AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003287

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003287.t1 MTR_2g029860 96.884 353 11 0 1 353 1 353 0.0 694
MS.gene003287.t1 MTR_2g029850 78.814 354 72 3 1 353 1 352 0.0 550
MS.gene003287.t1 MTR_2g029820 71.148 357 97 5 1 353 1 355 0.0 507
MS.gene003287.t1 MTR_2g029815 69.774 354 104 3 1 353 1 352 2.41e-176 493
MS.gene003287.t1 MTR_2g029910 72.000 350 93 4 6 353 7 353 1.49e-175 491
MS.gene003287.t1 MTR_2g029800 68.644 354 109 2 1 353 1 353 1.01e-174 489
MS.gene003287.t1 MTR_2g029830 68.857 350 105 3 6 351 4 353 5.94e-170 477
MS.gene003287.t1 MTR_2g028980 66.761 355 114 3 1 352 1 354 2.77e-166 468
MS.gene003287.t1 MTR_2g029740 66.479 355 115 3 1 352 1 354 4.86e-165 465
MS.gene003287.t1 MTR_2g029750 65.634 355 119 3 1 353 1 354 3.73e-163 460
MS.gene003287.t1 MTR_2g029560 61.756 353 126 2 1 353 1 344 2.24e-150 427
MS.gene003287.t1 MTR_2g029730 62.428 346 121 2 8 353 9 345 7.23e-147 418
MS.gene003287.t1 MTR_2g029830 71.530 281 77 2 74 351 5 285 4.07e-142 404
MS.gene003287.t1 MTR_7g093370 59.317 322 127 2 11 331 54 372 2.89e-132 382
MS.gene003287.t1 MTR_1g054205 58.716 327 133 2 6 331 2 327 1.20e-128 372
MS.gene003287.t1 MTR_4g125940 50.769 325 153 3 11 330 7 329 1.59e-101 303
MS.gene003287.t1 MTR_2g040000 47.748 333 169 2 1 330 1 331 6.96e-101 301
MS.gene003287.t1 MTR_7g072510 47.003 317 159 2 14 330 5 312 4.42e-100 298
MS.gene003287.t1 MTR_5g021060 47.352 321 162 2 10 330 17 330 4.92e-100 299
MS.gene003287.t1 MTR_8g076820 49.338 302 152 1 29 330 30 330 5.14e-100 299
MS.gene003287.t1 MTR_3g094650 50.450 333 151 5 1 330 1 322 6.14e-99 296
MS.gene003287.t1 MTR_5g017850 47.484 318 163 3 14 330 12 326 1.95e-97 292
MS.gene003287.t1 MTR_4g083710 48.640 331 157 5 6 330 1 324 6.37e-97 291
MS.gene003287.t1 MTR_5g017860 47.484 318 163 3 14 330 12 326 1.11e-95 288
MS.gene003287.t1 MTR_3g466200 48.438 320 150 5 14 330 13 320 1.77e-95 287
MS.gene003287.t1 MTR_5g083860 47.826 322 154 4 11 330 16 325 1.87e-95 287
MS.gene003287.t1 MTR_4g029200 45.614 342 158 4 7 330 7 338 2.71e-95 287
MS.gene003287.t1 MTR_3g072190 47.352 321 156 3 14 330 7 318 5.80e-95 285
MS.gene003287.t1 MTR_4g029170 46.894 322 158 5 11 330 11 321 2.04e-94 284
MS.gene003287.t1 MTR_2g084080 47.386 306 152 2 25 330 21 317 5.93e-94 283
MS.gene003287.t1 MTR_7g072480 47.319 317 155 3 14 330 12 316 1.06e-93 282
MS.gene003287.t1 MTR_2g084000 47.869 305 151 2 26 330 23 319 1.08e-93 282
MS.gene003287.t1 MTR_4g125940 54.182 275 122 2 58 330 2 274 2.68e-93 280
MS.gene003287.t1 MTR_2g029880 66.512 215 60 3 139 353 7 209 4.72e-93 276
MS.gene003287.t1 MTR_2g084090 47.231 307 152 3 25 330 21 318 1.19e-92 280
MS.gene003287.t1 MTR_1g022970 47.020 302 160 0 29 330 46 347 1.98e-92 280
MS.gene003287.t1 MTR_2g084110 47.883 307 149 3 25 330 21 317 7.21e-92 278
MS.gene003287.t1 MTR_4g122640 45.201 323 172 3 9 330 18 336 1.28e-91 278
MS.gene003287.t1 MTR_4g074995 48.701 308 135 4 26 330 21 308 1.95e-91 276
MS.gene003287.t1 MTR_3g094670 49.383 324 151 4 9 330 10 322 2.51e-91 276
MS.gene003287.t1 MTR_2g084020 46.405 306 156 2 25 330 21 318 5.86e-91 275
MS.gene003287.t1 MTR_2g084010 47.059 306 154 2 25 330 21 318 8.95e-91 275
MS.gene003287.t1 MTR_4g029180 47.333 300 147 4 33 330 31 321 4.36e-90 273
MS.gene003287.t1 MTR_3g094630 48.649 333 157 5 1 330 1 322 1.17e-89 272
MS.gene003287.t1 MTR_4g029190 47.115 312 153 5 22 330 38 340 1.44e-89 273
MS.gene003287.t1 MTR_5g074970 45.317 331 165 5 4 330 8 326 4.15e-89 271
MS.gene003287.t1 MTR_4g074990 46.250 320 146 4 14 330 9 305 1.74e-87 266
MS.gene003287.t1 MTR_5g014100 45.875 303 160 2 32 330 29 331 4.22e-87 266
MS.gene003287.t1 MTR_5g074760 45.631 309 157 4 27 332 23 323 9.42e-87 265
MS.gene003287.t1 MTR_5g074740 45.603 307 156 4 27 330 23 321 2.08e-86 264
MS.gene003287.t1 MTR_5g074860 45.000 320 164 6 14 330 15 325 2.48e-85 261
MS.gene003287.t1 MTR_3g467600 46.278 309 156 4 25 330 23 324 6.31e-85 260
MS.gene003287.t1 MTR_5g074710 45.277 307 157 4 27 330 23 321 1.07e-83 257
MS.gene003287.t1 MTR_3g092990 40.483 331 191 3 1 330 1 326 1.09e-83 257
MS.gene003287.t1 MTR_7g107520 45.364 302 159 4 29 330 25 320 1.67e-83 256
MS.gene003287.t1 MTR_1g115900 43.344 323 171 6 11 331 10 322 1.82e-83 256
MS.gene003287.t1 MTR_2g088770 45.130 308 163 5 25 330 22 325 3.35e-83 256
MS.gene003287.t1 MTR_3g466180 42.722 316 171 3 16 330 17 323 4.71e-83 255
MS.gene003287.t1 MTR_4g114210 42.991 321 170 7 16 330 7 320 1.16e-82 254
MS.gene003287.t1 MTR_4g031140 40.123 324 182 4 29 352 28 339 1.25e-82 255
MS.gene003287.t1 MTR_1g101830 42.453 318 175 5 14 330 12 322 6.08e-82 252
MS.gene003287.t1 MTR_4g030890 42.157 306 172 3 25 330 96 396 1.10e-81 254
MS.gene003287.t1 MTR_4g046713 42.368 321 181 3 11 330 9 326 5.80e-81 250
MS.gene003287.t1 MTR_4g074980 45.426 317 140 7 14 330 11 294 1.41e-80 248
MS.gene003287.t1 MTR_5g049280 42.812 313 168 6 25 330 29 337 2.12e-80 249
MS.gene003287.t1 MTR_2g008710 42.857 329 176 6 6 330 5 325 4.03e-80 248
MS.gene003287.t1 MTR_5g016010 41.234 308 176 3 25 329 23 328 3.53e-78 243
MS.gene003287.t1 MTR_5g022870 40.823 316 177 7 16 330 10 316 4.58e-78 242
MS.gene003287.t1 MTR_3g072190 48.649 259 124 2 72 330 2 251 1.96e-77 238
MS.gene003287.t1 MTR_1g086320 40.385 312 176 4 25 330 26 333 5.66e-76 237
MS.gene003287.t1 MTR_1g009750 42.484 306 170 4 28 330 26 328 4.51e-75 235
MS.gene003287.t1 MTR_4g074980 48.800 250 118 4 14 260 11 253 1.78e-74 231
MS.gene003287.t1 MTR_4g133800 42.953 298 159 6 34 330 46 333 3.30e-74 233
MS.gene003287.t1 MTR_6g043280 41.056 341 168 8 11 330 4 332 1.03e-73 231
MS.gene003287.t1 MTR_7g086820 39.159 309 179 5 22 330 13 312 1.91e-73 230
MS.gene003287.t1 MTR_8g075100 40.924 303 169 7 29 330 26 319 1.91e-73 230
MS.gene003287.t1 MTR_4g127670 42.484 306 168 4 28 330 23 323 2.76e-73 230
MS.gene003287.t1 MTR_1g086490 39.748 317 178 4 25 330 26 340 3.02e-73 231
MS.gene003287.t1 MTR_4g095450 41.987 312 170 5 22 329 19 323 4.49e-73 229
MS.gene003287.t1 MTR_7g029030 41.694 307 165 4 28 330 24 320 2.41e-72 228
MS.gene003287.t1 MTR_1g025980 38.871 319 186 5 14 330 7 318 1.67e-71 225
MS.gene003287.t1 MTR_3g092990 38.369 331 187 4 1 330 1 315 4.78e-71 224
MS.gene003287.t1 MTR_4g132490 39.688 320 182 5 17 330 13 327 9.15e-71 224
MS.gene003287.t1 MTR_2g437770 41.196 301 165 6 32 331 53 342 1.97e-70 223
MS.gene003287.t1 MTR_6g043240 44.136 324 159 10 29 349 42 346 3.93e-70 223
MS.gene003287.t1 MTR_7g026990 39.103 312 179 5 21 331 22 323 1.15e-69 221
MS.gene003287.t1 MTR_0155s0040 38.033 305 176 5 26 330 24 315 1.48e-69 220
MS.gene003287.t1 MTR_1g090760 37.037 324 193 5 14 330 11 330 3.24e-69 220
MS.gene003287.t1 MTR_1g077000 38.411 302 173 5 29 330 39 327 6.05e-69 219
MS.gene003287.t1 MTR_2g008160 41.158 311 171 7 25 330 20 323 3.36e-68 217
MS.gene003287.t1 MTR_4g087965 39.016 305 179 5 28 327 41 343 9.00e-68 217
MS.gene003287.t1 MTR_6g027440 40.125 319 177 7 14 330 8 314 1.38e-67 215
MS.gene003287.t1 MTR_2g099175 36.190 315 183 6 24 330 31 335 2.61e-65 210
MS.gene003287.t1 MTR_5g074860 38.438 320 146 5 14 330 15 286 3.59e-65 208
MS.gene003287.t1 MTR_1g009750 39.216 306 163 5 28 330 26 311 7.19e-65 208
MS.gene003287.t1 MTR_1g038680 38.411 302 180 4 33 330 33 332 1.95e-64 207
MS.gene003287.t1 MTR_8g062780 36.538 312 190 4 23 330 17 324 2.04e-64 207
MS.gene003287.t1 MTR_6g043460 40.575 313 171 7 29 338 36 336 1.37e-63 206
MS.gene003287.t1 MTR_2g067440 34.957 349 186 6 18 329 42 386 2.61e-63 206
MS.gene003287.t1 MTR_7g086870 39.016 305 168 8 29 330 22 311 8.94e-63 202
MS.gene003287.t1 MTR_3g105790 40.196 306 175 4 27 330 23 322 1.18e-60 197
MS.gene003287.t1 MTR_2g008730 40.066 302 146 5 33 330 31 301 3.17e-60 196
MS.gene003287.t1 MTR_5g033470 35.238 315 191 7 24 330 68 377 1.18e-59 197
MS.gene003287.t1 MTR_2g077990 35.135 333 181 6 29 329 76 405 9.22e-59 195
MS.gene003287.t1 MTR_2g078610 34.535 333 183 6 29 329 76 405 4.59e-58 193
MS.gene003287.t1 MTR_0147s0010 33.951 324 178 5 26 329 74 381 3.64e-56 187
MS.gene003287.t1 MTR_2g078280 35.312 320 172 6 29 316 76 392 1.92e-54 184
MS.gene003287.t1 MTR_0286s0010 34.579 321 201 6 14 330 19 334 1.11e-53 180
MS.gene003287.t1 MTR_6g008075 34.579 321 201 6 14 330 19 334 1.11e-53 180
MS.gene003287.t1 MTR_2g067450 36.184 304 186 5 29 329 11 309 3.16e-53 178
MS.gene003287.t1 MTR_1g066710 33.548 310 195 4 26 332 24 325 8.90e-52 175
MS.gene003287.t1 MTR_2g008160 36.013 311 152 7 25 330 20 288 4.41e-51 172
MS.gene003287.t1 MTR_1g066680 33.013 312 193 6 26 332 24 324 5.67e-48 165
MS.gene003287.t1 MTR_1g066380 33.010 309 196 4 27 332 25 325 6.96e-48 164
MS.gene003287.t1 MTR_1g066640 33.548 310 195 4 26 332 24 325 1.79e-47 163
MS.gene003287.t1 MTR_4g132110 31.515 330 214 5 4 330 8 328 1.50e-46 161
MS.gene003287.t1 MTR_5g074700 40.086 232 114 5 102 330 5 214 3.99e-46 157
MS.gene003287.t1 MTR_4g132110 31.642 335 212 7 4 330 8 333 7.60e-46 159
MS.gene003287.t1 MTR_3g072210 46.597 191 93 4 141 330 56 238 1.45e-44 153
MS.gene003287.t1 MTR_7g072490 40.161 249 86 4 75 323 2 187 1.20e-43 150
MS.gene003287.t1 MTR_3g105790 40.329 243 140 3 90 330 7 246 6.30e-43 149
MS.gene003287.t1 MTR_1g066380 34.601 263 161 4 73 332 3 257 4.09e-40 142
MS.gene003287.t1 MTR_2g008160 43.529 170 92 3 25 194 20 185 4.41e-40 140
MS.gene003287.t1 MTR_3g072260 48.837 129 62 1 9 133 2 130 1.14e-34 124
MS.gene003287.t1 MTR_2g077980 30.216 278 150 9 91 329 11 283 1.58e-29 115
MS.gene003287.t1 MTR_2g029930 53.982 113 23 4 15 112 4 102 1.27e-28 107
MS.gene003287.t1 MTR_2g078560 29.596 223 124 4 138 329 99 319 3.07e-26 107
MS.gene003287.t1 MTR_5g058120 38.182 165 89 3 164 328 6 157 1.14e-22 95.9
MS.gene003287.t1 MTR_7g086790 32.821 195 109 4 76 270 17 189 1.86e-22 93.6
MS.gene003287.t1 MTR_1g098320 48.864 88 43 1 251 338 47 132 5.54e-21 88.2
MS.gene003287.t1 MTR_3g462850 37.241 145 80 6 193 330 9 149 1.21e-19 84.7
MS.gene003287.t1 MTR_1g089005 38.060 134 67 5 16 141 6 131 6.57e-17 77.4
MS.gene003287.t1 MTR_4g012865 46.479 71 38 0 26 96 74 144 5.88e-16 74.7
MS.gene003287.t1 MTR_3g107060 27.132 258 132 9 63 314 108 315 6.34e-16 77.8
MS.gene003287.t1 MTR_4g114220 49.367 79 30 2 55 133 29 97 7.87e-16 73.9
MS.gene003287.t1 MTR_4g031040 30.286 175 78 3 88 262 1 131 1.38e-15 73.2
MS.gene003287.t1 MTR_6g048160 52.941 68 28 2 68 135 22 85 3.10e-15 70.9
MS.gene003287.t1 MTR_5g074770 42.529 87 49 1 243 329 23 108 5.05e-15 70.9
MS.gene003287.t1 MTR_7g107500 44.444 99 51 3 232 330 3 97 7.30e-15 70.1
MS.gene003287.t1 MTR_7g086810 31.667 120 56 1 27 146 4 97 8.09e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003287.t1 AT5G06730 61.935 310 118 0 25 334 29 338 9.78e-133 383
MS.gene003287.t1 AT5G06720 60.261 307 122 0 25 331 28 334 5.87e-129 372
MS.gene003287.t1 AT3G32980 57.235 311 131 2 25 333 27 337 1.39e-122 357
MS.gene003287.t1 AT3G49110 57.051 312 132 2 24 333 28 339 2.02e-121 354
MS.gene003287.t1 AT2G38380 50.704 355 162 3 4 352 1 348 5.98e-121 353
MS.gene003287.t1 AT3G49120 56.731 312 133 2 24 333 27 338 3.55e-120 351
MS.gene003287.t1 AT4G08770 53.438 320 147 2 22 339 17 336 2.91e-117 343
MS.gene003287.t1 AT2G38390 49.859 355 165 3 4 352 1 348 4.31e-117 343
MS.gene003287.t1 AT4G08780 51.875 320 152 2 22 339 17 336 1.96e-114 336
MS.gene003287.t1 AT5G19880 50.909 330 158 3 4 330 1 329 3.46e-109 322
MS.gene003287.t1 AT2G18140 49.007 302 153 1 29 330 35 335 7.37e-100 298
MS.gene003287.t1 AT2G18150 49.338 302 152 1 29 330 36 336 7.87e-100 298
MS.gene003287.t1 AT5G66390 46.984 315 166 1 16 330 20 333 1.12e-98 296
MS.gene003287.t1 AT1G44970 49.359 312 156 1 19 330 37 346 1.21e-98 296
MS.gene003287.t1 AT5G19890 50.000 306 145 4 27 330 28 327 4.27e-97 291
MS.gene003287.t1 AT3G50990 48.366 306 157 1 25 330 37 341 2.46e-96 290
MS.gene003287.t1 AT4G36430 47.525 303 158 1 28 330 29 330 4.46e-96 289
MS.gene003287.t1 AT4G16270 47.855 303 153 4 29 330 50 348 2.82e-94 285
MS.gene003287.t1 AT5G05340 49.346 306 144 3 27 330 28 324 1.54e-93 282
MS.gene003287.t1 AT1G14550 45.794 321 166 3 11 330 8 321 1.27e-92 280
MS.gene003287.t1 AT1G14540 46.057 317 164 3 14 330 6 315 1.09e-90 275
MS.gene003287.t1 AT1G49570 45.847 301 158 3 29 326 48 346 2.45e-85 262
MS.gene003287.t1 AT1G68850 42.492 313 174 5 23 330 24 335 6.57e-85 260
MS.gene003287.t1 AT2G35380 47.020 302 156 3 33 330 34 335 1.96e-84 259
MS.gene003287.t1 AT2G22420 41.640 317 180 3 14 330 8 319 3.80e-84 258
MS.gene003287.t1 AT5G58400 45.062 324 165 5 10 330 12 325 2.11e-83 256
MS.gene003287.t1 AT1G71695 45.928 307 156 5 29 333 44 342 1.35e-82 255
MS.gene003287.t1 AT2G41480 41.246 337 179 7 4 330 1 328 1.61e-82 254
MS.gene003287.t1 AT5G58390 46.624 311 150 6 25 330 17 316 2.48e-82 253
MS.gene003287.t1 AT4G11290 42.947 319 178 3 14 330 10 326 1.97e-81 251
MS.gene003287.t1 AT5G51890 40.244 328 189 5 4 330 1 322 7.27e-81 249
MS.gene003287.t1 AT3G21770 43.087 311 171 5 18 326 18 324 8.83e-81 249
MS.gene003287.t1 AT4G37530 43.131 313 173 3 21 330 19 329 3.13e-79 246
MS.gene003287.t1 AT1G05260 41.640 317 179 4 16 330 13 325 1.61e-78 244
MS.gene003287.t1 AT3G01190 41.379 319 178 7 13 330 11 321 4.41e-78 243
MS.gene003287.t1 AT5G15180 38.415 328 197 4 4 330 6 329 8.95e-78 242
MS.gene003287.t1 AT4G30170 42.857 308 167 4 26 330 24 325 1.23e-77 241
MS.gene003287.t1 AT2G18980 42.997 307 166 4 27 330 23 323 1.57e-76 238
MS.gene003287.t1 AT5G17820 40.190 316 177 5 15 330 10 313 1.83e-76 238
MS.gene003287.t1 AT5G64120 44.051 311 158 7 23 330 31 328 2.17e-76 238
MS.gene003287.t1 AT3G03670 40.063 317 187 2 14 330 8 321 2.49e-76 238
MS.gene003287.t1 AT5G64110 46.205 303 148 8 33 330 38 330 1.50e-75 236
MS.gene003287.t1 AT5G17820 40.190 316 177 5 15 330 63 366 3.41e-75 236
MS.gene003287.t1 AT5G14130 41.824 318 174 5 17 330 20 330 9.18e-75 234
MS.gene003287.t1 AT5G39580 45.033 302 151 7 33 330 29 319 1.29e-74 233
MS.gene003287.t1 AT5G14130 41.693 319 175 5 16 330 60 371 2.28e-74 234
MS.gene003287.t1 AT4G25980 40.514 311 174 5 25 330 22 326 3.17e-74 233
MS.gene003287.t1 AT5G42180 39.432 317 183 6 14 329 8 316 4.34e-74 232
MS.gene003287.t1 AT1G05240 40.789 304 166 5 29 326 26 321 5.82e-74 232
MS.gene003287.t1 AT1G05250 40.789 304 166 5 29 326 26 321 5.82e-74 232
MS.gene003287.t1 AT4G37520 41.042 307 176 3 27 330 25 329 2.19e-72 228
MS.gene003287.t1 AT4G37520 41.042 307 173 4 27 330 25 326 7.88e-72 226
MS.gene003287.t1 AT3G49960 39.806 309 181 3 25 330 23 329 5.44e-71 224
MS.gene003287.t1 AT5G67400 40.129 309 180 3 25 330 23 329 8.11e-71 224
MS.gene003287.t1 AT2G39040 40.895 313 172 8 26 330 43 350 4.14e-68 218
MS.gene003287.t1 AT2G24800 40.260 308 173 5 27 330 29 329 2.81e-67 215
MS.gene003287.t1 AT4G31760 38.835 309 179 4 25 330 25 326 6.94e-67 214
MS.gene003287.t1 AT4G33420 38.245 319 182 6 14 330 20 325 8.36e-67 214
MS.gene003287.t1 AT1G77100 40.000 310 174 5 24 330 19 319 1.10e-66 213
MS.gene003287.t1 AT5G64100 40.532 301 166 7 33 330 41 331 1.63e-66 213
MS.gene003287.t1 AT4G33420 38.245 319 182 6 14 330 67 372 3.07e-66 214
MS.gene003287.t1 AT3G28200 38.312 308 180 5 25 330 17 316 1.73e-65 210
MS.gene003287.t1 AT4G37530 42.529 261 147 2 21 278 19 279 8.33e-65 207
MS.gene003287.t1 AT5G40150 37.662 308 183 4 25 330 28 328 2.03e-64 207
MS.gene003287.t1 AT4G33870 34.431 334 173 6 33 327 72 398 2.12e-64 210
MS.gene003287.t1 AT5G24070 38.487 304 168 7 37 332 45 337 9.71e-64 206
MS.gene003287.t1 AT2G35380 46.964 247 127 3 88 330 1 247 1.30e-63 203
MS.gene003287.t1 AT4G17690 37.377 305 180 5 29 330 26 322 2.13e-63 205
MS.gene003287.t1 AT1G30870 36.842 304 179 6 33 333 55 348 1.48e-62 203
MS.gene003287.t1 AT2G34060 37.179 312 187 6 23 328 36 344 3.54e-62 202
MS.gene003287.t1 AT4G26010 38.006 321 177 8 14 330 7 309 8.72e-62 200
MS.gene003287.t1 AT4G26010 37.695 321 178 7 14 330 35 337 1.27e-61 201
MS.gene003287.t1 AT1G24110 35.802 324 201 5 10 330 3 322 2.29e-61 199
MS.gene003287.t1 AT5G22410 36.774 310 182 8 28 332 27 327 3.13e-61 199
MS.gene003287.t1 AT2G43480 37.377 305 171 8 34 330 43 335 1.31e-60 198
MS.gene003287.t1 AT1G34510 37.578 322 185 7 10 330 3 309 6.52e-60 195
MS.gene003287.t1 AT5G47000 35.505 307 188 5 27 330 31 330 6.47e-59 194
MS.gene003287.t1 AT4G21960 33.993 303 189 4 33 332 35 329 1.66e-51 174
MS.gene003287.t1 AT3G17070 35.463 313 186 6 26 330 35 339 4.00e-51 173
MS.gene003287.t1 AT2G37130 33.010 309 195 5 26 330 27 327 3.85e-45 157
MS.gene003287.t1 AT2G37130 33.113 302 190 5 33 330 3 296 5.77e-44 154
MS.gene003287.t1 AT4G25980 43.605 172 93 3 25 196 67 234 6.30e-42 148
MS.gene003287.t1 AT5G39580 42.105 209 100 6 33 231 29 226 4.78e-39 139
MS.gene003287.t1 AT3G17070 34.328 268 159 7 71 330 18 276 1.24e-36 134
MS.gene003287.t1 AT2G24800 39.881 168 97 1 27 194 29 192 3.34e-34 126
MS.gene003287.t1 AT3G42570 41.096 73 43 0 97 169 49 121 1.01e-11 62.8

Find 63 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACAAGCCATTTCCAATT+TGG 0.173083 2.4:+59684138 None:intergenic
CCTCTTATAGAGTTGTTATT+TGG 0.210204 2.4:+59687175 None:intergenic
TCCATCTTCTGATGATTCTT+TGG 0.230163 2.4:+59683905 None:intergenic
AAAGAAGAGAGTTTGATTAT+TGG 0.249991 2.4:+59684052 None:intergenic
GCTGTGAATGGGAATTCTTC+TGG 0.287218 2.4:-59683945 MS.gene003287:CDS
CCTACTTGGCAAGTTCAATT+AGG 0.296251 2.4:-59684645 MS.gene003287:CDS
TACTACTCCAATCTCCAAAT+TGG 0.298047 2.4:-59684152 MS.gene003287:CDS
TGTATGGTGTTTGTGCTAAT+TGG 0.305051 2.4:-59687703 MS.gene003287:CDS
GCCATTTCCAATTTGGAGAT+TGG 0.328456 2.4:+59684145 None:intergenic
GATGAGACTACCAAGCATTC+TGG 0.329991 2.4:+59687570 None:intergenic
TTGGAGATTGGAGTAGTAGT+TGG 0.363452 2.4:+59684157 None:intergenic
TGCTTGCAATGTTTGTAAAT+AGG 0.391770 2.4:+59684250 None:intergenic
CCAAATAACAACTCTATAAG+AGG 0.396584 2.4:-59687175 MS.gene003287:CDS
TAACAACTCTATAAGAGGTT+TGG 0.399411 2.4:-59687170 MS.gene003287:CDS
TTTGTACCAGGTCCACCATT+AGG 0.400215 2.4:+59684221 None:intergenic
ATCTAGTTGTGCATTTGAAA+AGG 0.401167 2.4:+59687672 None:intergenic
CTTATAGAGTTGTTATTTGG+TGG 0.407307 2.4:+59687178 None:intergenic
TCCAATCTCCAAATTGGAAA+TGG 0.409054 2.4:-59684146 MS.gene003287:CDS
TGGTACAAACCTAACCGATT+TGG 0.423311 2.4:-59684207 MS.gene003287:CDS
GGCAAGTTCAATTAGGAAGA+AGG 0.436944 2.4:-59684638 MS.gene003287:CDS
ATGAGACTACCAAGCATTCT+GGG 0.442784 2.4:+59687571 None:intergenic
TCAAATGTGTCTGGTGTGGT+TGG 0.447339 2.4:+59684182 None:intergenic
AATAGTGTCAGAACCATTTG+TGG 0.449041 2.4:+59684094 None:intergenic
GAATGCTTGGTAGTCTCATC+AGG 0.457687 2.4:-59687567 MS.gene003287:CDS
TTGCAAGCACTATGTCCTAA+TGG 0.458887 2.4:-59684236 MS.gene003287:CDS
TGGTTGGGTCCAAATCGGTT+AGG 0.471942 2.4:+59684198 None:intergenic
TGCAGGCAAATGGTCCTACT+TGG 0.473885 2.4:-59684659 MS.gene003287:intron
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.4:+59687106 None:intergenic
TAGTCGAGTAAGGTTGAAAG+TGG 0.481738 2.4:+59684566 None:intergenic
TCTAGTTGTGCATTTGAAAA+GGG 0.482989 2.4:+59687673 None:intergenic
CCTAATTGAACTTGCCAAGT+AGG 0.485190 2.4:+59684645 None:intergenic
TGCTGAAATATCATCTGATC+TGG 0.487672 2.4:-59687068 MS.gene003287:intron
CAAATGTGTCTGGTGTGGTT+GGG 0.490133 2.4:+59684183 None:intergenic
CATGTACTGTTGTAAAATGA+AGG 0.493251 2.4:+59687649 None:intergenic
CAATCTGATCCCAGAATGCT+TGG 0.494211 2.4:-59687580 MS.gene003287:CDS
GAATGGGAATTCTTCTGGAT+TGG 0.497352 2.4:-59683940 MS.gene003287:CDS
ACCAAAGAATCATCAGAAGA+TGG 0.514184 2.4:-59683906 MS.gene003287:CDS
AAATAGGTCGTGTTAAGAGT+TGG 0.514846 2.4:+59684266 None:intergenic
TAGTTGGAGTCAAATGTGTC+TGG 0.523617 2.4:+59684173 None:intergenic
ACACAGTGTAATGCTGTGAA+TGG 0.525414 2.4:-59683957 MS.gene003287:CDS
GCAAGTTCAATTAGGAAGAA+GGG 0.528929 2.4:-59684637 MS.gene003287:CDS
ACTGATCTAGTTGCACTCTC+AGG 0.536287 2.4:-59684510 MS.gene003287:intron
ATGGTGTTTGTGCTAATTGG+AGG 0.541230 2.4:-59687700 MS.gene003287:CDS
GGTCGTGTTAAGAGTTGGAT+CGG 0.546024 2.4:+59684271 None:intergenic
GTCGTGTTAAGAGTTGGATC+GGG 0.554434 2.4:+59684272 None:intergenic
AGAATCATCAGAAGATGGAA+TGG 0.561224 2.4:-59683901 MS.gene003287:CDS
CACAGTGTAATGCTGTGAAT+GGG 0.565755 2.4:-59683956 MS.gene003287:CDS
CTATGTCCTAATGGTGGACC+TGG 0.568542 2.4:-59684227 MS.gene003287:CDS
AGTCGAGTAAGGTTGAAAGT+GGG 0.569417 2.4:+59684567 None:intergenic
TGGTGTGGTTGGGTCCAAAT+CGG 0.571740 2.4:+59684193 None:intergenic
CGTATCGTTCAGCAAAATTG+AGG 0.575174 2.4:+59687228 None:intergenic
GGTGGTCATACAATCGGAAG+AGG 0.591933 2.4:-59684347 MS.gene003287:CDS
GCTGTTGCACTTAGACCAAG+TGG 0.592170 2.4:+59687733 None:intergenic
AAATCGGTTAGGTTTGTACC+AGG 0.592503 2.4:+59684209 None:intergenic
GTCGAGTAAGGTTGAAAGTG+GGG 0.594816 2.4:+59684568 None:intergenic
TTATACAATTTCAGCAACAC+AGG 0.618081 2.4:-59684299 MS.gene003287:CDS
AAACCAGATCAAAACAGCGG+TGG 0.640248 2.4:-59687140 MS.gene003287:CDS
GGAGTCAAATGTGTCTGGTG+TGG 0.642490 2.4:+59684178 None:intergenic
TCGAGTAAGGTTGAAAGTGG+GGG 0.643752 2.4:+59684569 None:intergenic
CAAGCACTATGTCCTAATGG+TGG 0.655776 2.4:-59684233 MS.gene003287:CDS
AATCTTGATTCAATCGTACG+TGG 0.676766 2.4:-59687622 MS.gene003287:CDS
CAACTAGATCAGTAGTACTG+AGG 0.692185 2.4:+59684520 None:intergenic
GATAAACCAGATCAAAACAG+CGG 0.762418 2.4:-59687143 MS.gene003287:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATTTTTATTTT+TGG - chr2.4:59685276-59685295 MS.gene003287:intron 0.0%
!! AACACAAAAAAAAAAAAAAT+TGG + chr2.4:59685879-59685898 None:intergenic 10.0%
!! CAAGTATAATAAATTATAAA+GGG + chr2.4:59685666-59685685 None:intergenic 10.0%
!! TAAACATCTTAAATATTAAT+TGG - chr2.4:59686071-59686090 MS.gene003287:intron 10.0%
!! TCAAGTATAATAAATTATAA+AGG + chr2.4:59685667-59685686 None:intergenic 10.0%
!!! GATTTTAGTTAAAATAATAA+GGG + chr2.4:59685635-59685654 None:intergenic 10.0%
!!! GGTATTTAAATTTATTTTTA+CGG + chr2.4:59686597-59686616 None:intergenic 10.0%
!!! TAAACTTTTTTTTATTAGTT+GGG + chr2.4:59685832-59685851 None:intergenic 10.0%
!!! TTAAACTTTTTTTTATTAGT+TGG + chr2.4:59685833-59685852 None:intergenic 10.0%
!!! TTATTTTTAACTTTGTTTAT+AGG - chr2.4:59685937-59685956 MS.gene003287:intron 10.0%
!!! TTTTTTTTTATGACTAAATT+CGG - chr2.4:59686411-59686430 MS.gene003287:intron 10.0%
!! AAAAATAAAAAAATTACACG+TGG + chr2.4:59685271-59685290 None:intergenic 15.0%
!! AGATTGTTAAAAAATTTATC+CGG - chr2.4:59686338-59686357 MS.gene003287:intron 15.0%
!! AGTAAAAAAAAATTAAACGT+GGG + chr2.4:59687220-59687239 None:intergenic 15.0%
!! ATATGATCATGTAAAATTAA+AGG + chr2.4:59686292-59686311 None:intergenic 15.0%
!! GAAAAAGAAAAATAAATAGT+AGG + chr2.4:59684158-59684177 None:intergenic 15.0%
!! TAAAATAATAAGGGTAAAAA+TGG + chr2.4:59685626-59685645 None:intergenic 15.0%
!! TAAATTATAAAGGGTAAATA+TGG + chr2.4:59685657-59685676 None:intergenic 15.0%
!! TAGTAAAAAAAAATTAAACG+TGG + chr2.4:59687221-59687240 None:intergenic 15.0%
!! TATATTTATTTGTTTATCCT+TGG + chr2.4:59684793-59684812 None:intergenic 15.0%
!!! AAAAAAAGTTTAATTTTCCT+CGG - chr2.4:59685840-59685859 MS.gene003287:intron 15.0%
!!! GGATTTTAGTTAAAATAATA+AGG + chr2.4:59685636-59685655 None:intergenic 15.0%
!!! TCAAATTTAAATTTTAAGGA+CGG - chr2.4:59684176-59684195 MS.gene003287:CDS 15.0%
!!! TTGTAGTTTTTTTTTCTTAA+GGG + chr2.4:59685156-59685175 None:intergenic 15.0%
!!! TTTAAACTAGTCAAATTTTT+AGG + chr2.4:59686834-59686853 None:intergenic 15.0%
!!! TTTGTAGTTTTTTTTTCTTA+AGG + chr2.4:59685157-59685176 None:intergenic 15.0%
!! ATGATAAAAATGGGTAATAT+TGG - chr2.4:59687615-59687634 MS.gene003287:CDS 20.0%
!! GTAAAAAAAAATTAAACGTG+GGG + chr2.4:59687219-59687238 None:intergenic 20.0%
!! GTTCATTTAAATATATGACT+AGG + chr2.4:59684601-59684620 None:intergenic 20.0%
!! TAAAAAAAAATTAAACGTGG+GGG + chr2.4:59687218-59687237 None:intergenic 20.0%
!! TAGTTGTAAATTGACATAAA+AGG + chr2.4:59686147-59686166 None:intergenic 20.0%
!! TCATTTCTCAATTATATAAC+TGG - chr2.4:59684944-59684963 MS.gene003287:intron 20.0%
!!! AAAGTGTTTGATAAAATTAG+CGG + chr2.4:59686183-59686202 None:intergenic 20.0%
!!! ACAACTTTAAAAAAGTTTAG+GGG + chr2.4:59685124-59685143 None:intergenic 20.0%
!!! ACATGTTTCAATCATTTTTT+AGG - chr2.4:59687258-59687277 MS.gene003287:intron 20.0%
!!! CACAACTTTAAAAAAGTTTA+GGG + chr2.4:59685125-59685144 None:intergenic 20.0%
!!! CTTTTTTAAAGTTGTGATTT+TGG - chr2.4:59685129-59685148 MS.gene003287:intron 20.0%
!!! TCACAACTTTAAAAAAGTTT+AGG + chr2.4:59685126-59685145 None:intergenic 20.0%
!!! TGATATGATGGTTTTAATTT+TGG - chr2.4:59685081-59685100 MS.gene003287:intron 20.0%
!!! TGTAGTTTTTTTTTCTTAAG+GGG + chr2.4:59685155-59685174 None:intergenic 20.0%
!!! TTATTTTTATTTTTGGCCTT+GGG - chr2.4:59685283-59685302 MS.gene003287:intron 20.0%
!!! TTTATTTTTATTTTTGGCCT+TGG - chr2.4:59685282-59685301 MS.gene003287:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+AGG - chr2.4:59685344-59685363 MS.gene003287:intron 20.0%
!!! TTTTTAACAATCTCAAAAGT+GGG + chr2.4:59686331-59686350 None:intergenic 20.0%
!!! TTTTTTAACAATCTCAAAAG+TGG + chr2.4:59686332-59686351 None:intergenic 20.0%
! AAAGAAGAGAGTTTGATTAT+TGG + chr2.4:59687577-59687596 None:intergenic 25.0%
! AAATATATGACTAGGAAACT+AGG + chr2.4:59684593-59684612 None:intergenic 25.0%
! AAATCACATACATAGTAATG+AGG + chr2.4:59684286-59684305 None:intergenic 25.0%
! CATCATAAAACAACATGAAA+AGG + chr2.4:59686546-59686565 None:intergenic 25.0%
! GTTCAAACAAATCATTATCA+AGG - chr2.4:59686856-59686875 MS.gene003287:intron 25.0%
! TCATGTAAAATTAAAGGCTT+AGG + chr2.4:59686286-59686305 None:intergenic 25.0%
! TTCTCAATTATATAACTGGT+GGG - chr2.4:59684948-59684967 MS.gene003287:intron 25.0%
! TTTCTCAATTATATAACTGG+TGG - chr2.4:59684947-59684966 MS.gene003287:intron 25.0%
!! CATTCATGTTACATATTTTG+AGG + chr2.4:59687158-59687177 None:intergenic 25.0%
!!! ATTACCCATTTTTATCATTG+AGG + chr2.4:59687613-59687632 None:intergenic 25.0%
!!! GCTTTTATTTTCTATGAACA+AGG + chr2.4:59684661-59684680 None:intergenic 25.0%
!!! TATTTTTATTTTTGGCCTTG+GGG - chr2.4:59685284-59685303 MS.gene003287:intron 25.0%
!!! TGGTTATGTATATTTTGGTT+TGG - chr2.4:59685056-59685075 MS.gene003287:intron 25.0%
!!! TGTTTCAATCATTTTTTAGG+TGG - chr2.4:59687261-59687280 MS.gene003287:intron 25.0%
AAAAATAGCTTATAAGCTCG+TGG + chr2.4:59685546-59685565 None:intergenic 30.0%
AAACAGTCATGAAAATGTCA+AGG + chr2.4:59684135-59684154 None:intergenic 30.0%
AAGCAAACAAACGTAGATAT+TGG - chr2.4:59684677-59684696 MS.gene003287:intron 30.0%
AATTAATGTATGCCCCAATT+CGG - chr2.4:59684901-59684920 MS.gene003287:intron 30.0%
ATAAACTCACACATACAAAG+TGG + chr2.4:59686709-59686728 None:intergenic 30.0%
ATCTAGTTGTGCATTTGAAA+AGG + chr2.4:59683957-59683976 None:intergenic 30.0%
ATGCTACTAATTAACTGTTG+CGG + chr2.4:59686392-59686411 None:intergenic 30.0%
CATGTACTGTTGTAAAATGA+AGG + chr2.4:59683980-59683999 None:intergenic 30.0%
CATTTGTGGAAAAAAGTTCT+TGG + chr2.4:59687521-59687540 None:intergenic 30.0%
CCAAATAACAACTCTATAAG+AGG - chr2.4:59684451-59684470 MS.gene003287:intron 30.0%
CTATAAGCTATAAGCTCATT+TGG + chr2.4:59685437-59685456 None:intergenic 30.0%
GTAGCCTCAATGATAAAAAT+GGG - chr2.4:59687606-59687625 MS.gene003287:CDS 30.0%
TAACAACTCTATAAGAGGTT+TGG - chr2.4:59684456-59684475 MS.gene003287:intron 30.0%
TACAATGCAACAAAAATTGC+AGG - chr2.4:59686950-59686969 MS.gene003287:intron 30.0%
TCTAGTTGTGCATTTGAAAA+GGG + chr2.4:59683956-59683975 None:intergenic 30.0%
TGCTTGCAATGTTTGTAAAT+AGG + chr2.4:59687379-59687398 None:intergenic 30.0%
TGTAGCCTCAATGATAAAAA+TGG - chr2.4:59687605-59687624 MS.gene003287:CDS 30.0%
TGTCATTACATGAAACGAAA+TGG + chr2.4:59685790-59685809 None:intergenic 30.0%
TTATACAATTTCAGCAACAC+AGG - chr2.4:59687327-59687346 MS.gene003287:intron 30.0%
TTGACAAAATAAGCTCTGTT+TGG - chr2.4:59685477-59685496 MS.gene003287:intron 30.0%
TTGTATGTGTGAGTTTATGA+TGG - chr2.4:59686711-59686730 MS.gene003287:intron 30.0%
! CCTCTTATAGAGTTGTTATT+TGG + chr2.4:59684454-59684473 None:intergenic 30.0%
! GTAGACTTTTATATTGTGTC+TGG - chr2.4:59685036-59685055 MS.gene003287:intron 30.0%
! GTGTCTGGTTATGTATATTT+TGG - chr2.4:59685051-59685070 MS.gene003287:intron 30.0%
! TGCAATTTTTGTTGCATTGT+AGG + chr2.4:59686951-59686970 None:intergenic 30.0%
! TTCTATGAACAAGGAAGTTT+TGG + chr2.4:59684652-59684671 None:intergenic 30.0%
!! AGTTAGATTTTAGTCGAGTA+AGG + chr2.4:59687073-59687092 None:intergenic 30.0%
!! CTTATAGAGTTGTTATTTGG+TGG + chr2.4:59684451-59684470 None:intergenic 30.0%
!! GGTAATATTGGAGTTTTAAC+TGG - chr2.4:59687627-59687646 MS.gene003287:CDS 30.0%
!!! ATTTTTATTTTTGGCCTTGG+GGG - chr2.4:59685285-59685304 MS.gene003287:intron 30.0%
!!! CAAGAACTTTTTTCCACAAA+TGG - chr2.4:59687519-59687538 MS.gene003287:intron 30.0%
!!! GGGGTAAAGATGTAATTTTT+TGG - chr2.4:59686452-59686471 MS.gene003287:intron 30.0%
!!! TTTTTAGGTGGTCATACAAT+CGG - chr2.4:59687273-59687292 MS.gene003287:intron 30.0%
AAATAGGTCGTGTTAAGAGT+TGG + chr2.4:59687363-59687382 None:intergenic 35.0%
AAATGCCGAAATTGTTAGGT+TGG - chr2.4:59686651-59686670 MS.gene003287:intron 35.0%
AACGTCCAACCTAACAATTT+CGG + chr2.4:59686659-59686678 None:intergenic 35.0%
AAGCTATAAGCTCATTTGGT+GGG + chr2.4:59685433-59685452 None:intergenic 35.0%
AATAGTGTCAGAACCATTTG+TGG + chr2.4:59687535-59687554 None:intergenic 35.0%
AATCTTGATTCAATCGTACG+TGG - chr2.4:59684004-59684023 MS.gene003287:CDS 35.0%
ACCAAAGAATCATCAGAAGA+TGG - chr2.4:59687720-59687739 MS.gene003287:CDS 35.0%
AGAATCATCAGAAGATGGAA+TGG - chr2.4:59687725-59687744 MS.gene003287:CDS 35.0%
ATAAAAGTCTACACTACTGC+TGG + chr2.4:59685028-59685047 None:intergenic 35.0%
ATTAATGTATGCCCCAATTC+GGG - chr2.4:59684902-59684921 MS.gene003287:intron 35.0%
CAACAAAAATTGCAGGCAAA+TGG - chr2.4:59686957-59686976 MS.gene003287:intron 35.0%
GAAAATGTCAAGGTAAGAGA+TGG + chr2.4:59684125-59684144 None:intergenic 35.0%
GAAACAAGCCATTTCCAATT+TGG + chr2.4:59687491-59687510 None:intergenic 35.0%
GATAAACCAGATCAAAACAG+CGG - chr2.4:59684483-59684502 MS.gene003287:intron 35.0%
GCAAAAATGCCGAAATTGTT+AGG - chr2.4:59686647-59686666 MS.gene003287:intron 35.0%
GCAAGTTCAATTAGGAAGAA+GGG - chr2.4:59686989-59687008 MS.gene003287:intron 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr2.4:59686264-59686283 None:intergenic 35.0%
TAAGCTATAAGCTCATTTGG+TGG + chr2.4:59685434-59685453 None:intergenic 35.0%
TACTACTCCAATCTCCAAAT+TGG - chr2.4:59687474-59687493 MS.gene003287:intron 35.0%
TCAGAAGTTGTCCAAAACAT+AGG + chr2.4:59684765-59684784 None:intergenic 35.0%
TCCAATCTCCAAATTGGAAA+TGG - chr2.4:59687480-59687499 MS.gene003287:intron 35.0%
TCCATCTTCTGATGATTCTT+TGG + chr2.4:59687724-59687743 None:intergenic 35.0%
TGCTGAAATATCATCTGATC+TGG - chr2.4:59684558-59684577 MS.gene003287:CDS 35.0%
TGTATGGTGTTTGTGCTAAT+TGG - chr2.4:59683923-59683942 MS.gene003287:CDS 35.0%
TTCAAAGCGAATGATGAAGT+AGG - chr2.4:59686478-59686497 MS.gene003287:intron 35.0%
! AACAATTTCGGCATTTTTGC+CGG + chr2.4:59686647-59686666 None:intergenic 35.0%
! AGTTGTCACAACCTATGTTT+TGG - chr2.4:59684751-59684770 MS.gene003287:intron 35.0%
! CTCAATTTTGCTGAACGATA+CGG - chr2.4:59684399-59684418 MS.gene003287:intron 35.0%
! TCTTTGTATTTAAAGCCTCG+AGG + chr2.4:59684253-59684272 None:intergenic 35.0%
!! TTTGGTTTGGACTGATATGA+TGG - chr2.4:59685069-59685088 MS.gene003287:intron 35.0%
!!! TTTTTATTTTTGGCCTTGGG+GGG - chr2.4:59685286-59685305 MS.gene003287:intron 35.0%
AAATCGGTTAGGTTTGTACC+AGG + chr2.4:59687420-59687439 None:intergenic 40.0%
AACTCACACATACAAAGTGG+AGG + chr2.4:59686706-59686725 None:intergenic 40.0%
ACACAGTGTAATGCTGTGAA+TGG - chr2.4:59687669-59687688 MS.gene003287:CDS 40.0%
ACTGCTACAGTTGCAAACTT+AGG - chr2.4:59685314-59685333 MS.gene003287:intron 40.0%
ACTGCTATTAAGGCTCTGTT+TGG - chr2.4:59685403-59685422 MS.gene003287:intron 40.0%
AGCGTAGACCAAGTCAAAAT+TGG + chr2.4:59685225-59685244 None:intergenic 40.0%
AGTCGAGTAAGGTTGAAAGT+GGG + chr2.4:59687062-59687081 None:intergenic 40.0%
ATAGTTGTGAACTTTGTCGC+AGG - chr2.4:59684366-59684385 MS.gene003287:intron 40.0%
ATGAGACTACCAAGCATTCT+GGG + chr2.4:59684058-59684077 None:intergenic 40.0%
ATGGTGTTTGTGCTAATTGG+AGG - chr2.4:59683926-59683945 MS.gene003287:CDS 40.0%
CAACTAGATCAGTAGTACTG+AGG + chr2.4:59687109-59687128 None:intergenic 40.0%
CACAGTGTAATGCTGTGAAT+GGG - chr2.4:59687670-59687689 MS.gene003287:CDS 40.0%
CCTAATTGAACTTGCCAAGT+AGG + chr2.4:59686984-59687003 None:intergenic 40.0%
CCTACTTGGCAAGTTCAATT+AGG - chr2.4:59686981-59687000 MS.gene003287:intron 40.0%
CGTATCGTTCAGCAAAATTG+AGG + chr2.4:59684401-59684420 None:intergenic 40.0%
CTATAAGCTCAAACGCTACT+TGG + chr2.4:59685580-59685599 None:intergenic 40.0%
CTCATAAGTCCTAACTCAAC+CGG - chr2.4:59686625-59686644 MS.gene003287:intron 40.0%
CTGCTACAGTTGCAAACTTA+GGG - chr2.4:59685315-59685334 MS.gene003287:intron 40.0%
GAATGGGAATTCTTCTGGAT+TGG - chr2.4:59687686-59687705 MS.gene003287:CDS 40.0%
GACAACTTCTGATACAACCA+AGG - chr2.4:59684773-59684792 MS.gene003287:intron 40.0%
GCCATTTCCAATTTGGAGAT+TGG + chr2.4:59687484-59687503 None:intergenic 40.0%
GGCAAGTTCAATTAGGAAGA+AGG - chr2.4:59686988-59687007 MS.gene003287:intron 40.0%
TAGGACTTATGAGACACGAT+TGG + chr2.4:59686618-59686637 None:intergenic 40.0%
TAGTCGAGTAAGGTTGAAAG+TGG + chr2.4:59687063-59687082 None:intergenic 40.0%
TAGTTGGAGTCAAATGTGTC+TGG + chr2.4:59687456-59687475 None:intergenic 40.0%
TAGTTGTGAACTTTGTCGCA+GGG - chr2.4:59684367-59684386 MS.gene003287:intron 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.4:59684523-59684542 None:intergenic 40.0%
TGCTACAGTTGCAAACTTAG+GGG - chr2.4:59685316-59685335 MS.gene003287:intron 40.0%
TGGTACAAACCTAACCGATT+TGG - chr2.4:59687419-59687438 MS.gene003287:intron 40.0%
TTAAAGGCTTAGGCTCTGTT+TGG + chr2.4:59686276-59686295 None:intergenic 40.0%
TTGCAAGCACTATGTCCTAA+TGG - chr2.4:59687390-59687409 MS.gene003287:intron 40.0%
TTGGAGATTGGAGTAGTAGT+TGG + chr2.4:59687472-59687491 None:intergenic 40.0%
TTTCGACAGTTAACTACAGC+CGG + chr2.4:59686360-59686379 None:intergenic 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + chr2.4:59685370-59685389 None:intergenic 40.0%
! GTTTGCAACTGTAGCAGTTT+TGG + chr2.4:59685312-59685331 None:intergenic 40.0%
! TTGGTAGTCAGTATATACCG+AGG + chr2.4:59685860-59685879 None:intergenic 40.0%
!! ACCAAGTCAAAATTGGCCTT+GGG + chr2.4:59685218-59685237 None:intergenic 40.0%
!! GTTAGGTTGGACGTTATGAT+CGG - chr2.4:59686664-59686683 MS.gene003287:intron 40.0%
!! TGCAACAGCTTTTTGCTGTA+TGG - chr2.4:59683907-59683926 MS.gene003287:CDS 40.0%
!! TTAGGTTGGACGTTATGATC+GGG - chr2.4:59686665-59686684 MS.gene003287:intron 40.0%
!!! GGAGTTTTAACTGGATCTCA+AGG - chr2.4:59687636-59687655 MS.gene003287:CDS 40.0%
!!! TTTTTGGTTGACAGACGAGA+TGG + chr2.4:59686742-59686761 None:intergenic 40.0%
AAACCAGATCAAAACAGCGG+TGG - chr2.4:59684486-59684505 MS.gene003287:intron 45.0%
AAGCTTGTATGCCCCAATTC+GGG - chr2.4:59684978-59684997 MS.gene003287:intron 45.0%
ACTGATCTAGTTGCACTCTC+AGG - chr2.4:59687116-59687135 MS.gene003287:CDS 45.0%
ATAGCCTTCCTTACCCGAAT+TGG + chr2.4:59684918-59684937 None:intergenic 45.0%
ATCGCAACTTCGTGAAAGTC+AGG - chr2.4:59685372-59685391 MS.gene003287:intron 45.0%
CAAATGTGTCTGGTGTGGTT+GGG + chr2.4:59687446-59687465 None:intergenic 45.0%
CAAGCACTATGTCCTAATGG+TGG - chr2.4:59687393-59687412 MS.gene003287:intron 45.0%
CAAGCTTGTATGCCCCAATT+CGG - chr2.4:59684977-59684996 MS.gene003287:intron 45.0%
CAAGGAAGGCTATCAAAGTG+TGG - chr2.4:59685001-59685020 MS.gene003287:intron 45.0%
CAATCTGATCCCAGAATGCT+TGG - chr2.4:59684046-59684065 MS.gene003287:CDS 45.0%
GATGAGACTACCAAGCATTC+TGG + chr2.4:59684059-59684078 None:intergenic 45.0%
GCGACAGTTAATTGTCGATG+GGG - chr2.4:59686433-59686452 MS.gene003287:intron 45.0%
GCTACAGTTGCAAACTTAGG+GGG - chr2.4:59685317-59685336 MS.gene003287:intron 45.0%
GCTGTGAATGGGAATTCTTC+TGG - chr2.4:59687681-59687700 MS.gene003287:CDS 45.0%
GGCGACAGTTAATTGTCGAT+GGG - chr2.4:59686432-59686451 MS.gene003287:intron 45.0%
GGTCGTGTTAAGAGTTGGAT+CGG + chr2.4:59687358-59687377 None:intergenic 45.0%
GTCGAGTAAGGTTGAAAGTG+GGG + chr2.4:59687061-59687080 None:intergenic 45.0%
GTCGTGTTAAGAGTTGGATC+GGG + chr2.4:59687357-59687376 None:intergenic 45.0%
TAGCCTTCCTTACCCGAATT+GGG + chr2.4:59684917-59684936 None:intergenic 45.0%
TCAAATGTGTCTGGTGTGGT+TGG + chr2.4:59687447-59687466 None:intergenic 45.0%
TCGAGTAAGGTTGAAAGTGG+GGG + chr2.4:59687060-59687079 None:intergenic 45.0%
TCGCAACTTCGTGAAAGTCA+GGG - chr2.4:59685373-59685392 MS.gene003287:intron 45.0%
TGCCACAGGTGCAAAACTTA+GGG + chr2.4:59685186-59685205 None:intergenic 45.0%
TTTAAGCGAGTTAGACCTCG+AGG - chr2.4:59684235-59684254 MS.gene003287:CDS 45.0%
TTTGTACCAGGTCCACCATT+AGG + chr2.4:59687408-59687427 None:intergenic 45.0%
! CACATACAAAGTGGAGGCAT+CGG + chr2.4:59686700-59686719 None:intergenic 45.0%
! GAATGCTTGGTAGTCTCATC+AGG - chr2.4:59684059-59684078 MS.gene003287:CDS 45.0%
! GACCAAGTCAAAATTGGCCT+TGG + chr2.4:59685219-59685238 None:intergenic 45.0%
! TAGGTTGGACGTTATGATCG+GGG - chr2.4:59686666-59686685 MS.gene003287:intron 45.0%
! TTTTGCACCTGTGGCAGTTT+TGG - chr2.4:59685190-59685209 MS.gene003287:intron 45.0%
!! CAAGTCAAAATTGGCCTTGG+GGG + chr2.4:59685216-59685235 None:intergenic 45.0%
!! CCAAGTCAAAATTGGCCTTG+GGG + chr2.4:59685217-59685236 None:intergenic 45.0%
!! GCATTTTTGCCGGTTGAGTT+AGG + chr2.4:59686637-59686656 None:intergenic 45.0%
!!! AGGAAGGTTTTGAGCTGCAA+GGG + chr2.4:59687036-59687055 None:intergenic 45.0%
!!! TTTCCACCGCTGTTTTGATC+TGG + chr2.4:59684492-59684511 None:intergenic 45.0%
!! GATAAATAAAATATATATTA+TGG + chr2.4:59686929-59686948 None:intergenic 5.0%
!!! AGTATTTTTTATTTATTTTT+TGG + chr2.4:59686758-59686777 None:intergenic 5.0%
!!! TTTTTCAAATTTAAATTTTA+AGG - chr2.4:59684172-59684191 MS.gene003287:CDS 5.0%
AGCCTTCCTTACCCGAATTG+GGG + chr2.4:59684916-59684935 None:intergenic 50.0%
ATAGCCTTCCTTGCCCGAAT+TGG + chr2.4:59684994-59685013 None:intergenic 50.0%
CCACAGGTGCAAAACTTAGG+GGG + chr2.4:59685184-59685203 None:intergenic 50.0%
CGCAACTTCGTGAAAGTCAG+GGG - chr2.4:59685374-59685393 MS.gene003287:intron 50.0%
CGGCGACAGTTAATTGTCGA+TGG - chr2.4:59686431-59686450 MS.gene003287:intron 50.0%
CTGCCACAGGTGCAAAACTT+AGG + chr2.4:59685187-59685206 None:intergenic 50.0%
GCAACTTCGTGAAAGTCAGG+GGG - chr2.4:59685375-59685394 MS.gene003287:intron 50.0%
GCCACAGGTGCAAAACTTAG+GGG + chr2.4:59685185-59685204 None:intergenic 50.0%
GCTGTTGCACTTAGACCAAG+TGG + chr2.4:59683896-59683915 None:intergenic 50.0%
GGAGTCAAATGTGTCTGGTG+TGG + chr2.4:59687451-59687470 None:intergenic 50.0%
GGGGGCGAAAACTGCTATTA+AGG - chr2.4:59685393-59685412 MS.gene003287:intron 50.0%
GGTGGTCATACAATCGGAAG+AGG - chr2.4:59687279-59687298 MS.gene003287:intron 50.0%
TACACGTGGCACCTCACTTA+GGG + chr2.4:59685257-59685276 None:intergenic 50.0%
TAGCCTTCCTTGCCCGAATT+GGG + chr2.4:59684993-59685012 None:intergenic 50.0%
TGCAGGCAAATGGTCCTACT+TGG - chr2.4:59686967-59686986 MS.gene003287:intron 50.0%
TGGTGTGGTTGGGTCCAAAT+CGG + chr2.4:59687436-59687455 None:intergenic 50.0%
TGGTTGGGTCCAAATCGGTT+AGG + chr2.4:59687431-59687450 None:intergenic 50.0%
TGTATGCCCCAATTCGGGTA+AGG - chr2.4:59684907-59684926 MS.gene003287:intron 50.0%
TTACACGTGGCACCTCACTT+AGG + chr2.4:59685258-59685277 None:intergenic 50.0%
!! CTATGTCCTAATGGTGGACC+TGG - chr2.4:59687399-59687418 MS.gene003287:intron 50.0%
!!! CAGGAAGGTTTTGAGCTGCA+AGG + chr2.4:59687037-59687056 None:intergenic 50.0%
!!! CCCCAAGGCCAATTTTGACT+TGG - chr2.4:59685214-59685233 MS.gene003287:intron 50.0%
AGCCTTCCTTGCCCGAATTG+GGG + chr2.4:59684992-59685011 None:intergenic 55.0%
GTAAGGTTGAAAGTGGGGGC+AGG + chr2.4:59687056-59687075 None:intergenic 55.0%
TGCCCCAATTCGGGTAAGGA+AGG - chr2.4:59684911-59684930 MS.gene003287:intron 55.0%
TGTATGCCCCAATTCGGGCA+AGG - chr2.4:59684983-59685002 MS.gene003287:intron 55.0%
! CCCCCTAAGTTTTGCACCTG+TGG - chr2.4:59685181-59685200 MS.gene003287:intron 55.0%
!! TGACTTGGTCTACGCTGACG+TGG - chr2.4:59685229-59685248 MS.gene003287:intron 55.0%
CTGACGTGGCACCCTAAGTG+AGG - chr2.4:59685243-59685262 MS.gene003287:intron 60.0%
GGTTGAAAGTGGGGGCAGGA+AGG + chr2.4:59687052-59687071 None:intergenic 60.0%
TGCCCCAATTCGGGCAAGGA+AGG - chr2.4:59684987-59685006 MS.gene003287:intron 60.0%
TTGGGGGCCAAAACTGCCAC+AGG + chr2.4:59685200-59685219 None:intergenic 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + chr2.4:59685302-59685321 None:intergenic 60.0%
!! TGTGGCAGTTTTGGCCCCCA+AGG - chr2.4:59685199-59685218 MS.gene003287:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 59683887 59687761 59683887 ID=MS.gene003287
chr2.4 mRNA 59683887 59687761 59683887 ID=MS.gene003287.t1;Parent=MS.gene003287
chr2.4 exon 59687540 59687761 59687540 ID=MS.gene003287.t1.exon1;Parent=MS.gene003287.t1
chr2.4 CDS 59687540 59687761 59687540 ID=cds.MS.gene003287.t1;Parent=MS.gene003287.t1
chr2.4 exon 59687069 59687260 59687069 ID=MS.gene003287.t1.exon2;Parent=MS.gene003287.t1
chr2.4 CDS 59687069 59687260 59687069 ID=cds.MS.gene003287.t1;Parent=MS.gene003287.t1
chr2.4 exon 59684511 59684676 59684511 ID=MS.gene003287.t1.exon3;Parent=MS.gene003287.t1
chr2.4 CDS 59684511 59684676 59684511 ID=cds.MS.gene003287.t1;Parent=MS.gene003287.t1
chr2.4 exon 59683887 59684368 59683887 ID=MS.gene003287.t1.exon4;Parent=MS.gene003287.t1
chr2.4 CDS 59683887 59684368 59683887 ID=cds.MS.gene003287.t1;Parent=MS.gene003287.t1
Gene Sequence

>MS.gene003287

ATGAATCCACTTGGTCTAAGTGCAACAGCTTTTTGCTGTATGGTGTTTGTGCTAATTGGAGGAGTACCCTTTTCAAATGCACAACTAGATCCTTCATTTTACAACAGTACATGTTCTAATCTTGATTCAATCGTACGTGGTGTGCTCACAAATGTTTCACAATCTGATCCCAGAATGCTTGGTAGTCTCATCAGGCTACATTTTCATGACTGTTTTGTTCAAGTATGTGTGTTCTCCATCTCTTACCTTGACATTTTCATGACTGTTTCCTACTATTTATTTTTCTTTTTCAAATTTAAATTTTAAGGACGGTGAATTTTGTGAAATTATAAGTGTCTCGTAGTAATATTTAAGCGAGTTAGACCTCGAGGCTTTAAATACAAAGATTCAATTAAACCTCATTACTATGTATGTGATTTCGTCAAATTTGTTGTTATTTCAAACATGCGCGCATAATGAGTTCAAATGTATATATGCTAATAGTTGTGAACTTTGTCGCAGGGTTGCGATGCCTCAATTTTGCTGAACGATACGGCTACAATAGTGAGCGAGCAAAGTGCACCACCAAATAACAACTCTATAAGAGGTTTGGATGTGATAAACCAGATCAAAACAGCGGTGGAAAATGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCTCTTTCTGCTGAAATATCATCTGATCTGGTATATATTTCCTAGTTTCCTAGTCATATATTTAAATGAACTTCTAGCTAGATAGTATGTTGTTTAATTCCAAAACTTCCTTGTTCATAGAAAATAAAAGCAAACAAACGTAGATATTGGTACGAAAATCATAGAAAAGAAAGTAAGAACAGAATGAGAGTATGAAAATAGAGTTGTCACAACCTATGTTTTGGACAACTTCTGATACAACCAAGGATAAACAAATAAATATATGTATTGACACAAAAATCGAAACAATAGAGAGAGAGTAAGAACACAATAAAATATATGAAAGAGAAAGTTGTCTAAAAAATTGTTACAAATTAATGTATGCCCCAATTCGGGTAAGGAAGGCTATCAAATGTCATTTCTCAATTATATAACTGGTGGGATTTCACAAGCTTGTATGCCCCAATTCGGGCAAGGAAGGCTATCAAAGTGTGGTCCAGCAGTAGTGTAGACTTTTATATTGTGTCTGGTTATGTATATTTTGGTTTGGACTGATATGATGGTTTTAATTTTGGTTTAATAGCAGTTTTAGCCCCTAAACTTTTTTAAAGTTGTGATTTTGGCCCCTTAAGAAAAAAAAACTACAAAACTGCCCCCTAAGTTTTGCACCTGTGGCAGTTTTGGCCCCCAAGGCCAATTTTGACTTGGTCTACGCTGACGTGGCACCCTAAGTGAGGTGCCACGTGTAATTTTTTTATTTTTATTTTTGGCCTTGGGGGGCCAAAACTGCTACAGTTGCAAACTTAGGGGGCAGTTTTGTAGTTTTTTTTCTTAGAGGCCAAAATCGCAACTTCGTGAAAGTCAGGGGGCGAAAACTGCTATTAAGGCTCTGTTTGGTAAGCCCACCAAATGAGCTTATAGCTTATAGCTTATAGCTTATAAGCTCGTTTGACAAAATAAGCTCTGTTTGGTAACATTTTTTTACAACGAGCTTATAGCTTATTTCACGAATTTCCACGAGCTTATAAGCTATTTTTCAGAAGCTATTCCAAGTAGCGTTTGAGCTTATAGCTTATAGCTTATTATCATTTATTCCATTTTTACCCTTATTATTTTAACTAAAATCCATATTTACCCTTTATAATTTATTATACTTGAAAACTAATAATATAACGTTATTGTGCGACGTATTTTTTATACTACAAAGTATGCATGCTTTTATTTAGCACTCTTTCAATGTATTACAATGCAAATGACACCATTTCGTTTCATGTAATGACACATGCAATTTTTTATATTTCCCAACTAATAAAAAAAAGTTTAATTTTCCTCGGTATATACTGACTACCAATTTTTTTTTTTTTTGTGTTATTCTTTTAACACTTTTTTCTTCTAATCTTATCGATGATTATTTTTAACTTTGTTTATAGGATAAAATTTTATACTTTAATCATTCATAAAGTATAAAAATTGAATGAAATAAACTTAAAATAATTTCTTAATGAAAAATATATGTTGATTATATTAATAAATTTAAATGACTAAACATCTTAAATATTAATTGGTATAGATTGTATTATAAACTCTTAAAAACATTATTATGAATAAAACATGTCCTTTTATGTCAATTTACAACTATCAGCTAGTTGAACCGCTAATTTTATCAAACACTTTAATTAGCTTATCAGCTATAAGCTATCAGCTAAAAGCTATCAGCTAGCTTATAAGCTATCCGCTATTTTTACCAAACAGAGCCTAAGCCTTTAATTTTACATGATCATATCATGAACATTGATGTTCCCACTTTTGAGATTGTTAAAAAATTTATCCGGCTGTAGTTAACTGTCGAAATTCATTGTTCCGCAACAGTTAATTAGTAGCATTTTTTTTTATGACTAAATTCGGCGACAGTTAATTGTCGATGGGGTAAAGATGTAATTTTTTGGTGTTTCAAAGCGAATGATGAAGTAGGAACAGCAAAATTATCATATCTTATGCTCTAAAGTTGTACTTTCCTTTTCATGTTGTTTTATGATGTTTTAATACATTGTTAAAGAAATACTAACCGTAAAAATAAATTTAAATACCAATCGTGTCTCATAAGTCCTAACTCAACCGGCAAAAATGCCGAAATTGTTAGGTTGGACGTTATGATCGGGGTTCGAACTCCGATGCCTCCACTTTGTATGTGTGAGTTTATGATGGCTTTGCCATCTCGTCTGTCAACCAAAAAATAAATAAAAAATACTAACAGTAAAAATAAATAGTTAAAATAGTTTAATAAAAATGAATTAGTTATTTGCCTAAAAATTTGACTAGTTTAAATAGTTCAAACAAATCATTATCAAGGATATGTGACAATGTACGTTTTTCAATTTTATTAATTAACATCATAAACCATAATATATATTTTATTTATCCTACAATGCAACAAAAATTGCAGGCAAATGGTCCTACTTGGCAAGTTCAATTAGGAAGAAGGGATAGTTTGACAGCAAATAATTCCCTTGCAGCTCAAAACCTTCCTGCCCCCACTTTCAACCTTACTCGACTAAAATCTAACTTTGATAATCAAAACCTCAGTACTACTGATCTAGTTGCACTCTCAGGTATAAATTTTTTGTTTCCTCAAAATATGTAACATGAATGTATGTACATATAGTGTAAAAATGACTCATATTAAGAACCCCCACGTTTAATTTTTTTTTACTAATGATATGATTGCATTAACATGTTTCAATCATTTTTTAGGTGGTCATACAATCGGAAGAGGTCAATGCAGATTTTTCGTTGATCGATTATACAATTTCAGCAACACAGGCAATCCCGATCCAACTCTTAACACGACCTATTTACAAACATTGCAAGCACTATGTCCTAATGGTGGACCTGGTACAAACCTAACCGATTTGGACCCAACCACACCAGACACATTTGACTCCAACTACTACTCCAATCTCCAAATTGGAAATGGCTTGTTTCAGAGTGACCAAGAACTTTTTTCCACAAATGGTTCTGACACTATTTCTATTGTCAATAGTTTCGCCAATAATCAAACTCTCTTCTTTGAAAATTTTGTAGCCTCAATGATAAAAATGGGTAATATTGGAGTTTTAACTGGATCTCAAGGTGAAATTAGAACACAGTGTAATGCTGTGAATGGGAATTCTTCTGGATTGGCTACTGTAGTCACCAAAGAATCATCAGAAGATGGAATGGCTAGCTCATTCTAA
Protein sequence

>MS.gene003287.t1

MNPLGLSATAFCCMVFVLIGGVPFSNAQLDPSFYNSTCSNLDSIVRGVLTNVSQSDPRMLGSLIRLHFHDCFVQGCDASILLNDTATIVSEQSAPPNNNSIRGLDVINQIKTAVENACPNTVSCADILALSAEISSDLANGPTWQVQLGRRDSLTANNSLAAQNLPAPTFNLTRLKSNFDNQNLSTTDLVALSGGHTIGRGQCRFFVDRLYNFSNTGNPDPTLNTTYLQTLQALCPNGGPGTNLTDLDPTTPDTFDSNYYSNLQIGNGLFQSDQELFSTNGSDTISIVNSFANNQTLFFENFVASMIKMGNIGVLTGSQGEIRTQCNAVNGNSSGLATVVTKESSEDGMASSF