AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03138

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03138.t1 MTR_2g029730 93.043 345 24 0 1 345 1 345 0.0 656
MS.gene03138.t1 MTR_2g029560 84.348 345 53 1 1 345 1 344 0.0 593
MS.gene03138.t1 MTR_2g029820 64.045 356 116 3 1 345 1 355 7.33e-162 456
MS.gene03138.t1 MTR_2g029740 66.176 340 109 2 1 335 1 339 6.25e-161 454
MS.gene03138.t1 MTR_2g029800 65.698 344 109 3 11 345 10 353 4.17e-160 452
MS.gene03138.t1 MTR_2g029830 66.867 332 103 1 8 332 4 335 4.21e-159 449
MS.gene03138.t1 MTR_2g029815 64.589 353 116 3 1 345 1 352 5.04e-159 449
MS.gene03138.t1 MTR_2g029750 66.163 331 107 1 7 332 6 336 3.27e-157 444
MS.gene03138.t1 MTR_2g029850 64.689 354 114 4 1 345 1 352 2.50e-155 440
MS.gene03138.t1 MTR_2g029860 65.116 344 111 3 11 345 10 353 1.10e-151 431
MS.gene03138.t1 MTR_2g028980 63.501 337 117 2 1 332 1 336 3.36e-151 429
MS.gene03138.t1 MTR_2g029910 62.391 343 121 3 11 345 11 353 1.61e-148 422
MS.gene03138.t1 MTR_2g029830 72.624 263 72 0 70 332 5 267 2.92e-137 391
MS.gene03138.t1 MTR_7g093370 56.869 313 134 1 16 327 60 372 7.00e-121 353
MS.gene03138.t1 MTR_1g054205 53.560 323 149 1 6 327 5 327 1.94e-118 345
MS.gene03138.t1 MTR_5g021060 51.155 303 147 1 24 326 29 330 8.94e-110 323
MS.gene03138.t1 MTR_4g125940 54.605 304 134 2 25 326 28 329 4.78e-109 322
MS.gene03138.t1 MTR_8g076820 49.175 303 153 1 24 326 29 330 2.04e-106 315
MS.gene03138.t1 MTR_5g017860 52.174 299 139 3 29 326 31 326 2.77e-103 306
MS.gene03138.t1 MTR_4g125940 57.091 275 114 2 54 326 2 274 6.10e-103 304
MS.gene03138.t1 MTR_5g017850 51.505 299 141 3 29 326 31 326 3.04e-102 304
MS.gene03138.t1 MTR_5g074970 47.147 333 160 5 1 326 3 326 4.52e-101 301
MS.gene03138.t1 MTR_1g022970 49.007 302 154 0 25 326 46 347 8.73e-101 301
MS.gene03138.t1 MTR_2g040000 50.164 305 147 2 25 326 29 331 1.05e-100 300
MS.gene03138.t1 MTR_3g466200 47.352 321 156 5 10 326 9 320 1.51e-96 289
MS.gene03138.t1 MTR_4g029200 48.852 305 147 2 22 326 43 338 1.59e-96 290
MS.gene03138.t1 MTR_4g122640 46.341 328 166 3 6 326 12 336 5.13e-96 288
MS.gene03138.t1 MTR_3g094650 50.662 302 138 3 23 322 26 318 5.97e-94 283
MS.gene03138.t1 MTR_4g029190 48.580 317 151 5 13 326 33 340 9.81e-94 283
MS.gene03138.t1 MTR_7g072510 47.020 302 151 2 25 326 20 312 1.08e-93 281
MS.gene03138.t1 MTR_5g074760 48.534 307 147 5 25 328 25 323 2.22e-92 279
MS.gene03138.t1 MTR_7g072480 47.697 304 150 2 23 326 22 316 2.33e-92 278
MS.gene03138.t1 MTR_5g083860 48.026 304 147 3 25 326 31 325 3.04e-92 278
MS.gene03138.t1 MTR_4g083710 46.224 331 166 5 1 326 1 324 1.35e-91 277
MS.gene03138.t1 MTR_2g084110 47.987 298 146 2 29 326 29 317 1.47e-91 276
MS.gene03138.t1 MTR_5g014100 47.097 310 160 2 21 326 22 331 3.67e-91 276
MS.gene03138.t1 MTR_2g084080 47.651 298 147 2 29 326 29 317 7.20e-91 275
MS.gene03138.t1 MTR_3g072190 46.026 302 154 2 25 326 26 318 3.22e-90 273
MS.gene03138.t1 MTR_5g074710 45.897 329 167 5 1 326 1 321 1.63e-89 271
MS.gene03138.t1 MTR_5g074740 47.541 305 149 5 25 326 25 321 5.82e-89 270
MS.gene03138.t1 MTR_5g049280 44.620 316 164 6 18 326 26 337 1.32e-88 270
MS.gene03138.t1 MTR_5g074860 48.039 306 148 5 23 325 27 324 1.70e-88 269
MS.gene03138.t1 MTR_4g029170 46.104 308 153 5 22 326 24 321 1.88e-87 266
MS.gene03138.t1 MTR_2g084090 45.902 305 155 3 23 326 23 318 2.67e-87 266
MS.gene03138.t1 MTR_2g084020 46.644 298 151 2 29 326 29 318 4.59e-87 265
MS.gene03138.t1 MTR_3g094670 47.022 319 157 4 6 322 10 318 1.72e-86 264
MS.gene03138.t1 MTR_4g029180 47.000 300 148 4 29 326 31 321 2.89e-86 263
MS.gene03138.t1 MTR_2g084010 46.053 304 156 2 23 326 23 318 3.80e-86 263
MS.gene03138.t1 MTR_4g133800 45.667 300 148 7 30 326 46 333 4.53e-86 263
MS.gene03138.t1 MTR_4g074995 46.580 307 141 4 23 326 22 308 4.18e-85 259
MS.gene03138.t1 MTR_1g115900 45.246 305 156 5 25 327 27 322 4.79e-85 260
MS.gene03138.t1 MTR_2g084000 45.066 304 159 3 23 326 24 319 1.75e-84 258
MS.gene03138.t1 MTR_3g094630 47.284 313 154 3 16 326 19 322 3.44e-84 258
MS.gene03138.t1 MTR_7g026990 44.371 302 152 5 29 327 35 323 3.24e-83 255
MS.gene03138.t1 MTR_4g030890 44.371 302 163 3 25 326 100 396 1.20e-82 257
MS.gene03138.t1 MTR_2g008710 45.033 302 155 5 29 326 31 325 4.12e-82 253
MS.gene03138.t1 MTR_2g088770 43.648 307 167 5 22 326 23 325 4.34e-82 253
MS.gene03138.t1 MTR_2g437770 44.408 304 157 6 25 327 50 342 2.25e-81 251
MS.gene03138.t1 MTR_4g031140 42.718 309 170 4 25 332 28 330 8.81e-81 250
MS.gene03138.t1 MTR_4g046713 40.979 327 189 3 1 326 3 326 3.60e-80 248
MS.gene03138.t1 MTR_6g043280 42.462 325 167 7 11 326 19 332 1.74e-79 246
MS.gene03138.t1 MTR_4g074990 43.974 307 146 4 23 326 22 305 2.94e-79 244
MS.gene03138.t1 MTR_7g107520 42.679 321 177 5 6 326 7 320 6.48e-79 244
MS.gene03138.t1 MTR_3g466180 43.709 302 161 2 25 326 31 323 1.17e-78 244
MS.gene03138.t1 MTR_3g467600 42.453 318 173 3 12 326 14 324 1.82e-78 243
MS.gene03138.t1 MTR_6g043240 44.194 310 157 7 25 332 42 337 3.96e-78 243
MS.gene03138.t1 MTR_1g086320 43.046 302 166 3 29 326 34 333 6.18e-78 242
MS.gene03138.t1 MTR_4g114210 42.718 309 161 6 25 326 21 320 7.08e-78 241
MS.gene03138.t1 MTR_1g038680 43.894 303 162 5 29 326 33 332 9.35e-78 241
MS.gene03138.t1 MTR_2g029880 59.716 211 73 3 137 345 9 209 4.37e-77 236
MS.gene03138.t1 MTR_5g022870 40.367 327 183 8 1 326 1 316 5.22e-77 239
MS.gene03138.t1 MTR_3g092990 40.566 318 186 2 10 326 11 326 2.67e-76 238
MS.gene03138.t1 MTR_1g086490 39.766 342 188 5 1 326 1 340 3.02e-76 238
MS.gene03138.t1 MTR_8g075100 42.574 303 164 7 25 326 26 319 3.23e-76 237
MS.gene03138.t1 MTR_1g025980 42.384 302 165 6 25 325 24 317 9.85e-76 236
MS.gene03138.t1 MTR_1g101830 40.728 302 173 4 25 326 27 322 2.64e-75 235
MS.gene03138.t1 MTR_1g077000 41.391 302 164 5 25 326 39 327 8.47e-75 234
MS.gene03138.t1 MTR_0155s0040 38.889 324 184 6 3 326 6 315 4.90e-73 229
MS.gene03138.t1 MTR_4g074980 42.434 304 143 5 23 326 23 294 1.18e-72 227
MS.gene03138.t1 MTR_4g087965 40.984 305 171 6 25 323 42 343 1.51e-72 229
MS.gene03138.t1 MTR_1g090760 39.739 307 180 4 23 326 26 330 1.49e-71 226
MS.gene03138.t1 MTR_7g029030 41.994 331 176 9 1 326 1 320 2.99e-71 224
MS.gene03138.t1 MTR_3g072190 44.015 259 136 2 68 326 2 251 4.82e-71 222
MS.gene03138.t1 MTR_7g086820 40.196 306 174 5 21 326 16 312 6.96e-71 223
MS.gene03138.t1 MTR_5g016010 38.066 331 196 5 1 325 1 328 1.33e-69 221
MS.gene03138.t1 MTR_4g074980 47.257 237 116 2 23 256 23 253 1.46e-69 218
MS.gene03138.t1 MTR_6g043460 41.158 311 170 6 25 333 36 335 1.06e-68 219
MS.gene03138.t1 MTR_4g132490 38.154 325 192 5 4 326 10 327 1.46e-68 218
MS.gene03138.t1 MTR_6g027440 40.123 324 183 7 4 326 1 314 1.29e-66 213
MS.gene03138.t1 MTR_4g127670 40.264 303 171 5 24 322 23 319 4.85e-66 211
MS.gene03138.t1 MTR_5g074860 40.196 306 133 4 23 325 27 285 5.76e-66 210
MS.gene03138.t1 MTR_4g095450 39.329 328 185 6 1 322 1 320 5.12e-65 209
MS.gene03138.t1 MTR_1g009750 40.717 307 172 7 25 326 27 328 8.98e-65 208
MS.gene03138.t1 MTR_2g008160 38.924 316 177 8 18 326 17 323 4.69e-64 206
MS.gene03138.t1 MTR_3g092990 38.365 318 182 3 10 326 11 315 6.23e-64 206
MS.gene03138.t1 MTR_8g062780 35.737 319 201 3 10 326 8 324 6.51e-63 203
MS.gene03138.t1 MTR_2g008730 45.306 245 126 4 86 326 61 301 1.92e-62 201
MS.gene03138.t1 MTR_2g078610 36.061 330 178 6 25 323 76 403 4.82e-61 201
MS.gene03138.t1 MTR_2g067440 35.650 331 179 7 25 325 60 386 5.96e-61 200
MS.gene03138.t1 MTR_2g099175 37.134 307 181 4 25 326 36 335 1.11e-60 198
MS.gene03138.t1 MTR_2g077990 36.858 331 174 7 25 323 76 403 1.48e-60 199
MS.gene03138.t1 MTR_5g033470 37.097 310 186 6 23 326 71 377 1.35e-59 196
MS.gene03138.t1 MTR_7g086870 36.842 304 180 5 23 326 20 311 1.92e-59 194
MS.gene03138.t1 MTR_3g105790 39.016 305 176 4 25 326 25 322 9.72e-59 192
MS.gene03138.t1 MTR_0286s0010 37.785 307 180 7 25 326 34 334 6.50e-58 191
MS.gene03138.t1 MTR_6g008075 37.785 307 180 7 25 326 34 334 6.50e-58 191
MS.gene03138.t1 MTR_0147s0010 35.202 321 172 4 25 325 77 381 1.06e-57 191
MS.gene03138.t1 MTR_2g078280 36.875 320 167 7 25 312 76 392 3.06e-56 188
MS.gene03138.t1 MTR_1g009750 37.785 307 164 8 25 326 27 311 2.25e-55 183
MS.gene03138.t1 MTR_2g067450 36.721 305 183 6 25 325 11 309 7.58e-55 182
MS.gene03138.t1 MTR_1g066710 33.762 311 195 4 21 328 23 325 1.25e-54 182
MS.gene03138.t1 MTR_1g066380 33.441 311 196 4 21 328 23 325 9.50e-52 174
MS.gene03138.t1 MTR_1g066680 34.084 311 193 5 21 328 23 324 6.81e-50 169
MS.gene03138.t1 MTR_1g066640 33.441 311 196 4 21 328 23 325 2.02e-49 168
MS.gene03138.t1 MTR_4g132110 33.223 301 190 4 29 326 36 328 2.13e-48 166
MS.gene03138.t1 MTR_2g008160 34.177 316 157 8 18 326 17 288 2.19e-48 164
MS.gene03138.t1 MTR_5g074700 42.241 232 109 6 98 326 5 214 5.49e-47 159
MS.gene03138.t1 MTR_4g132110 32.680 306 190 5 29 326 36 333 1.68e-46 161
MS.gene03138.t1 MTR_2g008160 43.860 171 92 3 20 190 19 185 7.05e-44 150
MS.gene03138.t1 MTR_1g066380 34.221 263 162 4 69 328 3 257 5.43e-43 149
MS.gene03138.t1 MTR_7g072490 39.200 250 89 4 71 320 2 188 5.94e-43 148
MS.gene03138.t1 MTR_3g105790 39.916 238 137 3 92 326 12 246 2.16e-42 147
MS.gene03138.t1 MTR_3g072210 43.750 192 99 4 136 326 55 238 6.34e-41 144
MS.gene03138.t1 MTR_3g072260 47.934 121 63 0 21 141 22 142 3.98e-34 122
MS.gene03138.t1 MTR_2g078560 32.301 226 120 4 131 325 96 319 2.46e-30 118
MS.gene03138.t1 MTR_5g058120 38.650 163 87 3 160 322 6 155 3.19e-26 105
MS.gene03138.t1 MTR_2g077980 28.364 275 155 8 87 323 11 281 1.05e-24 102
MS.gene03138.t1 MTR_2g029930 55.000 100 17 3 23 108 17 102 1.15e-24 96.7
MS.gene03138.t1 MTR_1g089005 40.310 129 70 2 15 137 5 132 1.10e-22 93.2
MS.gene03138.t1 MTR_7g086790 30.851 188 108 4 72 259 17 182 3.98e-20 87.4
MS.gene03138.t1 MTR_1g098320 46.591 88 45 1 245 332 45 130 1.93e-18 81.3
MS.gene03138.t1 MTR_3g462850 37.241 145 80 6 189 326 9 149 2.66e-18 80.9
MS.gene03138.t1 MTR_4g114220 48.101 79 31 2 51 129 29 97 1.22e-17 79.0
MS.gene03138.t1 MTR_6g048160 53.521 71 29 2 64 134 22 88 1.27e-17 77.4
MS.gene03138.t1 MTR_3g088160 28.643 199 114 7 118 310 180 356 4.26e-15 75.9
MS.gene03138.t1 MTR_3g088160 28.643 199 114 7 118 310 180 356 6.84e-15 75.9
MS.gene03138.t1 MTR_4g031040 30.286 175 78 3 84 258 1 131 1.29e-14 70.5
MS.gene03138.t1 MTR_5g074770 40.860 93 54 1 233 325 17 108 2.96e-14 68.6
MS.gene03138.t1 MTR_4g012865 45.588 68 37 0 25 92 77 144 7.62e-13 65.9
MS.gene03138.t1 MTR_7g086810 30.081 123 60 1 21 143 2 98 2.10e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03138.t1 AT5G06720 57.632 321 136 0 7 327 14 334 9.36e-131 377
MS.gene03138.t1 AT5G06730 58.521 311 129 0 25 335 33 343 1.74e-128 372
MS.gene03138.t1 AT2G38390 57.096 303 129 1 25 326 31 333 4.29e-123 358
MS.gene03138.t1 AT2G38380 56.106 303 132 1 25 326 31 333 8.25e-122 355
MS.gene03138.t1 AT4G08770 54.341 311 140 2 22 330 21 331 7.28e-121 352
MS.gene03138.t1 AT4G08780 54.019 311 141 2 22 330 21 331 6.38e-120 350
MS.gene03138.t1 AT3G32980 57.329 307 129 2 25 329 31 337 1.18e-119 349
MS.gene03138.t1 AT3G49120 57.003 307 130 2 25 329 32 338 1.60e-119 349
MS.gene03138.t1 AT3G49110 53.988 326 145 3 6 329 17 339 1.15e-116 342
MS.gene03138.t1 AT2G18150 50.489 307 151 1 20 326 31 336 5.11e-108 319
MS.gene03138.t1 AT2G18140 51.325 302 146 1 25 326 35 335 2.79e-107 317
MS.gene03138.t1 AT5G66390 48.701 308 157 1 19 326 27 333 7.20e-107 316
MS.gene03138.t1 AT4G36430 49.342 304 153 1 23 326 28 330 5.05e-106 314
MS.gene03138.t1 AT1G44970 51.475 305 148 0 22 326 42 346 6.31e-105 311
MS.gene03138.t1 AT5G19880 52.443 307 143 2 23 326 23 329 1.68e-104 310
MS.gene03138.t1 AT5G19890 49.689 322 150 5 7 326 16 327 5.74e-104 308
MS.gene03138.t1 AT1G49570 50.485 309 148 3 19 324 42 348 1.94e-103 308
MS.gene03138.t1 AT3G50990 48.675 302 154 1 25 326 41 341 5.43e-101 301
MS.gene03138.t1 AT1G14550 48.515 303 148 3 25 326 26 321 2.74e-94 283
MS.gene03138.t1 AT5G05340 47.697 304 148 4 25 326 30 324 1.56e-92 279
MS.gene03138.t1 AT2G35380 50.327 306 148 3 25 326 30 335 1.54e-91 277
MS.gene03138.t1 AT1G14540 45.706 326 166 3 1 326 1 315 5.28e-91 275
MS.gene03138.t1 AT5G58400 44.923 325 167 4 5 326 10 325 3.77e-88 268
MS.gene03138.t1 AT5G58390 47.541 305 148 4 25 326 21 316 1.17e-87 266
MS.gene03138.t1 AT1G68850 45.603 307 161 5 25 326 30 335 3.25e-87 266
MS.gene03138.t1 AT4G16270 45.151 299 159 4 29 326 54 348 5.12e-86 263
MS.gene03138.t1 AT3G03670 41.509 318 177 4 12 326 10 321 6.21e-82 252
MS.gene03138.t1 AT2G22420 42.715 302 168 3 25 326 23 319 1.22e-80 249
MS.gene03138.t1 AT2G41480 44.660 309 155 7 25 326 29 328 5.14e-80 247
MS.gene03138.t1 AT5G15180 41.967 305 167 5 25 326 32 329 6.80e-80 247
MS.gene03138.t1 AT4G11290 41.846 325 181 4 8 326 4 326 4.03e-79 245
MS.gene03138.t1 AT1G71695 43.408 311 163 6 21 329 43 342 1.14e-78 245
MS.gene03138.t1 AT5G64120 44.631 298 157 5 29 326 39 328 2.76e-78 243
MS.gene03138.t1 AT3G01190 40.798 326 185 6 2 326 3 321 5.12e-78 242
MS.gene03138.t1 AT5G51890 40.328 305 171 6 25 326 26 322 5.07e-76 237
MS.gene03138.t1 AT1G05260 39.818 329 188 6 4 326 1 325 1.92e-75 236
MS.gene03138.t1 AT5G17820 39.871 311 175 5 16 326 15 313 4.49e-75 234
MS.gene03138.t1 AT2G18980 41.121 321 178 5 10 326 10 323 5.11e-75 234
MS.gene03138.t1 AT1G05240 40.789 304 166 5 29 326 30 325 2.41e-74 233
MS.gene03138.t1 AT1G05250 40.789 304 166 5 29 326 30 325 2.41e-74 233
MS.gene03138.t1 AT5G42180 40.312 320 182 6 7 325 5 316 2.79e-74 232
MS.gene03138.t1 AT5G17820 39.871 311 175 5 16 326 68 366 1.86e-73 232
MS.gene03138.t1 AT4G25980 40.717 307 171 5 25 326 26 326 2.27e-73 230
MS.gene03138.t1 AT5G39580 44.371 302 153 7 29 326 29 319 6.45e-73 229
MS.gene03138.t1 AT4G37530 42.345 307 172 3 23 326 25 329 6.78e-73 229
MS.gene03138.t1 AT3G21770 40.777 309 177 5 17 323 21 325 2.58e-72 228
MS.gene03138.t1 AT1G30870 40.260 308 171 6 25 329 51 348 7.64e-71 224
MS.gene03138.t1 AT4G33420 40.379 317 170 6 16 326 22 325 1.54e-70 223
MS.gene03138.t1 AT4G33420 40.379 317 170 6 16 326 69 372 8.47e-70 223
MS.gene03138.t1 AT4G30170 39.935 308 174 5 23 326 25 325 2.63e-69 220
MS.gene03138.t1 AT5G64110 43.377 302 158 7 29 326 38 330 2.73e-69 220
MS.gene03138.t1 AT4G33870 36.418 335 175 5 24 323 67 398 4.22e-69 222
MS.gene03138.t1 AT5G67400 39.818 329 189 6 3 326 5 329 4.40e-69 219
MS.gene03138.t1 AT2G35380 49.393 247 121 3 84 326 1 247 8.65e-69 216
MS.gene03138.t1 AT3G49960 38.462 325 193 4 6 326 8 329 1.47e-68 218
MS.gene03138.t1 AT5G64100 40.532 301 166 6 29 326 41 331 1.49e-68 218
MS.gene03138.t1 AT2G34060 40.656 305 172 6 25 323 42 343 9.49e-67 214
MS.gene03138.t1 AT2G39040 40.836 311 173 7 23 326 44 350 3.15e-66 213
MS.gene03138.t1 AT4G37520 39.088 307 182 3 23 326 25 329 5.54e-66 211
MS.gene03138.t1 AT5G14130 39.355 310 173 7 23 326 30 330 6.70e-66 211
MS.gene03138.t1 AT5G14130 39.610 308 171 7 25 326 73 371 1.72e-65 211
MS.gene03138.t1 AT3G28200 38.158 304 178 4 25 326 21 316 4.24e-65 209
MS.gene03138.t1 AT4G37520 38.762 307 180 4 23 326 25 326 1.06e-64 208
MS.gene03138.t1 AT1G77100 40.575 313 168 8 21 326 18 319 3.53e-64 206
MS.gene03138.t1 AT5G40150 38.188 309 182 4 20 326 27 328 1.47e-63 205
MS.gene03138.t1 AT4G37530 43.529 255 141 2 23 274 25 279 2.03e-63 203
MS.gene03138.t1 AT5G24070 38.614 303 173 6 31 328 43 337 2.91e-63 204
MS.gene03138.t1 AT4G26010 37.037 324 188 6 4 326 1 309 5.02e-62 201
MS.gene03138.t1 AT4G26010 37.037 324 188 6 4 326 29 337 8.26e-62 201
MS.gene03138.t1 AT1G24110 36.066 305 188 5 25 326 22 322 1.10e-61 200
MS.gene03138.t1 AT4G17690 37.049 305 181 5 25 326 26 322 6.13e-61 198
MS.gene03138.t1 AT5G22410 36.760 321 189 8 7 322 10 321 1.87e-60 197
MS.gene03138.t1 AT5G47000 33.951 324 204 5 6 326 14 330 2.57e-60 197
MS.gene03138.t1 AT2G24800 40.196 306 172 5 25 326 31 329 3.30e-60 196
MS.gene03138.t1 AT4G31760 38.636 308 173 6 25 326 29 326 1.61e-59 194
MS.gene03138.t1 AT2G43480 39.643 280 156 6 52 326 64 335 1.25e-58 192
MS.gene03138.t1 AT1G34510 34.568 324 196 6 4 326 1 309 1.51e-55 184
MS.gene03138.t1 AT3G17070 35.952 331 192 9 8 326 17 339 1.08e-53 180
MS.gene03138.t1 AT4G21960 32.036 334 211 6 2 328 5 329 5.34e-49 167
MS.gene03138.t1 AT2G37130 32.803 314 199 5 17 326 22 327 2.09e-47 163
MS.gene03138.t1 AT4G25980 45.882 170 88 3 25 194 71 236 4.13e-46 159
MS.gene03138.t1 AT2G37130 32.781 302 191 5 29 326 3 296 3.12e-45 157
MS.gene03138.t1 AT3G17070 34.752 282 167 9 53 326 4 276 3.04e-39 140
MS.gene03138.t1 AT5G39580 41.748 206 105 5 29 227 29 226 2.39e-38 137
MS.gene03138.t1 AT2G24800 43.931 173 87 3 25 194 31 196 1.58e-33 124
MS.gene03138.t1 AT1G77490 26.766 269 147 11 59 310 106 341 5.01e-17 82.0
MS.gene03138.t1 AT1G77490 26.766 269 147 11 59 310 106 341 8.25e-17 81.3
MS.gene03138.t1 AT4G08390 25.830 271 147 11 59 310 126 361 1.49e-14 74.3
MS.gene03138.t1 AT4G08390 25.830 271 147 11 59 310 127 362 1.65e-14 74.3
MS.gene03138.t1 AT4G08390 25.830 271 147 11 59 310 127 362 1.65e-14 74.3
MS.gene03138.t1 AT4G08390 25.830 271 147 11 59 310 127 362 1.65e-14 74.3
MS.gene03138.t1 AT4G32320 26.523 279 149 10 36 309 96 323 2.33e-13 70.5

Find 85 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAACACAAACTCATTA+AGG 0.176019 2.1:-61413414 MS.gene03138:CDS
TGCTGAAGTATCTTCTATTT+TGG 0.206832 2.1:-61413305 MS.gene03138:intron
GGTTGTTTCCTGTTGAGTTT+TGG 0.220863 2.1:+61411895 None:intergenic
AGGAAACAACCTAGCCAATT+TGG 0.278951 2.1:-61411883 MS.gene03138:CDS
TAGTGTGTCGATGATTAAAA+TGG 0.281981 2.1:-61411697 MS.gene03138:CDS
CCCCTTAATGAGTTTGTGTT+TGG 0.292974 2.1:+61413412 None:intergenic
GATGAGACTGGCACCGATTC+GGG 0.301159 2.1:+61414136 None:intergenic
CTGGTGATGAAGGGGAAATT+AGG 0.315180 2.1:-61411656 MS.gene03138:CDS
CACAAACTCATTAAGGGGTT+TGG 0.326710 2.1:-61413407 MS.gene03138:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.1:+61414179 None:intergenic
AATTCTGAAAGAAGAGAGTT+TGG 0.333317 2.1:+61411721 None:intergenic
TACTTAGGTGCTCATACATT+TGG 0.341082 2.1:-61412029 MS.gene03138:intron
AAAGCTTCATTTCTTGTTCA+AGG 0.342588 2.1:-61412330 MS.gene03138:CDS
TCCCTTCTTCCCAATGGAAT+TGG 0.355749 2.1:+61412423 None:intergenic
GGTTCCATGCGTGTTGTACT+AGG 0.361248 2.1:-61414290 MS.gene03138:CDS
ATGATTAAAATGGCGAATAT+TGG 0.365590 2.1:-61411687 MS.gene03138:CDS
TTTGTAAATGGTAACTCCTC+TGG 0.366528 2.1:-61411621 MS.gene03138:CDS
TCCAAACACAAACTCATTAA+GGG 0.400250 2.1:-61413413 MS.gene03138:CDS
TATTTGTTATCAAAGTGATT+AGG 0.408604 2.1:+61411849 None:intergenic
GCGAATATTGGAGTGTTAAC+TGG 0.413231 2.1:-61411675 MS.gene03138:CDS
TGATGAGACTGGCACCGATT+CGG 0.427794 2.1:+61414135 None:intergenic
AGGTGTGGTAAGGTCCAAAT+TGG 0.430992 2.1:+61411869 None:intergenic
CTTGCAAATCAAAACCTTCC+CGG 0.432751 2.1:-61412378 MS.gene03138:CDS
ATGGCAATGGTATCTGCATT+AGG 0.433475 2.1:+61411765 None:intergenic
TCCCTCATGGCCAATTCCAT+TGG 0.444960 2.1:-61412433 MS.gene03138:CDS
GTTGTGTTTAGTGTTGGATC+AGG 0.445757 2.1:+61411948 None:intergenic
ATATGTCCCCAAAACTCAAC+AGG 0.446009 2.1:-61411903 MS.gene03138:CDS
CCCTCATGGCCAATTCCATT+GGG 0.446682 2.1:-61412432 MS.gene03138:CDS
ATATGACTCTAAACACAATA+GGG 0.454551 2.1:+61414180 None:intergenic
TCCCTCACTGATCCCCGAAT+CGG 0.454674 2.1:-61414149 MS.gene03138:CDS
GAATCGGTGCCAGTCTCATC+AGG 0.463560 2.1:-61414133 MS.gene03138:CDS
TCCAATCTTCAAAACCTCAA+TGG 0.466595 2.1:-61411822 MS.gene03138:CDS
GGCCAATTCCATTGGGAAGA+AGG 0.467383 2.1:-61412425 MS.gene03138:CDS
TCAGCACAAGAAACAGTGTT+AGG 0.474603 2.1:+61413343 None:intergenic
TTTGTGATGCATGGAGGGTA+TGG 0.479593 2.1:-61414248 MS.gene03138:CDS
CACTTCGAAGTAAGCCATTG+AGG 0.486340 2.1:+61411808 None:intergenic
CTATACAATTTCAGTGGCAC+TGG 0.489654 2.1:-61411975 MS.gene03138:CDS
TCCCGGACCCTTCTCTACAT+TGG 0.499367 2.1:-61412361 MS.gene03138:CDS
TGGTGTGCATTTGTGATGCA+TGG 0.501927 2.1:-61414257 MS.gene03138:CDS
ATCCAATGTAGAGAAGGGTC+CGG 0.504853 2.1:+61412359 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.1:-61412297 MS.gene03138:intron
GGAGTGTTAACTGGTGATGA+AGG 0.514476 2.1:-61411666 MS.gene03138:CDS
AACACAATAGGGTATAGATC+TGG 0.518782 2.1:+61414191 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.1:-61414174 MS.gene03138:CDS
ATTTGCAAGAGTTATGTTTG+CGG 0.522007 2.1:+61412392 None:intergenic
TCCAATGTAGAGAAGGGTCC+GGG 0.526068 2.1:+61412360 None:intergenic
GCCAATTCCATTGGGAAGAA+GGG 0.526946 2.1:-61412424 MS.gene03138:CDS
CCCAATGGAATTGGCCATGA+GGG 0.531181 2.1:+61412432 None:intergenic
AGAAGATACTTCAGCAGCAA+TGG 0.536212 2.1:+61413312 None:intergenic
AAGTAAGTTGTGTTTAGTGT+TGG 0.540670 2.1:+61411942 None:intergenic
CAAAGTGATTAGGTGTGGTA+AGG 0.543295 2.1:+61411859 None:intergenic
TGATGCATGGAGGGTATGGT+TGG 0.543555 2.1:-61414244 MS.gene03138:CDS
CATGCGTGTTGTACTAGGGT+TGG 0.550754 2.1:-61414285 MS.gene03138:CDS
AAGCTATCCCTTCTTCCCAA+TGG 0.554508 2.1:+61412417 None:intergenic
TTGTACTAGGGTTGGCACTT+TGG 0.555400 2.1:-61414277 MS.gene03138:CDS
AAGTTGATCCAATGTAGAGA+AGG 0.557740 2.1:+61412353 None:intergenic
CATGTTTCACTGTAGAATGA+TGG 0.560211 2.1:+61414215 None:intergenic
TTGATCTATGAACAGGGAGG+AGG 0.566092 2.1:-61412456 MS.gene03138:intron
CCAAACACAAACTCATTAAG+GGG 0.568266 2.1:-61413412 MS.gene03138:CDS
AAAGCTATTAACAATGGCAA+TGG 0.569604 2.1:+61411752 None:intergenic
GCTCGTGGTGGATCAAAAGA+TGG 0.571292 2.1:-61411594 MS.gene03138:CDS
TGTTTGTGACAGGGCTGCGA+TGG 0.571388 2.1:-61413487 MS.gene03138:intron
GTTATCAAAGTGATTAGGTG+TGG 0.571420 2.1:+61411854 None:intergenic
ACCGATTCGGGGATCAGTGA+GGG 0.574096 2.1:+61414148 None:intergenic
AGTTGATCCAATGTAGAGAA+GGG 0.578999 2.1:+61412354 None:intergenic
TCTGCTAAAGCTATTAACAA+TGG 0.580549 2.1:+61411746 None:intergenic
GTGCATTTGTGATGCATGGA+GGG 0.581824 2.1:-61414253 MS.gene03138:CDS
TGCCACTGAAATTGTATAGA+CGG 0.584385 2.1:+61411979 None:intergenic
TCCTCTGGATTAGCTCGTGG+TGG 0.586455 2.1:-61411606 MS.gene03138:CDS
GTTCCATGCGTGTTGTACTA+GGG 0.589091 2.1:-61414289 MS.gene03138:CDS
AAAATGAAGCCTGATGAGAC+TGG 0.590570 2.1:+61414124 None:intergenic
TGGTAAGGTCCAAATTGGCT+AGG 0.596004 2.1:+61411874 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.1:-61412446 MS.gene03138:intron
AACTCCTCTGGATTAGCTCG+TGG 0.601383 2.1:-61411609 MS.gene03138:CDS
GAGTGTTAACTGGTGATGAA+GGG 0.609584 2.1:-61411665 MS.gene03138:CDS
ATGAGACTGGCACCGATTCG+GGG 0.630611 2.1:+61414137 None:intergenic
AACCGTCTATACAATTTCAG+TGG 0.634780 2.1:-61411981 MS.gene03138:CDS
CAACCCTAGTACAACACGCA+TGG 0.644628 2.1:+61414286 None:intergenic
TGTGCATTTGTGATGCATGG+AGG 0.652684 2.1:-61414254 MS.gene03138:CDS
ATGTAGAGAAGGGTCCGGGA+AGG 0.656157 2.1:+61412364 None:intergenic
AGTGTTAACTGGTGATGAAG+GGG 0.656296 2.1:-61411664 MS.gene03138:CDS
CACCGATTCGGGGATCAGTG+AGG 0.657501 2.1:+61414147 None:intergenic
TCCCAATGGAATTGGCCATG+AGG 0.657766 2.1:+61412431 None:intergenic
AATGGTATCTGCATTAGGAG+TGG 0.670287 2.1:+61411770 None:intergenic
TCCACCACGAGCTAATCCAG+AGG 0.739992 2.1:+61411605 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAGAAATTATTTATA+TGG + chr2.1:61411820-61411839 None:intergenic 10.0%
!! ATTTAAATAAAAAACTAACA+TGG - chr2.1:61412298-61412317 MS.gene03138:CDS 10.0%
!!! CATAGAAAATAAATTATTTT+AGG + chr2.1:61413292-61413311 None:intergenic 10.0%
!!! TAAATAATAGTTTTTTCTAA+TGG + chr2.1:61413073-61413092 None:intergenic 10.0%
!!! TAATGTTTTGTTTTTATATT+AGG - chr2.1:61412651-61412670 MS.gene03138:intron 10.0%
!! AAAAATGAATGTTCTTATAT+TGG - chr2.1:61412077-61412096 MS.gene03138:intron 15.0%
!! AAAATATACTATAAGTACAA+GGG - chr2.1:61412337-61412356 MS.gene03138:CDS 15.0%
!! AAAATGAATGTTCTTATATT+GGG - chr2.1:61412078-61412097 MS.gene03138:intron 15.0%
!! CCTAAGTATAAAAAAAAATT+AGG + chr2.1:61413827-61413846 None:intergenic 15.0%
!!! AAATTATTTTAGGTATTGAT+AGG + chr2.1:61413282-61413301 None:intergenic 15.0%
!!! ATAATTTTATCCATATAACT+AGG + chr2.1:61412621-61412640 None:intergenic 15.0%
!!! ATGACAAGATTTTAATTATT+GGG - chr2.1:61412236-61412255 MS.gene03138:intron 15.0%
!!! ATTGGAATTTATTTTATGAA+TGG + chr2.1:61412788-61412807 None:intergenic 15.0%
!!! CCTAATTTTTTTTTATACTT+AGG - chr2.1:61413824-61413843 MS.gene03138:intron 15.0%
!!! TAAATCTTTATTTTGTTTGT+AGG + chr2.1:61412150-61412169 None:intergenic 15.0%
!! CAAAATATACTATAAGTACA+AGG - chr2.1:61412336-61412355 MS.gene03138:CDS 20.0%
!!! GATGACAAGATTTTAATTAT+TGG - chr2.1:61412235-61412254 MS.gene03138:intron 20.0%
!!! TATTCCTTTTCTTTTTCTTT+TGG + chr2.1:61413228-61413247 None:intergenic 20.0%
!!! TATTTGTTATCAAAGTGATT+AGG + chr2.1:61414022-61414041 None:intergenic 20.0%
!!! TTGCAATGTAATTTTGTAAA+TGG - chr2.1:61414235-61414254 MS.gene03138:CDS 20.0%
!!! TTTTCTTCTTCTTTTTTTAG+AGG - chr2.1:61412052-61412071 MS.gene03138:intron 20.0%
!!! TTTTTAGTGGTATTCAATAA+CGG - chr2.1:61412111-61412130 MS.gene03138:intron 20.0%
!!! TTTTTCATTACCTAGTTATA+TGG - chr2.1:61412608-61412627 MS.gene03138:intron 20.0%
! AAGTGAAAGAGATAAAAGAA+GGG + chr2.1:61412933-61412952 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2.1:61411692-61411711 None:intergenic 25.0%
! ACTTACCAATACATTCTAAA+AGG - chr2.1:61412754-61412773 MS.gene03138:intron 25.0%
! ATAAAACATTTGTCTTGGAA+GGG + chr2.1:61412910-61412929 None:intergenic 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.1:61411691-61411710 None:intergenic 25.0%
! ATCATAGCTCAAACTTTATA+TGG - chr2.1:61413336-61413355 MS.gene03138:CDS 25.0%
! ATGATTAAAATGGCGAATAT+TGG - chr2.1:61414181-61414200 MS.gene03138:CDS 25.0%
! ATGTATATTGATCTATGAAC+AGG - chr2.1:61413405-61413424 MS.gene03138:CDS 25.0%
! ATTTCTAACTTTCTTACACT+AGG - chr2.1:61411828-61411847 MS.gene03138:CDS 25.0%
! CATAGATCAATATACATTAG+AGG + chr2.1:61413402-61413421 None:intergenic 25.0%
! GTAACCAAAAGAAAAAGAAA+AGG - chr2.1:61413221-61413240 MS.gene03138:intron 25.0%
! TCAAAAAAGTAAGTTTGCAT+TGG + chr2.1:61412806-61412825 None:intergenic 25.0%
! TCAATTTCAAAGAAAGAAGT+AGG + chr2.1:61411869-61411888 None:intergenic 25.0%
! TCTCATGATTTCTTTCTATT+TGG - chr2.1:61413018-61413037 MS.gene03138:intron 25.0%
! TCTTTGCCTAAAATGATTAT+AGG - chr2.1:61411958-61411977 MS.gene03138:CDS 25.0%
! TGTATATTGATCTATGAACA+GGG - chr2.1:61413406-61413425 MS.gene03138:CDS 25.0%
!! ATCGAACCTATAATCATTTT+AGG + chr2.1:61411967-61411986 None:intergenic 25.0%
!! ATGGTGTATTGAGATTATTT+TGG + chr2.1:61412733-61412752 None:intergenic 25.0%
!! CTTCTTTTACTATACTGATA+TGG - chr2.1:61411911-61411930 MS.gene03138:CDS 25.0%
!! GAACGCTATAATGTTAATTT+TGG - chr2.1:61411887-61411906 MS.gene03138:CDS 25.0%
!! TAATTCAATAAGTTGACGTT+GGG + chr2.1:61412215-61412234 None:intergenic 25.0%
!!! ATAGAATGACTATTTTTGTG+AGG + chr2.1:61413692-61413711 None:intergenic 25.0%
!!! GTGATTTTTGACTTGAAAAA+TGG - chr2.1:61413798-61413817 MS.gene03138:intron 25.0%
!!! TAGAATGACTATTTTTGTGA+GGG + chr2.1:61413691-61413710 None:intergenic 25.0%
!!! TTATTTTGTTTGTAGGTCAT+TGG + chr2.1:61412143-61412162 None:intergenic 25.0%
!!! TTTTAATGAAGCTTTGTAGT+TGG + chr2.1:61413632-61413651 None:intergenic 25.0%
AAAGCTATTAACAATGGCAA+TGG + chr2.1:61414119-61414138 None:intergenic 30.0%
AAAGCTTCATTTCTTGTTCA+AGG - chr2.1:61413538-61413557 MS.gene03138:intron 30.0%
AAGGGATAAAACATTTGTCT+TGG + chr2.1:61412915-61412934 None:intergenic 30.0%
AAGTAAGTTGTGTTTAGTGT+TGG + chr2.1:61413929-61413948 None:intergenic 30.0%
ATTTGCAAGAGTTATGTTTG+CGG + chr2.1:61413479-61413498 None:intergenic 30.0%
GAAGTGAAAGAGATAAAAGA+AGG + chr2.1:61412934-61412953 None:intergenic 30.0%
GATAAAACATTTGTCTTGGA+AGG + chr2.1:61412911-61412930 None:intergenic 30.0%
TCCAAACACAAACTCATTAA+GGG - chr2.1:61412455-61412474 MS.gene03138:intron 30.0%
TCTGCTAAAGCTATTAACAA+TGG + chr2.1:61414125-61414144 None:intergenic 30.0%
TTCCAAACACAAACTCATTA+AGG - chr2.1:61412454-61412473 MS.gene03138:intron 30.0%
! AATTCTGAAAGAAGAGAGTT+TGG + chr2.1:61414150-61414169 None:intergenic 30.0%
! ACCAATACATTCTAAAAGGT+TGG - chr2.1:61412758-61412777 MS.gene03138:intron 30.0%
! CTAATTCAATAAGTTGACGT+TGG + chr2.1:61412216-61412235 None:intergenic 30.0%
! TACATTAGAGGACTTTAAGA+TGG + chr2.1:61413390-61413409 None:intergenic 30.0%
! TAGAATGTATTGGTAAGTGA+TGG + chr2.1:61412752-61412771 None:intergenic 30.0%
! TAGTGTGTCGATGATTAAAA+TGG - chr2.1:61414171-61414190 MS.gene03138:CDS 30.0%
! TATCACGGTTGTTGTAATTT+TGG - chr2.1:61413741-61413760 MS.gene03138:intron 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.1:61411694-61411713 MS.gene03138:CDS 30.0%
! TTTAAGATGGACATTTGAGA+AGG + chr2.1:61413377-61413396 None:intergenic 30.0%
! TTTTGATCCCTCAATTATCA+CGG - chr2.1:61413726-61413745 MS.gene03138:intron 30.0%
!! TGCTGAAGTATCTTCTATTT+TGG - chr2.1:61412563-61412582 MS.gene03138:intron 30.0%
!! TTTTGGTGGATAGAGTATTT+TGG + chr2.1:61412716-61412735 None:intergenic 30.0%
!!! GTGTATTGAGATTATTTTGG+TGG + chr2.1:61412730-61412749 None:intergenic 30.0%
AAATCATGAGACCACAAAAC+CGG + chr2.1:61413009-61413028 None:intergenic 35.0%
AACACAATAGGGTATAGATC+TGG + chr2.1:61411680-61411699 None:intergenic 35.0%
AACCGTCTATACAATTTCAG+TGG - chr2.1:61413887-61413906 MS.gene03138:intron 35.0%
ACAACAACCGTGATAATTGA+GGG + chr2.1:61413736-61413755 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.1:61413571-61413590 MS.gene03138:intron 35.0%
AGTTGATCCAATGTAGAGAA+GGG + chr2.1:61413517-61413536 None:intergenic 35.0%
ATATTGATCTATGAACAGGG+AGG - chr2.1:61413409-61413428 MS.gene03138:CDS 35.0%
CATGTTTCACTGTAGAATGA+TGG + chr2.1:61411656-61411675 None:intergenic 35.0%
CCAAACACAAACTCATTAAG+GGG - chr2.1:61412456-61412475 MS.gene03138:intron 35.0%
CTTCTCAAATAGACGAATTG+AGG + chr2.1:61411995-61412014 None:intergenic 35.0%
GAAGTAGGTTGTAATTGCAA+AGG + chr2.1:61411854-61411873 None:intergenic 35.0%
GAATGCTAGCGTAAAAAACA+TGG + chr2.1:61413777-61413796 None:intergenic 35.0%
GTTATCAAAGTGATTAGGTG+TGG + chr2.1:61414017-61414036 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.1:61412372-61412391 MS.gene03138:CDS 35.0%
TACAACAACCGTGATAATTG+AGG + chr2.1:61413737-61413756 None:intergenic 35.0%
TACTTAGGTGCTCATACATT+TGG - chr2.1:61413839-61413858 MS.gene03138:intron 35.0%
TCCAATCTTCAAAACCTCAA+TGG - chr2.1:61414046-61414065 MS.gene03138:intron 35.0%
TGCCACTGAAATTGTATAGA+CGG + chr2.1:61413892-61413911 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.1:61412371-61412390 MS.gene03138:CDS 35.0%
TTTGTAAATGGTAACTCCTC+TGG - chr2.1:61414247-61414266 MS.gene03138:CDS 35.0%
! AAGTTGATCCAATGTAGAGA+AGG + chr2.1:61413518-61413537 None:intergenic 35.0%
! TTGTTTCCTGTTGAGTTTTG+GGG + chr2.1:61413974-61413993 None:intergenic 35.0%
!! GGGCTCATAAAGATTTTTAG+TGG - chr2.1:61412098-61412117 MS.gene03138:intron 35.0%
!! GGTTGTTGTAATTTTGGTCT+CGG - chr2.1:61413747-61413766 MS.gene03138:intron 35.0%
!! GTTGTTTCCTGTTGAGTTTT+GGG + chr2.1:61413975-61413994 None:intergenic 35.0%
!!! GCCAACCTTTTAGAATGTAT+TGG + chr2.1:61412762-61412781 None:intergenic 35.0%
AAAATGAAGCCTGATGAGAC+TGG + chr2.1:61411747-61411766 None:intergenic 40.0%
AATGGTATCTGCATTAGGAG+TGG + chr2.1:61414101-61414120 None:intergenic 40.0%
AGAAGATACTTCAGCAGCAA+TGG + chr2.1:61412559-61412578 None:intergenic 40.0%
AGGAAACAACCTAGCCAATT+TGG - chr2.1:61413985-61414004 MS.gene03138:intron 40.0%
ATATGTCCCCAAAACTCAAC+AGG - chr2.1:61413965-61413984 MS.gene03138:intron 40.0%
ATGGCAATGGTATCTGCATT+AGG + chr2.1:61414106-61414125 None:intergenic 40.0%
CAAAGTGATTAGGTGTGGTA+AGG + chr2.1:61414012-61414031 None:intergenic 40.0%
CACAAACTCATTAAGGGGTT+TGG - chr2.1:61412461-61412480 MS.gene03138:intron 40.0%
CCCCTTAATGAGTTTGTGTT+TGG + chr2.1:61412459-61412478 None:intergenic 40.0%
CTATACAATTTCAGTGGCAC+TGG - chr2.1:61413893-61413912 MS.gene03138:intron 40.0%
CTTGCAAATCAAAACCTTCC+CGG - chr2.1:61413490-61413509 MS.gene03138:intron 40.0%
TCAGCACAAGAAACAGTGTT+AGG + chr2.1:61412528-61412547 None:intergenic 40.0%
! AGTGTTAACTGGTGATGAAG+GGG - chr2.1:61414204-61414223 MS.gene03138:CDS 40.0%
! GAGTGTTAACTGGTGATGAA+GGG - chr2.1:61414203-61414222 MS.gene03138:CDS 40.0%
! GCGAATATTGGAGTGTTAAC+TGG - chr2.1:61414193-61414212 MS.gene03138:CDS 40.0%
! GTTGTGTTTAGTGTTGGATC+AGG + chr2.1:61413923-61413942 None:intergenic 40.0%
!! CTTGTTGTTGAGTTGACAGA+AGG + chr2.1:61412986-61413005 None:intergenic 40.0%
!! GGTTGTTTCCTGTTGAGTTT+TGG + chr2.1:61413976-61413995 None:intergenic 40.0%
!! TGTTGTAATTTTGGTCTCGG+TGG - chr2.1:61413750-61413769 MS.gene03138:intron 40.0%
!!! GCCATTGAGGTTTTGAAGAT+TGG + chr2.1:61414050-61414069 None:intergenic 40.0%
AAGCTATCCCTTCTTCCCAA+TGG + chr2.1:61413454-61413473 None:intergenic 45.0%
AGGTGTGGTAAGGTCCAAAT+TGG + chr2.1:61414002-61414021 None:intergenic 45.0%
ATCCAATGTAGAGAAGGGTC+CGG + chr2.1:61413512-61413531 None:intergenic 45.0%
CACTTCGAAGTAAGCCATTG+AGG + chr2.1:61414063-61414082 None:intergenic 45.0%
CTGTCAACTCAACAACAAGC+CGG - chr2.1:61412987-61413006 MS.gene03138:intron 45.0%
GCCAATTCCATTGGGAAGAA+GGG - chr2.1:61413444-61413463 MS.gene03138:CDS 45.0%
GTGCATTTGTGATGCATGGA+GGG - chr2.1:61411615-61411634 MS.gene03138:CDS 45.0%
GTTCCATGCGTGTTGTACTA+GGG - chr2.1:61411579-61411598 MS.gene03138:CDS 45.0%
TCCCTTCTTCCCAATGGAAT+TGG + chr2.1:61413448-61413467 None:intergenic 45.0%
TGGTAAGGTCCAAATTGGCT+AGG + chr2.1:61413997-61414016 None:intergenic 45.0%
TGGTGTGCATTTGTGATGCA+TGG - chr2.1:61411611-61411630 MS.gene03138:CDS 45.0%
TGTGCATTTGTGATGCATGG+AGG - chr2.1:61411614-61411633 MS.gene03138:CDS 45.0%
TTGATCTATGAACAGGGAGG+AGG - chr2.1:61413412-61413431 MS.gene03138:CDS 45.0%
TTTGTGATGCATGGAGGGTA+TGG - chr2.1:61411620-61411639 MS.gene03138:CDS 45.0%
! CTGGTGATGAAGGGGAAATT+AGG - chr2.1:61414212-61414231 MS.gene03138:CDS 45.0%
! GGAGTGTTAACTGGTGATGA+AGG - chr2.1:61414202-61414221 MS.gene03138:CDS 45.0%
! TTGTACTAGGGTTGGCACTT+TGG - chr2.1:61411591-61411610 MS.gene03138:CDS 45.0%
!! GAGTTGACAGAAGGTGTTGT+GGG + chr2.1:61412977-61412996 None:intergenic 45.0%
!! TCAACAACAAGCCGGTTTTG+TGG - chr2.1:61412995-61413014 MS.gene03138:intron 45.0%
!! TGAGTTGACAGAAGGTGTTG+TGG + chr2.1:61412978-61412997 None:intergenic 45.0%
!! AAAAACTTATAAAATAAATA+AGG - chr2.1:61412859-61412878 MS.gene03138:intron 5.0%
CAACCCTAGTACAACACGCA+TGG + chr2.1:61411585-61411604 None:intergenic 50.0%
CATGCGTGTTGTACTAGGGT+TGG - chr2.1:61411583-61411602 MS.gene03138:CDS 50.0%
CCCAATGGAATTGGCCATGA+GGG + chr2.1:61413439-61413458 None:intergenic 50.0%
CCCTCATGGCCAATTCCATT+GGG - chr2.1:61413436-61413455 MS.gene03138:CDS 50.0%
GGCATCTTGCGGAGGAAATT+GGG + chr2.1:61412889-61412908 None:intergenic 50.0%
GGCCAATTCCATTGGGAAGA+AGG - chr2.1:61413443-61413462 MS.gene03138:CDS 50.0%
GGTTCCATGCGTGTTGTACT+AGG - chr2.1:61411578-61411597 MS.gene03138:CDS 50.0%
TCCAATGTAGAGAAGGGTCC+GGG + chr2.1:61413511-61413530 None:intergenic 50.0%
TCCCAATGGAATTGGCCATG+AGG + chr2.1:61413440-61413459 None:intergenic 50.0%
TCCCTCATGGCCAATTCCAT+TGG - chr2.1:61413435-61413454 MS.gene03138:CDS 50.0%
! TGATGCATGGAGGGTATGGT+TGG - chr2.1:61411624-61411643 MS.gene03138:CDS 50.0%
!! AACTCCTCTGGATTAGCTCG+TGG - chr2.1:61414259-61414278 MS.gene03138:CDS 50.0%
!! GCTCGTGGTGGATCAAAAGA+TGG - chr2.1:61414274-61414293 MS.gene03138:CDS 50.0%
!! TGATGAGACTGGCACCGATT+CGG + chr2.1:61411736-61411755 None:intergenic 50.0%
!! TGTCTTGGAAGGGCATCTTG+CGG + chr2.1:61412900-61412919 None:intergenic 50.0%
ATGTAGAGAAGGGTCCGGGA+AGG + chr2.1:61413507-61413526 None:intergenic 55.0%
GGGCATCTTGCGGAGGAAAT+TGG + chr2.1:61412890-61412909 None:intergenic 55.0%
TCCACCACGAGCTAATCCAG+AGG + chr2.1:61414266-61414285 None:intergenic 55.0%
TCCCGGACCCTTCTCTACAT+TGG - chr2.1:61413507-61413526 MS.gene03138:intron 55.0%
TCCCTCACTGATCCCCGAAT+CGG - chr2.1:61411719-61411738 MS.gene03138:CDS 55.0%
TGTTTGTGACAGGGCTGCGA+TGG - chr2.1:61412381-61412400 MS.gene03138:CDS 55.0%
!! ACCGATTCGGGGATCAGTGA+GGG + chr2.1:61411723-61411742 None:intergenic 55.0%
!! ATGAGACTGGCACCGATTCG+GGG + chr2.1:61411734-61411753 None:intergenic 55.0%
!! GAATCGGTGCCAGTCTCATC+AGG - chr2.1:61411735-61411754 MS.gene03138:CDS 55.0%
!! GATGAGACTGGCACCGATTC+GGG + chr2.1:61411735-61411754 None:intergenic 55.0%
!! TCCTCTGGATTAGCTCGTGG+TGG - chr2.1:61414262-61414281 MS.gene03138:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.1:61413422-61413441 MS.gene03138:CDS 60.0%
!! CACCGATTCGGGGATCAGTG+AGG + chr2.1:61411724-61411743 None:intergenic 60.0%
!! CTTGGAAGGGCATCTTGCGG+AGG + chr2.1:61412897-61412916 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 61411575 61414315 61411575 ID=MS.gene03138
chr2.1 mRNA 61411575 61414315 61411575 ID=MS.gene03138.t1;Parent=MS.gene03138
chr2.1 exon 61414106 61414315 61414106 ID=MS.gene03138.t1.exon1;Parent=MS.gene03138.t1
chr2.1 CDS 61414106 61414315 61414106 ID=cds.MS.gene03138.t1;Parent=MS.gene03138.t1
chr2.1 exon 61413306 61413497 61413306 ID=MS.gene03138.t1.exon2;Parent=MS.gene03138.t1
chr2.1 CDS 61413306 61413497 61413306 ID=cds.MS.gene03138.t1;Parent=MS.gene03138.t1
chr2.1 exon 61412298 61412463 61412298 ID=MS.gene03138.t1.exon3;Parent=MS.gene03138.t1
chr2.1 CDS 61412298 61412463 61412298 ID=cds.MS.gene03138.t1;Parent=MS.gene03138.t1
chr2.1 exon 61411575 61412044 61411575 ID=MS.gene03138.t1.exon4;Parent=MS.gene03138.t1
chr2.1 CDS 61411575 61412044 61411575 ID=cds.MS.gene03138.t1;Parent=MS.gene03138.t1
Gene Sequence

>MS.gene03138

ATGGGTTCCATGCGTGTTGTACTAGGGTTGGCACTTTGGTGTGCATTTGTGATGCATGGAGGGTATGGTTGGCTCAGTCCATCATTCTACAGTGAAACATGTCCAGATCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATCGGTGCCAGTCTCATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGTATGTTATTATCTATAGATTGTTATGTTCATCCATATAAATAATTTCTAACTTTCTTACACTAGGCCTTTGCAATTACAACCTACTTCTTTCTTTGAAATTGAACGCTATAATGTTAATTTTGGACTTCTTTTACTATACTGATATGGTGTTGAAAAGTTTAGTAACAAAGTTCTTTGCCTAAAATGATTATAGGTTCGATCGATTCCTCAATTCGTCTATTTGAGAAGAAGTTTGATCATGTGTGTAGATTAAAAATGAACGTTCTTTTCTTCTTCTTTTTTTAGAGGAAAAAAATGAATGTTCTTATATTGGGCTCATAAAGATTTTTAGTGGTATTCAATAACGGAATATACCAATGACCTACAAACAAAATAAAGATTTAAATATGATTTTAGTCAATGCATTATAGTTTTTTTTTTTTAATCCCAACGTCAACTTATTGAATTAGATGACAAGATTTTAATTATTGGGTGAGTGACTAAGAACAATCTTAACAATTGAAAAGACAAAATTTAAATAAAAAACTAACATGGATTAAAAATTAAAATCAAAATATACTATAAGTACAAGGGCTTATGCATGTTGTTTATGCATGTTTGTGACAGGGCTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACACAAACTCATTAAGGGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAGAAGAATGTCCTAACACTGTTTCTTGTGCTGATATTCTTACCATTGCTGCTGAAGTATCTTCTATTTTGGTATGTTTTTAATTTCATCAACTTTTTTCATTACCTAGTTATATGGATAAAATTATTTTAAAATTTTAATGTTTTGTTTTTATATTAGGAGCTTTGTTTTTTTAACATCAAACAAAATTTTATATTCACCAAAATACTCTATCCACCAAAATAATCTCAATACACCATCACTTACCAATACATTCTAAAAGGTTGGCATACCATTCATAAAATAAATTCCAATGCAAACTTACTTTTTTGAATTTATTAACATATGCAAATTTGCACATGATAAAAAAACTTATAAAATAAATAAGGATATCCCAATTTCCTCCGCAAGATGCCCTTCCAAGACAAATGTTTTATCCCTTCTTTTATCTCTTTCACTTCTGCATGTTTTGTACAAATTGCCCACAACACCTTCTGTCAACTCAACAACAAGCCGGTTTTGTGGTCTCATGATTTCTTTCTATTTGGTTGAGTTGTACTCTTTTAATATTCATTTGCCATTAGAAAAAACTATTATTTACATATGAATTTTTTTAATTAAATATAGTGAATTTTTTATTGTGATTAATAATTTTGAGCAATTATCTCTCAAACTTTTTTTGAGCAATTATCTCTCAAACTTTTTTTGAGCAATAAGAAATAGTTTTTGTAACCAAAAGAAAAAGAAAAGGAATAGTTTCACTAAGTAATTTATTTATTTTCTATGCCTATCAATACCTAAAATAATTTATTTTCTATGATTTTAATTATATATATAATTAAAATCATAGCTCAAACTTTATATGGTCACTTATAACTTTTCCTTCTCAAATGTCCATCTTAAAGTCCTCTAATGTATATTGATCTATGAACAGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGGGATAGCTTAACCGCAAACATAACTCTTGCAAATCAAAACCTTCCCGGACCCTTCTCTACATTGGATCAACTTAAAGCTTCATTTCTTGTTCAAGGTCTCAACACTACAGATTTAGTTACACTCTCAGGTATAATATTACACATAATCATCAATTTAATATTTACCAACTACAAAGCTTCATTAAAAATAGATTTATGCACTTTTAATTCTCATATTTTATTACCCTCACAAAAATAGTCATTCTATTTTAAAATAAAATTTTTTGATCCCTCAATTATCACGGTTGTTGTAATTTTGGTCTCGGTGGTCCATGTTTTTTACGCTAGCATTCTGTGATTTTTGACTTGAAAAATGGTGACCTAATTTTTTTTTATACTTAGGTGCTCATACATTTGGAAGAGCTCGTTGCAGTACATTCATCAACCGTCTATACAATTTCAGTGGCACTGGAAATCCTGATCCAACACTAAACACAACTTACTTACAAACATTGCGTCTGATATGTCCCCAAAACTCAACAGGAAACAACCTAGCCAATTTGGACCTTACCACACCTAATCACTTTGATAACAAATATTACTCCAATCTTCAAAACCTCAATGGCTTACTTCGAAGTGATCAAGTGCTATTCTCCACTCCTAATGCAGATACCATTGCCATTGTTAATAGCTTTAGCAGAAACCAAACTCTCTTCTTTCAGAATTTTAGTGTGTCGATGATTAAAATGGCGAATATTGGAGTGTTAACTGGTGATGAAGGGGAAATTAGGTTGCAATGTAATTTTGTAAATGGTAACTCCTCTGGATTAGCTCGTGGTGGATCAAAAGATGGCTTGTTAAGCTCATTCTAA
Protein sequence

>MS.gene03138.t1

MGSMRVVLGLALWCAFVMHGGYGWLSPSFYSETCPDLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNTNSLRGLDVVNQIKTAVEEECPNTVSCADILTIAAEVSSILGGGPSWPIPLGRRDSLTANITLANQNLPGPFSTLDQLKASFLVQGLNTTDLVTLSGAHTFGRARCSTFINRLYNFSGTGNPDPTLNTTYLQTLRLICPQNSTGNNLANLDLTTPNHFDNKYYSNLQNLNGLLRSDQVLFSTPNADTIAIVNSFSRNQTLFFQNFSVSMIKMANIGVLTGDEGEIRLQCNFVNGNSSGLARGGSKDGLLSSF