AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02077

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02077.t1 MTR_2g029730 93.043 345 24 0 1 345 1 345 0.0 657
MS.gene02077.t1 MTR_2g029560 84.058 345 54 1 1 345 1 344 0.0 592
MS.gene02077.t1 MTR_2g029820 64.045 356 116 3 1 345 1 355 1.69e-162 458
MS.gene02077.t1 MTR_2g029740 65.882 340 110 2 1 335 1 339 3.41e-160 452
MS.gene02077.t1 MTR_2g029815 64.589 353 116 3 1 345 1 352 8.29e-160 451
MS.gene02077.t1 MTR_2g029800 65.407 344 110 3 11 345 10 353 3.02e-159 450
MS.gene02077.t1 MTR_2g029830 66.566 332 104 1 8 332 4 335 6.60e-159 449
MS.gene02077.t1 MTR_2g029750 65.861 331 108 1 7 332 6 336 1.45e-156 443
MS.gene02077.t1 MTR_2g029850 64.407 354 115 4 1 345 1 352 7.37e-155 439
MS.gene02077.t1 MTR_2g029860 64.826 344 112 3 11 345 10 353 2.72e-151 429
MS.gene02077.t1 MTR_2g028980 63.205 337 118 2 1 332 1 336 1.79e-150 427
MS.gene02077.t1 MTR_2g029910 62.391 343 121 3 11 345 11 353 2.33e-149 425
MS.gene02077.t1 MTR_2g029830 72.243 263 73 0 70 332 5 267 5.94e-137 390
MS.gene02077.t1 MTR_7g093370 56.869 313 134 1 16 327 60 372 6.78e-121 353
MS.gene02077.t1 MTR_1g054205 53.560 323 149 1 6 327 5 327 2.39e-118 345
MS.gene02077.t1 MTR_5g021060 51.155 303 147 1 24 326 29 330 2.76e-110 325
MS.gene02077.t1 MTR_4g125940 54.276 304 135 2 25 326 28 329 2.13e-108 320
MS.gene02077.t1 MTR_8g076820 49.175 303 153 1 24 326 29 330 6.57e-107 316
MS.gene02077.t1 MTR_5g017860 51.839 299 140 3 29 326 31 326 2.54e-103 306
MS.gene02077.t1 MTR_5g017850 51.171 299 142 3 29 326 31 326 2.67e-102 304
MS.gene02077.t1 MTR_4g125940 56.727 275 115 2 54 326 2 274 3.09e-102 302
MS.gene02077.t1 MTR_5g074970 46.847 333 161 5 1 326 3 326 4.42e-101 301
MS.gene02077.t1 MTR_1g022970 48.675 302 155 0 25 326 46 347 1.03e-100 301
MS.gene02077.t1 MTR_2g040000 49.836 305 148 2 25 326 29 331 8.33e-100 298
MS.gene02077.t1 MTR_3g466200 47.040 321 157 5 10 326 9 320 4.90e-96 288
MS.gene02077.t1 MTR_4g029200 48.525 305 148 2 22 326 43 338 1.11e-95 288
MS.gene02077.t1 MTR_4g122640 46.037 328 167 3 6 326 12 336 2.89e-95 286
MS.gene02077.t1 MTR_3g094650 50.331 302 139 3 23 322 26 318 7.02e-94 283
MS.gene02077.t1 MTR_7g072510 46.689 302 152 2 25 326 20 312 2.99e-93 280
MS.gene02077.t1 MTR_4g029190 47.531 324 158 5 6 326 26 340 4.11e-93 281
MS.gene02077.t1 MTR_5g083860 47.697 304 148 3 25 326 31 325 2.37e-92 279
MS.gene02077.t1 MTR_7g072480 47.368 304 151 2 23 326 22 316 1.19e-91 276
MS.gene02077.t1 MTR_2g084110 47.651 298 147 2 29 326 29 317 1.49e-91 276
MS.gene02077.t1 MTR_5g074760 48.208 307 148 5 25 328 25 323 1.57e-91 276
MS.gene02077.t1 MTR_2g084080 47.315 298 148 2 29 326 29 317 5.43e-91 275
MS.gene02077.t1 MTR_4g083710 45.921 331 167 5 1 326 1 324 9.40e-91 275
MS.gene02077.t1 MTR_5g014100 46.774 310 161 2 21 326 22 331 4.65e-90 273
MS.gene02077.t1 MTR_3g072190 45.695 302 155 2 25 326 26 318 9.43e-90 272
MS.gene02077.t1 MTR_5g074710 45.593 329 168 5 1 326 1 321 1.17e-88 269
MS.gene02077.t1 MTR_5g074740 47.213 305 150 5 25 326 25 321 5.10e-88 268
MS.gene02077.t1 MTR_5g049280 44.304 316 165 6 18 326 26 337 6.43e-88 268
MS.gene02077.t1 MTR_5g074860 47.712 306 149 5 23 325 27 324 1.34e-87 266
MS.gene02077.t1 MTR_3g094670 47.022 319 157 4 6 322 10 318 2.63e-87 266
MS.gene02077.t1 MTR_2g084020 46.309 298 152 2 29 326 29 318 4.25e-87 265
MS.gene02077.t1 MTR_2g084090 45.574 305 156 3 23 326 23 318 7.72e-87 265
MS.gene02077.t1 MTR_4g029170 44.828 319 163 5 11 326 13 321 1.30e-86 264
MS.gene02077.t1 MTR_2g084010 45.724 304 157 2 23 326 23 318 5.50e-86 262
MS.gene02077.t1 MTR_4g133800 45.333 300 149 7 30 326 46 333 9.56e-86 262
MS.gene02077.t1 MTR_4g029180 46.667 300 149 4 29 326 31 321 2.61e-85 261
MS.gene02077.t1 MTR_3g094630 47.284 313 154 3 16 326 19 322 5.34e-85 260
MS.gene02077.t1 MTR_4g074995 46.254 307 142 4 23 326 22 308 1.26e-84 258
MS.gene02077.t1 MTR_1g115900 44.918 305 157 5 25 327 27 322 2.43e-84 258
MS.gene02077.t1 MTR_2g084000 44.737 304 160 3 23 326 24 319 3.24e-84 258
MS.gene02077.t1 MTR_7g026990 44.040 302 153 5 29 327 35 323 1.76e-82 253
MS.gene02077.t1 MTR_4g030890 44.040 302 164 3 25 326 100 396 9.29e-82 254
MS.gene02077.t1 MTR_2g008710 44.702 302 156 5 29 326 31 325 1.23e-81 251
MS.gene02077.t1 MTR_2g088770 43.322 307 168 5 22 326 23 325 1.76e-81 251
MS.gene02077.t1 MTR_2g437770 44.079 304 158 6 25 327 50 342 9.00e-81 249
MS.gene02077.t1 MTR_4g031140 42.395 309 171 4 25 332 28 330 6.31e-80 248
MS.gene02077.t1 MTR_4g046713 40.673 327 190 3 1 326 3 326 1.15e-79 246
MS.gene02077.t1 MTR_6g043280 42.202 327 165 7 11 326 19 332 2.46e-79 246
MS.gene02077.t1 MTR_7g107520 42.991 321 176 5 6 326 7 320 3.04e-79 245
MS.gene02077.t1 MTR_4g074990 43.648 307 147 4 23 326 22 305 1.82e-78 243
MS.gene02077.t1 MTR_3g466180 43.377 302 162 2 25 326 31 323 5.03e-78 242
MS.gene02077.t1 MTR_6g043240 42.947 319 166 7 25 341 42 346 9.19e-78 242
MS.gene02077.t1 MTR_1g086320 43.046 302 166 3 29 326 34 333 9.33e-78 242
MS.gene02077.t1 MTR_1g038680 43.894 303 162 5 29 326 33 332 9.45e-78 241
MS.gene02077.t1 MTR_3g467600 42.138 318 174 3 12 326 14 324 1.05e-77 241
MS.gene02077.t1 MTR_4g114210 42.395 309 162 6 25 326 21 320 3.25e-77 240
MS.gene02077.t1 MTR_2g029880 59.242 211 74 3 137 345 9 209 1.35e-76 234
MS.gene02077.t1 MTR_5g022870 40.061 327 184 8 1 326 1 316 2.30e-76 238
MS.gene02077.t1 MTR_3g092990 40.252 318 187 2 10 326 11 326 2.34e-76 238
MS.gene02077.t1 MTR_1g086490 39.766 342 188 5 1 326 1 340 4.97e-76 238
MS.gene02077.t1 MTR_8g075100 42.244 303 165 7 25 326 26 319 1.19e-75 236
MS.gene02077.t1 MTR_1g025980 42.053 302 166 6 25 325 24 317 4.93e-75 234
MS.gene02077.t1 MTR_1g101830 40.397 302 174 4 25 326 27 322 2.17e-74 233
MS.gene02077.t1 MTR_1g077000 41.060 302 165 5 25 326 39 327 3.68e-74 232
MS.gene02077.t1 MTR_4g087965 40.656 305 172 6 25 323 42 343 1.43e-72 229
MS.gene02077.t1 MTR_0155s0040 38.580 324 185 6 3 326 6 315 1.87e-72 228
MS.gene02077.t1 MTR_4g074980 42.105 304 144 5 23 326 23 294 7.38e-72 225
MS.gene02077.t1 MTR_1g090760 39.414 307 181 4 23 326 26 330 5.15e-71 224
MS.gene02077.t1 MTR_7g029030 41.692 331 177 9 1 326 1 320 1.22e-70 223
MS.gene02077.t1 MTR_3g072190 43.629 259 137 2 68 326 2 251 1.49e-70 220
MS.gene02077.t1 MTR_7g086820 39.869 306 175 5 21 326 16 312 1.56e-70 223
MS.gene02077.t1 MTR_5g016010 37.764 331 197 5 1 325 1 328 3.51e-69 219
MS.gene02077.t1 MTR_4g074980 47.257 237 116 2 23 256 23 253 4.58e-69 217
MS.gene02077.t1 MTR_4g132490 37.846 325 193 5 4 326 10 327 4.29e-68 217
MS.gene02077.t1 MTR_6g043460 40.836 311 171 6 25 333 36 335 4.29e-68 217
MS.gene02077.t1 MTR_6g027440 39.815 324 184 7 4 326 1 314 1.55e-66 213
MS.gene02077.t1 MTR_4g127670 39.934 303 172 5 24 322 23 319 2.86e-65 209
MS.gene02077.t1 MTR_5g074860 39.869 306 134 4 23 325 27 285 4.37e-65 207
MS.gene02077.t1 MTR_4g095450 39.024 328 186 6 1 322 1 320 1.50e-64 207
MS.gene02077.t1 MTR_1g009750 40.391 307 173 7 25 326 27 328 2.60e-64 207
MS.gene02077.t1 MTR_3g092990 38.050 318 183 3 10 326 11 315 5.78e-64 206
MS.gene02077.t1 MTR_2g008160 38.608 316 178 8 18 326 17 323 2.85e-63 204
MS.gene02077.t1 MTR_8g062780 35.423 319 202 3 10 326 8 324 1.97e-62 202
MS.gene02077.t1 MTR_2g008730 44.898 245 127 4 86 326 61 301 6.13e-62 200
MS.gene02077.t1 MTR_2g078610 35.758 330 179 6 25 323 76 403 1.08e-60 200
MS.gene02077.t1 MTR_2g067440 35.045 331 181 7 25 325 60 386 1.64e-60 199
MS.gene02077.t1 MTR_2g077990 36.556 331 175 7 25 323 76 403 2.80e-60 199
MS.gene02077.t1 MTR_2g099175 36.808 307 182 4 25 326 36 335 4.11e-60 196
MS.gene02077.t1 MTR_5g033470 36.774 310 187 6 23 326 71 377 3.84e-59 195
MS.gene02077.t1 MTR_7g086870 36.513 304 181 5 23 326 20 311 9.92e-59 192
MS.gene02077.t1 MTR_3g105790 38.689 305 177 4 25 326 25 322 3.83e-58 191
MS.gene02077.t1 MTR_0286s0010 37.459 307 181 7 25 326 34 334 2.18e-57 189
MS.gene02077.t1 MTR_6g008075 37.459 307 181 7 25 326 34 334 2.18e-57 189
MS.gene02077.t1 MTR_0147s0010 34.891 321 173 4 25 325 77 381 3.74e-57 190
MS.gene02077.t1 MTR_2g078280 36.562 320 168 7 25 312 76 392 8.13e-56 187
MS.gene02077.t1 MTR_1g009750 37.459 307 165 8 25 326 27 311 5.83e-55 182
MS.gene02077.t1 MTR_2g067450 36.393 305 184 6 25 325 11 309 1.29e-54 181
MS.gene02077.t1 MTR_1g066710 34.295 312 192 5 21 328 23 325 2.75e-54 181
MS.gene02077.t1 MTR_1g066380 33.441 311 196 4 21 328 23 325 2.18e-51 173
MS.gene02077.t1 MTR_1g066680 34.084 311 193 5 21 328 23 324 1.66e-49 168
MS.gene02077.t1 MTR_1g066640 33.441 311 196 4 21 328 23 325 6.79e-49 167
MS.gene02077.t1 MTR_4g132110 33.444 302 188 5 29 326 36 328 4.06e-48 165
MS.gene02077.t1 MTR_2g008160 33.861 316 158 8 18 326 17 288 9.34e-48 163
MS.gene02077.t1 MTR_5g074700 41.810 232 110 6 98 326 5 214 1.29e-46 157
MS.gene02077.t1 MTR_4g132110 32.899 307 188 6 29 326 36 333 3.95e-46 160
MS.gene02077.t1 MTR_2g008160 43.860 171 92 3 20 190 19 185 1.34e-43 149
MS.gene02077.t1 MTR_1g066380 34.470 264 160 5 69 328 3 257 1.23e-42 149
MS.gene02077.t1 MTR_7g072490 38.800 250 90 4 71 320 2 188 2.35e-42 146
MS.gene02077.t1 MTR_3g105790 39.496 238 138 3 92 326 12 246 8.14e-42 146
MS.gene02077.t1 MTR_3g072210 43.229 192 100 4 136 326 55 238 1.74e-40 142
MS.gene02077.t1 MTR_3g072260 47.934 121 63 0 21 141 22 142 5.08e-34 122
MS.gene02077.t1 MTR_2g078560 31.858 226 121 4 131 325 96 319 8.33e-30 116
MS.gene02077.t1 MTR_5g058120 38.037 163 88 3 160 322 6 155 7.61e-26 104
MS.gene02077.t1 MTR_2g077980 28.000 275 156 8 87 323 11 281 2.21e-24 101
MS.gene02077.t1 MTR_2g029930 55.000 100 17 3 23 108 17 102 2.60e-24 95.9
MS.gene02077.t1 MTR_1g089005 40.310 129 70 2 15 137 5 132 1.29e-22 92.8
MS.gene02077.t1 MTR_7g086790 30.851 188 108 4 72 259 17 182 3.35e-20 87.4
MS.gene02077.t1 MTR_1g098320 45.455 88 46 1 245 332 45 130 4.11e-18 80.1
MS.gene02077.t1 MTR_3g462850 36.552 145 81 6 189 326 9 149 5.51e-18 80.1
MS.gene02077.t1 MTR_6g048160 53.521 71 29 2 64 134 22 88 1.53e-17 77.0
MS.gene02077.t1 MTR_4g114220 48.101 79 31 2 51 129 29 97 1.95e-17 78.6
MS.gene02077.t1 MTR_3g088160 28.141 199 115 7 118 310 180 356 8.96e-15 75.1
MS.gene02077.t1 MTR_3g088160 28.141 199 115 7 118 310 180 356 1.31e-14 74.7
MS.gene02077.t1 MTR_4g031040 30.286 175 78 3 84 258 1 131 2.39e-14 69.7
MS.gene02077.t1 MTR_5g074770 39.785 93 55 1 233 325 17 108 7.39e-14 67.4
MS.gene02077.t1 MTR_4g012865 45.588 68 37 0 25 92 77 144 8.32e-13 65.9
MS.gene02077.t1 MTR_7g086810 30.081 123 60 1 21 143 2 98 2.14e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02077.t1 AT5G06720 57.632 321 136 0 7 327 14 334 2.47e-130 376
MS.gene02077.t1 AT5G06730 55.319 329 147 0 7 335 15 343 5.02e-128 371
MS.gene02077.t1 AT2G38390 57.426 303 128 1 25 326 31 333 8.55e-124 360
MS.gene02077.t1 AT2G38380 56.436 303 131 1 25 326 31 333 9.40e-122 354
MS.gene02077.t1 AT4G08770 54.662 311 139 2 22 330 21 331 7.36e-121 352
MS.gene02077.t1 AT4G08780 54.341 311 140 2 22 330 21 331 4.40e-120 350
MS.gene02077.t1 AT3G32980 57.655 307 128 2 25 329 31 337 7.97e-120 350
MS.gene02077.t1 AT3G49120 57.329 307 129 2 25 329 32 338 1.22e-119 349
MS.gene02077.t1 AT3G49110 54.294 326 144 3 6 329 17 339 7.33e-117 342
MS.gene02077.t1 AT5G66390 48.701 308 157 1 19 326 27 333 2.64e-107 317
MS.gene02077.t1 AT2G18150 50.163 307 152 1 20 326 31 336 6.39e-107 316
MS.gene02077.t1 AT2G18140 50.993 302 147 1 25 326 35 335 2.49e-106 315
MS.gene02077.t1 AT1G44970 51.475 305 148 0 22 326 42 346 2.91e-105 312
MS.gene02077.t1 AT4G36430 49.013 304 154 1 23 326 28 330 4.60e-105 311
MS.gene02077.t1 AT1G49570 50.485 309 148 3 19 324 42 348 5.37e-104 309
MS.gene02077.t1 AT5G19890 50.000 322 149 5 7 326 16 327 6.13e-104 308
MS.gene02077.t1 AT5G19880 52.117 307 144 2 23 326 23 329 1.29e-103 308
MS.gene02077.t1 AT3G50990 48.675 302 154 1 25 326 41 341 1.64e-101 303
MS.gene02077.t1 AT1G14550 48.185 303 149 3 25 326 26 321 1.21e-93 282
MS.gene02077.t1 AT5G05340 47.697 304 148 4 25 326 30 324 3.33e-93 281
MS.gene02077.t1 AT2G35380 50.000 306 149 3 25 326 30 335 7.59e-91 275
MS.gene02077.t1 AT1G14540 45.399 326 167 3 1 326 1 315 2.87e-90 273
MS.gene02077.t1 AT5G58400 44.615 325 168 4 5 326 10 325 2.99e-87 266
MS.gene02077.t1 AT5G58390 47.213 305 149 4 25 326 21 316 5.25e-87 265
MS.gene02077.t1 AT1G68850 45.277 307 162 5 25 326 30 335 1.97e-86 264
MS.gene02077.t1 AT4G16270 44.816 299 160 4 29 326 54 348 1.46e-85 262
MS.gene02077.t1 AT3G03670 41.195 318 178 4 12 326 10 321 2.77e-81 250
MS.gene02077.t1 AT2G22420 42.020 307 163 5 25 326 23 319 1.30e-79 246
MS.gene02077.t1 AT5G15180 41.639 305 168 5 25 326 32 329 2.19e-79 246
MS.gene02077.t1 AT2G41480 44.337 309 156 7 25 326 29 328 2.34e-79 246
MS.gene02077.t1 AT4G11290 41.538 325 182 4 8 326 4 326 1.63e-78 243
MS.gene02077.t1 AT5G64120 44.966 298 156 5 29 326 39 328 2.04e-78 243
MS.gene02077.t1 AT1G71695 43.269 312 162 7 21 329 43 342 1.12e-77 242
MS.gene02077.t1 AT3G01190 40.491 326 186 6 2 326 3 321 2.23e-77 240
MS.gene02077.t1 AT5G51890 40.000 305 172 6 25 326 26 322 3.66e-75 234
MS.gene02077.t1 AT1G05260 39.514 329 189 6 4 326 1 325 9.59e-75 234
MS.gene02077.t1 AT5G17820 39.550 311 176 5 16 326 15 313 1.52e-74 233
MS.gene02077.t1 AT2G18980 40.810 321 179 5 10 326 10 323 3.73e-74 232
MS.gene02077.t1 AT1G05240 40.461 304 167 5 29 326 30 325 9.81e-74 231
MS.gene02077.t1 AT1G05250 40.461 304 167 5 29 326 30 325 9.81e-74 231
MS.gene02077.t1 AT5G42180 40.000 320 183 6 7 325 5 316 2.15e-73 230
MS.gene02077.t1 AT4G25980 40.391 307 172 5 25 326 26 326 4.39e-73 229
MS.gene02077.t1 AT5G17820 39.550 311 176 5 16 326 68 366 6.42e-73 230
MS.gene02077.t1 AT4G37530 42.020 307 173 3 23 326 25 329 2.25e-72 228
MS.gene02077.t1 AT5G39580 44.040 302 154 7 29 326 29 319 6.03e-72 226
MS.gene02077.t1 AT3G21770 40.453 309 178 5 17 323 21 325 1.18e-71 226
MS.gene02077.t1 AT4G33420 40.063 317 171 6 16 326 22 325 4.58e-70 222
MS.gene02077.t1 AT1G30870 39.935 308 172 6 25 329 51 348 4.82e-70 223
MS.gene02077.t1 AT4G33420 40.063 317 171 6 16 326 69 372 3.54e-69 221
MS.gene02077.t1 AT5G64100 40.532 301 166 6 29 326 41 331 6.58e-69 219
MS.gene02077.t1 AT5G67400 39.514 329 190 6 3 326 5 329 9.56e-69 218
MS.gene02077.t1 AT5G64110 43.046 302 159 7 29 326 38 330 1.22e-68 218
MS.gene02077.t1 AT4G30170 39.610 308 175 5 23 326 25 325 1.25e-68 218
MS.gene02077.t1 AT4G33870 36.119 335 176 5 24 323 67 398 1.95e-68 220
MS.gene02077.t1 AT3G49960 38.154 325 194 4 6 326 8 329 3.16e-68 217
MS.gene02077.t1 AT2G35380 48.988 247 122 3 84 326 1 247 5.04e-68 214
MS.gene02077.t1 AT2G34060 40.328 305 173 6 25 323 42 343 1.10e-66 214
MS.gene02077.t1 AT5G14130 39.355 310 173 7 23 326 30 330 2.93e-66 212
MS.gene02077.t1 AT5G14130 39.610 308 171 7 25 326 73 371 6.67e-66 213
MS.gene02077.t1 AT2G39040 40.514 311 174 7 23 326 44 350 1.13e-65 211
MS.gene02077.t1 AT4G37520 38.762 307 183 3 23 326 25 329 2.01e-65 210
MS.gene02077.t1 AT3G28200 37.829 304 179 4 25 326 21 316 1.79e-64 207
MS.gene02077.t1 AT4G37520 38.436 307 181 4 23 326 25 326 4.41e-64 206
MS.gene02077.t1 AT1G77100 40.256 313 169 8 21 326 18 319 1.17e-63 205
MS.gene02077.t1 AT5G24070 39.274 303 171 6 31 328 43 337 1.23e-63 206
MS.gene02077.t1 AT4G37530 43.529 255 141 2 23 274 25 279 3.23e-63 202
MS.gene02077.t1 AT5G40150 37.864 309 183 4 20 326 27 328 6.15e-63 203
MS.gene02077.t1 AT1G24110 36.066 305 188 5 25 326 22 322 4.57e-62 201
MS.gene02077.t1 AT4G26010 36.728 324 189 6 4 326 1 309 2.65e-61 199
MS.gene02077.t1 AT4G26010 36.728 324 189 6 4 326 29 337 5.94e-61 199
MS.gene02077.t1 AT4G17690 36.721 305 182 5 25 326 26 322 1.42e-60 197
MS.gene02077.t1 AT5G22410 36.760 321 189 8 7 322 10 321 3.92e-60 196
MS.gene02077.t1 AT5G47000 33.642 324 205 5 6 326 14 330 6.00e-60 196
MS.gene02077.t1 AT2G24800 39.869 306 173 5 25 326 31 329 1.27e-59 195
MS.gene02077.t1 AT4G31760 38.312 308 174 6 25 326 29 326 5.03e-59 193
MS.gene02077.t1 AT2G43480 39.286 280 157 6 52 326 64 335 3.84e-58 191
MS.gene02077.t1 AT1G34510 34.462 325 195 7 4 326 1 309 6.40e-55 182
MS.gene02077.t1 AT3G17070 35.650 331 193 9 8 326 17 339 3.71e-53 178
MS.gene02077.t1 AT4G21960 32.239 335 209 7 2 328 5 329 1.43e-48 166
MS.gene02077.t1 AT2G37130 32.803 314 199 5 17 326 22 327 4.49e-47 162
MS.gene02077.t1 AT4G25980 45.882 170 88 3 25 194 71 236 2.82e-46 159
MS.gene02077.t1 AT2G37130 32.781 302 191 5 29 326 3 296 6.99e-45 155
MS.gene02077.t1 AT3G17070 34.397 282 168 9 53 326 4 276 1.02e-38 139
MS.gene02077.t1 AT5G39580 41.748 206 105 5 29 227 29 226 6.39e-38 135
MS.gene02077.t1 AT2G24800 43.931 173 87 3 25 194 31 196 1.93e-33 124
MS.gene02077.t1 AT1G77490 26.394 269 148 11 59 310 106 341 1.67e-16 80.5
MS.gene02077.t1 AT1G77490 26.394 269 148 11 59 310 106 341 2.93e-16 79.7
MS.gene02077.t1 AT4G08390 25.461 271 148 11 59 310 126 361 6.36e-14 72.4
MS.gene02077.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.39e-14 72.4
MS.gene02077.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.39e-14 72.4
MS.gene02077.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.39e-14 72.4
MS.gene02077.t1 AT4G32320 26.165 279 150 10 36 309 96 323 9.79e-13 68.6

Find 84 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGAAGTATCTTCTATTT+TGG 0.206832 2.2:-58251760 MS.gene02077:intron
GGTTGTTTCCTGTTGAGTTT+TGG 0.220863 2.2:+58250374 None:intergenic
TTCCAAACAGAAACTCATTA+AGG 0.226113 2.2:-58251869 MS.gene02077:CDS
AGGAAACAACCTAGCCAATT+TGG 0.278951 2.2:-58250362 MS.gene02077:CDS
GATGAGACTGGCACCGATTC+GGG 0.301159 2.2:+58252590 None:intergenic
CCCCTTAATGAGTTTCTGTT+TGG 0.309457 2.2:+58251867 None:intergenic
CTGGTGATGAAGGGGAAATT+AGG 0.315180 2.2:-58250135 MS.gene02077:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.2:+58252633 None:intergenic
AATTCTGAAAGAAGAGAGTT+TGG 0.333317 2.2:+58250200 None:intergenic
CAGAAACTCATTAAGGGGTT+TGG 0.333622 2.2:-58251862 MS.gene02077:CDS
TACTTAGGTGCTCATACATT+TGG 0.341082 2.2:-58250508 MS.gene02077:intron
AAAGCTTCATTTCTTGTTCA+AGG 0.342588 2.2:-58250806 MS.gene02077:CDS
TCCCTTCTTCCCAATGGAAT+TGG 0.355749 2.2:+58250899 None:intergenic
GGTTCCATGCGTGTTGTACT+AGG 0.361248 2.2:-58252744 MS.gene02077:CDS
TTTGTAAATGGTAACTCCTC+TGG 0.366528 2.2:-58250100 MS.gene02077:CDS
ATGATTAGAATGGCGAATAT+TGG 0.398231 2.2:-58250166 MS.gene02077:CDS
TATTTGTTATCAAAGTGATT+AGG 0.408604 2.2:+58250328 None:intergenic
TCCAAACAGAAACTCATTAA+GGG 0.412491 2.2:-58251868 MS.gene02077:CDS
GCGAATATTGGAGTGTTAAC+TGG 0.413231 2.2:-58250154 MS.gene02077:CDS
TGATGAGACTGGCACCGATT+CGG 0.427794 2.2:+58252589 None:intergenic
AGGTGTGGTAAGGTCCAAAT+TGG 0.430992 2.2:+58250348 None:intergenic
CTTGCAAATCAAAACCTTCC+CGG 0.432751 2.2:-58250854 MS.gene02077:CDS
ATGGCAATGGTATCTGCATT+AGG 0.433475 2.2:+58250244 None:intergenic
TCCCTCATGGCCAATTCCAT+TGG 0.444960 2.2:-58250909 MS.gene02077:CDS
GTTGTGTTTAGTGTTGGATC+AGG 0.445757 2.2:+58250427 None:intergenic
ATATGTCCCCAAAACTCAAC+AGG 0.446009 2.2:-58250382 MS.gene02077:CDS
CCCTCATGGCCAATTCCATT+GGG 0.446682 2.2:-58250908 MS.gene02077:CDS
AAGTTGATCCAATGTAGAAA+AGG 0.449869 2.2:+58250829 None:intergenic
ATATGACTCTAAACACAATA+GGG 0.454551 2.2:+58252634 None:intergenic
ATCCAATGTAGAAAAGGGTC+CGG 0.454593 2.2:+58250835 None:intergenic
TCCCTCACTGATCCCCGAAT+CGG 0.454674 2.2:-58252603 MS.gene02077:CDS
GAATCGGTGCCAGTCTCATC+AGG 0.463560 2.2:-58252587 MS.gene02077:CDS
TCCAATCTTCAAAACCTCAA+TGG 0.466595 2.2:-58250301 MS.gene02077:CDS
GGCCAATTCCATTGGGAAGA+AGG 0.467383 2.2:-58250901 MS.gene02077:CDS
AGTTGATCCAATGTAGAAAA+GGG 0.473578 2.2:+58250830 None:intergenic
TCAGCACAAGAAACAGTGTT+AGG 0.474603 2.2:+58251798 None:intergenic
TTTGTGATGCATGGAGGGTA+TGG 0.479593 2.2:-58252702 MS.gene02077:CDS
CACTTCGAAGTAAGCCATTG+AGG 0.486340 2.2:+58250287 None:intergenic
CTATACAATTTCAGTGGCAC+TGG 0.489654 2.2:-58250454 MS.gene02077:CDS
TAGCGTGTCGATGATTAGAA+TGG 0.500186 2.2:-58250176 MS.gene02077:CDS
TGGTGTGCATTTGTGATGCA+TGG 0.501927 2.2:-58252711 MS.gene02077:CDS
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.2:-58250773 MS.gene02077:intron
GGAGTGTTAACTGGTGATGA+AGG 0.514476 2.2:-58250145 MS.gene02077:CDS
AACACAATAGGGTATAGATC+TGG 0.518782 2.2:+58252645 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.2:-58252628 MS.gene02077:CDS
ATTTGCAAGAGTTATGTTTG+CGG 0.522007 2.2:+58250868 None:intergenic
GCCAATTCCATTGGGAAGAA+GGG 0.526946 2.2:-58250900 MS.gene02077:CDS
CCCAATGGAATTGGCCATGA+GGG 0.531181 2.2:+58250908 None:intergenic
TCCAATGTAGAAAAGGGTCC+GGG 0.535516 2.2:+58250836 None:intergenic
AGAAGATACTTCAGCAGCAA+TGG 0.536212 2.2:+58251767 None:intergenic
AAGTAAGTTGTGTTTAGTGT+TGG 0.540670 2.2:+58250421 None:intergenic
CAAAGTGATTAGGTGTGGTA+AGG 0.543295 2.2:+58250338 None:intergenic
TGATGCATGGAGGGTATGGT+TGG 0.543555 2.2:-58252698 MS.gene02077:CDS
CATGCGTGTTGTACTAGGGT+TGG 0.550754 2.2:-58252739 MS.gene02077:CDS
AAGCTATCCCTTCTTCCCAA+TGG 0.554508 2.2:+58250893 None:intergenic
TTGTACTAGGGTTGGCACTT+TGG 0.555400 2.2:-58252731 MS.gene02077:CDS
CATGTTTCACTGTAGAATGA+TGG 0.560211 2.2:+58252669 None:intergenic
CCAAACAGAAACTCATTAAG+GGG 0.561754 2.2:-58251867 MS.gene02077:CDS
TTGATCTATGAACAGGGAGG+AGG 0.566092 2.2:-58250932 MS.gene02077:intron
AAAGCTATTAACAATGGCAA+TGG 0.569604 2.2:+58250231 None:intergenic
GCTCGTGGTGGATCAAAAGA+TGG 0.571292 2.2:-58250073 MS.gene02077:CDS
TGTTTGTGACAGGGCTGCGA+TGG 0.571388 2.2:-58251942 MS.gene02077:intron
GTTATCAAAGTGATTAGGTG+TGG 0.571420 2.2:+58250333 None:intergenic
ACCGATTCGGGGATCAGTGA+GGG 0.574096 2.2:+58252602 None:intergenic
TCTGCTAAAGCTATTAACAA+TGG 0.580549 2.2:+58250225 None:intergenic
GTGCATTTGTGATGCATGGA+GGG 0.581824 2.2:-58252707 MS.gene02077:CDS
TGCCACTGAAATTGTATAGA+CGG 0.584385 2.2:+58250458 None:intergenic
TCCTCTGGATTAGCTCGTGG+TGG 0.586455 2.2:-58250085 MS.gene02077:CDS
GTTCCATGCGTGTTGTACTA+GGG 0.589091 2.2:-58252743 MS.gene02077:CDS
TGGTAAGGTCCAAATTGGCT+AGG 0.596004 2.2:+58250353 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.2:-58250922 MS.gene02077:intron
AAAATGAAGCCTGATGAGAC+TGG 0.599915 2.2:+58252578 None:intergenic
AACTCCTCTGGATTAGCTCG+TGG 0.601383 2.2:-58250088 MS.gene02077:CDS
GAGTGTTAACTGGTGATGAA+GGG 0.609584 2.2:-58250144 MS.gene02077:CDS
ATGAGACTGGCACCGATTCG+GGG 0.630611 2.2:+58252591 None:intergenic
AACCGTCTATACAATTTCAG+TGG 0.634780 2.2:-58250460 MS.gene02077:CDS
CAACCCTAGTACAACACGCA+TGG 0.644628 2.2:+58252740 None:intergenic
ATGTAGAAAAGGGTCCGGGA+AGG 0.649336 2.2:+58250840 None:intergenic
TGTGCATTTGTGATGCATGG+AGG 0.652684 2.2:-58252708 MS.gene02077:CDS
AGTGTTAACTGGTGATGAAG+GGG 0.656296 2.2:-58250143 MS.gene02077:CDS
CACCGATTCGGGGATCAGTG+AGG 0.657501 2.2:+58252601 None:intergenic
TCCCAATGGAATTGGCCATG+AGG 0.657766 2.2:+58250907 None:intergenic
AATGGTATCTGCATTAGGAG+TGG 0.670287 2.2:+58250249 None:intergenic
TCCACCACGAGCTAATCCAG+AGG 0.739992 2.2:+58250084 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAGAAATTATTTATA+TGG + chr2.2:58250299-58250318 None:intergenic 10.0%
!! ATTTAAATAAAAAACTAACA+TGG - chr2.2:58250776-58250795 MS.gene02077:CDS 10.0%
!!! CATAGAAAATAAATTATTTT+AGG + chr2.2:58251749-58251768 None:intergenic 10.0%
!!! TAAATAATAGTTTTTTCTAA+TGG + chr2.2:58251556-58251575 None:intergenic 10.0%
!! AAAAATGAATGTTCTTATAT+TGG - chr2.2:58250555-58250574 MS.gene02077:intron 15.0%
!! AAAATATACTATAAGTACAA+GGG - chr2.2:58250815-58250834 MS.gene02077:CDS 15.0%
!! AAAATGAATGTTCTTATATT+GGG - chr2.2:58250556-58250575 MS.gene02077:intron 15.0%
!!! AAATTATTTTAGGTATTGAT+AGG + chr2.2:58251739-58251758 None:intergenic 15.0%
!!! ATAATTTTATCCATATAACT+AGG + chr2.2:58251100-58251119 None:intergenic 15.0%
!!! ATGACAAGATTTTAATTATT+GGG - chr2.2:58250714-58250733 MS.gene02077:intron 15.0%
!!! TAAATCTTTATTTTGTTTGT+AGG + chr2.2:58250628-58250647 None:intergenic 15.0%
!!! TAATGTTTTGTTTTTATATC+AGG - chr2.2:58251130-58251149 MS.gene02077:intron 15.0%
!! CAAAATATACTATAAGTACA+AGG - chr2.2:58250814-58250833 MS.gene02077:CDS 20.0%
!! CCTAAGTATAAAAACAAATT+AGG + chr2.2:58252281-58252300 None:intergenic 20.0%
!!! CCTAATTTGTTTTTATACTT+AGG - chr2.2:58252278-58252297 MS.gene02077:intron 20.0%
!!! GATGACAAGATTTTAATTAT+TGG - chr2.2:58250713-58250732 MS.gene02077:intron 20.0%
!!! TATTCCTTTTCTTTTTCTTT+TGG + chr2.2:58251685-58251704 None:intergenic 20.0%
!!! TATTTGTTATCAAAGTGATT+AGG + chr2.2:58252476-58252495 None:intergenic 20.0%
!!! TTGCAATGTAATTTTGTAAA+TGG - chr2.2:58252689-58252708 MS.gene02077:CDS 20.0%
!!! TTGGAACTTTATTTTATGAA+TGG + chr2.2:58251267-58251286 None:intergenic 20.0%
!!! TTTTCTTCTTCTTTTTTTAG+AGG - chr2.2:58250531-58250550 MS.gene02077:intron 20.0%
!!! TTTTTAGTGGTATTCAATAA+CGG - chr2.2:58250589-58250608 MS.gene02077:intron 20.0%
!!! TTTTTCATTACCTAGTTATA+TGG - chr2.2:58251087-58251106 MS.gene02077:intron 20.0%
! AACCAAATAGAAAGAAATCA+TGG + chr2.2:58251506-58251525 None:intergenic 25.0%
! AAGTGAAAGAGATAAAAGAA+GGG + chr2.2:58251416-58251435 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2.2:58250171-58250190 None:intergenic 25.0%
! ACCAAATAGAAAGAAATCAT+GGG + chr2.2:58251505-58251524 None:intergenic 25.0%
! ACTTACCAATACATTCTAAA+AGG - chr2.2:58251233-58251252 MS.gene02077:intron 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.2:58250170-58250189 None:intergenic 25.0%
! ATCATAGCTCAAACTTTATA+TGG - chr2.2:58251793-58251812 MS.gene02077:CDS 25.0%
! ATGTATATTGATCTATGAAC+AGG - chr2.2:58251862-58251881 MS.gene02077:CDS 25.0%
! ATTTCTAACTTTCTTACACT+AGG - chr2.2:58250307-58250326 MS.gene02077:CDS 25.0%
! GTAACCAAAAGAAAAAGAAA+AGG - chr2.2:58251678-58251697 MS.gene02077:intron 25.0%
! TCAAAAAAGTAAGTTTGCAT+TGG + chr2.2:58251286-58251305 None:intergenic 25.0%
! TCAATTTCAAAGAAAGAAGT+AGG + chr2.2:58250348-58250367 None:intergenic 25.0%
! TCTTTGCCTAAAATGATTAT+AGG - chr2.2:58250437-58250456 MS.gene02077:CDS 25.0%
! TGTATATTGATCTATGAACA+GGG - chr2.2:58251863-58251882 MS.gene02077:CDS 25.0%
!! ATCGAACCTATAATCATTTT+AGG + chr2.2:58250446-58250465 None:intergenic 25.0%
!! ATGGTGTATTGAGATTATTT+TGG + chr2.2:58251212-58251231 None:intergenic 25.0%
!! CTTCTTTTACTATACTGATA+TGG - chr2.2:58250390-58250409 MS.gene02077:CDS 25.0%
!! GAACGGTATAATGTTAATTT+TGG - chr2.2:58250366-58250385 MS.gene02077:CDS 25.0%
!! TAATTCAATAAGTTGACGTT+GGG + chr2.2:58250693-58250712 None:intergenic 25.0%
!! TACATTAGATGACTTTAAGA+TGG + chr2.2:58251847-58251866 None:intergenic 25.0%
!!! ATAGAATGACTATTTTTGTG+AGG + chr2.2:58252149-58252168 None:intergenic 25.0%
!!! CTTCTTTCTTTGAAATTGAA+CGG - chr2.2:58250349-58250368 MS.gene02077:CDS 25.0%
!!! GTGATTTTTGACTTGAAAAA+TGG - chr2.2:58252252-58252271 MS.gene02077:intron 25.0%
!!! TAGAATGACTATTTTTGTGA+GGG + chr2.2:58252148-58252167 None:intergenic 25.0%
!!! TTATTTTGTTTGTAGGTCAT+TGG + chr2.2:58250621-58250640 None:intergenic 25.0%
!!! TTTTAATGAAGCTTTGTAGT+TGG + chr2.2:58252089-58252108 None:intergenic 25.0%
AAAGCTATTAACAATGGCAA+TGG + chr2.2:58252573-58252592 None:intergenic 30.0%
AAAGCTTCATTTCTTGTTCA+AGG - chr2.2:58251995-58252014 MS.gene02077:intron 30.0%
AAGGGATAAAACATTTGTCT+TGG + chr2.2:58251398-58251417 None:intergenic 30.0%
AAGTAAGTTGTGTTTAGTGT+TGG + chr2.2:58252383-58252402 None:intergenic 30.0%
AGTTGATCCAATGTAGAAAA+GGG + chr2.2:58251974-58251993 None:intergenic 30.0%
ATGATTAGAATGGCGAATAT+TGG - chr2.2:58252635-58252654 MS.gene02077:CDS 30.0%
ATTTGCAAGAGTTATGTTTG+CGG + chr2.2:58251936-58251955 None:intergenic 30.0%
GAAGTGAAAGAGATAAAAGA+AGG + chr2.2:58251417-58251436 None:intergenic 30.0%
TCCAAACAGAAACTCATTAA+GGG - chr2.2:58250933-58250952 MS.gene02077:intron 30.0%
TCCCATGATTTCTTTCTATT+TGG - chr2.2:58251501-58251520 MS.gene02077:intron 30.0%
TCTGCTAAAGCTATTAACAA+TGG + chr2.2:58252579-58252598 None:intergenic 30.0%
TTCCAAACAGAAACTCATTA+AGG - chr2.2:58250932-58250951 MS.gene02077:intron 30.0%
! AAGTTGATCCAATGTAGAAA+AGG + chr2.2:58251975-58251994 None:intergenic 30.0%
! AATTCTGAAAGAAGAGAGTT+TGG + chr2.2:58252604-58252623 None:intergenic 30.0%
! ACCAATACATTCTAAAAGGT+TGG - chr2.2:58251237-58251256 MS.gene02077:intron 30.0%
! CTAATTCAATAAGTTGACGT+TGG + chr2.2:58250694-58250713 None:intergenic 30.0%
! TAGAATGTATTGGTAAGTGA+TGG + chr2.2:58251231-58251250 None:intergenic 30.0%
! TATCACGGTTGTTGTAATTT+TGG - chr2.2:58252198-58252217 MS.gene02077:intron 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.2:58250173-58250192 MS.gene02077:CDS 30.0%
! TTTAAGATGGACATTTGAGA+AGG + chr2.2:58251834-58251853 None:intergenic 30.0%
! TTTTGATCCCTCAATTATCA+CGG - chr2.2:58252183-58252202 MS.gene02077:intron 30.0%
!! TGCTGAAGTATCTTCTATTT+TGG - chr2.2:58251041-58251060 MS.gene02077:intron 30.0%
!! TTTTGGTGGATAGAGTATTT+TGG + chr2.2:58251195-58251214 None:intergenic 30.0%
!!! GTGTATTGAGATTATTTTGG+TGG + chr2.2:58251209-58251228 None:intergenic 30.0%
AACACAATAGGGTATAGATC+TGG + chr2.2:58250159-58250178 None:intergenic 35.0%
AACCGTCTATACAATTTCAG+TGG - chr2.2:58252341-58252360 MS.gene02077:intron 35.0%
ACAACAACCGTGATAATTGA+GGG + chr2.2:58252193-58252212 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.2:58252028-58252047 MS.gene02077:intron 35.0%
ATATTGATCTATGAACAGGG+AGG - chr2.2:58251866-58251885 MS.gene02077:CDS 35.0%
CATGTTTCACTGTAGAATGA+TGG + chr2.2:58250135-58250154 None:intergenic 35.0%
CCAAACAGAAACTCATTAAG+GGG - chr2.2:58250934-58250953 MS.gene02077:intron 35.0%
CTTCTCAAATAGACGAATTG+AGG + chr2.2:58250474-58250493 None:intergenic 35.0%
GAAGTAGGTTGTAATTGCAA+AGG + chr2.2:58250333-58250352 None:intergenic 35.0%
GAATGCTAGCGTAAAAAACA+TGG + chr2.2:58252231-58252250 None:intergenic 35.0%
GTTATCAAAGTGATTAGGTG+TGG + chr2.2:58252471-58252490 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.2:58250850-58250869 MS.gene02077:CDS 35.0%
TACAACAACCGTGATAATTG+AGG + chr2.2:58252194-58252213 None:intergenic 35.0%
TACTTAGGTGCTCATACATT+TGG - chr2.2:58252293-58252312 MS.gene02077:intron 35.0%
TCCAATCTTCAAAACCTCAA+TGG - chr2.2:58252500-58252519 MS.gene02077:intron 35.0%
TGCCACTGAAATTGTATAGA+CGG + chr2.2:58252346-58252365 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.2:58250849-58250868 MS.gene02077:CDS 35.0%
TTTGTAAATGGTAACTCCTC+TGG - chr2.2:58252701-58252720 MS.gene02077:CDS 35.0%
! TTGTTTCCTGTTGAGTTTTG+GGG + chr2.2:58252428-58252447 None:intergenic 35.0%
!! GGGCTCATAAAGATTTTTAG+TGG - chr2.2:58250576-58250595 MS.gene02077:intron 35.0%
!! GGTTGTTGTAATTTTGGTCT+CGG - chr2.2:58252204-58252223 MS.gene02077:intron 35.0%
!! GTTGTTTCCTGTTGAGTTTT+GGG + chr2.2:58252429-58252448 None:intergenic 35.0%
!!! GCCAACCTTTTAGAATGTAT+TGG + chr2.2:58251241-58251260 None:intergenic 35.0%
AAAATGAAGCCTGATGAGAC+TGG + chr2.2:58250226-58250245 None:intergenic 40.0%
AAATCATGGGACCACAAAAC+CGG + chr2.2:58251492-58251511 None:intergenic 40.0%
AATGGTATCTGCATTAGGAG+TGG + chr2.2:58252555-58252574 None:intergenic 40.0%
AGAAGATACTTCAGCAGCAA+TGG + chr2.2:58251037-58251056 None:intergenic 40.0%
AGGAAACAACCTAGCCAATT+TGG - chr2.2:58252439-58252458 MS.gene02077:intron 40.0%
ATATGTCCCCAAAACTCAAC+AGG - chr2.2:58252419-58252438 MS.gene02077:intron 40.0%
ATCCAATGTAGAAAAGGGTC+CGG + chr2.2:58251969-58251988 None:intergenic 40.0%
ATGGCAATGGTATCTGCATT+AGG + chr2.2:58252560-58252579 None:intergenic 40.0%
CAAAGTGATTAGGTGTGGTA+AGG + chr2.2:58252466-58252485 None:intergenic 40.0%
CAGAAACTCATTAAGGGGTT+TGG - chr2.2:58250939-58250958 MS.gene02077:intron 40.0%
CCCCTTAATGAGTTTCTGTT+TGG + chr2.2:58250937-58250956 None:intergenic 40.0%
CTATACAATTTCAGTGGCAC+TGG - chr2.2:58252347-58252366 MS.gene02077:intron 40.0%
CTTGCAAATCAAAACCTTCC+CGG - chr2.2:58251947-58251966 MS.gene02077:intron 40.0%
TCAGCACAAGAAACAGTGTT+AGG + chr2.2:58251006-58251025 None:intergenic 40.0%
! AGTGTTAACTGGTGATGAAG+GGG - chr2.2:58252658-58252677 MS.gene02077:CDS 40.0%
! GAGTGTTAACTGGTGATGAA+GGG - chr2.2:58252657-58252676 MS.gene02077:CDS 40.0%
! GCGAATATTGGAGTGTTAAC+TGG - chr2.2:58252647-58252666 MS.gene02077:CDS 40.0%
! GTTGTGTTTAGTGTTGGATC+AGG + chr2.2:58252377-58252396 None:intergenic 40.0%
! TAGCGTGTCGATGATTAGAA+TGG - chr2.2:58252625-58252644 MS.gene02077:CDS 40.0%
!! CTTGTTGTTGAGTTGACAGA+AGG + chr2.2:58251469-58251488 None:intergenic 40.0%
!! GGTTGTTTCCTGTTGAGTTT+TGG + chr2.2:58252430-58252449 None:intergenic 40.0%
!!! GCCATTGAGGTTTTGAAGAT+TGG + chr2.2:58252504-58252523 None:intergenic 40.0%
AAGCTATCCCTTCTTCCCAA+TGG + chr2.2:58251911-58251930 None:intergenic 45.0%
AGGTGTGGTAAGGTCCAAAT+TGG + chr2.2:58252456-58252475 None:intergenic 45.0%
CACTTCGAAGTAAGCCATTG+AGG + chr2.2:58252517-58252536 None:intergenic 45.0%
CTGTCAACTCAACAACAAGC+CGG - chr2.2:58251470-58251489 MS.gene02077:intron 45.0%
GCCAATTCCATTGGGAAGAA+GGG - chr2.2:58251901-58251920 MS.gene02077:CDS 45.0%
GTGCATTTGTGATGCATGGA+GGG - chr2.2:58250094-58250113 MS.gene02077:CDS 45.0%
GTTCCATGCGTGTTGTACTA+GGG - chr2.2:58250058-58250077 MS.gene02077:CDS 45.0%
TCCAATGTAGAAAAGGGTCC+GGG + chr2.2:58251968-58251987 None:intergenic 45.0%
TCCCTTCTTCCCAATGGAAT+TGG + chr2.2:58251905-58251924 None:intergenic 45.0%
TGCATCTTGCGGAGGAAATT+GGG + chr2.2:58251372-58251391 None:intergenic 45.0%
TGGTAAGGTCCAAATTGGCT+AGG + chr2.2:58252451-58252470 None:intergenic 45.0%
TGGTGTGCATTTGTGATGCA+TGG - chr2.2:58250090-58250109 MS.gene02077:CDS 45.0%
TGTGCATTTGTGATGCATGG+AGG - chr2.2:58250093-58250112 MS.gene02077:CDS 45.0%
TTGATCTATGAACAGGGAGG+AGG - chr2.2:58251869-58251888 MS.gene02077:CDS 45.0%
TTTGTGATGCATGGAGGGTA+TGG - chr2.2:58250099-58250118 MS.gene02077:CDS 45.0%
! CTGGTGATGAAGGGGAAATT+AGG - chr2.2:58252666-58252685 MS.gene02077:CDS 45.0%
! GGAGTGTTAACTGGTGATGA+AGG - chr2.2:58252656-58252675 MS.gene02077:CDS 45.0%
! TGTCTTGGAAGTGCATCTTG+CGG + chr2.2:58251383-58251402 None:intergenic 45.0%
! TTGTACTAGGGTTGGCACTT+TGG - chr2.2:58250070-58250089 MS.gene02077:CDS 45.0%
!! GAGTTGACAGAAGGTGTTGT+GGG + chr2.2:58251460-58251479 None:intergenic 45.0%
!! TCAACAACAAGCCGGTTTTG+TGG - chr2.2:58251478-58251497 MS.gene02077:intron 45.0%
!! TGAGTTGACAGAAGGTGTTG+TGG + chr2.2:58251461-58251480 None:intergenic 45.0%
!! AAAAACTTATAAAATAAATA+AGG - chr2.2:58251342-58251361 MS.gene02077:intron 5.0%
ATGTAGAAAAGGGTCCGGGA+AGG + chr2.2:58251964-58251983 None:intergenic 50.0%
CAACCCTAGTACAACACGCA+TGG + chr2.2:58250064-58250083 None:intergenic 50.0%
CATGCGTGTTGTACTAGGGT+TGG - chr2.2:58250062-58250081 MS.gene02077:CDS 50.0%
CCCAATGGAATTGGCCATGA+GGG + chr2.2:58251896-58251915 None:intergenic 50.0%
CCCTCATGGCCAATTCCATT+GGG - chr2.2:58251893-58251912 MS.gene02077:CDS 50.0%
GGCCAATTCCATTGGGAAGA+AGG - chr2.2:58251900-58251919 MS.gene02077:CDS 50.0%
GGTTCCATGCGTGTTGTACT+AGG - chr2.2:58250057-58250076 MS.gene02077:CDS 50.0%
GTGCATCTTGCGGAGGAAAT+TGG + chr2.2:58251373-58251392 None:intergenic 50.0%
TCCCAATGGAATTGGCCATG+AGG + chr2.2:58251897-58251916 None:intergenic 50.0%
TCCCTCATGGCCAATTCCAT+TGG - chr2.2:58251892-58251911 MS.gene02077:CDS 50.0%
! TCCCGGACCCTTTTCTACAT+TGG - chr2.2:58251964-58251983 MS.gene02077:intron 50.0%
! TGATGCATGGAGGGTATGGT+TGG - chr2.2:58250103-58250122 MS.gene02077:CDS 50.0%
!! AACTCCTCTGGATTAGCTCG+TGG - chr2.2:58252713-58252732 MS.gene02077:CDS 50.0%
!! GCTCGTGGTGGATCAAAAGA+TGG - chr2.2:58252728-58252747 MS.gene02077:CDS 50.0%
!! TGATGAGACTGGCACCGATT+CGG + chr2.2:58250215-58250234 None:intergenic 50.0%
TCCACCACGAGCTAATCCAG+AGG + chr2.2:58252720-58252739 None:intergenic 55.0%
TCCCTCACTGATCCCCGAAT+CGG - chr2.2:58250198-58250217 MS.gene02077:CDS 55.0%
TGTTTGTGACAGGGCTGCGA+TGG - chr2.2:58250859-58250878 MS.gene02077:CDS 55.0%
! CTTGGAAGTGCATCTTGCGG+AGG + chr2.2:58251380-58251399 None:intergenic 55.0%
!! ACCGATTCGGGGATCAGTGA+GGG + chr2.2:58250202-58250221 None:intergenic 55.0%
!! ATGAGACTGGCACCGATTCG+GGG + chr2.2:58250213-58250232 None:intergenic 55.0%
!! GAATCGGTGCCAGTCTCATC+AGG - chr2.2:58250214-58250233 MS.gene02077:CDS 55.0%
!! GATGAGACTGGCACCGATTC+GGG + chr2.2:58250214-58250233 None:intergenic 55.0%
!! TCCTCTGGATTAGCTCGTGG+TGG - chr2.2:58252716-58252735 MS.gene02077:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.2:58251879-58251898 MS.gene02077:CDS 60.0%
!! CACCGATTCGGGGATCAGTG+AGG + chr2.2:58250203-58250222 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58250054 58252769 58250054 ID=MS.gene02077
chr2.2 mRNA 58250054 58252769 58250054 ID=MS.gene02077.t1;Parent=MS.gene02077
chr2.2 exon 58252560 58252769 58252560 ID=MS.gene02077.t1.exon1;Parent=MS.gene02077.t1
chr2.2 CDS 58252560 58252769 58252560 ID=cds.MS.gene02077.t1;Parent=MS.gene02077.t1
chr2.2 exon 58251761 58251952 58251761 ID=MS.gene02077.t1.exon2;Parent=MS.gene02077.t1
chr2.2 CDS 58251761 58251952 58251761 ID=cds.MS.gene02077.t1;Parent=MS.gene02077.t1
chr2.2 exon 58250774 58250939 58250774 ID=MS.gene02077.t1.exon3;Parent=MS.gene02077.t1
chr2.2 CDS 58250774 58250939 58250774 ID=cds.MS.gene02077.t1;Parent=MS.gene02077.t1
chr2.2 exon 58250054 58250523 58250054 ID=MS.gene02077.t1.exon4;Parent=MS.gene02077.t1
chr2.2 CDS 58250054 58250523 58250054 ID=cds.MS.gene02077.t1;Parent=MS.gene02077.t1
Gene Sequence

>MS.gene02077

ATGGGTTCCATGCGTGTTGTACTAGGGTTGGCACTTTGGTGTGCATTTGTGATGCATGGAGGGTATGGTTGGCTCAGTCCATCATTCTACAGTGAAACATGTCCAGATCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATCGGTGCCAGTCTCATCAGGCTTCATTTTCACGATTGCTTTGTTCAAGTATGTTATTATCTATAGATTGTTATGTTCATCCATATAAATAATTTCTAACTTTCTTACACTAGGCCTTTGCAATTACAACCTACTTCTTTCTTTGAAATTGAACGGTATAATGTTAATTTTGGACTTCTTTTACTATACTGATATGGTGTTGAAAAGTTTAGTAACAAAGTTCTTTGCCTAAAATGATTATAGGTTCGATCGATTCCTCAATTCGTCTATTTGAGAAGAAGTTTGATCATGTGTGTAGATTAAAAATGAACGTTCTTTTCTTCTTCTTTTTTTAGAGGAAAAAATGAATGTTCTTATATTGGGCTCATAAAGATTTTTAGTGGTATTCAATAACGGAATATACCAATGACCTACAAACAAAATAAAGATTTAAATATGATTTTAGTCAATGCATTATAGTTTTTTTTTTTTAATCCCAACGTCAACTTATTGAATTAGATGACAAGATTTTAATTATTGGGTGAGTGACTAAGAACAATTTTAACAATTGTAAAGACAAAATTTAAATAAAAAACTAACATGGATTAAAAATTAAAATCAAAATATACTATAAGTACAAGGGCTTATGCATGTTGTTTATGCATGTTTGTGACAGGGCTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACAGAAACTCATTAAGGGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAGAAGAATGTCCTAACACTGTTTCTTGTGCTGATATTCTTACCATTGCTGCTGAAGTATCTTCTATTTTGGTATGTTTTTAATTTCATCAACTTTTTTTCATTACCTAGTTATATGGATAAAATTATTTTAAAATTTTAATGTTTTGTTTTTATATCAGGAGCTTTGTTTTTTTAACATCAAACAAAATTTTATATTCACCAAAATACTCTATCCACCAAAATAATCTCAATACACCATCACTTACCAATACATTCTAAAAGGTTGGCATACCATTCATAAAATAAAGTTCCAATGCAAACTTACTTTTTTGAATTTATTAACATATGCAAATTTGCATATGATAAAAAAAAAACTTATAAAATAAATAAGGATATCCCAATTTCCTCCGCAAGATGCACTTCCAAGACAAATGTTTTATCCCTTCTTTTATCTCTTTCACTTCTGCATGTTTTGTACAAATTGCCCACAACACCTTCTGTCAACTCAACAACAAGCCGGTTTTGTGGTCCCATGATTTCTTTCTATTTGGTTGAGTTGTACTCTTTTAATATTCATTTGCCATTAGAAAAAACTATTATTTACATATGAATTTTTTTAATTAAATATAGTGAATTTTTTATTGTGATTAATAATTTTGAGCAATTATCTCTCAAACTTTTTTTGAGCAATAAGAAATAGTTTTTGTAACCAAAAGAAAAAGAAAAGGAATAGTTTCACTAAGTAATTTATTTATTTTCTATGCCTATCAATACCTAAAATAATTTATTTTCTATGATTTTAATTATATATATAATTAAAATCATAGCTCAAACTTTATATGGTCACTTATAATTTTTCCTTCTCAAATGTCCATCTTAAAGTCATCTAATGTATATTGATCTATGAACAGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGGGATAGCTTAACCGCAAACATAACTCTTGCAAATCAAAACCTTCCCGGACCCTTTTCTACATTGGATCAACTTAAAGCTTCATTTCTTGTTCAAGGTCTCAACACTACAGATTTAGTTACACTCTCAGGTATAATATTACACATAATCATCAATTTAATATTTACCAACTACAAAGCTTCATTAAAAATAGATTTATGCACTTTTAATTCTCATATTTTATTACCCTCACAAAAATAGTCATTCTATTTTAAAATAAAATTTTTTGATCCCTCAATTATCACGGTTGTTGTAATTTTGGTCTCGGTCCATGTTTTTTACGCTAGCATTCTGTGATTTTTGACTTGAAAAATGGTGACCTAATTTGTTTTTATACTTAGGTGCTCATACATTTGGAAGAGCTCGTTGCAGTACATTCATCAACCGTCTATACAATTTCAGTGGCACTGGAAATCCTGATCCAACACTAAACACAACTTACTTACAAACATTGCGTCTGATATGTCCCCAAAACTCAACAGGAAACAACCTAGCCAATTTGGACCTTACCACACCTAATCACTTTGATAACAAATATTACTCCAATCTTCAAAACCTCAATGGCTTACTTCGAAGTGATCAAGTGCTATTCTCCACTCCTAATGCAGATACCATTGCCATTGTTAATAGCTTTAGCAGAAACCAAACTCTCTTCTTTCAGAATTTTAGCGTGTCGATGATTAGAATGGCGAATATTGGAGTGTTAACTGGTGATGAAGGGGAAATTAGGTTGCAATGTAATTTTGTAAATGGTAACTCCTCTGGATTAGCTCGTGGTGGATCAAAAGATGGCTTGTTAAGCTCATTCTAA
Protein sequence

>MS.gene02077.t1

MGSMRVVLGLALWCAFVMHGGYGWLSPSFYSETCPDLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNRNSLRGLDVVNQIKTAVEEECPNTVSCADILTIAAEVSSILGGGPSWPIPLGRRDSLTANITLANQNLPGPFSTLDQLKASFLVQGLNTTDLVTLSGAHTFGRARCSTFINRLYNFSGTGNPDPTLNTTYLQTLRLICPQNSTGNNLANLDLTTPNHFDNKYYSNLQNLNGLLRSDQVLFSTPNADTIAIVNSFSRNQTLFFQNFSVSMIRMANIGVLTGDEGEIRLQCNFVNGNSSGLARGGSKDGLLSSF