Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74553.t1 | XP_003594502.1 | 92.1 | 353 | 28 | 0 | 1 | 353 | 1 | 353 | 1.20E-182 | 649 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74553.t1 | Q9FG34 | 58.6 | 324 | 133 | 1 | 16 | 339 | 19 | 341 | 2.4e-102 | 373.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74553.t1 | G7IJV0 | 92.1 | 353 | 28 | 0 | 1 | 353 | 1 | 353 | 8.8e-183 | 649.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050133 | MS.gene74553 | 0.804539 | 2.06E-49 | -1.69E-46 |
MS.gene050406 | MS.gene74553 | -0.801208 | 1.00E-48 | -1.69E-46 |
MS.gene050426 | MS.gene74553 | 0.824715 | 6.95E-54 | -1.69E-46 |
MS.gene050464 | MS.gene74553 | -0.813263 | 2.80E-51 | -1.69E-46 |
MS.gene050529 | MS.gene74553 | -0.82834 | 9.49E-55 | -1.69E-46 |
MS.gene050670 | MS.gene74553 | -0.800648 | 1.31E-48 | -1.69E-46 |
MS.gene050971 | MS.gene74553 | -0.81018 | 1.31E-50 | -1.69E-46 |
MS.gene051996 | MS.gene74553 | 0.802246 | 6.15E-49 | -1.69E-46 |
MS.gene052011 | MS.gene74553 | 0.825213 | 5.30E-54 | -1.69E-46 |
MS.gene052223 | MS.gene74553 | 0.838992 | 2.07E-57 | -1.69E-46 |
MS.gene052702 | MS.gene74553 | 0.829876 | 4.03E-55 | -1.69E-46 |
MS.gene054277 | MS.gene74553 | 0.827492 | 1.52E-54 | -1.69E-46 |
MS.gene054349 | MS.gene74553 | -0.806211 | 9.18E-50 | -1.69E-46 |
MS.gene054742 | MS.gene74553 | 0.827607 | 1.42E-54 | -1.69E-46 |
MS.gene055595 | MS.gene74553 | 0.8036 | 3.23E-49 | -1.69E-46 |
MS.gene055601 | MS.gene74553 | 0.835729 | 1.42E-56 | -1.69E-46 |
MS.gene056330 | MS.gene74553 | 0.859213 | 4.83E-63 | -1.69E-46 |
MS.gene056690 | MS.gene74553 | 0.833831 | 4.25E-56 | -1.69E-46 |
MS.gene056691 | MS.gene74553 | 0.853448 | 2.37E-61 | -1.69E-46 |
MS.gene056899 | MS.gene74553 | 0.841794 | 3.83E-58 | -1.69E-46 |
MS.gene056920 | MS.gene74553 | 0.828842 | 7.18E-55 | -1.69E-46 |
MS.gene056923 | MS.gene74553 | 0.812679 | 3.75E-51 | -1.69E-46 |
MS.gene056924 | MS.gene74553 | 0.810231 | 1.28E-50 | -1.69E-46 |
MS.gene057544 | MS.gene74553 | 0.809522 | 1.82E-50 | -1.69E-46 |
MS.gene058218 | MS.gene74553 | 0.835218 | 1.91E-56 | -1.69E-46 |
MS.gene059011 | MS.gene74553 | -0.802948 | 4.40E-49 | -1.69E-46 |
MS.gene059043 | MS.gene74553 | 0.82084 | 5.55E-53 | -1.69E-46 |
MS.gene059402 | MS.gene74553 | 0.800173 | 1.63E-48 | -1.69E-46 |
MS.gene059420 | MS.gene74553 | -0.801407 | 9.14E-49 | -1.69E-46 |
MS.gene060087 | MS.gene74553 | 0.817208 | 3.71E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74553.t1 | MTR_2g029910 | 92.068 | 353 | 28 | 0 | 1 | 353 | 1 | 353 | 0.0 | 659 |
MS.gene74553.t1 | MTR_2g029850 | 76.353 | 351 | 81 | 2 | 4 | 353 | 3 | 352 | 0.0 | 531 |
MS.gene74553.t1 | MTR_2g029860 | 74.286 | 350 | 85 | 4 | 7 | 353 | 6 | 353 | 0.0 | 505 |
MS.gene74553.t1 | MTR_2g029820 | 69.014 | 355 | 103 | 4 | 4 | 353 | 3 | 355 | 5.49e-177 | 495 |
MS.gene74553.t1 | MTR_2g029800 | 68.376 | 351 | 108 | 2 | 4 | 352 | 3 | 352 | 2.22e-174 | 488 |
MS.gene74553.t1 | MTR_2g029815 | 67.733 | 344 | 109 | 2 | 11 | 353 | 10 | 352 | 4.16e-168 | 473 |
MS.gene74553.t1 | MTR_2g029830 | 69.760 | 334 | 95 | 3 | 23 | 351 | 21 | 353 | 5.95e-164 | 462 |
MS.gene74553.t1 | MTR_2g029740 | 63.842 | 354 | 123 | 2 | 3 | 352 | 2 | 354 | 3.10e-159 | 450 |
MS.gene74553.t1 | MTR_2g028980 | 63.739 | 353 | 123 | 2 | 4 | 352 | 3 | 354 | 3.03e-157 | 445 |
MS.gene74553.t1 | MTR_2g029750 | 63.277 | 354 | 124 | 3 | 4 | 353 | 3 | 354 | 1.39e-154 | 438 |
MS.gene74553.t1 | MTR_2g029560 | 62.647 | 340 | 119 | 3 | 14 | 353 | 13 | 344 | 3.53e-148 | 422 |
MS.gene74553.t1 | MTR_2g029730 | 61.808 | 343 | 123 | 3 | 11 | 353 | 11 | 345 | 1.50e-144 | 412 |
MS.gene74553.t1 | MTR_2g029830 | 69.504 | 282 | 80 | 3 | 75 | 351 | 5 | 285 | 1.55e-134 | 385 |
MS.gene74553.t1 | MTR_7g093370 | 58.766 | 308 | 125 | 2 | 26 | 332 | 65 | 371 | 4.52e-121 | 354 |
MS.gene74553.t1 | MTR_1g054205 | 56.774 | 310 | 132 | 2 | 24 | 332 | 18 | 326 | 4.26e-116 | 340 |
MS.gene74553.t1 | MTR_2g029880 | 74.766 | 214 | 43 | 2 | 140 | 353 | 7 | 209 | 3.33e-107 | 313 |
MS.gene74553.t1 | MTR_8g076820 | 50.000 | 304 | 150 | 2 | 30 | 333 | 30 | 331 | 2.44e-102 | 305 |
MS.gene74553.t1 | MTR_4g125940 | 48.665 | 337 | 162 | 5 | 1 | 333 | 1 | 330 | 1.16e-99 | 298 |
MS.gene74553.t1 | MTR_5g021060 | 49.505 | 303 | 151 | 2 | 30 | 332 | 30 | 330 | 2.31e-99 | 297 |
MS.gene74553.t1 | MTR_2g084090 | 49.026 | 308 | 148 | 2 | 25 | 332 | 20 | 318 | 3.06e-99 | 296 |
MS.gene74553.t1 | MTR_5g017860 | 47.869 | 305 | 156 | 2 | 28 | 332 | 25 | 326 | 2.26e-98 | 294 |
MS.gene74553.t1 | MTR_5g017850 | 48.208 | 307 | 152 | 3 | 28 | 332 | 25 | 326 | 3.07e-97 | 291 |
MS.gene74553.t1 | MTR_3g094650 | 47.840 | 324 | 155 | 4 | 6 | 328 | 8 | 318 | 1.01e-95 | 288 |
MS.gene74553.t1 | MTR_1g022970 | 48.845 | 303 | 154 | 1 | 30 | 332 | 46 | 347 | 3.57e-95 | 287 |
MS.gene74553.t1 | MTR_4g083710 | 49.026 | 308 | 148 | 4 | 27 | 332 | 24 | 324 | 1.06e-94 | 285 |
MS.gene74553.t1 | MTR_2g084080 | 48.052 | 308 | 150 | 3 | 25 | 332 | 20 | 317 | 4.01e-94 | 283 |
MS.gene74553.t1 | MTR_2g084110 | 48.544 | 309 | 147 | 4 | 25 | 332 | 20 | 317 | 3.13e-93 | 281 |
MS.gene74553.t1 | MTR_3g466200 | 48.387 | 310 | 149 | 4 | 25 | 332 | 20 | 320 | 3.37e-93 | 281 |
MS.gene74553.t1 | MTR_4g029170 | 47.649 | 319 | 155 | 5 | 16 | 332 | 13 | 321 | 9.05e-93 | 280 |
MS.gene74553.t1 | MTR_3g072190 | 46.906 | 307 | 153 | 3 | 26 | 332 | 22 | 318 | 1.68e-91 | 276 |
MS.gene74553.t1 | MTR_4g029180 | 50.000 | 302 | 139 | 5 | 33 | 332 | 30 | 321 | 5.48e-91 | 275 |
MS.gene74553.t1 | MTR_5g049280 | 44.089 | 313 | 171 | 4 | 24 | 333 | 27 | 338 | 7.16e-91 | 276 |
MS.gene74553.t1 | MTR_7g072510 | 46.405 | 306 | 154 | 3 | 27 | 332 | 17 | 312 | 7.63e-91 | 275 |
MS.gene74553.t1 | MTR_2g084020 | 46.753 | 308 | 155 | 3 | 25 | 332 | 20 | 318 | 9.76e-91 | 275 |
MS.gene74553.t1 | MTR_2g040000 | 47.403 | 308 | 156 | 3 | 29 | 333 | 28 | 332 | 1.51e-90 | 275 |
MS.gene74553.t1 | MTR_4g125940 | 52.708 | 277 | 126 | 3 | 59 | 333 | 2 | 275 | 8.94e-90 | 271 |
MS.gene74553.t1 | MTR_4g029200 | 46.129 | 310 | 157 | 3 | 23 | 332 | 39 | 338 | 6.31e-89 | 271 |
MS.gene74553.t1 | MTR_4g122640 | 46.053 | 304 | 158 | 4 | 30 | 332 | 38 | 336 | 6.83e-89 | 271 |
MS.gene74553.t1 | MTR_2g084010 | 45.231 | 325 | 169 | 3 | 8 | 332 | 3 | 318 | 1.01e-88 | 270 |
MS.gene74553.t1 | MTR_3g094670 | 46.296 | 324 | 160 | 4 | 6 | 328 | 8 | 318 | 1.94e-88 | 269 |
MS.gene74553.t1 | MTR_5g074970 | 47.403 | 308 | 150 | 4 | 28 | 332 | 28 | 326 | 2.86e-88 | 269 |
MS.gene74553.t1 | MTR_3g094630 | 46.646 | 328 | 161 | 4 | 6 | 332 | 8 | 322 | 5.87e-88 | 268 |
MS.gene74553.t1 | MTR_5g074760 | 45.672 | 335 | 165 | 6 | 1 | 332 | 1 | 321 | 1.98e-87 | 266 |
MS.gene74553.t1 | MTR_2g084000 | 46.078 | 306 | 156 | 3 | 27 | 332 | 23 | 319 | 2.14e-87 | 266 |
MS.gene74553.t1 | MTR_5g074740 | 47.097 | 310 | 152 | 5 | 28 | 334 | 23 | 323 | 2.74e-87 | 266 |
MS.gene74553.t1 | MTR_4g074995 | 47.403 | 308 | 140 | 6 | 27 | 332 | 21 | 308 | 2.37e-86 | 263 |
MS.gene74553.t1 | MTR_7g072480 | 47.213 | 305 | 151 | 3 | 28 | 332 | 22 | 316 | 3.60e-86 | 263 |
MS.gene74553.t1 | MTR_4g030890 | 46.278 | 309 | 158 | 5 | 25 | 332 | 95 | 396 | 8.48e-86 | 265 |
MS.gene74553.t1 | MTR_5g014100 | 46.711 | 304 | 157 | 4 | 33 | 332 | 29 | 331 | 8.97e-86 | 263 |
MS.gene74553.t1 | MTR_5g074710 | 46.945 | 311 | 151 | 6 | 28 | 334 | 23 | 323 | 1.16e-85 | 262 |
MS.gene74553.t1 | MTR_5g074860 | 47.419 | 310 | 151 | 6 | 26 | 332 | 25 | 325 | 1.20e-85 | 262 |
MS.gene74553.t1 | MTR_5g083860 | 44.013 | 309 | 163 | 3 | 25 | 332 | 26 | 325 | 9.72e-85 | 259 |
MS.gene74553.t1 | MTR_4g031140 | 45.066 | 304 | 159 | 5 | 30 | 332 | 28 | 324 | 2.11e-84 | 259 |
MS.gene74553.t1 | MTR_3g467600 | 47.742 | 310 | 151 | 5 | 26 | 332 | 23 | 324 | 3.38e-84 | 258 |
MS.gene74553.t1 | MTR_4g029190 | 45.928 | 307 | 157 | 5 | 27 | 332 | 42 | 340 | 1.52e-83 | 257 |
MS.gene74553.t1 | MTR_2g088770 | 43.887 | 319 | 172 | 6 | 16 | 332 | 12 | 325 | 2.16e-82 | 254 |
MS.gene74553.t1 | MTR_3g466180 | 43.354 | 316 | 169 | 3 | 17 | 332 | 18 | 323 | 5.87e-82 | 252 |
MS.gene74553.t1 | MTR_4g046713 | 42.857 | 322 | 175 | 6 | 12 | 332 | 13 | 326 | 4.16e-80 | 248 |
MS.gene74553.t1 | MTR_4g074990 | 42.814 | 334 | 156 | 7 | 1 | 332 | 5 | 305 | 1.75e-79 | 245 |
MS.gene74553.t1 | MTR_4g133800 | 44.702 | 302 | 153 | 8 | 35 | 334 | 46 | 335 | 9.71e-79 | 244 |
MS.gene74553.t1 | MTR_4g114210 | 41.796 | 323 | 175 | 7 | 15 | 332 | 6 | 320 | 1.20e-78 | 244 |
MS.gene74553.t1 | MTR_7g107520 | 42.056 | 321 | 179 | 5 | 12 | 332 | 7 | 320 | 1.05e-77 | 241 |
MS.gene74553.t1 | MTR_1g115900 | 43.366 | 309 | 163 | 6 | 26 | 332 | 23 | 321 | 1.13e-77 | 241 |
MS.gene74553.t1 | MTR_1g101830 | 43.182 | 308 | 166 | 6 | 26 | 332 | 23 | 322 | 1.05e-75 | 236 |
MS.gene74553.t1 | MTR_2g008710 | 43.564 | 303 | 159 | 6 | 34 | 332 | 31 | 325 | 1.19e-75 | 236 |
MS.gene74553.t1 | MTR_3g092990 | 40.453 | 309 | 180 | 3 | 26 | 333 | 22 | 327 | 4.06e-75 | 235 |
MS.gene74553.t1 | MTR_3g072190 | 47.308 | 260 | 127 | 3 | 73 | 332 | 2 | 251 | 4.09e-75 | 232 |
MS.gene74553.t1 | MTR_8g075100 | 41.801 | 311 | 166 | 9 | 25 | 332 | 21 | 319 | 1.13e-74 | 234 |
MS.gene74553.t1 | MTR_7g026990 | 41.196 | 301 | 162 | 5 | 34 | 332 | 35 | 322 | 1.93e-73 | 231 |
MS.gene74553.t1 | MTR_5g016010 | 41.935 | 310 | 172 | 5 | 26 | 331 | 23 | 328 | 2.50e-73 | 230 |
MS.gene74553.t1 | MTR_6g043280 | 40.964 | 332 | 173 | 8 | 4 | 333 | 23 | 333 | 1.06e-72 | 229 |
MS.gene74553.t1 | MTR_2g437770 | 41.447 | 304 | 165 | 6 | 30 | 332 | 50 | 341 | 7.39e-72 | 227 |
MS.gene74553.t1 | MTR_0155s0040 | 39.869 | 306 | 170 | 7 | 27 | 332 | 24 | 315 | 1.07e-71 | 226 |
MS.gene74553.t1 | MTR_1g086320 | 39.744 | 312 | 183 | 3 | 24 | 332 | 24 | 333 | 1.33e-71 | 226 |
MS.gene74553.t1 | MTR_4g074980 | 41.566 | 332 | 152 | 9 | 1 | 332 | 5 | 294 | 1.90e-71 | 224 |
MS.gene74553.t1 | MTR_5g022870 | 40.453 | 309 | 173 | 8 | 25 | 332 | 18 | 316 | 2.73e-71 | 225 |
MS.gene74553.t1 | MTR_1g025980 | 40.594 | 303 | 172 | 5 | 30 | 332 | 24 | 318 | 5.59e-71 | 224 |
MS.gene74553.t1 | MTR_4g132490 | 38.554 | 332 | 195 | 5 | 5 | 332 | 1 | 327 | 5.84e-70 | 222 |
MS.gene74553.t1 | MTR_1g077000 | 39.604 | 303 | 169 | 5 | 30 | 332 | 39 | 327 | 1.20e-69 | 221 |
MS.gene74553.t1 | MTR_1g086490 | 38.941 | 321 | 184 | 4 | 24 | 334 | 24 | 342 | 1.62e-69 | 221 |
MS.gene74553.t1 | MTR_6g043240 | 43.137 | 306 | 155 | 9 | 30 | 332 | 42 | 331 | 4.47e-69 | 220 |
MS.gene74553.t1 | MTR_1g009750 | 40.391 | 307 | 176 | 4 | 29 | 332 | 26 | 328 | 4.61e-69 | 219 |
MS.gene74553.t1 | MTR_7g086820 | 39.088 | 307 | 173 | 6 | 28 | 332 | 18 | 312 | 6.27e-69 | 219 |
MS.gene74553.t1 | MTR_4g074980 | 44.697 | 264 | 129 | 5 | 1 | 262 | 5 | 253 | 2.29e-68 | 215 |
MS.gene74553.t1 | MTR_2g008160 | 41.026 | 312 | 171 | 8 | 26 | 332 | 20 | 323 | 2.95e-68 | 217 |
MS.gene74553.t1 | MTR_1g090760 | 36.873 | 339 | 202 | 5 | 1 | 334 | 1 | 332 | 4.67e-68 | 217 |
MS.gene74553.t1 | MTR_7g029030 | 42.038 | 314 | 163 | 8 | 25 | 332 | 20 | 320 | 5.10e-68 | 216 |
MS.gene74553.t1 | MTR_1g038680 | 38.816 | 304 | 177 | 5 | 34 | 332 | 33 | 332 | 6.22e-68 | 217 |
MS.gene74553.t1 | MTR_6g043460 | 41.860 | 301 | 161 | 6 | 30 | 328 | 36 | 324 | 7.85e-68 | 217 |
MS.gene74553.t1 | MTR_4g087965 | 39.344 | 305 | 179 | 4 | 29 | 329 | 41 | 343 | 1.66e-67 | 216 |
MS.gene74553.t1 | MTR_4g127670 | 42.763 | 304 | 163 | 5 | 29 | 328 | 23 | 319 | 1.44e-66 | 213 |
MS.gene74553.t1 | MTR_4g095450 | 41.935 | 310 | 167 | 6 | 23 | 328 | 20 | 320 | 1.57e-66 | 213 |
MS.gene74553.t1 | MTR_5g074860 | 40.645 | 310 | 133 | 5 | 26 | 332 | 25 | 286 | 5.50e-66 | 210 |
MS.gene74553.t1 | MTR_2g067440 | 37.607 | 351 | 180 | 8 | 16 | 331 | 40 | 386 | 2.66e-65 | 212 |
MS.gene74553.t1 | MTR_3g092990 | 38.188 | 309 | 176 | 4 | 26 | 333 | 22 | 316 | 1.22e-62 | 202 |
MS.gene74553.t1 | MTR_0147s0010 | 36.111 | 324 | 172 | 4 | 27 | 331 | 74 | 381 | 5.54e-61 | 200 |
MS.gene74553.t1 | MTR_1g009750 | 37.705 | 305 | 170 | 5 | 29 | 332 | 26 | 311 | 7.57e-61 | 197 |
MS.gene74553.t1 | MTR_7g086870 | 37.582 | 306 | 174 | 7 | 30 | 333 | 22 | 312 | 1.20e-60 | 197 |
MS.gene74553.t1 | MTR_8g062780 | 36.025 | 322 | 198 | 4 | 16 | 334 | 10 | 326 | 1.83e-60 | 197 |
MS.gene74553.t1 | MTR_2g077990 | 36.628 | 344 | 178 | 8 | 22 | 328 | 62 | 402 | 5.80e-60 | 198 |
MS.gene74553.t1 | MTR_6g027440 | 38.141 | 312 | 179 | 7 | 23 | 332 | 15 | 314 | 1.20e-59 | 195 |
MS.gene74553.t1 | MTR_2g078610 | 35.942 | 345 | 181 | 8 | 22 | 329 | 62 | 403 | 2.52e-59 | 197 |
MS.gene74553.t1 | MTR_2g099175 | 33.041 | 342 | 210 | 7 | 1 | 333 | 5 | 336 | 7.34e-59 | 193 |
MS.gene74553.t1 | MTR_5g033470 | 35.577 | 312 | 191 | 8 | 27 | 332 | 70 | 377 | 1.73e-58 | 194 |
MS.gene74553.t1 | MTR_0286s0010 | 33.866 | 313 | 193 | 5 | 26 | 332 | 30 | 334 | 1.68e-55 | 184 |
MS.gene74553.t1 | MTR_6g008075 | 33.866 | 313 | 193 | 5 | 26 | 332 | 30 | 334 | 1.68e-55 | 184 |
MS.gene74553.t1 | MTR_2g078280 | 35.714 | 336 | 172 | 8 | 22 | 318 | 62 | 392 | 1.94e-55 | 186 |
MS.gene74553.t1 | MTR_3g105790 | 36.825 | 315 | 190 | 4 | 22 | 334 | 17 | 324 | 1.85e-54 | 182 |
MS.gene74553.t1 | MTR_2g008730 | 37.624 | 303 | 153 | 6 | 34 | 332 | 31 | 301 | 4.20e-54 | 180 |
MS.gene74553.t1 | MTR_2g067450 | 38.111 | 307 | 181 | 6 | 28 | 331 | 9 | 309 | 7.81e-54 | 179 |
MS.gene74553.t1 | MTR_1g066380 | 34.202 | 307 | 192 | 4 | 28 | 332 | 25 | 323 | 3.63e-51 | 173 |
MS.gene74553.t1 | MTR_2g008160 | 35.897 | 312 | 152 | 8 | 26 | 332 | 20 | 288 | 3.88e-51 | 172 |
MS.gene74553.t1 | MTR_1g066640 | 34.416 | 308 | 192 | 4 | 27 | 332 | 24 | 323 | 9.85e-51 | 172 |
MS.gene74553.t1 | MTR_1g066710 | 33.766 | 308 | 194 | 4 | 27 | 332 | 24 | 323 | 1.48e-50 | 171 |
MS.gene74553.t1 | MTR_1g066680 | 34.416 | 308 | 191 | 5 | 27 | 332 | 24 | 322 | 9.04e-50 | 169 |
MS.gene74553.t1 | MTR_4g132110 | 33.993 | 303 | 190 | 4 | 33 | 333 | 35 | 329 | 9.35e-49 | 167 |
MS.gene74553.t1 | MTR_4g132110 | 33.333 | 309 | 189 | 6 | 33 | 333 | 35 | 334 | 3.48e-47 | 163 |
MS.gene74553.t1 | MTR_2g008160 | 45.977 | 174 | 90 | 3 | 26 | 199 | 20 | 189 | 2.24e-45 | 154 |
MS.gene74553.t1 | MTR_5g074700 | 40.851 | 235 | 113 | 6 | 103 | 334 | 5 | 216 | 2.50e-45 | 154 |
MS.gene74553.t1 | MTR_3g072210 | 45.312 | 192 | 95 | 5 | 142 | 332 | 56 | 238 | 1.26e-44 | 153 |
MS.gene74553.t1 | MTR_1g066380 | 35.249 | 261 | 159 | 4 | 74 | 332 | 3 | 255 | 1.74e-40 | 143 |
MS.gene74553.t1 | MTR_3g105790 | 37.500 | 240 | 145 | 3 | 97 | 334 | 12 | 248 | 2.38e-37 | 135 |
MS.gene74553.t1 | MTR_7g072490 | 38.000 | 250 | 91 | 4 | 76 | 325 | 2 | 187 | 2.39e-37 | 134 |
MS.gene74553.t1 | MTR_3g072260 | 53.636 | 110 | 51 | 0 | 29 | 138 | 25 | 134 | 1.55e-34 | 124 |
MS.gene74553.t1 | MTR_2g029930 | 54.955 | 111 | 22 | 3 | 16 | 112 | 5 | 101 | 4.93e-30 | 111 |
MS.gene74553.t1 | MTR_2g078560 | 31.579 | 228 | 120 | 5 | 136 | 331 | 96 | 319 | 5.51e-26 | 106 |
MS.gene74553.t1 | MTR_2g077980 | 31.655 | 278 | 143 | 10 | 92 | 329 | 11 | 281 | 5.61e-26 | 105 |
MS.gene74553.t1 | MTR_5g058120 | 38.415 | 164 | 87 | 3 | 165 | 328 | 6 | 155 | 6.90e-25 | 102 |
MS.gene74553.t1 | MTR_3g462850 | 37.762 | 143 | 85 | 4 | 194 | 333 | 9 | 150 | 2.71e-23 | 94.7 |
MS.gene74553.t1 | MTR_1g098320 | 50.000 | 82 | 39 | 1 | 251 | 332 | 45 | 124 | 1.23e-20 | 87.4 |
MS.gene74553.t1 | MTR_7g086790 | 30.688 | 189 | 108 | 4 | 77 | 265 | 17 | 182 | 1.44e-19 | 85.9 |
MS.gene74553.t1 | MTR_1g089005 | 38.793 | 116 | 64 | 2 | 30 | 139 | 15 | 129 | 1.15e-17 | 79.7 |
MS.gene74553.t1 | MTR_4g114220 | 49.367 | 79 | 30 | 2 | 56 | 134 | 29 | 97 | 9.19e-17 | 76.6 |
MS.gene74553.t1 | MTR_4g012865 | 45.070 | 71 | 39 | 0 | 27 | 97 | 74 | 144 | 1.66e-16 | 76.3 |
MS.gene74553.t1 | MTR_4g031040 | 33.523 | 176 | 72 | 4 | 89 | 264 | 1 | 131 | 1.07e-15 | 73.6 |
MS.gene74553.t1 | MTR_5g074770 | 42.529 | 87 | 49 | 1 | 245 | 331 | 23 | 108 | 1.56e-15 | 72.4 |
MS.gene74553.t1 | MTR_6g048160 | 49.315 | 73 | 33 | 2 | 69 | 141 | 22 | 90 | 5.01e-15 | 70.1 |
MS.gene74553.t1 | MTR_7g107500 | 46.053 | 76 | 38 | 2 | 257 | 332 | 25 | 97 | 9.03e-12 | 61.2 |
MS.gene74553.t1 | MTR_7g086810 | 30.579 | 121 | 58 | 1 | 28 | 148 | 4 | 98 | 1.19e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74553.t1 | AT5G06730 | 58.462 | 325 | 134 | 1 | 16 | 340 | 19 | 342 | 4.27e-130 | 376 |
MS.gene74553.t1 | AT5G06720 | 58.360 | 317 | 131 | 1 | 16 | 332 | 18 | 333 | 6.91e-126 | 365 |
MS.gene74553.t1 | AT2G38380 | 53.623 | 345 | 151 | 4 | 9 | 352 | 12 | 348 | 3.16e-124 | 361 |
MS.gene74553.t1 | AT3G32980 | 55.172 | 319 | 140 | 3 | 26 | 342 | 27 | 344 | 1.07e-117 | 345 |
MS.gene74553.t1 | AT2G38390 | 51.304 | 345 | 159 | 4 | 9 | 352 | 12 | 348 | 1.09e-117 | 344 |
MS.gene74553.t1 | AT3G49120 | 54.890 | 317 | 140 | 3 | 26 | 340 | 28 | 343 | 6.83e-117 | 343 |
MS.gene74553.t1 | AT3G49110 | 54.890 | 317 | 140 | 3 | 26 | 340 | 29 | 344 | 4.86e-116 | 340 |
MS.gene74553.t1 | AT4G08770 | 52.322 | 323 | 151 | 3 | 26 | 346 | 20 | 341 | 7.08e-116 | 340 |
MS.gene74553.t1 | AT4G08780 | 51.393 | 323 | 154 | 3 | 26 | 346 | 20 | 341 | 2.99e-113 | 333 |
MS.gene74553.t1 | AT5G66390 | 46.291 | 337 | 172 | 4 | 1 | 332 | 1 | 333 | 1.58e-100 | 300 |
MS.gene74553.t1 | AT2G18150 | 50.167 | 299 | 147 | 2 | 34 | 332 | 40 | 336 | 3.48e-100 | 300 |
MS.gene74553.t1 | AT4G36430 | 48.544 | 309 | 157 | 2 | 25 | 333 | 25 | 331 | 5.58e-99 | 296 |
MS.gene74553.t1 | AT5G19880 | 50.476 | 315 | 150 | 5 | 22 | 332 | 17 | 329 | 1.08e-98 | 295 |
MS.gene74553.t1 | AT2G18140 | 47.112 | 329 | 167 | 4 | 4 | 332 | 14 | 335 | 6.78e-98 | 293 |
MS.gene74553.t1 | AT3G50990 | 50.000 | 308 | 152 | 2 | 25 | 332 | 36 | 341 | 1.23e-96 | 291 |
MS.gene74553.t1 | AT5G19890 | 50.152 | 329 | 143 | 7 | 7 | 332 | 17 | 327 | 1.24e-96 | 290 |
MS.gene74553.t1 | AT1G44970 | 46.250 | 320 | 163 | 2 | 21 | 332 | 28 | 346 | 2.04e-95 | 288 |
MS.gene74553.t1 | AT5G05340 | 49.020 | 306 | 146 | 3 | 28 | 332 | 28 | 324 | 1.86e-94 | 285 |
MS.gene74553.t1 | AT1G49570 | 46.885 | 305 | 158 | 2 | 28 | 330 | 46 | 348 | 5.82e-94 | 284 |
MS.gene74553.t1 | AT1G14550 | 47.557 | 307 | 152 | 4 | 27 | 332 | 23 | 321 | 3.20e-92 | 278 |
MS.gene74553.t1 | AT1G68850 | 46.429 | 308 | 160 | 5 | 30 | 333 | 30 | 336 | 3.72e-92 | 279 |
MS.gene74553.t1 | AT1G14540 | 46.296 | 324 | 156 | 5 | 9 | 332 | 10 | 315 | 4.93e-88 | 268 |
MS.gene74553.t1 | AT4G16270 | 44.554 | 303 | 164 | 3 | 30 | 332 | 50 | 348 | 1.68e-87 | 268 |
MS.gene74553.t1 | AT1G71695 | 45.652 | 322 | 163 | 6 | 30 | 349 | 44 | 355 | 1.72e-85 | 263 |
MS.gene74553.t1 | AT5G58390 | 46.278 | 309 | 155 | 4 | 26 | 332 | 17 | 316 | 2.74e-85 | 261 |
MS.gene74553.t1 | AT2G22420 | 42.508 | 327 | 175 | 4 | 6 | 332 | 6 | 319 | 4.89e-83 | 255 |
MS.gene74553.t1 | AT2G35380 | 46.082 | 319 | 163 | 5 | 18 | 332 | 22 | 335 | 9.36e-83 | 255 |
MS.gene74553.t1 | AT5G58400 | 44.514 | 319 | 163 | 5 | 16 | 332 | 19 | 325 | 3.95e-81 | 250 |
MS.gene74553.t1 | AT2G41480 | 44.272 | 323 | 163 | 8 | 16 | 332 | 17 | 328 | 3.10e-80 | 248 |
MS.gene74553.t1 | AT1G05260 | 44.194 | 310 | 162 | 8 | 28 | 333 | 24 | 326 | 1.78e-79 | 246 |
MS.gene74553.t1 | AT3G21770 | 44.231 | 312 | 167 | 6 | 19 | 328 | 18 | 324 | 8.30e-79 | 244 |
MS.gene74553.t1 | AT4G11290 | 42.320 | 319 | 179 | 4 | 16 | 332 | 11 | 326 | 5.54e-78 | 242 |
MS.gene74553.t1 | AT5G17820 | 41.479 | 311 | 168 | 7 | 22 | 332 | 17 | 313 | 4.83e-76 | 237 |
MS.gene74553.t1 | AT5G15180 | 39.759 | 332 | 192 | 5 | 1 | 332 | 6 | 329 | 6.73e-75 | 234 |
MS.gene74553.t1 | AT3G03670 | 40.984 | 305 | 176 | 3 | 28 | 332 | 21 | 321 | 8.79e-75 | 234 |
MS.gene74553.t1 | AT5G17820 | 41.479 | 311 | 168 | 7 | 22 | 332 | 70 | 366 | 9.81e-75 | 235 |
MS.gene74553.t1 | AT5G51890 | 40.391 | 307 | 177 | 4 | 26 | 332 | 22 | 322 | 1.16e-74 | 234 |
MS.gene74553.t1 | AT5G64120 | 43.144 | 299 | 161 | 6 | 34 | 332 | 39 | 328 | 1.39e-74 | 234 |
MS.gene74553.t1 | AT2G18980 | 43.175 | 315 | 165 | 7 | 24 | 332 | 17 | 323 | 5.53e-73 | 229 |
MS.gene74553.t1 | AT3G01190 | 39.198 | 324 | 188 | 6 | 9 | 332 | 7 | 321 | 2.74e-72 | 228 |
MS.gene74553.t1 | AT4G25980 | 40.385 | 312 | 174 | 6 | 26 | 332 | 22 | 326 | 3.66e-72 | 228 |
MS.gene74553.t1 | AT4G37530 | 41.479 | 311 | 174 | 5 | 26 | 332 | 23 | 329 | 2.45e-71 | 225 |
MS.gene74553.t1 | AT4G30170 | 41.935 | 310 | 168 | 6 | 27 | 332 | 24 | 325 | 2.76e-71 | 225 |
MS.gene74553.t1 | AT5G64110 | 43.234 | 303 | 158 | 7 | 34 | 332 | 38 | 330 | 2.59e-70 | 223 |
MS.gene74553.t1 | AT5G67400 | 40.952 | 315 | 178 | 5 | 22 | 332 | 19 | 329 | 4.22e-70 | 222 |
MS.gene74553.t1 | AT5G14130 | 40.895 | 313 | 171 | 6 | 25 | 332 | 27 | 330 | 2.57e-69 | 220 |
MS.gene74553.t1 | AT1G05240 | 38.511 | 309 | 175 | 5 | 30 | 332 | 26 | 325 | 3.45e-69 | 220 |
MS.gene74553.t1 | AT1G05250 | 38.511 | 309 | 175 | 5 | 30 | 332 | 26 | 325 | 3.45e-69 | 220 |
MS.gene74553.t1 | AT5G14130 | 40.895 | 313 | 171 | 6 | 25 | 332 | 68 | 371 | 6.73e-69 | 220 |
MS.gene74553.t1 | AT5G39580 | 40.303 | 330 | 180 | 8 | 4 | 332 | 6 | 319 | 1.54e-67 | 215 |
MS.gene74553.t1 | AT5G42180 | 38.411 | 302 | 178 | 5 | 30 | 331 | 23 | 316 | 3.63e-66 | 212 |
MS.gene74553.t1 | AT3G49960 | 38.415 | 328 | 191 | 6 | 9 | 332 | 9 | 329 | 4.86e-65 | 209 |
MS.gene74553.t1 | AT4G33420 | 38.462 | 312 | 177 | 7 | 21 | 332 | 29 | 325 | 7.03e-65 | 209 |
MS.gene74553.t1 | AT4G33420 | 38.462 | 312 | 177 | 7 | 21 | 332 | 76 | 372 | 1.99e-64 | 209 |
MS.gene74553.t1 | AT4G37520 | 38.835 | 309 | 181 | 5 | 28 | 332 | 25 | 329 | 2.05e-64 | 207 |
MS.gene74553.t1 | AT4G26010 | 39.103 | 312 | 167 | 7 | 25 | 332 | 17 | 309 | 4.09e-64 | 206 |
MS.gene74553.t1 | AT4G26010 | 39.103 | 312 | 167 | 7 | 25 | 332 | 45 | 337 | 1.06e-63 | 206 |
MS.gene74553.t1 | AT4G33870 | 34.024 | 338 | 184 | 5 | 27 | 329 | 65 | 398 | 1.21e-63 | 208 |
MS.gene74553.t1 | AT1G77100 | 39.557 | 316 | 166 | 8 | 26 | 332 | 20 | 319 | 1.34e-63 | 205 |
MS.gene74553.t1 | AT2G34060 | 38.312 | 308 | 182 | 5 | 27 | 329 | 39 | 343 | 3.65e-63 | 205 |
MS.gene74553.t1 | AT4G37520 | 38.511 | 309 | 179 | 6 | 28 | 332 | 25 | 326 | 3.81e-63 | 204 |
MS.gene74553.t1 | AT5G64100 | 40.000 | 300 | 170 | 6 | 34 | 332 | 41 | 331 | 1.03e-62 | 203 |
MS.gene74553.t1 | AT5G24070 | 37.500 | 312 | 177 | 7 | 29 | 332 | 34 | 335 | 5.47e-62 | 202 |
MS.gene74553.t1 | AT2G35380 | 46.371 | 248 | 128 | 4 | 89 | 332 | 1 | 247 | 3.40e-61 | 197 |
MS.gene74553.t1 | AT2G39040 | 39.744 | 312 | 178 | 7 | 27 | 332 | 43 | 350 | 4.08e-61 | 200 |
MS.gene74553.t1 | AT5G40150 | 36.306 | 314 | 184 | 4 | 24 | 332 | 26 | 328 | 6.72e-61 | 198 |
MS.gene74553.t1 | AT3G28200 | 36.102 | 313 | 183 | 5 | 25 | 332 | 16 | 316 | 9.95e-61 | 197 |
MS.gene74553.t1 | AT4G37530 | 42.308 | 260 | 146 | 3 | 26 | 282 | 23 | 281 | 5.79e-60 | 194 |
MS.gene74553.t1 | AT4G17690 | 36.246 | 309 | 187 | 4 | 30 | 336 | 26 | 326 | 5.20e-59 | 194 |
MS.gene74553.t1 | AT1G30870 | 36.156 | 307 | 182 | 6 | 30 | 333 | 51 | 346 | 7.30e-58 | 191 |
MS.gene74553.t1 | AT4G31760 | 34.731 | 334 | 208 | 5 | 1 | 332 | 1 | 326 | 2.08e-57 | 189 |
MS.gene74553.t1 | AT2G24800 | 37.134 | 307 | 185 | 3 | 28 | 332 | 29 | 329 | 7.10e-57 | 188 |
MS.gene74553.t1 | AT5G47000 | 35.370 | 311 | 192 | 4 | 28 | 336 | 31 | 334 | 8.57e-57 | 188 |
MS.gene74553.t1 | AT2G43480 | 34.018 | 341 | 201 | 8 | 6 | 332 | 5 | 335 | 9.28e-57 | 188 |
MS.gene74553.t1 | AT1G24110 | 36.246 | 309 | 189 | 6 | 27 | 332 | 19 | 322 | 5.43e-56 | 186 |
MS.gene74553.t1 | AT5G22410 | 35.938 | 320 | 186 | 9 | 17 | 329 | 15 | 322 | 5.70e-56 | 186 |
MS.gene74553.t1 | AT1G34510 | 35.294 | 306 | 181 | 6 | 28 | 332 | 20 | 309 | 6.71e-55 | 182 |
MS.gene74553.t1 | AT3G17070 | 34.911 | 338 | 201 | 7 | 3 | 332 | 13 | 339 | 2.45e-53 | 179 |
MS.gene74553.t1 | AT4G21960 | 34.754 | 305 | 185 | 5 | 33 | 333 | 34 | 328 | 1.66e-51 | 174 |
MS.gene74553.t1 | AT2G37130 | 33.981 | 309 | 193 | 5 | 27 | 332 | 27 | 327 | 1.56e-48 | 166 |
MS.gene74553.t1 | AT2G37130 | 33.993 | 303 | 189 | 5 | 33 | 332 | 2 | 296 | 4.61e-47 | 162 |
MS.gene74553.t1 | AT4G25980 | 44.767 | 172 | 91 | 3 | 26 | 197 | 67 | 234 | 1.61e-43 | 152 |
MS.gene74553.t1 | AT5G39580 | 38.559 | 236 | 123 | 6 | 4 | 232 | 6 | 226 | 1.20e-38 | 138 |
MS.gene74553.t1 | AT3G17070 | 34.572 | 269 | 158 | 7 | 72 | 332 | 18 | 276 | 2.54e-37 | 135 |
MS.gene74553.t1 | AT2G24800 | 40.828 | 169 | 94 | 3 | 28 | 195 | 29 | 192 | 1.28e-32 | 122 |
Find 72 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGGATCTTGTTGCACTTTC+AGG | 0.138143 | 2.3:+59761805 | MS.gene74553:CDS |
CCTCTTATTGAGTTGTTATT+TGG | 0.142819 | 2.3:-59760590 | None:intergenic |
TAAGGCCTCCATGATTAAAA+TGG | 0.159041 | 2.3:+59762370 | MS.gene74553:CDS |
TGCTAATATTTCATCTGTTC+TGG | 0.254326 | 2.3:+59760697 | MS.gene74553:CDS |
ACCATCTTCTGATGAATCTT+TGG | 0.276196 | 2.3:-59762480 | None:intergenic |
ATGATTAAAATGGGTAATAT+TGG | 0.286583 | 2.3:+59762380 | MS.gene74553:CDS |
AGCTACCAACCTCACCAATT+TGG | 0.295237 | 2.3:+59762184 | MS.gene74553:CDS |
AAACTATCTCTTCTTCCTAA+TGG | 0.298706 | 2.3:-59761685 | None:intergenic |
ATAATCGATCAACGAATAAA+AGG | 0.305907 | 2.3:-59762070 | None:intergenic |
CGCAGGCTCTTGGTCCTGAT+TGG | 0.312320 | 2.3:+59761656 | MS.gene74553:intron |
GTAGCTTGATTGCCAATATC+AGG | 0.313736 | 2.3:-59762167 | None:intergenic |
CCAAATAACAACTCAATAAG+AGG | 0.334119 | 2.3:+59760590 | MS.gene74553:CDS |
GTATGCTTGCCAGTTTCATT+AGG | 0.349331 | 2.3:+59760213 | MS.gene74553:CDS |
ACTTGATGCTAACTTCTATA+AGG | 0.356786 | 2.3:+59760124 | MS.gene74553:CDS |
CGAGCAATATGCCCTGATAT+TGG | 0.357897 | 2.3:+59762155 | MS.gene74553:CDS |
TTAATTCAGTAAGATTAAAT+CGG | 0.360125 | 2.3:-59761750 | None:intergenic |
GGTAATATTGGAGTGTTAAC+TGG | 0.369290 | 2.3:+59762392 | MS.gene74553:CDS |
AAAACCTCATTTCTTAATCA+AGG | 0.380354 | 2.3:+59761772 | MS.gene74553:CDS |
CTTGCTAATTCAAACCTTCC+TGG | 0.385977 | 2.3:+59761724 | MS.gene74553:CDS |
TGAACAATGGAAGTGACATT+TGG | 0.393841 | 2.3:-59760155 | None:intergenic |
TGCTGTGGAGTGGTTGTGCT+TGG | 0.394687 | 2.3:+59760074 | MS.gene74553:CDS |
TCGAATCTCCAAGTTGGAAA+TGG | 0.398140 | 2.3:+59762245 | MS.gene74553:CDS |
TAACAACTCAATAAGAGGTT+TGG | 0.401893 | 2.3:+59760595 | MS.gene74553:CDS |
AAAGTGAAGCCTAATGAAAC+TGG | 0.404928 | 2.3:-59760222 | None:intergenic |
GCAGGCTCTTGGTCCTGATT+GGG | 0.406274 | 2.3:+59761657 | MS.gene74553:intron |
TAGTTTGAGTCGAATGCATC+GGG | 0.422778 | 2.3:-59762218 | None:intergenic |
CCTGATTGGGAAGTTCCATT+AGG | 0.430222 | 2.3:+59761670 | MS.gene74553:CDS |
TAATTCAGTAAGATTAAATC+GGG | 0.430892 | 2.3:-59761749 | None:intergenic |
GTTGTGTTAAGAGTTGGATC+TGG | 0.434465 | 2.3:-59762116 | None:intergenic |
AAGGCCTCCATGATTAAAAT+GGG | 0.443699 | 2.3:+59762371 | MS.gene74553:CDS |
GAAACAAACCATTTCCAACT+TGG | 0.447818 | 2.3:-59762253 | None:intergenic |
CCTAATGGAACTTCCCAATC+AGG | 0.449764 | 2.3:-59761670 | None:intergenic |
AGTAAGGTTGTGTTAAGAGT+TGG | 0.451448 | 2.3:-59762122 | None:intergenic |
TGATGAATCTTTGGTGACTT+TGG | 0.453307 | 2.3:-59762471 | None:intergenic |
TGACCTAATTCGCAGGCTCT+TGG | 0.463579 | 2.3:+59761646 | MS.gene74553:intron |
TGCTCGCAATGATTGTAGTA+AGG | 0.467866 | 2.3:-59762138 | None:intergenic |
TGTGGAGTGGTTGTGCTTGG+AGG | 0.468493 | 2.3:+59760077 | MS.gene74553:CDS |
TGTGCTGATATTCTTGCACT+TGG | 0.484999 | 2.3:+59760674 | MS.gene74553:CDS |
TTGTGTTAAGAGTTGGATCT+GGG | 0.485792 | 2.3:-59762115 | None:intergenic |
GTGGAGTGGTTGTGCTTGGA+GGG | 0.490901 | 2.3:+59760078 | MS.gene74553:CDS |
AAAGCTATTGACAATGTCAA+TGG | 0.511312 | 2.3:-59762315 | None:intergenic |
TACGTCCAAATTGGTGAGGT+TGG | 0.516617 | 2.3:-59762189 | None:intergenic |
CTTTGGTGACTTTGGTAGCA+AGG | 0.519220 | 2.3:-59762463 | None:intergenic |
ACATTGGCAGCTTTGTGCTG+TGG | 0.537023 | 2.3:+59760059 | MS.gene74553:CDS |
AATGGTATCAGCACCAGTTG+TGG | 0.543672 | 2.3:-59762297 | None:intergenic |
AAGTTGTGCATTTGAAGAGA+AGG | 0.544272 | 2.3:-59760105 | None:intergenic |
AGTTGTGCATTTGAAGAGAA+GGG | 0.549134 | 2.3:-59760104 | None:intergenic |
ACCAAAGATTCATCAGAAGA+TGG | 0.551368 | 2.3:+59762479 | MS.gene74553:CDS |
GGTGCTCATACGATTGGAAG+AGG | 0.553044 | 2.3:+59762041 | MS.gene74553:intron |
TACTACTCGAATCTCCAAGT+TGG | 0.554326 | 2.3:+59762239 | MS.gene74553:CDS |
GGCAGCTTTGTGCTGTGGAG+TGG | 0.561008 | 2.3:+59760064 | MS.gene74553:CDS |
TGTTTATGAAAGGGTTGTGA+TGG | 0.564252 | 2.3:+59760515 | MS.gene74553:intron |
GATACTATCGTGAGTGAGCA+AGG | 0.565390 | 2.3:+59760560 | MS.gene74553:CDS |
GTAAGATTAAATCGGGGACC+AGG | 0.567908 | 2.3:-59761742 | None:intergenic |
GAGACCTTGATTAAGAAATG+AGG | 0.572243 | 2.3:-59761776 | None:intergenic |
ATGAAACTGGCAAGCATACG+AGG | 0.572572 | 2.3:-59760209 | None:intergenic |
GTAGTTTGAGTCGAATGCAT+CGG | 0.574576 | 2.3:-59762219 | None:intergenic |
TGCTAAGACACTTTGAACAA+TGG | 0.585377 | 2.3:-59760168 | None:intergenic |
TGCTTACGTCCAAATTGGTG+AGG | 0.594113 | 2.3:-59762193 | None:intergenic |
TAGCTTGATTGCCAATATCA+GGG | 0.597537 | 2.3:-59762166 | None:intergenic |
TAATCAAGGTCTCGACACTA+CGG | 0.598064 | 2.3:+59761786 | MS.gene74553:CDS |
GGAGTGTTAACTGGTACTCA+AGG | 0.602686 | 2.3:+59762401 | MS.gene74553:CDS |
GATTAAATCGGGGACCAGGA+AGG | 0.614479 | 2.3:-59761738 | None:intergenic |
TTATACAATTTCAGCAACAC+AGG | 0.626417 | 2.3:+59762089 | MS.gene74553:CDS |
TCAGCACAAGACACAACACT+AGG | 0.664175 | 2.3:-59760659 | None:intergenic |
TGAAACTGGCAAGCATACGA+GGG | 0.671256 | 2.3:-59760208 | None:intergenic |
GTTTGAGTCGAATGCATCGG+GGG | 0.672996 | 2.3:-59762216 | None:intergenic |
TGTGTTAAGAGTTGGATCTG+GGG | 0.681511 | 2.3:-59762114 | None:intergenic |
AATTCAGTAAGATTAAATCG+GGG | 0.694375 | 2.3:-59761748 | None:intergenic |
TGTGAATCAAATCAAAGCCG+CGG | 0.705504 | 2.3:+59760622 | MS.gene74553:CDS |
AGGACAAGCAAGTTCGACCG+CGG | 0.728527 | 2.3:-59760639 | None:intergenic |
AGTTTGAGTCGAATGCATCG+GGG | 0.731684 | 2.3:-59762217 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATATTATTATTTAA+AGG | + | chr2.3:59761278-59761297 | MS.gene74553:intron | 0.0% |
!! | AAATAAAACAAAATAACTTA+AGG | - | chr2.3:59761354-59761373 | None:intergenic | 10.0% |
!! | TATAAAAGATCTAATTAATT+TGG | - | chr2.3:59760426-59760445 | None:intergenic | 10.0% |
!! | TTAAAAATAGTATATTTACA+AGG | - | chr2.3:59761382-59761401 | None:intergenic | 10.0% |
!!! | ATAATATGAATAAATTTTGT+TGG | - | chr2.3:59761433-59761452 | None:intergenic | 10.0% |
!!! | TAATATGAATAAATTTTGTT+GGG | - | chr2.3:59761432-59761451 | None:intergenic | 10.0% |
!! | TATTAAAAGGAATTAAACAA+AGG | - | chr2.3:59761517-59761536 | None:intergenic | 15.0% |
!! | TTAATTCAGTAAGATTAAAT+CGG | - | chr2.3:59761753-59761772 | None:intergenic | 15.0% |
!! | TTTAGATATTTATCAACAAA+AGG | - | chr2.3:59760884-59760903 | None:intergenic | 15.0% |
!!! | ATTAAATTTTGTAAGTAGAA+AGG | - | chr2.3:59760853-59760872 | None:intergenic | 15.0% |
!!! | TTTGTTGATAAATATCTAAA+GGG | + | chr2.3:59760884-59760903 | MS.gene74553:intron | 15.0% |
!!! | TTTTAAAATTAACAGAAACA+TGG | - | chr2.3:59760989-59761008 | None:intergenic | 15.0% |
!!! | TTTTGTTGATAAATATCTAA+AGG | + | chr2.3:59760883-59760902 | MS.gene74553:intron | 15.0% |
!! | ACAGTTATTATTGAAACTTA+TGG | - | chr2.3:59760779-59760798 | None:intergenic | 20.0% |
!! | AGGAAATATGAATATATAGA+GGG | - | chr2.3:59760734-59760753 | None:intergenic | 20.0% |
!! | ATGATTAAAATGGGTAATAT+TGG | + | chr2.3:59762380-59762399 | MS.gene74553:CDS | 20.0% |
!! | ATTTGGCATAGTTAAATTTA+CGG | - | chr2.3:59760409-59760428 | None:intergenic | 20.0% |
!! | CTTGATTATAAAATCAAAGA+TGG | - | chr2.3:59761210-59761229 | None:intergenic | 20.0% |
!! | GGGAATAAAACAAAATAATA+AGG | - | chr2.3:59761412-59761431 | None:intergenic | 20.0% |
!! | TAAAGGTTTAAATATCCAAA+TGG | + | chr2.3:59761295-59761314 | MS.gene74553:intron | 20.0% |
!! | TAATTCAGTAAGATTAAATC+GGG | - | chr2.3:59761752-59761771 | None:intergenic | 20.0% |
!! | TAGGAAATATGAATATATAG+AGG | - | chr2.3:59760735-59760754 | None:intergenic | 20.0% |
!! | TGATATCTATGTTTATGAAA+GGG | + | chr2.3:59760506-59760525 | MS.gene74553:intron | 20.0% |
!! | TTGATATCTATGTTTATGAA+AGG | + | chr2.3:59760505-59760524 | MS.gene74553:intron | 20.0% |
!!! | AATATTACCCATTTTAATCA+TGG | - | chr2.3:59762381-59762400 | None:intergenic | 20.0% |
!!! | ATATGCTTTGATCATTTTTT+AGG | + | chr2.3:59762020-59762039 | MS.gene74553:intron | 20.0% |
!!! | CATCTTTGATTTTATAATCA+AGG | + | chr2.3:59761208-59761227 | MS.gene74553:intron | 20.0% |
!!! | TAAACAAAGGCATTTTTTAA+AGG | - | chr2.3:59761504-59761523 | None:intergenic | 20.0% |
!!! | TGATTTTATAATCAAGGATT+GGG | + | chr2.3:59761214-59761233 | MS.gene74553:intron | 20.0% |
!!! | TTGATTTTATAATCAAGGAT+TGG | + | chr2.3:59761213-59761232 | MS.gene74553:intron | 20.0% |
! | AAAACCTCATTTCTTAATCA+AGG | + | chr2.3:59761772-59761791 | MS.gene74553:CDS | 25.0% |
! | AATTCAGTAAGATTAAATCG+GGG | - | chr2.3:59761751-59761770 | None:intergenic | 25.0% |
! | ATAATCGATCAACGAATAAA+AGG | - | chr2.3:59762073-59762092 | None:intergenic | 25.0% |
! | ATTATAAAATCAAAGATGGC+CGG | - | chr2.3:59761206-59761225 | None:intergenic | 25.0% |
!! | AAAACAAGCTTTAACATATG+TGG | + | chr2.3:59760804-59760823 | MS.gene74553:intron | 25.0% |
!! | AAATGTCCACATGATTTTTA+AGG | - | chr2.3:59761902-59761921 | None:intergenic | 25.0% |
!! | GTGTACATATGTAGTTTTTA+AGG | - | chr2.3:59761846-59761865 | None:intergenic | 25.0% |
!!! | ATTTTTAAGGACACACATAT+AGG | - | chr2.3:59761889-59761908 | None:intergenic | 25.0% |
!!! | TCTTTTCTTTGAAGCTTTTA+AGG | + | chr2.3:59762352-59762371 | MS.gene74553:CDS | 25.0% |
AAACTATCTCTTCTTCCTAA+TGG | - | chr2.3:59761688-59761707 | None:intergenic | 30.0% | |
AAAGCTATTGACAATGTCAA+TGG | - | chr2.3:59762318-59762337 | None:intergenic | 30.0% | |
ACTCATTATGTAGGTATACT+CGG | + | chr2.3:59761986-59762005 | MS.gene74553:intron | 30.0% | |
ACTTGATGCTAACTTCTATA+AGG | + | chr2.3:59760124-59760143 | MS.gene74553:CDS | 30.0% | |
ATATGAATATATAGAGGGTG+TGG | - | chr2.3:59760729-59760748 | None:intergenic | 30.0% | |
CCAAATAACAACTCAATAAG+AGG | + | chr2.3:59760590-59760609 | MS.gene74553:CDS | 30.0% | |
CTCTCAAGATAAAGTCTAAT+AGG | + | chr2.3:59761463-59761482 | MS.gene74553:intron | 30.0% | |
GAGCTAATAACTCATTATGT+AGG | + | chr2.3:59761977-59761996 | MS.gene74553:intron | 30.0% | |
TAAAGAAAGAACAATGAGCA+TGG | - | chr2.3:59760944-59760963 | None:intergenic | 30.0% | |
TAACAACTCAATAAGAGGTT+TGG | + | chr2.3:59760595-59760614 | MS.gene74553:CDS | 30.0% | |
TCCAAAACTTAGTTAGATGT+TGG | - | chr2.3:59760467-59760486 | None:intergenic | 30.0% | |
TGCTAATATTTCATCTGTTC+TGG | + | chr2.3:59760697-59760716 | MS.gene74553:CDS | 30.0% | |
TTATACAATTTCAGCAACAC+AGG | + | chr2.3:59762089-59762108 | MS.gene74553:CDS | 30.0% | |
! | ACCAACATCTAACTAAGTTT+TGG | + | chr2.3:59760463-59760482 | MS.gene74553:intron | 30.0% |
! | CCTCTTATTGAGTTGTTATT+TGG | - | chr2.3:59760593-59760612 | None:intergenic | 30.0% |
!! | ATTACCCATTTTAATCATGG+AGG | - | chr2.3:59762378-59762397 | None:intergenic | 30.0% |
!! | GAAACTTTCTAGCTACTAAT+CGG | - | chr2.3:59761247-59761266 | None:intergenic | 30.0% |
!! | TACTTGTGTTTCATTTTTCC+TGG | + | chr2.3:59761623-59761642 | MS.gene74553:intron | 30.0% |
AAAGTGAAGCCTAATGAAAC+TGG | - | chr2.3:59760225-59760244 | None:intergenic | 35.0% | |
AAGGCCTCCATGATTAAAAT+GGG | + | chr2.3:59762371-59762390 | MS.gene74553:CDS | 35.0% | |
AAGTTGTGCATTTGAAGAGA+AGG | - | chr2.3:59760108-59760127 | None:intergenic | 35.0% | |
ACCAAAGATTCATCAGAAGA+TGG | + | chr2.3:59762479-59762498 | MS.gene74553:CDS | 35.0% | |
ACCATCTTCTGATGAATCTT+TGG | - | chr2.3:59762483-59762502 | None:intergenic | 35.0% | |
AGTAAGGTTGTGTTAAGAGT+TGG | - | chr2.3:59762125-59762144 | None:intergenic | 35.0% | |
AGTTGTGCATTTGAAGAGAA+GGG | - | chr2.3:59760107-59760126 | None:intergenic | 35.0% | |
AGTTTAAATCTCCTCGGAAA+TGG | - | chr2.3:59761930-59761949 | None:intergenic | 35.0% | |
GAAACAAACCATTTCCAACT+TGG | - | chr2.3:59762256-59762275 | None:intergenic | 35.0% | |
GAGACCTTGATTAAGAAATG+AGG | - | chr2.3:59761779-59761798 | None:intergenic | 35.0% | |
GTGTGTCCTTAAAAATCATG+TGG | + | chr2.3:59761893-59761912 | MS.gene74553:intron | 35.0% | |
TAAGGCCTCCATGATTAAAA+TGG | + | chr2.3:59762370-59762389 | MS.gene74553:CDS | 35.0% | |
TAGCTTGATTGCCAATATCA+GGG | - | chr2.3:59762169-59762188 | None:intergenic | 35.0% | |
TCAAAACCATTGACATTTGC+AGG | - | chr2.3:59761323-59761342 | None:intergenic | 35.0% | |
TCGTCTTAGGAATGAGATAT+AGG | - | chr2.3:59760754-59760773 | None:intergenic | 35.0% | |
TCTCATGTGGCAAGAAAAAA+AGG | - | chr2.3:59760830-59760849 | None:intergenic | 35.0% | |
TGAACAATGGAAGTGACATT+TGG | - | chr2.3:59760158-59760177 | None:intergenic | 35.0% | |
TGATTCTATCAAACTCGTTG+TGG | - | chr2.3:59760313-59760332 | None:intergenic | 35.0% | |
TGCTAAGACACTTTGAACAA+TGG | - | chr2.3:59760171-59760190 | None:intergenic | 35.0% | |
TGTTTATGAAAGGGTTGTGA+TGG | + | chr2.3:59760515-59760534 | MS.gene74553:intron | 35.0% | |
TTGTGTTAAGAGTTGGATCT+GGG | - | chr2.3:59762118-59762137 | None:intergenic | 35.0% | |
! | ACATTTTACAACCATTTCCG+AGG | + | chr2.3:59761916-59761935 | MS.gene74553:intron | 35.0% |
! | CTCTTCTTTTCATCTCACAT+TGG | + | chr2.3:59760043-59760062 | MS.gene74553:CDS | 35.0% |
! | GGTAATATTGGAGTGTTAAC+TGG | + | chr2.3:59762392-59762411 | MS.gene74553:CDS | 35.0% |
! | TAATAGTCTTACGTACCGTT+AGG | + | chr2.3:59760914-59760933 | MS.gene74553:intron | 35.0% |
! | TGATGAATCTTTGGTGACTT+TGG | - | chr2.3:59762474-59762493 | None:intergenic | 35.0% |
!!! | TTTTTAGGTGCTCATACGAT+TGG | + | chr2.3:59762035-59762054 | MS.gene74553:intron | 35.0% |
AATGAGCATGGTTGACCTAA+CGG | - | chr2.3:59760932-59760951 | None:intergenic | 40.0% | |
ACCTCGAGTTTAAATCTCCT+CGG | - | chr2.3:59761936-59761955 | None:intergenic | 40.0% | |
AGCAATGAAAGTCTCTTAGC+CGG | + | chr2.3:59761184-59761203 | MS.gene74553:intron | 40.0% | |
ATGGTACCTGCAAATGTCAA+TGG | + | chr2.3:59761314-59761333 | MS.gene74553:intron | 40.0% | |
CTTGCTAATTCAAACCTTCC+TGG | + | chr2.3:59761724-59761743 | MS.gene74553:CDS | 40.0% | |
GAAACTTATGGAGTCGTCTT+AGG | - | chr2.3:59760767-59760786 | None:intergenic | 40.0% | |
GTAAGTAGAAAGGTCTCATG+TGG | - | chr2.3:59760843-59760862 | None:intergenic | 40.0% | |
GTAGCTTGATTGCCAATATC+AGG | - | chr2.3:59762170-59762189 | None:intergenic | 40.0% | |
GTAGTTTGAGTCGAATGCAT+CGG | - | chr2.3:59762222-59762241 | None:intergenic | 40.0% | |
GTATGCTTGCCAGTTTCATT+AGG | + | chr2.3:59760213-59760232 | MS.gene74553:CDS | 40.0% | |
GTTGTGTTAAGAGTTGGATC+TGG | - | chr2.3:59762119-59762138 | None:intergenic | 40.0% | |
TAATCAAGGTCTCGACACTA+CGG | + | chr2.3:59761786-59761805 | MS.gene74553:CDS | 40.0% | |
TACTACTCGAATCTCCAAGT+TGG | + | chr2.3:59762239-59762258 | MS.gene74553:CDS | 40.0% | |
TAGTTTGAGTCGAATGCATC+GGG | - | chr2.3:59762221-59762240 | None:intergenic | 40.0% | |
TGACATTTGCAGGTACCATT+TGG | - | chr2.3:59761313-59761332 | None:intergenic | 40.0% | |
TGCTCGCAATGATTGTAGTA+AGG | - | chr2.3:59762141-59762160 | None:intergenic | 40.0% | |
TGTGAATCAAATCAAAGCCG+CGG | + | chr2.3:59760622-59760641 | MS.gene74553:CDS | 40.0% | |
TGTGTTAAGAGTTGGATCTG+GGG | - | chr2.3:59762117-59762136 | None:intergenic | 40.0% | |
! | TCGAATCTCCAAGTTGGAAA+TGG | + | chr2.3:59762245-59762264 | MS.gene74553:CDS | 40.0% |
! | TGTGCTGATATTCTTGCACT+TGG | + | chr2.3:59760674-59760693 | MS.gene74553:CDS | 40.0% |
!! | CTTTCTAGCTACTAATCGGA+TGG | - | chr2.3:59761243-59761262 | None:intergenic | 40.0% |
!!! | CAAGAGCTTTTTTCCACAAC+TGG | + | chr2.3:59762284-59762303 | MS.gene74553:CDS | 40.0% |
AATGGTATCAGCACCAGTTG+TGG | - | chr2.3:59762300-59762319 | None:intergenic | 45.0% | |
ACGGATCTTGTTGCACTTTC+AGG | + | chr2.3:59761805-59761824 | MS.gene74553:CDS | 45.0% | |
AGCTACCAACCTCACCAATT+TGG | + | chr2.3:59762184-59762203 | MS.gene74553:CDS | 45.0% | |
AGTTTGAGTCGAATGCATCG+GGG | - | chr2.3:59762220-59762239 | None:intergenic | 45.0% | |
ATGAAACTGGCAAGCATACG+AGG | - | chr2.3:59760212-59760231 | None:intergenic | 45.0% | |
CCTAATGGAACTTCCCAATC+AGG | - | chr2.3:59761673-59761692 | None:intergenic | 45.0% | |
CCTGATTGGGAAGTTCCATT+AGG | + | chr2.3:59761670-59761689 | MS.gene74553:CDS | 45.0% | |
CGAGCAATATGCCCTGATAT+TGG | + | chr2.3:59762155-59762174 | MS.gene74553:CDS | 45.0% | |
GATACTATCGTGAGTGAGCA+AGG | + | chr2.3:59760560-59760579 | MS.gene74553:CDS | 45.0% | |
GTAAGATTAAATCGGGGACC+AGG | - | chr2.3:59761745-59761764 | None:intergenic | 45.0% | |
TACGTCCAAATTGGTGAGGT+TGG | - | chr2.3:59762192-59762211 | None:intergenic | 45.0% | |
TCAGCACAAGACACAACACT+AGG | - | chr2.3:59760662-59760681 | None:intergenic | 45.0% | |
TCCGAGGAGATTTAAACTCG+AGG | + | chr2.3:59761932-59761951 | MS.gene74553:intron | 45.0% | |
TGAAACTGGCAAGCATACGA+GGG | - | chr2.3:59760211-59760230 | None:intergenic | 45.0% | |
TGCTTACGTCCAAATTGGTG+AGG | - | chr2.3:59762196-59762215 | None:intergenic | 45.0% | |
! | CTTTGGTGACTTTGGTAGCA+AGG | - | chr2.3:59762466-59762485 | None:intergenic | 45.0% |
! | GGAGTGTTAACTGGTACTCA+AGG | + | chr2.3:59762401-59762420 | MS.gene74553:CDS | 45.0% |
!! | AAAAAAAATAGTTTATTAAA+AGG | - | chr2.3:59761530-59761549 | None:intergenic | 5.0% |
!!! | AATAATATATTTTTCTATTT+AGG | - | chr2.3:59761272-59761291 | None:intergenic | 5.0% |
GATTAAATCGGGGACCAGGA+AGG | - | chr2.3:59761741-59761760 | None:intergenic | 50.0% | |
GGTGCTCATACGATTGGAAG+AGG | + | chr2.3:59762041-59762060 | MS.gene74553:intron | 50.0% | |
GTTTGAGTCGAATGCATCGG+GGG | - | chr2.3:59762219-59762238 | None:intergenic | 50.0% | |
TCGAACCTGCGCACTATTCT+AGG | + | chr2.3:59761111-59761130 | MS.gene74553:intron | 50.0% | |
TCTCTCCTAGAATAGTGCGC+AGG | - | chr2.3:59761119-59761138 | None:intergenic | 50.0% | |
TGACCTAATTCGCAGGCTCT+TGG | + | chr2.3:59761646-59761665 | MS.gene74553:intron | 50.0% | |
TTCCTGGTGACCTAATTCGC+AGG | + | chr2.3:59761639-59761658 | MS.gene74553:intron | 50.0% | |
! | ACATTGGCAGCTTTGTGCTG+TGG | + | chr2.3:59760059-59760078 | MS.gene74553:CDS | 50.0% |
AGCCTGCGAATTAGGTCACC+AGG | - | chr2.3:59761644-59761663 | None:intergenic | 55.0% | |
AGGACAAGCAAGTTCGACCG+CGG | - | chr2.3:59760642-59760661 | None:intergenic | 55.0% | |
GCAGGCTCTTGGTCCTGATT+GGG | + | chr2.3:59761657-59761676 | MS.gene74553:intron | 55.0% | |
GGACCAAGAGCCTGCGAATT+AGG | - | chr2.3:59761652-59761671 | None:intergenic | 55.0% | |
GTGGAGTGGTTGTGCTTGGA+GGG | + | chr2.3:59760078-59760097 | MS.gene74553:CDS | 55.0% | |
TGCTGTGGAGTGGTTGTGCT+TGG | + | chr2.3:59760074-59760093 | MS.gene74553:CDS | 55.0% | |
TGTGGAGTGGTTGTGCTTGG+AGG | + | chr2.3:59760077-59760096 | MS.gene74553:CDS | 55.0% | |
!! | GGGGGTGCTTACGTCCAAAT+TGG | - | chr2.3:59762201-59762220 | None:intergenic | 55.0% |
CGCAGGCTCTTGGTCCTGAT+TGG | + | chr2.3:59761656-59761675 | MS.gene74553:intron | 60.0% | |
! | GGCAGCTTTGTGCTGTGGAG+TGG | + | chr2.3:59760064-59760083 | MS.gene74553:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 59760038 | 59762520 | 59760038 | ID=MS.gene74553 |
chr2.3 | mRNA | 59760038 | 59762520 | 59760038 | ID=MS.gene74553.t1;Parent=MS.gene74553 |
chr2.3 | exon | 59760038 | 59760262 | 59760038 | ID=MS.gene74553.t1.exon1;Parent=MS.gene74553.t1 |
chr2.3 | CDS | 59760038 | 59760262 | 59760038 | ID=cds.MS.gene74553.t1;Parent=MS.gene74553.t1 |
chr2.3 | exon | 59760527 | 59760718 | 59760527 | ID=MS.gene74553.t1.exon2;Parent=MS.gene74553.t1 |
chr2.3 | CDS | 59760527 | 59760718 | 59760527 | ID=cds.MS.gene74553.t1;Parent=MS.gene74553.t1 |
chr2.3 | exon | 59761661 | 59761826 | 59761661 | ID=MS.gene74553.t1.exon3;Parent=MS.gene74553.t1 |
chr2.3 | CDS | 59761661 | 59761826 | 59761661 | ID=cds.MS.gene74553.t1;Parent=MS.gene74553.t1 |
chr2.3 | exon | 59762042 | 59762520 | 59762042 | ID=MS.gene74553.t1.exon4;Parent=MS.gene74553.t1 |
chr2.3 | CDS | 59762042 | 59762520 | 59762042 | ID=cds.MS.gene74553.t1;Parent=MS.gene74553.t1 |
Gene Sequence |
Protein sequence |