AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02087

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02087.t1 MTR_2g029910 83.569 353 57 1 1 352 1 353 0.0 595
MS.gene02087.t1 MTR_2g029850 79.143 350 72 1 4 352 3 352 0.0 557
MS.gene02087.t1 MTR_2g029860 73.352 349 89 3 7 352 6 353 1.61e-180 504
MS.gene02087.t1 MTR_2g029820 68.258 356 108 2 1 352 1 355 5.34e-180 503
MS.gene02087.t1 MTR_2g029800 69.231 351 106 1 4 352 3 353 8.57e-179 499
MS.gene02087.t1 MTR_2g029815 66.006 353 118 2 1 352 1 352 4.31e-170 478
MS.gene02087.t1 MTR_2g029740 64.773 352 120 1 4 351 3 354 2.75e-164 463
MS.gene02087.t1 MTR_2g028980 63.636 352 124 1 4 351 3 354 7.17e-163 459
MS.gene02087.t1 MTR_2g029830 68.168 333 101 2 23 350 21 353 7.33e-163 459
MS.gene02087.t1 MTR_2g029750 64.023 353 122 2 4 352 3 354 1.22e-160 454
MS.gene02087.t1 MTR_2g029560 59.599 349 134 2 4 352 3 344 1.72e-146 417
MS.gene02087.t1 MTR_2g029730 58.571 350 137 3 4 352 3 345 2.24e-139 399
MS.gene02087.t1 MTR_2g029830 67.260 281 87 2 75 350 5 285 3.17e-132 379
MS.gene02087.t1 MTR_7g093370 59.935 307 122 1 26 331 65 371 5.10e-127 369
MS.gene02087.t1 MTR_1g054205 59.223 309 125 1 24 331 18 326 3.42e-125 363
MS.gene02087.t1 MTR_2g029880 78.873 213 35 2 140 352 7 209 6.35e-117 337
MS.gene02087.t1 MTR_8g076820 50.495 303 149 1 30 332 30 331 7.71e-105 311
MS.gene02087.t1 MTR_4g125940 49.107 336 161 4 1 332 1 330 3.93e-102 304
MS.gene02087.t1 MTR_5g021060 49.669 302 151 1 30 331 30 330 2.12e-101 302
MS.gene02087.t1 MTR_2g040000 48.534 307 153 2 29 332 28 332 3.03e-97 291
MS.gene02087.t1 MTR_1g022970 48.344 302 156 0 30 331 46 347 2.72e-96 290
MS.gene02087.t1 MTR_4g029200 46.602 309 156 2 23 331 39 338 1.15e-95 288
MS.gene02087.t1 MTR_2g084080 44.444 324 171 2 8 331 3 317 3.55e-95 286
MS.gene02087.t1 MTR_2g084090 46.753 308 154 3 25 331 20 318 1.05e-94 285
MS.gene02087.t1 MTR_2g084110 46.580 307 155 2 25 331 20 317 1.51e-94 284
MS.gene02087.t1 MTR_7g072510 45.312 320 158 3 12 331 10 312 1.90e-94 284
MS.gene02087.t1 MTR_3g094650 46.605 324 158 4 6 327 8 318 4.55e-94 283
MS.gene02087.t1 MTR_4g083710 48.052 308 150 3 27 331 24 324 1.11e-93 282
MS.gene02087.t1 MTR_5g017850 48.366 306 152 4 28 331 25 326 2.32e-93 281
MS.gene02087.t1 MTR_3g072190 47.059 306 153 2 26 331 22 318 3.19e-93 281
MS.gene02087.t1 MTR_3g466200 45.679 324 160 5 11 331 10 320 8.20e-93 280
MS.gene02087.t1 MTR_5g017860 46.885 305 158 3 28 331 25 326 1.47e-92 280
MS.gene02087.t1 MTR_2g084010 44.136 324 173 2 8 331 3 318 4.05e-92 278
MS.gene02087.t1 MTR_4g029180 49.502 301 141 4 33 331 30 321 4.13e-92 278
MS.gene02087.t1 MTR_4g125940 53.261 276 125 2 59 332 2 275 5.27e-92 276
MS.gene02087.t1 MTR_4g029170 45.912 318 161 4 16 331 13 321 1.71e-91 276
MS.gene02087.t1 MTR_2g084020 43.827 324 174 2 8 331 3 318 1.96e-91 276
MS.gene02087.t1 MTR_7g072480 47.697 304 150 2 28 331 22 316 1.09e-90 275
MS.gene02087.t1 MTR_4g029190 45.455 308 156 4 27 331 42 340 4.04e-90 274
MS.gene02087.t1 MTR_3g467600 46.602 309 155 3 26 331 23 324 2.96e-89 271
MS.gene02087.t1 MTR_2g084000 45.246 305 159 2 27 331 23 319 3.50e-89 271
MS.gene02087.t1 MTR_5g074860 45.031 322 166 4 12 330 11 324 1.23e-88 270
MS.gene02087.t1 MTR_5g014100 45.545 303 161 2 33 331 29 331 2.12e-88 269
MS.gene02087.t1 MTR_5g074740 45.631 309 157 4 28 333 23 323 2.54e-88 269
MS.gene02087.t1 MTR_5g074760 44.311 334 170 5 1 331 1 321 3.56e-88 268
MS.gene02087.t1 MTR_5g074970 44.136 324 168 4 12 331 12 326 3.17e-87 266
MS.gene02087.t1 MTR_4g074995 44.012 334 154 5 1 331 5 308 3.40e-87 265
MS.gene02087.t1 MTR_4g122640 42.715 302 170 2 30 331 38 336 6.00e-87 266
MS.gene02087.t1 MTR_5g074710 45.631 309 157 4 28 333 23 323 7.74e-87 265
MS.gene02087.t1 MTR_3g094630 45.897 329 161 5 6 331 8 322 2.75e-86 263
MS.gene02087.t1 MTR_4g030890 43.974 307 167 3 25 331 95 396 1.45e-85 265
MS.gene02087.t1 MTR_3g094670 44.444 324 165 4 6 327 8 318 5.49e-85 260
MS.gene02087.t1 MTR_1g115900 41.433 321 177 4 14 332 11 322 5.86e-85 260
MS.gene02087.t1 MTR_4g046713 43.302 321 174 4 12 331 13 326 6.09e-85 260
MS.gene02087.t1 MTR_5g049280 42.492 313 175 5 24 332 27 338 1.03e-84 260
MS.gene02087.t1 MTR_5g083860 42.943 333 173 5 1 331 8 325 2.60e-84 258
MS.gene02087.t1 MTR_2g088770 44.340 318 171 5 16 331 12 325 3.76e-84 258
MS.gene02087.t1 MTR_4g031140 41.694 307 174 3 26 332 24 325 7.31e-84 258
MS.gene02087.t1 MTR_3g466180 42.222 315 173 2 17 331 18 323 4.86e-83 255
MS.gene02087.t1 MTR_4g133800 45.000 300 154 6 35 333 46 335 5.38e-83 255
MS.gene02087.t1 MTR_3g092990 40.061 327 190 3 7 332 6 327 4.48e-80 248
MS.gene02087.t1 MTR_4g074990 43.887 319 150 5 16 331 13 305 5.16e-80 247
MS.gene02087.t1 MTR_7g107520 42.812 320 177 4 12 331 7 320 7.78e-80 247
MS.gene02087.t1 MTR_1g101830 42.157 306 171 4 26 331 23 322 8.19e-80 247
MS.gene02087.t1 MTR_5g016010 40.964 332 187 5 3 330 2 328 3.00e-78 243
MS.gene02087.t1 MTR_5g022870 41.558 308 170 7 25 331 18 316 1.08e-76 239
MS.gene02087.t1 MTR_7g026990 39.130 299 172 3 34 332 35 323 3.56e-76 238
MS.gene02087.t1 MTR_8g075100 40.909 308 172 7 25 331 21 319 4.61e-76 237
MS.gene02087.t1 MTR_3g072190 47.104 259 128 2 73 331 2 251 6.28e-76 234
MS.gene02087.t1 MTR_1g086490 37.647 340 196 5 5 331 4 340 1.46e-74 234
MS.gene02087.t1 MTR_1g086320 38.024 334 196 5 5 331 4 333 1.48e-74 234
MS.gene02087.t1 MTR_4g114210 40.938 320 177 6 17 331 8 320 2.04e-74 233
MS.gene02087.t1 MTR_1g009750 40.984 305 176 2 29 331 26 328 1.00e-73 231
MS.gene02087.t1 MTR_4g074980 41.994 331 151 8 1 331 5 294 1.11e-73 230
MS.gene02087.t1 MTR_0155s0040 40.062 322 172 9 11 331 14 315 1.11e-73 231
MS.gene02087.t1 MTR_6g043280 40.000 345 174 9 9 332 1 333 1.22e-73 231
MS.gene02087.t1 MTR_4g095450 43.077 325 165 7 8 327 11 320 4.07e-73 229
MS.gene02087.t1 MTR_2g437770 41.528 301 164 6 33 332 53 342 6.54e-73 230
MS.gene02087.t1 MTR_4g132490 38.369 331 196 4 5 331 1 327 8.77e-73 229
MS.gene02087.t1 MTR_7g029030 41.987 312 165 6 25 331 20 320 1.22e-72 228
MS.gene02087.t1 MTR_7g086820 39.088 307 174 6 28 332 18 313 5.03e-72 226
MS.gene02087.t1 MTR_2g008710 42.053 302 164 5 34 331 31 325 1.23e-71 226
MS.gene02087.t1 MTR_1g038680 38.742 302 179 4 34 331 33 332 2.32e-71 225
MS.gene02087.t1 MTR_1g025980 39.474 304 173 5 30 331 24 318 7.41e-71 224
MS.gene02087.t1 MTR_4g074980 45.455 264 126 4 1 261 5 253 1.01e-70 221
MS.gene02087.t1 MTR_1g077000 40.397 302 167 7 30 331 39 327 3.72e-70 222
MS.gene02087.t1 MTR_6g043240 43.137 306 156 9 30 332 42 332 2.56e-69 221
MS.gene02087.t1 MTR_4g127670 42.904 303 163 4 29 327 23 319 5.10e-69 219
MS.gene02087.t1 MTR_5g074860 39.319 323 146 4 12 331 11 286 2.79e-68 216
MS.gene02087.t1 MTR_3g092990 37.805 328 187 4 6 332 5 316 1.38e-67 215
MS.gene02087.t1 MTR_1g090760 36.686 338 203 6 1 333 1 332 5.54e-66 212
MS.gene02087.t1 MTR_6g043460 40.667 300 165 6 30 327 36 324 9.17e-66 211
MS.gene02087.t1 MTR_4g087965 39.344 305 178 5 29 328 41 343 1.22e-65 211
MS.gene02087.t1 MTR_1g009750 38.284 303 170 3 29 331 26 311 4.73e-65 209
MS.gene02087.t1 MTR_8g062780 36.562 320 198 4 16 333 10 326 7.75e-64 206
MS.gene02087.t1 MTR_7g086870 38.033 305 177 7 28 332 20 312 1.02e-63 205
MS.gene02087.t1 MTR_2g008160 39.871 311 175 7 26 331 20 323 2.94e-63 204
MS.gene02087.t1 MTR_2g067440 35.694 353 187 7 16 332 40 388 8.21e-63 205
MS.gene02087.t1 MTR_6g027440 39.159 309 179 6 23 331 15 314 8.33e-62 200
MS.gene02087.t1 MTR_3g105790 37.261 314 189 3 22 333 17 324 1.59e-61 200
MS.gene02087.t1 MTR_5g033470 35.370 311 192 6 27 331 70 377 5.96e-60 197
MS.gene02087.t1 MTR_0147s0010 35.185 324 174 4 27 330 74 381 2.79e-59 196
MS.gene02087.t1 MTR_2g077990 34.473 351 189 7 15 327 55 402 3.36e-59 196
MS.gene02087.t1 MTR_2g099175 33.974 312 188 6 29 332 35 336 5.57e-59 194
MS.gene02087.t1 MTR_2g078610 34.091 352 191 7 15 328 55 403 1.79e-58 194
MS.gene02087.t1 MTR_2g078280 34.118 340 183 7 15 316 55 391 1.02e-55 187
MS.gene02087.t1 MTR_2g067450 37.134 307 183 6 28 330 9 309 1.24e-54 182
MS.gene02087.t1 MTR_0286s0010 33.546 313 193 6 26 331 30 334 2.32e-54 182
MS.gene02087.t1 MTR_6g008075 33.546 313 193 6 26 331 30 334 2.32e-54 182
MS.gene02087.t1 MTR_1g066710 34.304 309 192 5 27 332 24 324 1.76e-53 179
MS.gene02087.t1 MTR_1g066640 35.065 308 189 4 28 332 25 324 6.72e-53 177
MS.gene02087.t1 MTR_1g066380 34.416 308 191 4 28 332 25 324 1.85e-52 176
MS.gene02087.t1 MTR_1g066680 34.951 309 189 5 27 332 24 323 2.11e-52 176
MS.gene02087.t1 MTR_2g008730 36.093 302 158 5 34 331 31 301 6.36e-50 169
MS.gene02087.t1 MTR_4g132110 33.003 303 192 4 33 332 35 329 7.37e-49 167
MS.gene02087.t1 MTR_2g008160 34.727 311 156 7 26 331 20 288 3.06e-47 162
MS.gene02087.t1 MTR_4g132110 32.792 308 191 6 33 332 35 334 5.06e-47 162
MS.gene02087.t1 MTR_5g074700 39.744 234 116 5 103 333 5 216 3.53e-46 157
MS.gene02087.t1 MTR_3g105790 38.075 239 144 2 97 333 12 248 3.57e-44 152
MS.gene02087.t1 MTR_3g072210 42.932 191 100 3 142 331 56 238 2.39e-43 150
MS.gene02087.t1 MTR_2g008160 44.253 174 93 3 26 199 20 189 3.16e-41 143
MS.gene02087.t1 MTR_1g066380 34.733 262 160 4 74 332 3 256 5.03e-41 144
MS.gene02087.t1 MTR_7g072490 37.751 249 92 3 76 324 2 187 1.50e-39 139
MS.gene02087.t1 MTR_3g072260 54.167 120 53 1 29 148 25 142 5.49e-37 130
MS.gene02087.t1 MTR_2g029930 56.250 112 21 3 15 112 4 101 6.50e-31 113
MS.gene02087.t1 MTR_2g078560 30.263 228 126 5 136 332 96 321 8.68e-25 103
MS.gene02087.t1 MTR_2g077980 29.682 283 150 10 92 332 11 286 1.77e-23 98.6
MS.gene02087.t1 MTR_5g058120 36.810 163 90 3 165 327 6 155 1.22e-21 93.2
MS.gene02087.t1 MTR_7g086790 30.964 197 110 5 77 271 17 189 7.19e-21 89.4
MS.gene02087.t1 MTR_4g031040 31.429 175 76 3 89 263 1 131 5.71e-19 82.4
MS.gene02087.t1 MTR_3g462850 35.664 143 87 5 194 332 9 150 5.40e-18 80.1
MS.gene02087.t1 MTR_1g089005 39.200 125 62 3 15 133 7 123 5.70e-18 80.5
MS.gene02087.t1 MTR_1g098320 45.783 83 43 1 252 334 47 127 8.05e-17 76.6
MS.gene02087.t1 MTR_4g012865 46.479 71 38 0 27 97 74 144 1.36e-16 76.3
MS.gene02087.t1 MTR_4g114220 48.718 78 30 2 57 134 30 97 9.72e-16 73.9
MS.gene02087.t1 MTR_6g048160 52.113 71 30 2 69 139 22 88 2.84e-15 70.9
MS.gene02087.t1 MTR_5g074770 37.079 89 55 1 242 330 21 108 6.49e-13 65.1
MS.gene02087.t1 MTR_7g086810 31.405 121 57 1 28 148 4 98 1.24e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02087.t1 AT2G38380 54.434 327 143 2 26 351 27 348 4.42e-124 361
MS.gene02087.t1 AT5G06720 56.467 317 138 0 15 331 17 333 4.96e-124 360
MS.gene02087.t1 AT5G06730 55.077 325 146 0 15 339 18 342 4.21e-123 358
MS.gene02087.t1 AT2G38390 52.599 327 149 2 26 351 27 348 5.39e-120 350
MS.gene02087.t1 AT3G49120 55.380 316 139 2 26 339 28 343 1.09e-117 345
MS.gene02087.t1 AT3G32980 54.717 318 142 2 26 341 27 344 7.03e-117 342
MS.gene02087.t1 AT3G49110 55.063 316 140 2 26 339 29 344 3.13e-116 341
MS.gene02087.t1 AT4G08770 52.795 322 150 2 26 345 20 341 3.31e-115 338
MS.gene02087.t1 AT4G08780 51.863 322 153 2 26 345 20 341 4.32e-113 333
MS.gene02087.t1 AT5G66390 47.006 334 173 2 1 331 1 333 2.32e-104 310
MS.gene02087.t1 AT4G36430 48.701 308 157 1 25 332 25 331 2.99e-100 299
MS.gene02087.t1 AT5G19890 50.980 306 142 4 28 331 28 327 6.26e-100 298
MS.gene02087.t1 AT5G19880 48.882 313 157 2 22 331 17 329 6.33e-100 298
MS.gene02087.t1 AT2G18150 48.013 302 156 1 30 331 36 336 1.98e-97 292
MS.gene02087.t1 AT1G44970 46.708 319 162 1 21 331 28 346 3.18e-97 292
MS.gene02087.t1 AT3G50990 48.534 307 157 1 25 331 36 341 3.83e-97 292
MS.gene02087.t1 AT2G18140 47.351 302 158 1 30 331 35 335 9.18e-96 288
MS.gene02087.t1 AT5G05340 48.366 306 147 3 28 331 28 324 1.79e-94 285
MS.gene02087.t1 AT1G14550 46.732 306 155 3 27 331 23 321 1.34e-92 280
MS.gene02087.t1 AT1G68850 45.928 307 156 6 33 332 33 336 2.00e-91 277
MS.gene02087.t1 AT1G49570 46.230 305 159 3 28 329 46 348 1.82e-90 275
MS.gene02087.t1 AT4G16270 45.033 302 163 2 30 331 50 348 1.58e-89 273
MS.gene02087.t1 AT1G14540 44.172 326 163 4 7 331 8 315 2.18e-89 271
MS.gene02087.t1 AT1G71695 46.106 321 162 6 30 348 44 355 9.02e-88 268
MS.gene02087.t1 AT2G35380 45.912 318 164 4 18 331 22 335 2.55e-83 256
MS.gene02087.t1 AT5G58390 44.839 310 157 5 26 331 17 316 2.83e-83 256
MS.gene02087.t1 AT2G22420 40.491 326 182 4 6 331 6 319 5.57e-83 255
MS.gene02087.t1 AT5G58400 44.062 320 162 6 16 331 19 325 1.02e-81 252
MS.gene02087.t1 AT3G03670 39.385 325 193 3 7 331 1 321 5.93e-81 250
MS.gene02087.t1 AT3G21770 42.540 315 177 3 19 332 18 329 6.11e-81 250
MS.gene02087.t1 AT4G11290 42.415 323 181 4 11 331 7 326 9.89e-81 249
MS.gene02087.t1 AT1G05260 41.317 334 186 6 1 332 1 326 4.21e-80 248
MS.gene02087.t1 AT2G18980 44.237 321 168 5 15 331 10 323 1.75e-79 246
MS.gene02087.t1 AT4G37530 43.689 309 169 3 26 331 23 329 1.60e-78 244
MS.gene02087.t1 AT5G15180 40.881 318 182 5 15 331 17 329 1.75e-78 244
MS.gene02087.t1 AT5G17820 39.441 322 182 6 10 331 5 313 4.82e-78 242
MS.gene02087.t1 AT5G14130 41.956 317 177 3 19 331 17 330 8.19e-78 242
MS.gene02087.t1 AT3G01190 41.049 324 181 7 9 331 7 321 1.12e-77 241
MS.gene02087.t1 AT4G30170 43.366 309 164 5 27 331 24 325 1.64e-77 241
MS.gene02087.t1 AT5G14130 41.956 317 177 3 19 331 58 371 1.92e-77 243
MS.gene02087.t1 AT5G17820 39.441 322 182 6 10 331 58 366 6.25e-77 241
MS.gene02087.t1 AT5G51890 43.087 311 162 9 26 331 22 322 7.98e-77 239
MS.gene02087.t1 AT2G41480 40.000 335 182 7 7 331 3 328 5.27e-76 237
MS.gene02087.t1 AT5G67400 40.964 332 184 5 9 331 1 329 1.73e-75 236
MS.gene02087.t1 AT5G64120 42.140 299 165 5 33 331 38 328 2.87e-74 233
MS.gene02087.t1 AT3G49960 40.122 329 187 5 7 331 7 329 1.87e-73 231
MS.gene02087.t1 AT4G37520 41.042 307 176 3 28 331 25 329 2.94e-73 230
MS.gene02087.t1 AT4G37520 40.717 307 174 4 28 331 25 326 6.93e-72 227
MS.gene02087.t1 AT4G25980 39.877 326 181 6 11 331 11 326 2.64e-71 225
MS.gene02087.t1 AT5G39580 39.514 329 183 7 4 331 6 319 4.50e-69 219
MS.gene02087.t1 AT5G42180 38.801 317 184 7 15 330 9 316 1.76e-68 218
MS.gene02087.t1 AT4G26010 39.610 308 170 7 25 331 17 309 1.78e-68 217
MS.gene02087.t1 AT4G26010 39.610 308 170 7 25 331 45 337 3.98e-68 218
MS.gene02087.t1 AT1G05240 38.387 310 173 6 30 331 26 325 5.56e-68 216
MS.gene02087.t1 AT1G05250 38.387 310 173 6 30 331 26 325 5.56e-68 216
MS.gene02087.t1 AT4G33420 38.485 330 189 8 2 331 10 325 6.40e-68 216
MS.gene02087.t1 AT4G37530 44.747 257 139 2 26 279 23 279 2.50e-67 213
MS.gene02087.t1 AT4G33420 38.485 330 189 8 2 331 57 372 3.06e-67 216
MS.gene02087.t1 AT5G64110 41.060 302 165 6 34 331 38 330 7.64e-67 214
MS.gene02087.t1 AT2G39040 40.064 312 176 6 27 331 43 350 2.41e-66 213
MS.gene02087.t1 AT4G33870 34.911 338 180 5 27 328 65 398 4.28e-66 214
MS.gene02087.t1 AT4G17690 37.864 309 181 5 30 335 26 326 3.06e-65 209
MS.gene02087.t1 AT2G34060 38.312 308 181 6 27 328 39 343 1.92e-64 208
MS.gene02087.t1 AT4G31760 36.119 335 201 5 1 331 1 326 3.06e-64 207
MS.gene02087.t1 AT2G24800 38.636 308 178 5 28 331 29 329 1.18e-63 206
MS.gene02087.t1 AT1G77100 39.550 311 172 6 26 331 20 319 6.49e-63 203
MS.gene02087.t1 AT5G64100 38.742 302 172 6 33 331 40 331 7.68e-63 204
MS.gene02087.t1 AT2G43480 35.608 337 185 10 16 331 10 335 3.04e-62 202
MS.gene02087.t1 AT5G22410 35.331 317 191 8 17 328 15 322 4.56e-62 201
MS.gene02087.t1 AT1G30870 36.721 305 176 7 33 332 54 346 1.82e-61 201
MS.gene02087.t1 AT1G34510 36.393 305 178 6 28 331 20 309 3.42e-61 199
MS.gene02087.t1 AT5G40150 35.669 314 185 5 24 331 26 328 5.11e-60 196
MS.gene02087.t1 AT2G35380 45.344 247 131 3 89 331 1 247 7.19e-60 193
MS.gene02087.t1 AT3G28200 35.873 315 180 7 25 331 16 316 1.07e-59 195
MS.gene02087.t1 AT5G47000 34.727 311 193 5 28 335 31 334 2.15e-58 192
MS.gene02087.t1 AT5G24070 34.911 338 192 10 7 332 15 336 4.55e-58 191
MS.gene02087.t1 AT1G24110 36.000 325 197 8 11 331 5 322 2.58e-56 186
MS.gene02087.t1 AT3G17070 34.718 337 202 7 3 331 13 339 2.95e-53 179
MS.gene02087.t1 AT2G37130 35.275 309 188 6 27 331 27 327 2.61e-52 176
MS.gene02087.t1 AT2G37130 35.314 303 184 6 33 331 2 296 5.13e-51 172
MS.gene02087.t1 AT4G21960 33.443 305 188 5 33 332 34 328 3.00e-50 171
MS.gene02087.t1 AT4G25980 43.939 198 97 5 11 208 56 239 4.00e-44 154
MS.gene02087.t1 AT3G17070 35.075 268 157 7 72 331 18 276 8.07e-38 137
MS.gene02087.t1 AT5G39580 39.024 205 113 4 4 208 6 198 1.30e-37 135
MS.gene02087.t1 AT2G24800 38.690 168 99 1 28 195 29 192 2.95e-34 126
MS.gene02087.t1 AT3G42570 34.653 101 65 1 98 197 49 149 3.05e-11 61.2

Find 71 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGATCTTGTTGCACTTTC+AGG 0.109767 2.2:+58017723 MS.gene02087:CDS
CCTCTTATTGAGTTGTTATT+TGG 0.149850 2.2:-58015050 None:intergenic
TAAGGCTTCCATGATCAAAA+TGG 0.205148 2.2:+58018346 MS.gene02087:CDS
TTAGCTGACTAAGATTAAAT+TGG 0.239079 2.2:-58017668 None:intergenic
TGCTAATATTTCCTCAGTTC+TGG 0.269373 2.2:+58015157 MS.gene02087:CDS
ACCATCTTCTGATGAATCTT+TGG 0.276196 2.2:-58018456 None:intergenic
CGCTTGTGGAAAACAATTCT+TGG 0.287458 2.2:-58018259 None:intergenic
ATGATCAAAATGGGTAATAT+TGG 0.290646 2.2:+58018356 MS.gene02087:CDS
TAATAGCACACTCACCAATT+TGG 0.298613 2.2:+58018160 MS.gene02087:CDS
AAACTATCTCTTCTTCCTAA+TGG 0.298706 2.2:-58017603 None:intergenic
TAGCTGACTAAGATTAAATT+GGG 0.348173 2.2:-58017667 None:intergenic
GTATGCTTGCCAGTTTCATT+AGG 0.349331 2.2:+58014682 MS.gene02087:CDS
AAGCTTCAAAGAAAAGAGTT+TGG 0.356755 2.2:-58018322 None:intergenic
TGCAGGCTCATGGTCCTGAT+TGG 0.384353 2.2:+58017574 MS.gene02087:intron
TAACAACTCAATAAGAGGTT+TGG 0.401893 2.2:+58015055 MS.gene02087:CDS
AAAGTGAAGCCTAATGAAAC+TGG 0.404928 2.2:-58014691 None:intergenic
CCAAATAACAACTCAATAAG+AGG 0.412063 2.2:+58015050 MS.gene02087:CDS
TAGCTCGAGTCGAATGTATC+TGG 0.415232 2.2:-58018194 None:intergenic
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2.2:+58014543 MS.gene02087:CDS
AGAACAACATGTCCCATTGA+TGG 0.419758 2.2:+58018134 MS.gene02087:CDS
TTGACAATGGAAGTGACATT+TGG 0.425363 2.2:-58014624 None:intergenic
CCTGATTGGGAAGTTCCATT+AGG 0.430222 2.2:+58017588 MS.gene02087:CDS
TGGAGTGGTTGGGTCCAAAT+TGG 0.439167 2.2:-58018174 None:intergenic
CTCAAACCTAAGGATTCAAA+AGG 0.440527 2.2:+58018220 MS.gene02087:CDS
AAGGCTTCCATGATCAAAAT+GGG 0.443699 2.2:+58018347 MS.gene02087:CDS
GCAGGCTCATGGTCCTGATT+GGG 0.445752 2.2:+58017575 MS.gene02087:intron
CCTAATGGAACTTCCCAATC+AGG 0.449764 2.2:-58017588 None:intergenic
TCGAATGTATCTGGAGTGGT+TGG 0.452877 2.2:-58018185 None:intergenic
TGATGAATCTTTGGTGACTT+TGG 0.453307 2.2:-58018447 None:intergenic
CAAGTGTCCTTGTAGAAGTT+AGG 0.456671 2.2:-58014600 None:intergenic
ATATTAGGTGCTCATACAAT+TGG 0.461419 2.2:+58018014 MS.gene02087:intron
CTAAGATTAAATTGGGGAGC+AGG 0.471922 2.2:-58017660 None:intergenic
TGTGTAGTGGTTGTGCTTGG+AGG 0.472368 2.2:+58014546 MS.gene02087:CDS
AAGTAGGTTGTGTTAAGAGT+TGG 0.473975 2.2:-58018101 None:intergenic
AAATTGGTGAGTGTGCTATT+AGG 0.482129 2.2:-58018158 None:intergenic
TGTGCTGATATTCTTGCACT+TGG 0.484999 2.2:+58015134 MS.gene02087:CDS
GTGTAGTGGTTGTGCTTGGA+GGG 0.502187 2.2:+58014547 MS.gene02087:CDS
GGTTGTGTTAAGAGTTGGAT+CGG 0.505458 2.2:-58018096 None:intergenic
TGTTCTCAATGTTTGTAAGT+AGG 0.516930 2.2:-58018117 None:intergenic
CTTTGGTGACTTTGGTAGCA+AGG 0.519220 2.2:-58018439 None:intergenic
CGAATGTATCTGGAGTGGTT+GGG 0.542591 2.2:-58018184 None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG 0.543829 2.2:-58018095 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.544272 2.2:-58014574 None:intergenic
AGTTGTGCATTTGAAGAGAA+GGG 0.549134 2.2:-58014573 None:intergenic
GGCAGCTTTGTGCTGTGTAG+TGG 0.549901 2.2:+58014533 MS.gene02087:CDS
ACCAAAGATTCATCAGAAGA+TGG 0.551368 2.2:+58018455 MS.gene02087:CDS
TGACATAATTTGCAGGCTCA+TGG 0.551671 2.2:+58017564 MS.gene02087:intron
AGTGGTGTTTGCGCCGCTTG+TGG 0.552455 2.2:-58018273 None:intergenic
CGAGCTACTACTCAAACCTA+AGG 0.553925 2.2:+58018210 MS.gene02087:CDS
GTGCTATTAGGTCCATCAAT+GGG 0.561855 2.2:-58018146 None:intergenic
GATTAAATTGGGGAGCAGGA+AGG 0.565650 2.2:-58017656 None:intergenic
GATACTATAGTGAGCGAGCA+AGG 0.567257 2.2:+58015020 MS.gene02087:CDS
ATATCCTCCTTTGCTGAACA+AGG 0.570048 2.2:+58017690 MS.gene02087:CDS
TGCTAAGACTTGTTTGACAA+TGG 0.574005 2.2:-58014637 None:intergenic
TGTGCTATTAGGTCCATCAA+TGG 0.576345 2.2:-58018147 None:intergenic
GTCGAGACCTTGTTCAGCAA+AGG 0.585565 2.2:-58017697 None:intergenic
GGTGCTCATACAATTGGTAG+AGG 0.588048 2.2:+58018020 MS.gene02087:intron
TCAAACCTAAGGATTCAAAA+GGG 0.596776 2.2:+58018221 MS.gene02087:CDS
GAGACCTTGTTCAGCAAAGG+AGG 0.615684 2.2:-58017694 None:intergenic
ACTTGATCCTAACTTCTACA+AGG 0.616898 2.2:+58014593 MS.gene02087:CDS
ATGAAACTGGCAAGCATACG+AGG 0.628320 2.2:-58014678 None:intergenic
GAAACTATTGACAATGGCAG+TGG 0.640788 2.2:-58018291 None:intergenic
GTTGTTGAAACTATTGACAA+TGG 0.651873 2.2:-58018297 None:intergenic
CGAGTCGAATGTATCTGGAG+TGG 0.656528 2.2:-58018189 None:intergenic
AGCTGACTAAGATTAAATTG+GGG 0.668986 2.2:-58017666 None:intergenic
GGAGTGTTAAATGAAACTCA+AGG 0.673821 2.2:+58018377 MS.gene02087:CDS
ACAATTGGTAGAGGTCAATG+TGG 0.678112 2.2:+58018029 MS.gene02087:CDS
TCAGCACAAGACACTACACT+AGG 0.678882 2.2:-58015119 None:intergenic
GAATCAAATCAAAGCCGCAG+TGG 0.686967 2.2:+58015085 MS.gene02087:CDS
TGTGGAACATACCAGAACTG+AGG 0.701189 2.2:-58015168 None:intergenic
AGGACAAGCAAGTTCCACTG+CGG 0.797507 2.2:-58015099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTATTAATGAAAG+TGG + chr2.2:58017854-58017873 MS.gene02087:intron 10.0%
!! AACAAAACAAAAAAAAATTA+AGG - chr2.2:58015802-58015821 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr2.2:58017101-58017120 None:intergenic 10.0%
!! ATATTTATGTTAAATGAAAT+AGG + chr2.2:58016772-58016791 MS.gene02087:intron 10.0%
!! CTAAAAACAAATAAATAAAT+TGG + chr2.2:58016597-58016616 MS.gene02087:intron 10.0%
!! TAAGAAGAAATTTAATTATA+AGG - chr2.2:58015506-58015525 None:intergenic 10.0%
!! TATTTATGTTAAATGAAATA+GGG + chr2.2:58016773-58016792 MS.gene02087:intron 10.0%
!!! AATTTTTTTTTGTTTTGTTA+TGG + chr2.2:58015803-58015822 MS.gene02087:intron 10.0%
!!! CAATTTATTTATTTGTTTTT+AGG - chr2.2:58016599-58016618 None:intergenic 10.0%
!!! GTTTTTTTTTTGATAAAAAA+AGG - chr2.2:58016487-58016506 None:intergenic 10.0%
!! AAAAAGTTTATTTAAAGGAA+AGG - chr2.2:58017418-58017437 None:intergenic 15.0%
!! AACTTATTTAATATCTAACA+CGG - chr2.2:58015944-58015963 None:intergenic 15.0%
!! AATTTAAAGAAAATATTGAG+TGG + chr2.2:58016727-58016746 MS.gene02087:intron 15.0%
!! ACAAAATTGTGAATATTTAT+AGG - chr2.2:58016817-58016836 None:intergenic 15.0%
!! ATATATGTTATATCTATGTA+AGG + chr2.2:58014965-58014984 MS.gene02087:intron 15.0%
!! CAAAATTGTGAATATTTATA+GGG - chr2.2:58016816-58016835 None:intergenic 15.0%
!! CTAAAAACATTACTAAAATT+TGG + chr2.2:58014929-58014948 MS.gene02087:intron 15.0%
!! GAGAAAAAAAGTTTATTTAA+AGG - chr2.2:58017423-58017442 None:intergenic 15.0%
!! TAAAATTCTGAATATTTACA+TGG + chr2.2:58016975-58016994 MS.gene02087:intron 15.0%
!! TAATTAACCCAATAAAATAT+TGG + chr2.2:58017008-58017027 MS.gene02087:intron 15.0%
!! TATATGTTATATCTATGTAA+GGG + chr2.2:58014966-58014985 MS.gene02087:intron 15.0%
!! TGTATGAGAAATAATAAAAT+TGG + chr2.2:58016297-58016316 MS.gene02087:intron 15.0%
!!! AAAGTGTGATTTTAATTTAT+AGG - chr2.2:58016848-58016867 None:intergenic 15.0%
!!! AAGTGTGATTTTAATTTATA+GGG - chr2.2:58016847-58016866 None:intergenic 15.0%
!!! GTATGCTTTTAAAAAATATT+AGG + chr2.2:58017999-58018018 MS.gene02087:intron 15.0%
!!! TTAAAATTTGTTTTAAGTCT+CGG - chr2.2:58015202-58015221 None:intergenic 15.0%
!!! TTCAAAACCAATATTTTATT+GGG - chr2.2:58017018-58017037 None:intergenic 15.0%
!!! TTTCAAAACCAATATTTTAT+TGG - chr2.2:58017019-58017038 None:intergenic 15.0%
!!! TTTTTAGAGTATTAGAAAAT+TGG - chr2.2:58014916-58014935 None:intergenic 15.0%
!! AAAAATGTTAGATGAAAAGA+AGG + chr2.2:58016342-58016361 MS.gene02087:intron 20.0%
!! AAATATATTACTCTTCGTAT+TGG - chr2.2:58014892-58014911 None:intergenic 20.0%
!! ACTTATTTAATATCTAACAC+GGG - chr2.2:58015943-58015962 None:intergenic 20.0%
!! CTATTGATATAAAGACTAAA+AGG + chr2.2:58017351-58017370 MS.gene02087:intron 20.0%
!! TATTGGGTTAATTAAGTAAA+TGG - chr2.2:58017002-58017021 None:intergenic 20.0%
!! TTGGTGCATATTTAAATTTA+TGG - chr2.2:58014873-58014892 None:intergenic 20.0%
!! TTTAGATTTGTAGTATATGA+TGG - chr2.2:58015395-58015414 None:intergenic 20.0%
!!! AAAACTTCCATCAATATTTT+TGG - chr2.2:58016908-58016927 None:intergenic 20.0%
!!! ACTTTAATAGTCTTATCATT+AGG + chr2.2:58015354-58015373 MS.gene02087:intron 20.0%
!!! CATATATTTCTACATATATG+TGG + chr2.2:58017801-58017820 MS.gene02087:intron 20.0%
!!! CTATTTTTTTTTTTTTGGTC+AGG - chr2.2:58015738-58015757 None:intergenic 20.0%
!!! GAAATAATAAAATTGGTGTT+TGG + chr2.2:58016304-58016323 MS.gene02087:intron 20.0%
!!! GCTAATGGAAAATTTTTATA+GGG + chr2.2:58016945-58016964 MS.gene02087:intron 20.0%
!!! TAAACTTTTAACAAAATCAC+AGG - chr2.2:58014807-58014826 None:intergenic 20.0%
!!! TATTGATGGAAGTTTTTTAT+AGG + chr2.2:58016912-58016931 MS.gene02087:intron 20.0%
!!! TCAATTAGTTTTTTTGTTTG+AGG - chr2.2:58016529-58016548 None:intergenic 20.0%
!!! TGCTAATGGAAAATTTTTAT+AGG + chr2.2:58016944-58016963 MS.gene02087:intron 20.0%
!!! TTTTGTTATGGTTTTAGTTT+TGG + chr2.2:58015815-58015834 MS.gene02087:intron 20.0%
!!! TTTTGTTTGAGGAAAAAAAA+AGG - chr2.2:58016518-58016537 None:intergenic 20.0%
! AAAGGAAAGGAATTAAAGAA+AGG - chr2.2:58017405-58017424 None:intergenic 25.0%
! AGAGAAAAAAATCGATTGAA+AGG + chr2.2:58016187-58016206 MS.gene02087:intron 25.0%
! AGATTTAATTGTGTCAATTG+AGG + chr2.2:58017912-58017931 MS.gene02087:intron 25.0%
! ATAGGAACTAAAAATGCTAA+TGG + chr2.2:58016930-58016949 MS.gene02087:intron 25.0%
! ATGATCAAAATGGGTAATAT+TGG + chr2.2:58018356-58018375 MS.gene02087:CDS 25.0%
! CATAGTACTATAAAATGTCT+AGG + chr2.2:58015661-58015680 MS.gene02087:intron 25.0%
! CCACATATATATACATAATG+AGG - chr2.2:58017968-58017987 None:intergenic 25.0%
! CCTCATTATGTATATATATG+TGG + chr2.2:58017965-58017984 MS.gene02087:intron 25.0%
! GAGAAAAAAATCGATTGAAA+GGG + chr2.2:58016188-58016207 MS.gene02087:intron 25.0%
! TAGCTGACTAAGATTAAATT+GGG - chr2.2:58017670-58017689 None:intergenic 25.0%
! TGAAGACTAAAATCAACAAT+AGG - chr2.2:58015898-58015917 None:intergenic 25.0%
! TTAGCTGACTAAGATTAAAT+TGG - chr2.2:58017671-58017690 None:intergenic 25.0%
!! AAAGGTTCGATTAGTTATTA+TGG - chr2.2:58016469-58016488 None:intergenic 25.0%
!! ACAATAGGAAGAAATTTTGT+AGG - chr2.2:58015883-58015902 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG + chr2.2:58016880-58016899 MS.gene02087:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG + chr2.2:58016881-58016900 MS.gene02087:intron 25.0%
!! GTACAACTATAGCTTTTTAT+AGG - chr2.2:58017765-58017784 None:intergenic 25.0%
!!! AATATTACCCATTTTGATCA+TGG - chr2.2:58018357-58018376 None:intergenic 25.0%
!!! AGGTTGATCTTTTTCTATTT+AGG - chr2.2:58015718-58015737 None:intergenic 25.0%
!!! TAAAGAAAGGCATTTTTTAG+AGG - chr2.2:58017392-58017411 None:intergenic 25.0%
!!! TACACTTTTTATTCTTGCAT+TGG - chr2.2:58016076-58016095 None:intergenic 25.0%
!!! TCTAACATTTTTTCTTCTTC+AGG - chr2.2:58016334-58016353 None:intergenic 25.0%
!!! TCTTTTCTTTGAAGCTTTTA+AGG + chr2.2:58018328-58018347 MS.gene02087:CDS 25.0%
AAACTATCTCTTCTTCCTAA+TGG - chr2.2:58017606-58017625 None:intergenic 30.0%
AAGCTTCAAAGAAAAGAGTT+TGG - chr2.2:58018325-58018344 None:intergenic 30.0%
AGCTGACTAAGATTAAATTG+GGG - chr2.2:58017669-58017688 None:intergenic 30.0%
ATATTAGGTGCTCATACAAT+TGG + chr2.2:58018014-58018033 MS.gene02087:intron 30.0%
CAATAATGAATTTGTCCAAG+TGG + chr2.2:58016103-58016122 MS.gene02087:intron 30.0%
CAATTAAATCTCGTTAGAGA+CGG - chr2.2:58017903-58017922 None:intergenic 30.0%
CCAAATAACAACTCAATAAG+AGG + chr2.2:58015050-58015069 MS.gene02087:CDS 30.0%
GTTAGATGAAAAGAAGGTTT+GGG + chr2.2:58016348-58016367 MS.gene02087:intron 30.0%
GTTGTTGAAACTATTGACAA+TGG - chr2.2:58018300-58018319 None:intergenic 30.0%
TAACAACTCAATAAGAGGTT+TGG + chr2.2:58015055-58015074 MS.gene02087:CDS 30.0%
TCAAACCTAAGGATTCAAAA+GGG + chr2.2:58018221-58018240 MS.gene02087:CDS 30.0%
TGATTCTATCAAACTCAATG+TGG - chr2.2:58014777-58014796 None:intergenic 30.0%
TGTTAGATGAAAAGAAGGTT+TGG + chr2.2:58016347-58016366 MS.gene02087:intron 30.0%
TGTTCTCAATGTTTGTAAGT+AGG - chr2.2:58018120-58018139 None:intergenic 30.0%
TTAGATGAAAAGAAGGTTTG+GGG + chr2.2:58016349-58016368 MS.gene02087:intron 30.0%
TTAGGGACCAAAAATATTGA+TGG + chr2.2:58016898-58016917 MS.gene02087:intron 30.0%
! CCTCTTATTGAGTTGTTATT+TGG - chr2.2:58015053-58015072 None:intergenic 30.0%
! CTCTTCTTTTCATATCACAT+TGG + chr2.2:58014512-58014531 MS.gene02087:CDS 30.0%
! CTTGTGATTCTAATTTTTCC+TGG + chr2.2:58017541-58017560 MS.gene02087:intron 30.0%
!! ACTTTCAAGTTACTTACAGA+TGG - chr2.2:58015690-58015709 None:intergenic 30.0%
!!! ATTTTTTTCTCTCATACGCA+TGG - chr2.2:58016179-58016198 None:intergenic 30.0%
!!! TTTTTTTCTCTCATACGCAT+GGG - chr2.2:58016178-58016197 None:intergenic 30.0%
AAAGTGAAGCCTAATGAAAC+TGG - chr2.2:58014694-58014713 None:intergenic 35.0%
AAGAAACCTAGCATCAAAGA+TGG - chr2.2:58015641-58015660 None:intergenic 35.0%
AAGGCTTCCATGATCAAAAT+GGG + chr2.2:58018347-58018366 MS.gene02087:CDS 35.0%
AAGTAGGTTGTGTTAAGAGT+TGG - chr2.2:58018104-58018123 None:intergenic 35.0%
AAGTTGTGCATTTGAAGAGA+AGG - chr2.2:58014577-58014596 None:intergenic 35.0%
ACCAAAGATTCATCAGAAGA+TGG + chr2.2:58018455-58018474 MS.gene02087:CDS 35.0%
ACCATCTTCTGATGAATCTT+TGG - chr2.2:58018459-58018478 None:intergenic 35.0%
ACTTGATCCTAACTTCTACA+AGG + chr2.2:58014593-58014612 MS.gene02087:CDS 35.0%
AGTTGTGCATTTGAAGAGAA+GGG - chr2.2:58014576-58014595 None:intergenic 35.0%
ATGCTTAAGGAAAATGTCAC+AGG - chr2.2:58016877-58016896 None:intergenic 35.0%
CTCAAACCTAAGGATTCAAA+AGG + chr2.2:58018220-58018239 MS.gene02087:CDS 35.0%
TAAGGCTTCCATGATCAAAA+TGG + chr2.2:58018346-58018365 MS.gene02087:CDS 35.0%
TAATAGCACACTCACCAATT+TGG + chr2.2:58018160-58018179 MS.gene02087:CDS 35.0%
TCTCTTCTTGAATAGTTGAC+AGG - chr2.2:58015550-58015569 None:intergenic 35.0%
TCTTGAATAGTTGACAGGTT+TGG - chr2.2:58015545-58015564 None:intergenic 35.0%
TGCTAATATTTCCTCAGTTC+TGG + chr2.2:58015157-58015176 MS.gene02087:CDS 35.0%
TGCTTAAGGAAAATGTCACA+GGG - chr2.2:58016876-58016895 None:intergenic 35.0%
TGTCAACTATTCAAGAAGAG+AGG + chr2.2:58015549-58015568 MS.gene02087:intron 35.0%
TTGACAATGGAAGTGACATT+TGG - chr2.2:58014627-58014646 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG - chr2.2:58016890-58016909 None:intergenic 35.0%
! AAATTGGTGAGTGTGCTATT+AGG - chr2.2:58018161-58018180 None:intergenic 35.0%
! AGTATATGATGGAATGAGCA+GGG - chr2.2:58015384-58015403 None:intergenic 35.0%
! CAAGAATTGTTTTCCACAAG+CGG + chr2.2:58018260-58018279 MS.gene02087:CDS 35.0%
! GGAGTGTTAAATGAAACTCA+AGG + chr2.2:58018377-58018396 MS.gene02087:CDS 35.0%
! TAGTATATGATGGAATGAGC+AGG - chr2.2:58015385-58015404 None:intergenic 35.0%
! TGATGAATCTTTGGTGACTT+TGG - chr2.2:58018450-58018469 None:intergenic 35.0%
! TGCTAAGACTTGTTTGACAA+TGG - chr2.2:58014640-58014659 None:intergenic 35.0%
ACAATTGGTAGAGGTCAATG+TGG + chr2.2:58018029-58018048 MS.gene02087:CDS 40.0%
ACCCATGACCACATGTTTAA+AGG - chr2.2:58016144-58016163 None:intergenic 40.0%
ACTGATCTTGTTGCACTTTC+AGG + chr2.2:58017723-58017742 MS.gene02087:CDS 40.0%
AGAACAACATGTCCCATTGA+TGG + chr2.2:58018134-58018153 MS.gene02087:CDS 40.0%
ATATCCTCCTTTGCTGAACA+AGG + chr2.2:58017690-58017709 MS.gene02087:CDS 40.0%
ATGAATGTGAAAGTGACACG+TGG + chr2.2:58017066-58017085 MS.gene02087:intron 40.0%
ATGAATGTTGAAGTGACACG+TGG + chr2.2:58017301-58017320 MS.gene02087:intron 40.0%
CAAGTGTCCTTGTAGAAGTT+AGG - chr2.2:58014603-58014622 None:intergenic 40.0%
CCCATGACCACATGTTTAAA+GGG - chr2.2:58016143-58016162 None:intergenic 40.0%
CCCTTTAAACATGTGGTCAT+GGG + chr2.2:58016140-58016159 MS.gene02087:intron 40.0%
CGCTTGTGGAAAACAATTCT+TGG - chr2.2:58018262-58018281 None:intergenic 40.0%
CTAAGATTAAATTGGGGAGC+AGG - chr2.2:58017663-58017682 None:intergenic 40.0%
GAAACTATTGACAATGGCAG+TGG - chr2.2:58018294-58018313 None:intergenic 40.0%
GGTTGTGTTAAGAGTTGGAT+CGG - chr2.2:58018099-58018118 None:intergenic 40.0%
GTATGCTTGCCAGTTTCATT+AGG + chr2.2:58014682-58014701 MS.gene02087:CDS 40.0%
GTTGTGTTAAGAGTTGGATC+GGG - chr2.2:58018098-58018117 None:intergenic 40.0%
TAAGTCTCGGTTAGAAGATG+TGG - chr2.2:58015189-58015208 None:intergenic 40.0%
TCCCTTTAAACATGTGGTCA+TGG + chr2.2:58016139-58016158 MS.gene02087:intron 40.0%
TCGATTGAAAGGGAAGAAAG+TGG + chr2.2:58016198-58016217 MS.gene02087:intron 40.0%
! ACAAGCCCTTTTGAATCCTT+AGG - chr2.2:58018229-58018248 None:intergenic 40.0%
! GTGCTATTAGGTCCATCAAT+GGG - chr2.2:58018149-58018168 None:intergenic 40.0%
! TCTTCACTAGTTTAGAGACC+CGG + chr2.2:58015912-58015931 MS.gene02087:intron 40.0%
! TGACATAATTTGCAGGCTCA+TGG + chr2.2:58017564-58017583 MS.gene02087:intron 40.0%
! TGTGCTATTAGGTCCATCAA+TGG - chr2.2:58018150-58018169 None:intergenic 40.0%
! TGTGCTGATATTCTTGCACT+TGG + chr2.2:58015134-58015153 MS.gene02087:CDS 40.0%
! TGTTGCACTTTCAGGTATGA+AGG + chr2.2:58017731-58017750 MS.gene02087:intron 40.0%
! TTCCTGGTGACATAATTTGC+AGG + chr2.2:58017557-58017576 MS.gene02087:intron 40.0%
AACCTAGCATCAAAGATGGC+CGG - chr2.2:58015637-58015656 None:intergenic 45.0%
AGCCTGCAAATTATGTCACC+AGG - chr2.2:58017562-58017581 None:intergenic 45.0%
ATGAAACTGGCAAGCATACG+AGG - chr2.2:58014681-58014700 None:intergenic 45.0%
CCTAATGGAACTTCCCAATC+AGG - chr2.2:58017591-58017610 None:intergenic 45.0%
CCTGATTGGGAAGTTCCATT+AGG + chr2.2:58017588-58017607 MS.gene02087:CDS 45.0%
CGAGCTACTACTCAAACCTA+AGG + chr2.2:58018210-58018229 MS.gene02087:CDS 45.0%
CTTGGGTCCCTTTAAACATG+TGG + chr2.2:58016133-58016152 MS.gene02087:intron 45.0%
GAATCAAATCAAAGCCGCAG+TGG + chr2.2:58015085-58015104 MS.gene02087:CDS 45.0%
GATACTATAGTGAGCGAGCA+AGG + chr2.2:58015020-58015039 MS.gene02087:CDS 45.0%
GATTAAATTGGGGAGCAGGA+AGG - chr2.2:58017659-58017678 None:intergenic 45.0%
GGTGCTCATACAATTGGTAG+AGG + chr2.2:58018020-58018039 MS.gene02087:intron 45.0%
GTCCAAGTGGTAAGAGTCTT+GGG + chr2.2:58016116-58016135 MS.gene02087:intron 45.0%
TAGCTCGAGTCGAATGTATC+TGG - chr2.2:58018197-58018216 None:intergenic 45.0%
TCAGCACAAGACACTACACT+AGG - chr2.2:58015122-58015141 None:intergenic 45.0%
TGTCCAAGTGGTAAGAGTCT+TGG + chr2.2:58016115-58016134 MS.gene02087:intron 45.0%
TGTGGAACATACCAGAACTG+AGG - chr2.2:58015171-58015190 None:intergenic 45.0%
! AGCATTGAAAGCCTCTTAGC+CGG + chr2.2:58015615-58015634 MS.gene02087:intron 45.0%
! CGAATGTATCTGGAGTGGTT+GGG - chr2.2:58018187-58018206 None:intergenic 45.0%
! CTTTGGTGACTTTGGTAGCA+AGG - chr2.2:58018442-58018461 None:intergenic 45.0%
! TCGAATGTATCTGGAGTGGT+TGG - chr2.2:58018188-58018207 None:intergenic 45.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr2.2:58017243-58017262 MS.gene02087:intron 5.0%
!!! TTTTTCTATTTTTTTTTTTT+TGG - chr2.2:58015743-58015762 None:intergenic 5.0%
AGGACAAGCAAGTTCCACTG+CGG - chr2.2:58015102-58015121 None:intergenic 50.0%
ATATCTAACACGGGCAACGC+CGG - chr2.2:58015934-58015953 None:intergenic 50.0%
ATCAAAGATGGCCGGCTAAG+AGG - chr2.2:58015629-58015648 None:intergenic 50.0%
CGAGTCGAATGTATCTGGAG+TGG - chr2.2:58018192-58018211 None:intergenic 50.0%
GACCCAAGACTCTTACCACT+TGG - chr2.2:58016121-58016140 None:intergenic 50.0%
GAGACCTTGTTCAGCAAAGG+AGG - chr2.2:58017697-58017716 None:intergenic 50.0%
GTCGAGACCTTGTTCAGCAA+AGG - chr2.2:58017700-58017719 None:intergenic 50.0%
GTGTAGTGGTTGTGCTTGGA+GGG + chr2.2:58014547-58014566 MS.gene02087:CDS 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG + chr2.2:58014543-58014562 MS.gene02087:CDS 50.0%
TGGAGTGGTTGGGTCCAAAT+TGG - chr2.2:58018177-58018196 None:intergenic 50.0%
TGTGTAGTGGTTGTGCTTGG+AGG + chr2.2:58014546-58014565 MS.gene02087:CDS 50.0%
! GTGGTCATGGGTTTGTTTCG+TGG + chr2.2:58016152-58016171 MS.gene02087:intron 50.0%
AGCCGGCCATCTTTGATGCT+AGG + chr2.2:58015632-58015651 MS.gene02087:intron 55.0%
GCAGGCTCATGGTCCTGATT+GGG + chr2.2:58017575-58017594 MS.gene02087:intron 55.0%
TATCTAACACGGGCAACGCC+GGG - chr2.2:58015933-58015952 None:intergenic 55.0%
TGCAGGCTCATGGTCCTGAT+TGG + chr2.2:58017574-58017593 MS.gene02087:intron 55.0%
! GGCAGCTTTGTGCTGTGTAG+TGG + chr2.2:58014533-58014552 MS.gene02087:CDS 55.0%
AGTGGTGTTTGCGCCGCTTG+TGG - chr2.2:58018276-58018295 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58014507 58018496 58014507 ID=MS.gene02087
chr2.2 mRNA 58014507 58018496 58014507 ID=MS.gene02087.t1;Parent=MS.gene02087
chr2.2 exon 58014507 58014731 58014507 ID=MS.gene02087.t1.exon1;Parent=MS.gene02087.t1
chr2.2 CDS 58014507 58014731 58014507 ID=cds.MS.gene02087.t1;Parent=MS.gene02087.t1
chr2.2 exon 58014987 58015178 58014987 ID=MS.gene02087.t1.exon2;Parent=MS.gene02087.t1
chr2.2 CDS 58014987 58015178 58014987 ID=cds.MS.gene02087.t1;Parent=MS.gene02087.t1
chr2.2 exon 58017579 58017744 58017579 ID=MS.gene02087.t1.exon3;Parent=MS.gene02087.t1
chr2.2 CDS 58017579 58017744 58017579 ID=cds.MS.gene02087.t1;Parent=MS.gene02087.t1
chr2.2 exon 58018021 58018496 58018021 ID=MS.gene02087.t1.exon4;Parent=MS.gene02087.t1
chr2.2 CDS 58018021 58018496 58018021 ID=cds.MS.gene02087.t1;Parent=MS.gene02087.t1
Gene Sequence

>MS.gene02087

ATGAACTCTTCTTTTCATATCACATTGGCAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTTCCCTTCTCTTCAAATGCACAACTTGATCCTAACTTCTACAAGGACACTTGTCCAAATGTCACTTCCATTGTCAAACAAGTCTTAGCAAACGTTTCTCAGACAGATCCTCGTATGCTTGCCAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGTATGTATTATATATAATAATTGCGATGTGATTTTGTTGAAGCCACATTGAGTTTGATAGAATCACGAAACACCTGTGATTTTGTTAAAAGTTTAAAGTATCAAACTACAATGCTACTACGTGATTTTGTCAAACTCACCATAAATTTAAATATGCACCAATACGAAGAGTAATATATTTACCAATTTTCTAATACTCTAAAAACATTACTAAAATTTGGATATTTGTAGCTCATATATGTTATATCTATGTAAGGGCTGTGATGCATCAATCTTGTTGAATGACACTGATACTATAGTGAGCGAGCAAGGAGCTGTGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAGCCGCAGTGGAACTTGCTTGTCCTAGTGTAGTGTCTTGTGCTGATATTCTTGCACTTGGTGCTAATATTTCCTCAGTTCTGGTATGTTCCACATCTTCTAACCGAGACTTAAAACAAATTTTAATATATGTGATATATATATATATTTTTTTGAGTAAGTATATATGTGACATTTTTTGTCTACACAAAAGTTTTTTATTTTATTTTATAAATTTATTAAGAAATAATTTTTCATTAGTAGATATCTAAAACGAGAACTTTAATAGTCTTATCATTAGGTTGACCCTGCTCATTCCATCATATACTACAAATCTAAATATGCTCTCAAATTTTCTTTTCTTTTTCTTTTTGATGACATCAGAGAAACTTAACATGTTTCTTTTAATTTTTTAAATGCATATTCTTCCTTATAATTAAATTTCTTCTTATTTTGTTCTTCATTCTCCAAACCTGTCAACTATTCAAGAAGAGAGGAAAAAAATTAAAATGAGTTGATGAATTTGTTATACAAGTCATTAGCATTGAAAGCCTCTTAGCCGGCCATCTTTGATGCTAGGTTTCTTCATAGTACTATAAAATGTCTAGGATTCCATCTGTAAGTAACTTGAAAGTTTCAACCTAAATAGAAAAAGATCAACCTGACCAAAAAAAAAAAAATAGAAAAAGATCAATCAATTAAAATATATTATTTTAAGTTTCAACCTTAATTTTTTTTTGTTTTGTTATGGTTTTAGTTTTGGCAAATATGCTACTTTTTATTTCTAGTTCTTTTTTTTTTTAATCCTACAAAATTTCTTCCTATTGTTGATTTTAGTCTTCACTAGTTTAGAGACCCGGCGTTGCCCGTGTTAGATATTAAATAAGTTTTATAAGTTTGTGTGCACGAATACACGTGTCAGTATATTAGATTGAATTTATTTAAATTTACAATTATAATAATATCATAAAAATAAATATAAATGATGAGATGAATGTCCAATGCAAGAATAAAAAGTGTAACAAAATCAATAATGAATTTGTCCAAGTGGTAAGAGTCTTGGGTCCCTTTAAACATGTGGTCATGGGTTTGTTTCGTGGCCCATGCGTATGAGAGAAAAAAATCGATTGAAAGGGAAGAAAGTGGTTGAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCAAAGTATATGTATGAGAAATAATAAAATTGGTGTTTGGCAAACCTGAAGAAGAAAAAATGTTAGATGAAAAGAAGGTTTGGGGATTCTGCTTGTGCTCAAAATATGTAAATATGTGATTAACGAAAATTTATTAATTTATAGTTAACATTTGCATTAGAATATGCTGCTAAAAGATACCATAATAACTAATCGAACCTTTTTTTATCAAAAAAAAAACTAATCGAACCTTTTTTTTTCCTCAAACAAAAAAACTAATTGAATGATATATTGCTAAAAGATTAGTAATAACTAATTGAAGCTTCTTTTCCTAAAAACAAATAAATAAATTGGAGTCTTTTAATCATAAAATAAGATCGTATATATGTAAACTTTGTTGAAAGTATTATTGTAGTTTGTTGAGATATTTCTGCTACATAAAATATTAGAAATTCAATAAAAATTTAAAGAAAATATTGAGTGGATAAGATCAAAATGTTGTTGAGATATTTATGTTAAATGAAATAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCACAATTTTGTTTTTAGTCCCTATAAATTAAAATCACACTTTTTAGTCCCTGTGACATTTTCCTTAAGCATTTTAGGGACCAAAAATATTGATGGAAGTTTTTTATAGGAACTAAAAATGCTAATGGAAAATTTTTATAGGGACTAAAATAAAATTCTGAATATTTACATGGACCATTTACTTAATTAACCCAATAAAATATTGGTTTTGAAAAATAGAAAAATAATAAAAATATTGAGAATGAATGTGAAAGTGACACGTGGCATCAAAAACCTTACTTTATATATATACTATTGATATTGTTGATGATTGATTGATGTGTAGTTTGTTGAGATATTTCTGCTACATAAAATATTAGAAATTCAATAAAAATTTAAAGAAAATACTGAGTGCATAAGATCAAAAGTTTGTTGAGATATTTATGTTAAATAAAATATTGGTTTTTAAAAATAAAAAAATAATAAAAATATTGAAAATGAATGTTGAAGTGACACGTGGCATAAAAAACCTTACTTTATATATATACTATTGATATAAAGACTAAAAGGAATATTTGACAAGTACCTCTAAAAAATGCCTTTCTTTAATTCCTTTCCTTTAAATAAACTTTTTTTCTCACGACTTATTATTATTACTACTACTTGTATGATTTTTTTTCATTTTCATTTTATGTTTTTACTATTATACTAGTGTGTGTGAGACTATTATTTTTTTACTTGTGATTCTAATTTTTCCTGGTGACATAATTTGCAGGCTCATGGTCCTGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTGAATGCAAATCAAAGTCTTGCTAATTCAAGCCTTCCTGCTCCCCAATTTAATCTTAGTCAGCTAATATCCTCCTTTGCTGAACAAGGTCTCGACATTACTGATCTTGTTGCACTTTCAGGTATGAAGGTTTTGTCTCCTATAAAAAGCTATAGTTGTACGCAACATTAGTGTGTACATATATTTCTACATATATGTGGTCTTTTCTAAGTAAAAAAATTGAAAAAGAGAAAATTATTATTAATGAAAGTGGCATTAATATTAATCAATTTACAACCGTCTCTAACGAGATTTAATTGTGTCAATTGAGGTTATAAAAAGTTAAAATTATTGAGCTGATACCTCATTATGTATATATATGTGGTGTCTAATTGTGTATGCTTTTAAAAAATATTAGGTGCTCATACAATTGGTAGAGGTCAATGTGGATTCTTCTTTGATCGATTATACAATTTCAACGATACTAGAAAACCCGATCCAACTCTTAACACAACCTACTTACAAACATTGAGAACAACATGTCCCATTGATGGACCTAATAGCACACTCACCAATTTGGACCCAACCACTCCAGATACATTCGACTCGAGCTACTACTCAAACCTAAGGATTCAAAAGGGCTTGTTTCAGAGTGACCAAGAATTGTTTTCCACAAGCGGCGCAAACACCACTGCCATTGTCAATAGTTTCAACAACAACCAAACTCTTTTCTTTGAAGCTTTTAAGGCTTCCATGATCAAAATGGGTAATATTGGAGTGTTAAATGAAACTCAAGGTGAAGTTAGAACACACTGTAACTTTGTTAATTCTGTTAGCCTTGCTACCAAAGTCACCAAAGATTCATCAGAAGATGGTATTGTTAGCTCATTCTAA
Protein sequence

>MS.gene02087.t1

MNSSFHITLAALCCVVVVLGGFPFSSNAQLDPNFYKDTCPNVTSIVKQVLANVSQTDPRMLASFIRLHFHDCFVQGCDASILLNDTDTIVSEQGAVPNNNSIRGLDVVNQIKAAVELACPSVVSCADILALGANISSVLAHGPDWEVPLGRRDSLNANQSLANSSLPAPQFNLSQLISSFAEQGLDITDLVALSGAHTIGRGQCGFFFDRLYNFNDTRKPDPTLNTTYLQTLRTTCPIDGPNSTLTNLDPTTPDTFDSSYYSNLRIQKGLFQSDQELFSTSGANTTAIVNSFNNNQTLFFEAFKASMIKMGNIGVLNETQGEVRTHCNFVNSVSLATKVTKDSSEDGIVSSF