCCTATAGTAGT+CGG | - | chr2.4:54080431-54080450 | MS.gene073417:intron | 30.0% | |
! | ATTTTCAACAAAATCACGGT+CGG | - | chr2.4:54080605-54080624 | MS.gene073417:CDS | 30.0% |
! | CATAGTTTTCATCATAAGGT+TGG | + | chr2.4:54079966-54079985 | None:intergenic | 30.0% |
! | TCCTCATAGTTTTCATCATA+AGG | + | chr2.4:54079970-54079989 | None:intergenic | 30.0% |
!! | AGCATTGACAAAATTGCAAT+TGG | + | chr2.4:54081640-54081659 | None:intergenic | 30.0% |
!! | AGGTATTTTGGATCTAATGA+TGG | + | chr2.4:54081342-54081361 | None:intergenic | 30.0% |
!! | AGTCAAAGAATGGATTAAGA+AGG | - | chr2.4:54080104-54080123 | MS.gene073417:CDS | 30.0% |
!! | GGTATTTTGGATCTAATGAT+GGG | + | chr2.4:54081341-54081360 | None:intergenic | 30.0% |
!! | GTATTTTTAAAGGGATGTGA+TGG | - | chr2.4:54080739-54080758 | MS.gene073417:CDS | 30.0% |
!! | TGCAAGAAGTTAAGGTATTT+TGG | + | chr2.4:54081354-54081373 | None:intergenic | 30.0% |
AATGGTCTAGACTTCATGTT+TGG | + | chr2.4:54080498-54080517 | None:intergenic | 35.0% | |
ATCAAGATCCACATATTCTG+TGG | + | chr2.4:54081394-54081413 | None:intergenic | 35.0% | |
GAACCAAAAGAAGCAACAAT+CGG | + | chr2.4:54079918-54079937 | None:intergenic | 35.0% | |
TACAGGTTATACAACTACCA+AGG | - | chr2.4:54081300-54081319 | MS.gene073417:intron | 35.0% | |
TCAAGGAAGTAATGTTCTCA+TGG | + | chr2.4:54081020-54081039 | None:intergenic | 35.0% | |
TCTAGTGTATGTTTGGATTG+TGG | - | chr2.4:54080521-54080540 | MS.gene073417:CDS | 35.0% | |
TGAATCATGAAGGAAGTGAA+AGG | - | chr2.4:54080773-54080792 | MS.gene073417:CDS | 35.0% | |
TGCATAGCAAAGTCAAAGAA+TGG | - | chr2.4:54080094-54080113 | MS.gene073417:CDS | 35.0% | |
TGTTTGGATTGTGGTAAGTT+TGG | - | chr2.4:54080530-54080549 | MS.gene073417:CDS | 35.0% | |
TTATACAACTACCAAGGAAC+AGG | - | chr2.4:54081306-54081325 | MS.gene073417:intron | 35.0% | |
TTGGATTTCCTATAGTAGTC+GGG | - | chr2.4:54080432-54080451 | MS.gene073417:intron | 35.0% | |
! | GCAAGATGGATTCAAATTGA+GGG | + | chr2.4:54080077-54080096 | None:intergenic | 35.0% |
! | GCTGTTTCAATGTCAAAGTT+TGG | - | chr2.4:54081570-54081589 | MS.gene073417:CDS | 35.0% |
! | TGCAAGATGGATTCAAATTG+AGG | + | chr2.4:54080078-54080097 | None:intergenic | 35.0% |
! | TTCAAAAACAGATGGTGTTG+TGG | + | chr2.4:54081541-54081560 | None:intergenic | 35.0% |
! | TTTGACTTTGCTATGCAAGA+TGG | + | chr2.4:54080091-54080110 | None:intergenic | 35.0% |
ACTATTGGAAGGACTACTTG+TGG | - | chr2.4:54081267-54081286 | MS.gene073417:intron | 40.0% | |
ACTTCCATGATTGCTCTGTT+AGG | - | chr2.4:54080160-54080179 | MS.gene073417:CDS | 40.0% | |
AGAAGCTGAAATGGTACCAA+TGG | - | chr2.4:54080993-54081012 | MS.gene073417:intron | 40.0% | |
CAAGTAAGCAAGACATTGAG+AGG | - | chr2.4:54080802-54080821 | MS.gene073417:intron | 40.0% | |
CATATTGGTCAGTCCCTTAT+GGG | - | chr2.4:54080941-54080960 | MS.gene073417:intron | 40.0% | |
CTGAGAGAACAACTAAGTCA+AGG | + | chr2.4:54081074-54081093 | None:intergenic | 40.0% | |
CTTCCATGATTGCTCTGTTA+GGG | - | chr2.4:54080161-54080180 | MS.gene073417:CDS | 40.0% | |
CTTGACTTAGTTGTTCTCTC+AGG | - | chr2.4:54081072-54081091 | MS.gene073417:intron | 40.0% | |
GAAACAAGTGGAGAAGTTCT+TGG | + | chr2.4:54081510-54081529 | None:intergenic | 40.0% | |
GAAGCTGAAATGGTACCAAT+GGG | - | chr2.4:54080994-54081013 | MS.gene073417:intron | 40.0% | |
GAGATGATGAAGGAGAAATC+AGG | - | chr2.4:54081613-54081632 | MS.gene073417:CDS | 40.0% | |
GTTCTTACTGGAGATGATGA+AGG | - | chr2.4:54081603-54081622 | MS.gene073417:CDS | 40.0% | |
TCTACAAGTCCCAACATTAG+AGG | - | chr2.4:54080002-54080021 | MS.gene073417:CDS | 40.0% | |
TTCCATCTTTCCTCCCATAA+GGG | + | chr2.4:54080957-54080976 | None:intergenic | 40.0% | |
TTCTCCACTTGTTTCAGCAT+TGG | - | chr2.4:54081515-54081534 | MS.gene073417:CDS | 40.0% | |
TTTCCATCTTTCCTCCCATA+AGG | + | chr2.4:54080958-54080977 | None:intergenic | 40.0% | |
! | AACACTGATTGCTAGACTAC+AGG | + | chr2.4:54080461-54080480 | None:intergenic | 40.0% |
! | AATCATGGAAGTGCAACCTT+AGG | + | chr2.4:54080152-54080171 | None:intergenic | 40.0% |
! | CAAATTGAGGGCAGCTTTTA+CGG | + | chr2.4:54080065-54080084 | None:intergenic | 40.0% |
! | CTTGTGGCTCTATTCAATAC+AGG | - | chr2.4:54081283-54081302 | MS.gene073417:intron | 40.0% |
! | GCTTTTACGGTAGTAACCAA+AGG | + | chr2.4:54080052-54080071 | None:intergenic | 40.0% |
! | TATTCAGGGGCACATACTAT+TGG | - | chr2.4:54081252-54081271 | MS.gene073417:intron | 40.0% |
! | TCAGCACAAGAGACTGTTTT+AGG | + | chr2.4:54080874-54080893 | None:intergenic | 40.0% |
!! | GGTGTCATTGATGTTCTTAC+TGG | - | chr2.4:54081591-54081610 | MS.gene073417:CDS | 40.0% |
!! | TTTGGATCTAATGATGGGTC+TGG | + | chr2.4:54081336-54081355 | None:intergenic | 40.0% |
ACAGGATTCCCGACTACTAT+AGG | + | chr2.4:54080443-54080462 | None:intergenic | 45.0% | |
CATGATTGCTCTGTTAGGGT+GGG | - | chr2.4:54080165-54080184 | MS.gene073417:CDS | 45.0% | |
CCAAAAGAAGCAACAATCGG+AGG | + | chr2.4:54079915-54079934 | None:intergenic | 45.0% | |
CCATAAGGGACTGACCAATA+TGG | + | chr2.4:54080943-54080962 | None:intergenic | 45.0% | |
CCATATTGGTCAGTCCCTTA+TGG | - | chr2.4:54080940-54080959 | MS.gene073417:intron | 45.0% | |
GTAATGTTCTCATGGCCCAT+TGG | + | chr2.4:54081012-54081031 | None:intergenic | 45.0% | |
TAGATGGGCCACAGAATATG+TGG | - | chr2.4:54081383-54081402 | MS.gene073417:CDS | 45.0% | |
! | CTTTAGCAGCTAGTCTCCTA+AGG | - | chr2.4:54080133-54080152 | MS.gene073417:CDS | 45.0% |
!! | CCTCCGATTGTTGCTTCTTT+TGG | - | chr2.4:54079912-54079931 | MS.gene073417:CDS | 45.0% |
!! | TTGAGTTGGGTGGACCATAT+TGG | - | chr2.4:54080926-54080945 | MS.gene073417:intron | 45.0% |
AAGGGATGCCACTGTTGAGT+TGG | - | chr2.4:54080912-54080931 | MS.gene073417:intron | 50.0% | |
AGGGATGCCACTGTTGAGTT+GGG | - | chr2.4:54080913-54080932 | MS.gene073417:intron | 50.0% | |
ATTGGTCAGTCCCTTATGGG+AGG | - | chr2.4:54080944-54080963 | MS.gene073417:intron | 50.0% | |
CCACCCTAACAGAGCAATCA+TGG | + | chr2.4:54080167-54080186 | None:intergenic | 50.0% | |
CCATGATTGCTCTGTTAGGG+TGG | - | chr2.4:54080164-54080183 | MS.gene073417:CDS | 50.0% | |
GTCAAGGACAGTCAAGCCTT+TGG | + | chr2.4:54081058-54081077 | None:intergenic | 50.0% | |
GTCCCTTATGGGAGGAAAGA+TGG | - | chr2.4:54080952-54080971 | MS.gene073417:intron | 50.0% | |
GTGGCCAATGCTGAAACAAG+TGG | + | chr2.4:54081522-54081541 | None:intergenic | 50.0% | |
! | CAGGGGCACATACTATTGGA+AGG | - | chr2.4:54081256-54081275 | MS.gene073417:intron | 50.0% |
TGGTCCACCCAACTCAACAG+TGG | + | chr2.4:54080923-54080942 | None:intergenic | 55.0% | |
! | GGTCTGGTTTGCCTGTTCCT+TGG | + | chr2.4:54081320-54081339 | None:intergenic | 55.0% |
!! | GATGCCACTGTTGAGTTGGG+TGG | - | chr2.4:54080916-54080935 | MS.gene073417:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 54079898 | 54081665 | 54079898 | ID=MS.gene073417 |
chr2.4 | mRNA | 54079898 | 54081665 | 54079898 | ID=MS.gene073417.t1;Parent=MS.gene073417 |
chr2.4 | exon | 54081381 | 54081665 | 54081381 | ID=MS.gene073417.t1.exon1;Parent=MS.gene073417.t1 |
chr2.4 | CDS | 54081381 | 54081665 | 54081381 | ID=cds.MS.gene073417.t1;Parent=MS.gene073417.t1 |
chr2.4 | exon | 54080470 | 54080812 | 54080470 | ID=MS.gene073417.t1.exon2;Parent=MS.gene073417.t1 |
chr2.4 | CDS | 54080470 | 54080812 | 54080470 | ID=cds.MS.gene073417.t1;Parent=MS.gene073417.t1 |
chr2.4 | exon | 54079898 | 54080304 | 54079898 | ID=MS.gene073417.t1.exon3;Parent=MS.gene073417.t1 |
chr2.4 | CDS | 54079898 | 54080304 | 54079898 | ID=cds.MS.gene073417.t1;Parent=MS.gene073417.t1 |
Gene Sequence |
Protein sequence |