Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74597.t1 | XP_003594466.2 | 94.1 | 355 | 21 | 0 | 1 | 355 | 1 | 355 | 8.20E-187 | 662.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74597.t1 | Q9LEH3 | 57.6 | 321 | 135 | 1 | 11 | 330 | 7 | 327 | 1.5e-96 | 354.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74597.t1 | G7IJR4 | 94.1 | 355 | 21 | 0 | 1 | 355 | 1 | 355 | 5.9e-187 | 662.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74597.t1 | MTR_2g028980 | 94.085 | 355 | 21 | 0 | 1 | 355 | 1 | 355 | 0.0 | 684 |
MS.gene74597.t1 | MTR_2g029740 | 76.901 | 355 | 82 | 0 | 1 | 355 | 1 | 355 | 0.0 | 570 |
MS.gene74597.t1 | MTR_2g029750 | 75.775 | 355 | 85 | 1 | 1 | 355 | 1 | 354 | 0.0 | 551 |
MS.gene74597.t1 | MTR_2g029815 | 74.366 | 355 | 88 | 1 | 1 | 355 | 1 | 352 | 0.0 | 539 |
MS.gene74597.t1 | MTR_2g029820 | 72.394 | 355 | 98 | 0 | 1 | 355 | 1 | 355 | 0.0 | 534 |
MS.gene74597.t1 | MTR_2g029800 | 71.268 | 355 | 100 | 1 | 1 | 355 | 1 | 353 | 0.0 | 524 |
MS.gene74597.t1 | MTR_2g029830 | 70.028 | 357 | 102 | 2 | 1 | 355 | 1 | 354 | 1.11e-180 | 504 |
MS.gene74597.t1 | MTR_2g029850 | 66.384 | 354 | 116 | 1 | 1 | 354 | 1 | 351 | 2.23e-168 | 473 |
MS.gene74597.t1 | MTR_2g029860 | 66.197 | 355 | 116 | 3 | 1 | 354 | 1 | 352 | 1.97e-165 | 466 |
MS.gene74597.t1 | MTR_2g029910 | 61.756 | 353 | 130 | 2 | 3 | 354 | 4 | 352 | 1.73e-154 | 438 |
MS.gene74597.t1 | MTR_2g029830 | 74.468 | 282 | 72 | 0 | 74 | 355 | 5 | 286 | 1.52e-153 | 433 |
MS.gene74597.t1 | MTR_2g029560 | 65.015 | 323 | 113 | 0 | 14 | 336 | 9 | 331 | 3.95e-153 | 434 |
MS.gene74597.t1 | MTR_2g029730 | 62.315 | 337 | 121 | 2 | 1 | 336 | 1 | 332 | 5.93e-147 | 419 |
MS.gene74597.t1 | MTR_1g054205 | 54.294 | 326 | 148 | 1 | 6 | 330 | 1 | 326 | 3.20e-123 | 358 |
MS.gene74597.t1 | MTR_7g093370 | 57.053 | 319 | 132 | 2 | 17 | 330 | 53 | 371 | 9.72e-123 | 358 |
MS.gene74597.t1 | MTR_4g125940 | 50.755 | 331 | 157 | 3 | 2 | 330 | 3 | 329 | 7.12e-105 | 311 |
MS.gene74597.t1 | MTR_5g021060 | 50.993 | 302 | 147 | 1 | 29 | 330 | 30 | 330 | 7.69e-105 | 311 |
MS.gene74597.t1 | MTR_2g040000 | 51.961 | 306 | 142 | 2 | 28 | 330 | 28 | 331 | 7.97e-104 | 308 |
MS.gene74597.t1 | MTR_8g076820 | 50.662 | 302 | 148 | 1 | 29 | 330 | 30 | 330 | 3.86e-103 | 307 |
MS.gene74597.t1 | MTR_2g084080 | 46.250 | 320 | 163 | 2 | 11 | 330 | 7 | 317 | 5.62e-97 | 291 |
MS.gene74597.t1 | MTR_5g017850 | 48.525 | 305 | 153 | 3 | 27 | 330 | 25 | 326 | 7.77e-97 | 291 |
MS.gene74597.t1 | MTR_5g017860 | 48.525 | 305 | 153 | 3 | 27 | 330 | 25 | 326 | 2.25e-96 | 289 |
MS.gene74597.t1 | MTR_3g072190 | 48.125 | 320 | 157 | 2 | 11 | 330 | 8 | 318 | 2.66e-96 | 289 |
MS.gene74597.t1 | MTR_5g074970 | 47.866 | 328 | 158 | 4 | 7 | 330 | 8 | 326 | 2.54e-95 | 286 |
MS.gene74597.t1 | MTR_3g094650 | 49.074 | 324 | 150 | 5 | 5 | 326 | 8 | 318 | 4.43e-95 | 286 |
MS.gene74597.t1 | MTR_4g029170 | 48.348 | 333 | 157 | 6 | 1 | 330 | 1 | 321 | 7.63e-95 | 285 |
MS.gene74597.t1 | MTR_3g466200 | 48.457 | 324 | 154 | 6 | 10 | 330 | 7 | 320 | 1.34e-94 | 285 |
MS.gene74597.t1 | MTR_2g084110 | 46.273 | 322 | 164 | 3 | 9 | 330 | 5 | 317 | 2.10e-94 | 284 |
MS.gene74597.t1 | MTR_4g125940 | 53.818 | 275 | 123 | 2 | 58 | 330 | 2 | 274 | 2.49e-94 | 282 |
MS.gene74597.t1 | MTR_4g029200 | 46.032 | 315 | 161 | 2 | 16 | 330 | 33 | 338 | 9.28e-94 | 283 |
MS.gene74597.t1 | MTR_4g083710 | 45.921 | 331 | 165 | 5 | 3 | 330 | 5 | 324 | 1.30e-93 | 282 |
MS.gene74597.t1 | MTR_5g074740 | 47.812 | 320 | 156 | 5 | 15 | 331 | 11 | 322 | 1.84e-93 | 282 |
MS.gene74597.t1 | MTR_5g074760 | 47.664 | 321 | 157 | 5 | 14 | 331 | 10 | 322 | 6.34e-93 | 280 |
MS.gene74597.t1 | MTR_1g022970 | 48.675 | 302 | 155 | 0 | 29 | 330 | 46 | 347 | 6.85e-93 | 281 |
MS.gene74597.t1 | MTR_7g072510 | 45.246 | 305 | 158 | 2 | 26 | 330 | 17 | 312 | 1.99e-92 | 279 |
MS.gene74597.t1 | MTR_2g084090 | 45.201 | 323 | 167 | 3 | 9 | 330 | 5 | 318 | 2.24e-91 | 276 |
MS.gene74597.t1 | MTR_5g083860 | 45.593 | 329 | 168 | 4 | 4 | 330 | 6 | 325 | 5.91e-91 | 275 |
MS.gene74597.t1 | MTR_2g084020 | 46.178 | 314 | 161 | 2 | 17 | 330 | 13 | 318 | 1.16e-90 | 275 |
MS.gene74597.t1 | MTR_4g029180 | 49.333 | 300 | 141 | 4 | 33 | 330 | 31 | 321 | 2.07e-90 | 274 |
MS.gene74597.t1 | MTR_4g074995 | 44.713 | 331 | 156 | 5 | 3 | 330 | 2 | 308 | 2.35e-90 | 273 |
MS.gene74597.t1 | MTR_2g084010 | 45.860 | 314 | 162 | 2 | 17 | 330 | 13 | 318 | 2.11e-89 | 271 |
MS.gene74597.t1 | MTR_5g074710 | 46.562 | 320 | 160 | 5 | 15 | 331 | 11 | 322 | 3.66e-89 | 271 |
MS.gene74597.t1 | MTR_3g094670 | 47.866 | 328 | 156 | 5 | 1 | 326 | 4 | 318 | 4.17e-89 | 271 |
MS.gene74597.t1 | MTR_5g074860 | 45.181 | 332 | 166 | 5 | 6 | 329 | 1 | 324 | 7.31e-89 | 270 |
MS.gene74597.t1 | MTR_4g029190 | 43.266 | 349 | 170 | 5 | 1 | 330 | 1 | 340 | 8.18e-89 | 271 |
MS.gene74597.t1 | MTR_3g467600 | 45.312 | 320 | 165 | 3 | 14 | 330 | 12 | 324 | 2.29e-88 | 269 |
MS.gene74597.t1 | MTR_2g084000 | 45.714 | 315 | 162 | 3 | 17 | 330 | 13 | 319 | 4.60e-88 | 268 |
MS.gene74597.t1 | MTR_7g072480 | 47.213 | 305 | 150 | 4 | 27 | 330 | 22 | 316 | 7.11e-88 | 267 |
MS.gene74597.t1 | MTR_2g088770 | 44.025 | 318 | 172 | 5 | 15 | 330 | 12 | 325 | 5.96e-87 | 265 |
MS.gene74597.t1 | MTR_1g115900 | 43.125 | 320 | 171 | 4 | 13 | 330 | 11 | 321 | 1.10e-86 | 265 |
MS.gene74597.t1 | MTR_4g031140 | 42.628 | 312 | 174 | 3 | 25 | 336 | 24 | 330 | 3.97e-86 | 264 |
MS.gene74597.t1 | MTR_3g094630 | 46.988 | 332 | 161 | 5 | 1 | 330 | 4 | 322 | 1.86e-85 | 261 |
MS.gene74597.t1 | MTR_4g030890 | 43.689 | 309 | 169 | 3 | 24 | 332 | 95 | 398 | 7.12e-85 | 263 |
MS.gene74597.t1 | MTR_4g046713 | 42.991 | 321 | 175 | 4 | 11 | 330 | 13 | 326 | 9.62e-85 | 259 |
MS.gene74597.t1 | MTR_4g122640 | 44.371 | 302 | 165 | 2 | 29 | 330 | 38 | 336 | 1.54e-84 | 259 |
MS.gene74597.t1 | MTR_4g114210 | 43.925 | 321 | 167 | 6 | 15 | 330 | 8 | 320 | 2.11e-84 | 259 |
MS.gene74597.t1 | MTR_4g074990 | 43.505 | 331 | 157 | 5 | 3 | 330 | 2 | 305 | 2.58e-84 | 258 |
MS.gene74597.t1 | MTR_3g466180 | 45.130 | 308 | 160 | 2 | 23 | 330 | 25 | 323 | 1.42e-83 | 256 |
MS.gene74597.t1 | MTR_3g092990 | 42.767 | 318 | 179 | 2 | 14 | 330 | 11 | 326 | 4.16e-83 | 256 |
MS.gene74597.t1 | MTR_2g008710 | 44.040 | 302 | 158 | 5 | 33 | 330 | 31 | 325 | 2.21e-82 | 254 |
MS.gene74597.t1 | MTR_5g049280 | 42.154 | 325 | 179 | 6 | 14 | 330 | 14 | 337 | 2.99e-82 | 254 |
MS.gene74597.t1 | MTR_7g107520 | 42.812 | 320 | 177 | 4 | 11 | 330 | 7 | 320 | 3.91e-82 | 253 |
MS.gene74597.t1 | MTR_7g086820 | 43.137 | 306 | 165 | 5 | 27 | 332 | 18 | 314 | 1.74e-81 | 251 |
MS.gene74597.t1 | MTR_5g014100 | 45.215 | 303 | 162 | 3 | 32 | 330 | 29 | 331 | 1.82e-81 | 251 |
MS.gene74597.t1 | MTR_2g029880 | 57.870 | 216 | 77 | 3 | 139 | 354 | 7 | 208 | 3.47e-80 | 244 |
MS.gene74597.t1 | MTR_4g074980 | 42.073 | 328 | 155 | 5 | 3 | 330 | 2 | 294 | 7.00e-80 | 246 |
MS.gene74597.t1 | MTR_2g437770 | 44.333 | 300 | 155 | 7 | 32 | 330 | 53 | 341 | 5.80e-79 | 245 |
MS.gene74597.t1 | MTR_3g072190 | 49.035 | 259 | 123 | 2 | 72 | 330 | 2 | 251 | 1.65e-78 | 241 |
MS.gene74597.t1 | MTR_4g133800 | 42.475 | 299 | 161 | 5 | 34 | 331 | 46 | 334 | 2.68e-78 | 243 |
MS.gene74597.t1 | MTR_5g022870 | 41.509 | 318 | 174 | 8 | 14 | 330 | 10 | 316 | 1.06e-77 | 241 |
MS.gene74597.t1 | MTR_7g026990 | 41.611 | 298 | 164 | 3 | 33 | 330 | 35 | 322 | 5.80e-77 | 239 |
MS.gene74597.t1 | MTR_1g101830 | 41.830 | 306 | 172 | 4 | 25 | 330 | 23 | 322 | 9.35e-77 | 239 |
MS.gene74597.t1 | MTR_1g086320 | 41.317 | 334 | 188 | 4 | 1 | 330 | 4 | 333 | 3.56e-76 | 238 |
MS.gene74597.t1 | MTR_6g043280 | 42.945 | 326 | 161 | 9 | 20 | 332 | 21 | 334 | 1.31e-74 | 234 |
MS.gene74597.t1 | MTR_1g009750 | 42.903 | 310 | 163 | 7 | 28 | 330 | 26 | 328 | 2.00e-74 | 233 |
MS.gene74597.t1 | MTR_7g029030 | 40.419 | 334 | 181 | 6 | 1 | 330 | 1 | 320 | 5.10e-74 | 232 |
MS.gene74597.t1 | MTR_1g086490 | 40.469 | 341 | 188 | 4 | 1 | 330 | 4 | 340 | 5.60e-74 | 233 |
MS.gene74597.t1 | MTR_8g075100 | 40.584 | 308 | 173 | 7 | 24 | 330 | 21 | 319 | 9.36e-74 | 231 |
MS.gene74597.t1 | MTR_1g038680 | 42.434 | 304 | 165 | 6 | 33 | 330 | 33 | 332 | 1.37e-73 | 231 |
MS.gene74597.t1 | MTR_5g016010 | 40.120 | 334 | 189 | 6 | 1 | 329 | 1 | 328 | 3.81e-73 | 230 |
MS.gene74597.t1 | MTR_6g027440 | 41.325 | 317 | 177 | 6 | 14 | 330 | 7 | 314 | 6.06e-73 | 229 |
MS.gene74597.t1 | MTR_4g074980 | 44.828 | 261 | 132 | 4 | 3 | 260 | 2 | 253 | 1.38e-72 | 226 |
MS.gene74597.t1 | MTR_4g095450 | 42.154 | 325 | 167 | 7 | 7 | 326 | 12 | 320 | 1.33e-71 | 226 |
MS.gene74597.t1 | MTR_3g092990 | 40.881 | 318 | 174 | 3 | 14 | 330 | 11 | 315 | 1.36e-71 | 226 |
MS.gene74597.t1 | MTR_1g025980 | 39.692 | 325 | 186 | 7 | 7 | 329 | 1 | 317 | 5.06e-71 | 224 |
MS.gene74597.t1 | MTR_1g077000 | 38.323 | 334 | 189 | 7 | 1 | 330 | 7 | 327 | 5.93e-71 | 224 |
MS.gene74597.t1 | MTR_0155s0040 | 37.615 | 327 | 181 | 7 | 6 | 330 | 10 | 315 | 4.65e-70 | 222 |
MS.gene74597.t1 | MTR_2g008160 | 39.490 | 314 | 174 | 7 | 24 | 330 | 19 | 323 | 7.24e-70 | 221 |
MS.gene74597.t1 | MTR_6g043240 | 41.538 | 325 | 168 | 8 | 29 | 351 | 42 | 346 | 8.88e-69 | 219 |
MS.gene74597.t1 | MTR_4g127670 | 43.092 | 304 | 161 | 6 | 28 | 326 | 23 | 319 | 2.15e-68 | 218 |
MS.gene74597.t1 | MTR_5g074860 | 38.855 | 332 | 148 | 5 | 6 | 329 | 1 | 285 | 6.15e-67 | 213 |
MS.gene74597.t1 | MTR_6g043460 | 42.444 | 311 | 164 | 8 | 29 | 336 | 36 | 334 | 8.32e-67 | 214 |
MS.gene74597.t1 | MTR_7g086870 | 39.474 | 304 | 172 | 5 | 27 | 330 | 20 | 311 | 6.27e-66 | 211 |
MS.gene74597.t1 | MTR_4g087965 | 40.328 | 305 | 175 | 5 | 28 | 327 | 41 | 343 | 1.30e-65 | 211 |
MS.gene74597.t1 | MTR_4g132490 | 38.941 | 321 | 184 | 7 | 16 | 330 | 13 | 327 | 6.49e-65 | 209 |
MS.gene74597.t1 | MTR_1g090760 | 37.612 | 335 | 201 | 6 | 1 | 331 | 1 | 331 | 2.34e-64 | 207 |
MS.gene74597.t1 | MTR_1g009750 | 39.032 | 310 | 158 | 8 | 28 | 330 | 26 | 311 | 8.11e-63 | 203 |
MS.gene74597.t1 | MTR_2g099175 | 36.859 | 312 | 179 | 6 | 28 | 331 | 35 | 336 | 1.70e-62 | 203 |
MS.gene74597.t1 | MTR_2g008730 | 38.080 | 323 | 162 | 7 | 14 | 330 | 11 | 301 | 2.95e-62 | 201 |
MS.gene74597.t1 | MTR_8g062780 | 36.391 | 327 | 203 | 4 | 6 | 330 | 1 | 324 | 3.64e-61 | 199 |
MS.gene74597.t1 | MTR_2g067440 | 34.435 | 363 | 197 | 8 | 3 | 329 | 29 | 386 | 1.85e-60 | 199 |
MS.gene74597.t1 | MTR_3g105790 | 38.782 | 312 | 177 | 5 | 24 | 330 | 20 | 322 | 2.07e-60 | 197 |
MS.gene74597.t1 | MTR_5g033470 | 37.097 | 310 | 186 | 6 | 27 | 330 | 71 | 377 | 4.78e-58 | 192 |
MS.gene74597.t1 | MTR_1g066710 | 37.459 | 307 | 181 | 4 | 27 | 330 | 25 | 323 | 9.10e-58 | 190 |
MS.gene74597.t1 | MTR_2g077990 | 34.375 | 352 | 190 | 7 | 14 | 327 | 55 | 403 | 2.06e-57 | 192 |
MS.gene74597.t1 | MTR_2g078610 | 33.807 | 352 | 192 | 7 | 14 | 327 | 55 | 403 | 1.53e-56 | 189 |
MS.gene74597.t1 | MTR_1g066380 | 37.134 | 307 | 182 | 4 | 27 | 330 | 25 | 323 | 6.14e-56 | 186 |
MS.gene74597.t1 | MTR_2g067450 | 37.377 | 305 | 185 | 5 | 27 | 329 | 9 | 309 | 7.59e-56 | 185 |
MS.gene74597.t1 | MTR_4g132110 | 36.275 | 306 | 184 | 4 | 33 | 335 | 36 | 333 | 1.06e-54 | 182 |
MS.gene74597.t1 | MTR_1g066680 | 37.134 | 307 | 181 | 5 | 27 | 330 | 25 | 322 | 2.56e-54 | 181 |
MS.gene74597.t1 | MTR_2g008160 | 35.032 | 314 | 153 | 7 | 24 | 330 | 19 | 288 | 4.00e-54 | 180 |
MS.gene74597.t1 | MTR_0147s0010 | 33.642 | 324 | 179 | 4 | 26 | 329 | 74 | 381 | 5.16e-54 | 182 |
MS.gene74597.t1 | MTR_2g078280 | 34.604 | 341 | 182 | 7 | 14 | 316 | 55 | 392 | 1.15e-53 | 181 |
MS.gene74597.t1 | MTR_1g066640 | 37.134 | 307 | 182 | 4 | 27 | 330 | 25 | 323 | 1.19e-53 | 179 |
MS.gene74597.t1 | MTR_4g132110 | 36.334 | 311 | 182 | 6 | 33 | 335 | 36 | 338 | 2.24e-53 | 179 |
MS.gene74597.t1 | MTR_0286s0010 | 36.334 | 311 | 187 | 7 | 25 | 330 | 30 | 334 | 5.67e-53 | 178 |
MS.gene74597.t1 | MTR_6g008075 | 36.334 | 311 | 187 | 7 | 25 | 330 | 30 | 334 | 5.67e-53 | 178 |
MS.gene74597.t1 | MTR_5g074700 | 44.635 | 233 | 104 | 6 | 102 | 331 | 5 | 215 | 5.74e-51 | 169 |
MS.gene74597.t1 | MTR_3g072210 | 48.168 | 191 | 90 | 3 | 141 | 330 | 56 | 238 | 1.89e-49 | 166 |
MS.gene74597.t1 | MTR_1g066380 | 38.314 | 261 | 150 | 4 | 73 | 330 | 3 | 255 | 1.19e-45 | 157 |
MS.gene74597.t1 | MTR_2g008160 | 44.444 | 171 | 91 | 3 | 24 | 194 | 19 | 185 | 2.06e-44 | 152 |
MS.gene74597.t1 | MTR_3g105790 | 39.004 | 241 | 141 | 3 | 93 | 330 | 9 | 246 | 1.14e-43 | 151 |
MS.gene74597.t1 | MTR_7g072490 | 36.800 | 250 | 93 | 5 | 75 | 323 | 2 | 187 | 2.98e-36 | 130 |
MS.gene74597.t1 | MTR_3g072260 | 55.752 | 113 | 50 | 0 | 28 | 140 | 25 | 137 | 6.06e-34 | 122 |
MS.gene74597.t1 | MTR_2g029930 | 52.632 | 114 | 26 | 3 | 14 | 113 | 4 | 103 | 3.98e-28 | 106 |
MS.gene74597.t1 | MTR_2g078560 | 29.646 | 226 | 126 | 4 | 135 | 329 | 96 | 319 | 3.44e-27 | 109 |
MS.gene74597.t1 | MTR_5g058120 | 38.650 | 163 | 87 | 3 | 164 | 326 | 6 | 155 | 5.69e-26 | 104 |
MS.gene74597.t1 | MTR_2g077980 | 27.622 | 286 | 143 | 8 | 91 | 327 | 11 | 281 | 3.93e-23 | 97.8 |
MS.gene74597.t1 | MTR_7g086790 | 33.333 | 192 | 106 | 4 | 76 | 267 | 17 | 186 | 1.83e-21 | 91.3 |
MS.gene74597.t1 | MTR_1g089005 | 39.316 | 117 | 64 | 2 | 29 | 139 | 15 | 130 | 4.15e-20 | 86.3 |
MS.gene74597.t1 | MTR_3g462850 | 38.028 | 142 | 83 | 5 | 193 | 330 | 9 | 149 | 4.22e-19 | 83.2 |
MS.gene74597.t1 | MTR_1g098320 | 49.398 | 83 | 40 | 1 | 251 | 333 | 47 | 127 | 1.42e-17 | 79.0 |
MS.gene74597.t1 | MTR_4g114220 | 48.276 | 87 | 34 | 3 | 47 | 133 | 22 | 97 | 1.67e-16 | 75.9 |
MS.gene74597.t1 | MTR_6g048160 | 52.113 | 71 | 30 | 2 | 68 | 138 | 22 | 88 | 3.59e-16 | 73.6 |
MS.gene74597.t1 | MTR_4g031040 | 29.714 | 175 | 79 | 3 | 88 | 262 | 1 | 131 | 9.53e-15 | 70.9 |
MS.gene74597.t1 | MTR_5g074770 | 37.079 | 89 | 56 | 0 | 241 | 329 | 20 | 108 | 1.20e-13 | 67.0 |
MS.gene74597.t1 | MTR_4g012865 | 46.667 | 75 | 40 | 0 | 26 | 100 | 74 | 148 | 1.95e-13 | 67.8 |
MS.gene74597.t1 | MTR_7g107500 | 41.463 | 82 | 45 | 2 | 249 | 330 | 19 | 97 | 3.31e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74597.t1 | AT5G06720 | 54.890 | 317 | 143 | 0 | 14 | 330 | 17 | 333 | 3.49e-122 | 355 |
MS.gene74597.t1 | AT2G38380 | 55.663 | 309 | 136 | 1 | 25 | 332 | 27 | 335 | 5.13e-122 | 355 |
MS.gene74597.t1 | AT4G08770 | 55.380 | 316 | 139 | 2 | 25 | 338 | 20 | 335 | 8.16e-121 | 352 |
MS.gene74597.t1 | AT5G06730 | 52.778 | 324 | 153 | 0 | 14 | 337 | 18 | 341 | 7.28e-120 | 350 |
MS.gene74597.t1 | AT2G38390 | 54.693 | 309 | 139 | 1 | 25 | 332 | 27 | 335 | 1.91e-119 | 349 |
MS.gene74597.t1 | AT3G32980 | 53.754 | 333 | 145 | 3 | 25 | 355 | 27 | 352 | 4.52e-119 | 348 |
MS.gene74597.t1 | AT3G49120 | 52.161 | 347 | 154 | 4 | 14 | 355 | 14 | 353 | 3.22e-118 | 346 |
MS.gene74597.t1 | AT4G08780 | 53.797 | 316 | 144 | 2 | 25 | 338 | 20 | 335 | 1.57e-117 | 344 |
MS.gene74597.t1 | AT3G49110 | 53.153 | 333 | 147 | 3 | 25 | 355 | 29 | 354 | 1.67e-117 | 344 |
MS.gene74597.t1 | AT5G66390 | 47.006 | 334 | 166 | 2 | 7 | 330 | 1 | 333 | 4.09e-103 | 307 |
MS.gene74597.t1 | AT5G19890 | 52.614 | 306 | 137 | 4 | 27 | 330 | 28 | 327 | 2.78e-101 | 302 |
MS.gene74597.t1 | AT4G36430 | 48.208 | 307 | 158 | 1 | 24 | 330 | 25 | 330 | 6.71e-101 | 301 |
MS.gene74597.t1 | AT5G19880 | 47.022 | 319 | 163 | 3 | 15 | 330 | 14 | 329 | 6.03e-100 | 299 |
MS.gene74597.t1 | AT1G14550 | 50.654 | 306 | 143 | 3 | 26 | 330 | 23 | 321 | 2.95e-99 | 296 |
MS.gene74597.t1 | AT2G18150 | 48.355 | 304 | 156 | 1 | 27 | 330 | 34 | 336 | 5.90e-99 | 296 |
MS.gene74597.t1 | AT2G18140 | 49.333 | 300 | 151 | 1 | 31 | 330 | 37 | 335 | 8.09e-99 | 296 |
MS.gene74597.t1 | AT1G44970 | 49.351 | 308 | 154 | 1 | 23 | 330 | 41 | 346 | 1.35e-94 | 286 |
MS.gene74597.t1 | AT5G05340 | 49.346 | 306 | 144 | 4 | 27 | 330 | 28 | 324 | 1.50e-94 | 285 |
MS.gene74597.t1 | AT3G50990 | 47.078 | 308 | 162 | 1 | 24 | 331 | 36 | 342 | 5.31e-93 | 281 |
MS.gene74597.t1 | AT1G14540 | 47.040 | 321 | 153 | 3 | 10 | 330 | 12 | 315 | 9.42e-92 | 277 |
MS.gene74597.t1 | AT4G16270 | 47.855 | 303 | 153 | 4 | 29 | 330 | 50 | 348 | 3.66e-90 | 274 |
MS.gene74597.t1 | AT1G49570 | 45.574 | 305 | 161 | 3 | 27 | 328 | 46 | 348 | 4.82e-89 | 271 |
MS.gene74597.t1 | AT5G64120 | 44.578 | 332 | 164 | 7 | 10 | 330 | 6 | 328 | 8.57e-88 | 268 |
MS.gene74597.t1 | AT5G58390 | 47.152 | 316 | 155 | 5 | 14 | 326 | 6 | 312 | 1.64e-87 | 266 |
MS.gene74597.t1 | AT1G68850 | 44.224 | 303 | 163 | 6 | 33 | 330 | 34 | 335 | 9.10e-85 | 260 |
MS.gene74597.t1 | AT3G03670 | 44.079 | 304 | 167 | 2 | 27 | 330 | 21 | 321 | 1.40e-84 | 259 |
MS.gene74597.t1 | AT1G71695 | 45.603 | 307 | 157 | 5 | 29 | 333 | 44 | 342 | 1.89e-84 | 260 |
MS.gene74597.t1 | AT2G41480 | 42.813 | 327 | 172 | 6 | 12 | 330 | 9 | 328 | 4.35e-83 | 256 |
MS.gene74597.t1 | AT5G17820 | 42.271 | 317 | 170 | 6 | 14 | 330 | 10 | 313 | 4.69e-83 | 255 |
MS.gene74597.t1 | AT3G21770 | 44.118 | 306 | 165 | 5 | 24 | 327 | 24 | 325 | 2.68e-82 | 253 |
MS.gene74597.t1 | AT5G58400 | 45.110 | 317 | 161 | 6 | 14 | 326 | 14 | 321 | 5.22e-82 | 253 |
MS.gene74597.t1 | AT4G11290 | 42.415 | 323 | 181 | 4 | 10 | 330 | 7 | 326 | 5.50e-82 | 253 |
MS.gene74597.t1 | AT5G17820 | 42.271 | 317 | 170 | 6 | 14 | 330 | 63 | 366 | 1.13e-81 | 253 |
MS.gene74597.t1 | AT2G22420 | 42.763 | 304 | 169 | 3 | 29 | 332 | 23 | 321 | 2.60e-81 | 251 |
MS.gene74597.t1 | AT4G25980 | 42.331 | 326 | 173 | 6 | 10 | 330 | 11 | 326 | 3.46e-81 | 251 |
MS.gene74597.t1 | AT2G35380 | 46.865 | 303 | 157 | 3 | 32 | 330 | 33 | 335 | 4.51e-81 | 251 |
MS.gene74597.t1 | AT5G51890 | 42.188 | 320 | 176 | 6 | 14 | 330 | 9 | 322 | 9.04e-81 | 249 |
MS.gene74597.t1 | AT1G05260 | 42.073 | 328 | 181 | 7 | 6 | 330 | 4 | 325 | 9.17e-81 | 249 |
MS.gene74597.t1 | AT5G39580 | 42.598 | 331 | 174 | 7 | 1 | 330 | 4 | 319 | 2.87e-79 | 245 |
MS.gene74597.t1 | AT3G01190 | 40.854 | 328 | 184 | 8 | 6 | 330 | 1 | 321 | 2.80e-78 | 243 |
MS.gene74597.t1 | AT4G30170 | 43.548 | 310 | 162 | 5 | 26 | 330 | 24 | 325 | 3.37e-77 | 240 |
MS.gene74597.t1 | AT2G18980 | 43.293 | 328 | 167 | 7 | 10 | 330 | 8 | 323 | 6.77e-77 | 239 |
MS.gene74597.t1 | AT5G15180 | 40.584 | 308 | 176 | 6 | 25 | 330 | 27 | 329 | 2.66e-76 | 238 |
MS.gene74597.t1 | AT1G05240 | 40.193 | 311 | 166 | 6 | 29 | 330 | 26 | 325 | 6.24e-76 | 237 |
MS.gene74597.t1 | AT1G05250 | 40.193 | 311 | 166 | 6 | 29 | 330 | 26 | 325 | 6.24e-76 | 237 |
MS.gene74597.t1 | AT4G37530 | 42.903 | 310 | 170 | 5 | 25 | 330 | 23 | 329 | 9.07e-74 | 232 |
MS.gene74597.t1 | AT5G14130 | 40.379 | 317 | 182 | 3 | 18 | 330 | 17 | 330 | 3.64e-73 | 230 |
MS.gene74597.t1 | AT5G42180 | 40.248 | 323 | 183 | 7 | 8 | 329 | 3 | 316 | 4.32e-73 | 229 |
MS.gene74597.t1 | AT5G64110 | 44.554 | 303 | 155 | 7 | 32 | 330 | 37 | 330 | 4.42e-73 | 230 |
MS.gene74597.t1 | AT5G67400 | 40.719 | 334 | 189 | 6 | 1 | 330 | 1 | 329 | 5.61e-73 | 229 |
MS.gene74597.t1 | AT5G14130 | 40.694 | 317 | 181 | 3 | 18 | 330 | 58 | 371 | 8.76e-73 | 231 |
MS.gene74597.t1 | AT5G64100 | 41.722 | 302 | 163 | 6 | 32 | 330 | 40 | 331 | 1.47e-72 | 229 |
MS.gene74597.t1 | AT4G33420 | 39.937 | 318 | 177 | 7 | 14 | 330 | 21 | 325 | 8.01e-71 | 224 |
MS.gene74597.t1 | AT4G33420 | 39.937 | 318 | 177 | 7 | 14 | 330 | 68 | 372 | 2.44e-70 | 224 |
MS.gene74597.t1 | AT3G49960 | 40.798 | 326 | 181 | 6 | 10 | 330 | 11 | 329 | 2.54e-70 | 223 |
MS.gene74597.t1 | AT4G26010 | 39.130 | 322 | 180 | 6 | 10 | 330 | 31 | 337 | 2.27e-68 | 218 |
MS.gene74597.t1 | AT4G26010 | 39.130 | 322 | 180 | 6 | 10 | 330 | 3 | 309 | 2.72e-68 | 217 |
MS.gene74597.t1 | AT2G39040 | 42.122 | 311 | 169 | 7 | 27 | 330 | 44 | 350 | 3.13e-68 | 218 |
MS.gene74597.t1 | AT1G30870 | 39.474 | 304 | 171 | 7 | 33 | 333 | 55 | 348 | 3.81e-68 | 218 |
MS.gene74597.t1 | AT1G77100 | 38.485 | 330 | 187 | 7 | 6 | 330 | 1 | 319 | 2.24e-66 | 212 |
MS.gene74597.t1 | AT5G40150 | 40.127 | 314 | 181 | 5 | 18 | 330 | 21 | 328 | 4.33e-66 | 212 |
MS.gene74597.t1 | AT4G37520 | 40.129 | 309 | 176 | 5 | 27 | 330 | 25 | 329 | 4.80e-66 | 212 |
MS.gene74597.t1 | AT4G37520 | 39.806 | 309 | 174 | 6 | 27 | 330 | 25 | 326 | 1.16e-64 | 208 |
MS.gene74597.t1 | AT4G31760 | 35.629 | 334 | 200 | 5 | 2 | 330 | 3 | 326 | 3.24e-64 | 207 |
MS.gene74597.t1 | AT2G43480 | 37.092 | 337 | 181 | 9 | 14 | 330 | 10 | 335 | 8.32e-64 | 206 |
MS.gene74597.t1 | AT3G28200 | 38.065 | 310 | 180 | 5 | 24 | 330 | 16 | 316 | 6.66e-63 | 203 |
MS.gene74597.t1 | AT4G33870 | 33.434 | 332 | 179 | 6 | 33 | 327 | 72 | 398 | 2.74e-62 | 204 |
MS.gene74597.t1 | AT4G37530 | 43.798 | 258 | 140 | 4 | 25 | 278 | 23 | 279 | 2.75e-62 | 201 |
MS.gene74597.t1 | AT5G24070 | 35.843 | 332 | 198 | 6 | 6 | 330 | 12 | 335 | 4.31e-62 | 202 |
MS.gene74597.t1 | AT5G22410 | 37.072 | 321 | 184 | 11 | 14 | 326 | 11 | 321 | 1.64e-61 | 200 |
MS.gene74597.t1 | AT2G24800 | 38.312 | 308 | 179 | 5 | 27 | 330 | 29 | 329 | 3.18e-61 | 199 |
MS.gene74597.t1 | AT1G34510 | 39.048 | 315 | 176 | 6 | 17 | 330 | 10 | 309 | 4.03e-61 | 199 |
MS.gene74597.t1 | AT4G17690 | 38.835 | 309 | 172 | 6 | 29 | 331 | 26 | 323 | 9.50e-61 | 198 |
MS.gene74597.t1 | AT2G35380 | 47.368 | 247 | 126 | 3 | 88 | 330 | 1 | 247 | 1.23e-60 | 195 |
MS.gene74597.t1 | AT2G34060 | 38.961 | 308 | 179 | 6 | 26 | 327 | 39 | 343 | 1.40e-60 | 198 |
MS.gene74597.t1 | AT5G47000 | 36.223 | 323 | 195 | 6 | 11 | 330 | 16 | 330 | 1.26e-56 | 187 |
MS.gene74597.t1 | AT3G17070 | 36.747 | 332 | 194 | 9 | 6 | 330 | 17 | 339 | 1.72e-55 | 185 |
MS.gene74597.t1 | AT1G24110 | 36.533 | 323 | 196 | 6 | 11 | 330 | 6 | 322 | 8.38e-55 | 182 |
MS.gene74597.t1 | AT4G21960 | 36.424 | 302 | 181 | 4 | 33 | 331 | 35 | 328 | 1.35e-54 | 182 |
MS.gene74597.t1 | AT2G37130 | 35.922 | 309 | 186 | 5 | 26 | 330 | 27 | 327 | 4.69e-53 | 178 |
MS.gene74597.t1 | AT2G37130 | 36.093 | 302 | 181 | 5 | 33 | 330 | 3 | 296 | 1.08e-51 | 174 |
MS.gene74597.t1 | AT4G25980 | 44.974 | 189 | 96 | 4 | 10 | 198 | 56 | 236 | 1.09e-45 | 158 |
MS.gene74597.t1 | AT5G39580 | 41.379 | 203 | 107 | 4 | 1 | 203 | 4 | 194 | 1.52e-39 | 140 |
MS.gene74597.t1 | AT3G17070 | 35.714 | 266 | 158 | 8 | 71 | 330 | 18 | 276 | 4.99e-37 | 135 |
MS.gene74597.t1 | AT2G24800 | 37.688 | 199 | 118 | 2 | 27 | 223 | 29 | 223 | 1.86e-31 | 119 |
MS.gene74597.t1 | AT3G42570 | 34.259 | 108 | 69 | 2 | 90 | 196 | 43 | 149 | 2.50e-11 | 61.6 |
Find 76 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTATTGAGTTGATATT+TGG | 0.090707 | 2.3:-60477748 | None:intergenic |
AAAGAAAGCACTTTGGTTAT+TGG | 0.160435 | 2.3:-60478605 | None:intergenic |
CAACAATCTTAAGGTTAAAA+AGG | 0.165114 | 2.3:+60478510 | MS.gene74597:CDS |
TAAGTTAGCAATGATTAAAA+TGG | 0.187473 | 2.3:+60478636 | MS.gene74597:CDS |
TCTTATTTCTCCTTTCTTTC+CGG | 0.196788 | 2.3:-60478677 | None:intergenic |
GTTGATCTAGTAGCACTTTC+AGG | 0.229688 | 2.3:+60478154 | MS.gene74597:CDS |
TCAGCACAAGAAACTGTATT+AGG | 0.241051 | 2.3:-60477817 | None:intergenic |
ATATGGTTAGTTCAATTTAA+AGG | 0.264013 | 2.3:+60478779 | MS.gene74597:CDS |
CAAAATCAATGTCCTCAAAA+TGG | 0.300543 | 2.3:+60478424 | MS.gene74597:CDS |
GGTAATATTGGTGTGCTTAC+CGG | 0.310448 | 2.3:+60478658 | MS.gene74597:CDS |
TTTCCAGGTGCACATACATT+TGG | 0.313349 | 2.3:+60478304 | MS.gene74597:intron |
CGGACAATGGAATTAAGATT+TGG | 0.317064 | 2.3:-60477456 | None:intergenic |
ACAATCATTTGAAGAGGATA+TGG | 0.318003 | 2.3:+60478762 | MS.gene74597:CDS |
CCATTGTCCGCGAAATTGTT+AGG | 0.323414 | 2.3:+60477469 | MS.gene74597:CDS |
AGCGGTGTTGTTCAGCAAAA+TGG | 0.327975 | 2.3:-60477698 | None:intergenic |
ATGATTAAAATGGGTAATAT+TGG | 0.337677 | 2.3:+60478646 | MS.gene74597:CDS |
CTCTTATTGAGTTGATATTT+GGG | 0.344354 | 2.3:-60477747 | None:intergenic |
GATTAGAATCGCAGGCATTC+GGG | 0.346517 | 2.3:-60477511 | None:intergenic |
TGTTGTATTGTGGTTGTGTT+TGG | 0.352959 | 2.3:+60477375 | MS.gene74597:CDS |
TTCCAGGTGCACATACATTT+GGG | 0.378964 | 2.3:+60478305 | MS.gene74597:intron |
TGAGTTGGATCTTGCTACTT+TGG | 0.383736 | 2.3:+60478732 | MS.gene74597:CDS |
AAATTGACACGGTTATTTCC+AGG | 0.386875 | 2.3:-60478448 | None:intergenic |
GAACTTCTACAACAATCTTA+AGG | 0.390275 | 2.3:+60478501 | MS.gene74597:CDS |
CCAAATATCAACTCAATAAG+AGG | 0.396698 | 2.3:+60477748 | MS.gene74597:CDS |
GAATGCCTGCGATTCTAATC+AGG | 0.398260 | 2.3:+60477514 | MS.gene74597:CDS |
TTGGTGTTGAGAACAATTCT+TGG | 0.399811 | 2.3:-60478549 | None:intergenic |
GTTGACTTAGATTGAAGAAA+GGG | 0.406948 | 2.3:-60478096 | None:intergenic |
CAGCACAAGAAACTGTATTA+GGG | 0.409122 | 2.3:-60477816 | None:intergenic |
TGATTAGAATCGCAGGCATT+CGG | 0.410469 | 2.3:-60477512 | None:intergenic |
TCCAATGTATCAGGAGTAGT+TGG | 0.413628 | 2.3:-60478475 | None:intergenic |
AAGTTCTTGTCCAATGTATC+AGG | 0.418842 | 2.3:-60478484 | None:intergenic |
TATCAACTCAATAAGAGGTT+TGG | 0.425558 | 2.3:+60477753 | MS.gene74597:CDS |
GACTATCCCTTCTTCCCAAT+GGG | 0.434405 | 2.3:-60478033 | None:intergenic |
TCCCAATGGGACGATCCAAC+CGG | 0.436069 | 2.3:-60478020 | None:intergenic |
CCCAACTACTCCTGATACAT+TGG | 0.443362 | 2.3:+60478474 | MS.gene74597:CDS |
CCCGGTTGGATCGTCCCATT+GGG | 0.451622 | 2.3:+60478019 | MS.gene74597:CDS |
AAGTTAGCAATGATTAAAAT+GGG | 0.464811 | 2.3:+60478637 | MS.gene74597:CDS |
GGATCGTCCCATTGGGAAGA+AGG | 0.482573 | 2.3:+60478026 | MS.gene74597:CDS |
AGTTGTGCATTTGAAGAGAA+AGG | 0.483065 | 2.3:-60477405 | None:intergenic |
AACTTCTTTGTGTTGTATTG+TGG | 0.486288 | 2.3:+60477365 | MS.gene74597:CDS |
TCCCGGTTGGATCGTCCCAT+TGG | 0.487324 | 2.3:+60478018 | MS.gene74597:CDS |
AAATCTTCCTTTGCTGCTCA+AGG | 0.493742 | 2.3:+60478121 | MS.gene74597:CDS |
ATGCTAGTGGTATCTGCATT+TGG | 0.498934 | 2.3:-60478568 | None:intergenic |
GTTATATCAAGAGTTGGATC+AGG | 0.500805 | 2.3:-60478385 | None:intergenic |
AGTTGACTTAGATTGAAGAA+AGG | 0.501508 | 2.3:-60478097 | None:intergenic |
TTATACAACTTCAGCTATAC+CGG | 0.504271 | 2.3:+60478358 | MS.gene74597:CDS |
CTTAGATTGAAGAAAGGGGC+TGG | 0.506747 | 2.3:-60478091 | None:intergenic |
TGCTAGATTATCTTCCGTCC+TGG | 0.509986 | 2.3:+60477855 | MS.gene74597:CDS |
AGCTCTCAAAGAAAGCACTT+TGG | 0.512915 | 2.3:-60478612 | None:intergenic |
TAAAGTTCCTAACAATTTCG+CGG | 0.516651 | 2.3:-60477476 | None:intergenic |
CAATGTCCTCAAAATGGACC+TGG | 0.519796 | 2.3:+60478430 | MS.gene74597:CDS |
AAGTACGTTATATCAAGAGT+TGG | 0.528818 | 2.3:-60478391 | None:intergenic |
AGACTATCCCTTCTTCCCAA+TGG | 0.535271 | 2.3:-60478034 | None:intergenic |
CCTAACAATTTCGCGGACAA+TGG | 0.535540 | 2.3:-60477469 | None:intergenic |
GGTGTGCTTACCGGAAAGAA+AGG | 0.536908 | 2.3:+60478667 | MS.gene74597:CDS |
AATCTATATTCACAGAGTAA+AGG | 0.540472 | 2.3:+60477995 | MS.gene74597:intron |
GTTGAGACCTTGAGCAGCAA+AGG | 0.560250 | 2.3:-60478128 | None:intergenic |
TGAAGCCTGATTAGAATCGC+AGG | 0.570742 | 2.3:-60477519 | None:intergenic |
CCCAATGGGACGATCCAACC+GGG | 0.571337 | 2.3:-60478019 | None:intergenic |
CCAATGTATCAGGAGTAGTT+GGG | 0.573997 | 2.3:-60478474 | None:intergenic |
CACAGAGTAAAGGTCCCGGT+TGG | 0.588840 | 2.3:+60478005 | MS.gene74597:intron |
ATCCTCTTCAAATGATTGTG+TGG | 0.601274 | 2.3:-60478758 | None:intergenic |
AAGAGTTGGATCAGGTTCAC+CGG | 0.605304 | 2.3:-60478377 | None:intergenic |
TATTCACAGAGTAAAGGTCC+CGG | 0.611425 | 2.3:+60478001 | MS.gene74597:intron |
CTCCACACAATCATTTGAAG+AGG | 0.618820 | 2.3:+60478756 | MS.gene74597:CDS |
AGAAGTTGCTATGAGACGAA+AGG | 0.623304 | 2.3:-60477349 | None:intergenic |
CTCTTCAAATGATTGTGTGG+AGG | 0.635008 | 2.3:-60478755 | None:intergenic |
GAAGTTATTAACAATGCTAG+TGG | 0.635363 | 2.3:-60478581 | None:intergenic |
TGCTGCTCAAGGTCTCAACA+CGG | 0.635681 | 2.3:+60478132 | MS.gene74597:CDS |
GATCGTCCCATTGGGAAGAA+GGG | 0.636305 | 2.3:+60478027 | MS.gene74597:CDS |
TTGACTTAGATTGAAGAAAG+GGG | 0.637018 | 2.3:-60478095 | None:intergenic |
ATTAGAATCGCAGGCATTCG+GGG | 0.639730 | 2.3:-60477510 | None:intergenic |
TAGTTCGCTCACGATAGTAG+CGG | 0.662143 | 2.3:-60477716 | None:intergenic |
TAGACATATATGTACCAGGA+CGG | 0.679606 | 2.3:-60477869 | None:intergenic |
TAGTTGGGTCGAAATTGACA+CGG | 0.696351 | 2.3:-60478459 | None:intergenic |
GAATCGTATCAAGACAGACG+TGG | 0.712582 | 2.3:+60477783 | MS.gene74597:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATTATTAATTATTGAAAC+AGG | + | chr2.3:60477663-60477682 | MS.gene74597:intron | 15.0% |
!! | CATTATTAATTATTGAAACA+GGG | + | chr2.3:60477664-60477683 | MS.gene74597:intron | 15.0% |
!! | AACAATCTTAAGGTTAAAAA+GGG | + | chr2.3:60478511-60478530 | MS.gene74597:CDS | 20.0% |
!! | AAGTTAGCAATGATTAAAAT+GGG | + | chr2.3:60478637-60478656 | MS.gene74597:CDS | 20.0% |
!! | ATGATTAAAATGGGTAATAT+TGG | + | chr2.3:60478646-60478665 | MS.gene74597:CDS | 20.0% |
!! | TAAGTTAGCAATGATTAAAA+TGG | + | chr2.3:60478636-60478655 | MS.gene74597:CDS | 20.0% |
!! | TTAATAATGATAATCTGACA+GGG | - | chr2.3:60477598-60477617 | None:intergenic | 20.0% |
!! | TTTAATAATGATAATCTGAC+AGG | - | chr2.3:60477599-60477618 | None:intergenic | 20.0% |
! | AATCTATATTCACAGAGTAA+AGG | + | chr2.3:60477995-60478014 | MS.gene74597:intron | 25.0% |
! | CAACAATCTTAAGGTTAAAA+AGG | + | chr2.3:60478510-60478529 | MS.gene74597:CDS | 25.0% |
! | TAACAAAAAATCTTCTGAGT+TGG | + | chr2.3:60478717-60478736 | MS.gene74597:CDS | 25.0% |
! | TCCATCACGTATAATATTTA+AGG | - | chr2.3:60478254-60478273 | None:intergenic | 25.0% |
! | TCCTTAAATATTATACGTGA+TGG | + | chr2.3:60478250-60478269 | MS.gene74597:intron | 25.0% |
!!! | CTCTTATTGAGTTGATATTT+GGG | - | chr2.3:60477750-60477769 | None:intergenic | 25.0% |
AACTTCTTTGTGTTGTATTG+TGG | + | chr2.3:60477365-60477384 | MS.gene74597:CDS | 30.0% | |
AAGTACGTTATATCAAGAGT+TGG | - | chr2.3:60478394-60478413 | None:intergenic | 30.0% | |
ACAATCATTTGAAGAGGATA+TGG | + | chr2.3:60478762-60478781 | MS.gene74597:CDS | 30.0% | |
CAAAATCAATGTCCTCAAAA+TGG | + | chr2.3:60478424-60478443 | MS.gene74597:CDS | 30.0% | |
CCAAATATCAACTCAATAAG+AGG | + | chr2.3:60477748-60477767 | MS.gene74597:CDS | 30.0% | |
GAACTTCTACAACAATCTTA+AGG | + | chr2.3:60478501-60478520 | MS.gene74597:CDS | 30.0% | |
GAAGTTATTAACAATGCTAG+TGG | - | chr2.3:60478584-60478603 | None:intergenic | 30.0% | |
TAAAGTTCCTAACAATTTCG+CGG | - | chr2.3:60477479-60477498 | None:intergenic | 30.0% | |
TATCAACTCAATAAGAGGTT+TGG | + | chr2.3:60477753-60477772 | MS.gene74597:CDS | 30.0% | |
TTATACAACTTCAGCTATAC+CGG | + | chr2.3:60478358-60478377 | MS.gene74597:CDS | 30.0% | |
TTGACTTAGATTGAAGAAAG+GGG | - | chr2.3:60478098-60478117 | None:intergenic | 30.0% | |
! | AGTTGACTTAGATTGAAGAA+AGG | - | chr2.3:60478100-60478119 | None:intergenic | 30.0% |
! | GTTGACTTAGATTGAAGAAA+GGG | - | chr2.3:60478099-60478118 | None:intergenic | 30.0% |
! | TCTTATTTCTCCTTTCTTTC+CGG | - | chr2.3:60478680-60478699 | None:intergenic | 30.0% |
! | TTTATATGCCTGAATTTTCC+AGG | + | chr2.3:60478289-60478308 | MS.gene74597:intron | 30.0% |
!! | AAAGAAAGCACTTTGGTTAT+TGG | - | chr2.3:60478608-60478627 | None:intergenic | 30.0% |
!! | CCTCTTATTGAGTTGATATT+TGG | - | chr2.3:60477751-60477770 | None:intergenic | 30.0% |
!!! | TGGAAGATTTTGATTTGCAA+GGG | - | chr2.3:60478074-60478093 | None:intergenic | 30.0% |
AAGTTCTTGTCCAATGTATC+AGG | - | chr2.3:60478487-60478506 | None:intergenic | 35.0% | |
AGTTGTGCATTTGAAGAGAA+AGG | - | chr2.3:60477408-60477427 | None:intergenic | 35.0% | |
ATCCTCTTCAAATGATTGTG+TGG | - | chr2.3:60478761-60478780 | None:intergenic | 35.0% | |
CAGCACAAGAAACTGTATTA+GGG | - | chr2.3:60477819-60477838 | None:intergenic | 35.0% | |
CGGACAATGGAATTAAGATT+TGG | - | chr2.3:60477459-60477478 | None:intergenic | 35.0% | |
GATCACTTGCTTAGAAAATG+TGG | - | chr2.3:60478194-60478213 | None:intergenic | 35.0% | |
GTTATATCAAGAGTTGGATC+AGG | - | chr2.3:60478388-60478407 | None:intergenic | 35.0% | |
TAGACATATATGTACCAGGA+CGG | - | chr2.3:60477872-60477891 | None:intergenic | 35.0% | |
TAGCTAGACATATATGTACC+AGG | - | chr2.3:60477876-60477895 | None:intergenic | 35.0% | |
TCAGCACAAGAAACTGTATT+AGG | - | chr2.3:60477820-60477839 | None:intergenic | 35.0% | |
TGTTGTATTGTGGTTGTGTT+TGG | + | chr2.3:60477375-60477394 | MS.gene74597:CDS | 35.0% | |
! | AAATTGACACGGTTATTTCC+AGG | - | chr2.3:60478451-60478470 | None:intergenic | 35.0% |
! | TTATTTCCAGGTCCATTTTG+AGG | - | chr2.3:60478439-60478458 | None:intergenic | 35.0% |
!! | CAAGTTTTGCTGTAAAAGGA+TGG | - | chr2.3:60477435-60477454 | None:intergenic | 35.0% |
!! | TGGACAAGTTTTGCTGTAAA+AGG | - | chr2.3:60477439-60477458 | None:intergenic | 35.0% |
!! | TTGGTGTTGAGAACAATTCT+TGG | - | chr2.3:60478552-60478571 | None:intergenic | 35.0% |
!!! | CTGGAAGATTTTGATTTGCA+AGG | - | chr2.3:60478075-60478094 | None:intergenic | 35.0% |
AAATCTTCCTTTGCTGCTCA+AGG | + | chr2.3:60478121-60478140 | MS.gene74597:CDS | 40.0% | |
AGAAGTTGCTATGAGACGAA+AGG | - | chr2.3:60477352-60477371 | None:intergenic | 40.0% | |
ATGCTAGTGGTATCTGCATT+TGG | - | chr2.3:60478571-60478590 | None:intergenic | 40.0% | |
CCAATGTATCAGGAGTAGTT+GGG | - | chr2.3:60478477-60478496 | None:intergenic | 40.0% | |
CTCCACACAATCATTTGAAG+AGG | + | chr2.3:60478756-60478775 | MS.gene74597:CDS | 40.0% | |
CTCTTCAAATGATTGTGTGG+AGG | - | chr2.3:60478758-60478777 | None:intergenic | 40.0% | |
GGTAATATTGGTGTGCTTAC+CGG | + | chr2.3:60478658-60478677 | MS.gene74597:CDS | 40.0% | |
GTTGATCTAGTAGCACTTTC+AGG | + | chr2.3:60478154-60478173 | MS.gene74597:CDS | 40.0% | |
TAGTTGGGTCGAAATTGACA+CGG | - | chr2.3:60478462-60478481 | None:intergenic | 40.0% | |
TATGTGCACCTGGAAAATTC+AGG | - | chr2.3:60478300-60478319 | None:intergenic | 40.0% | |
TATTCACAGAGTAAAGGTCC+CGG | + | chr2.3:60478001-60478020 | MS.gene74597:intron | 40.0% | |
TCCAATGTATCAGGAGTAGT+TGG | - | chr2.3:60478478-60478497 | None:intergenic | 40.0% | |
TGATTAGAATCGCAGGCATT+CGG | - | chr2.3:60477515-60477534 | None:intergenic | 40.0% | |
TTCCAGGTGCACATACATTT+GGG | + | chr2.3:60478305-60478324 | MS.gene74597:intron | 40.0% | |
TTTCCAGGTGCACATACATT+TGG | + | chr2.3:60478304-60478323 | MS.gene74597:intron | 40.0% | |
! | TGAGTTGGATCTTGCTACTT+TGG | + | chr2.3:60478732-60478751 | MS.gene74597:CDS | 40.0% |
!! | AGCTCTCAAAGAAAGCACTT+TGG | - | chr2.3:60478615-60478634 | None:intergenic | 40.0% |
AAGAGTTGGATCAGGTTCAC+CGG | - | chr2.3:60478380-60478399 | None:intergenic | 45.0% | |
AGACTATCCCTTCTTCCCAA+TGG | - | chr2.3:60478037-60478056 | None:intergenic | 45.0% | |
ATTAGAATCGCAGGCATTCG+GGG | - | chr2.3:60477513-60477532 | None:intergenic | 45.0% | |
CAATGTCCTCAAAATGGACC+TGG | + | chr2.3:60478430-60478449 | MS.gene74597:CDS | 45.0% | |
CCATTGTCCGCGAAATTGTT+AGG | + | chr2.3:60477469-60477488 | MS.gene74597:CDS | 45.0% | |
CCCAACTACTCCTGATACAT+TGG | + | chr2.3:60478474-60478493 | MS.gene74597:CDS | 45.0% | |
CCTAACAATTTCGCGGACAA+TGG | - | chr2.3:60477472-60477491 | None:intergenic | 45.0% | |
CTTAGATTGAAGAAAGGGGC+TGG | - | chr2.3:60478094-60478113 | None:intergenic | 45.0% | |
GAATCGTATCAAGACAGACG+TGG | + | chr2.3:60477783-60477802 | MS.gene74597:CDS | 45.0% | |
GAATGCCTGCGATTCTAATC+AGG | + | chr2.3:60477514-60477533 | MS.gene74597:CDS | 45.0% | |
GACTATCCCTTCTTCCCAAT+GGG | - | chr2.3:60478036-60478055 | None:intergenic | 45.0% | |
GATTAGAATCGCAGGCATTC+GGG | - | chr2.3:60477514-60477533 | None:intergenic | 45.0% | |
TAGTTCGCTCACGATAGTAG+CGG | - | chr2.3:60477719-60477738 | None:intergenic | 45.0% | |
TGAAGCCTGATTAGAATCGC+AGG | - | chr2.3:60477522-60477541 | None:intergenic | 45.0% | |
TGCTAGATTATCTTCCGTCC+TGG | + | chr2.3:60477855-60477874 | MS.gene74597:CDS | 45.0% | |
TTCCCAAATGTATGTGCACC+TGG | - | chr2.3:60478310-60478329 | None:intergenic | 45.0% | |
!! | AGCGGTGTTGTTCAGCAAAA+TGG | - | chr2.3:60477701-60477720 | None:intergenic | 45.0% |
!! | AAAAAAAAAAAAACATTATA+TGG | + | chr2.3:60477957-60477976 | MS.gene74597:intron | 5.0% |
!!! | AATGTTTTTTTTTTTTTTAA+GGG | - | chr2.3:60477954-60477973 | None:intergenic | 5.0% |
!!! | TAATGTTTTTTTTTTTTTTA+AGG | - | chr2.3:60477955-60477974 | None:intergenic | 5.0% |
GATCGTCCCATTGGGAAGAA+GGG | + | chr2.3:60478027-60478046 | MS.gene74597:CDS | 50.0% | |
GGTGTGCTTACCGGAAAGAA+AGG | + | chr2.3:60478667-60478686 | MS.gene74597:CDS | 50.0% | |
GTTGAGACCTTGAGCAGCAA+AGG | - | chr2.3:60478131-60478150 | None:intergenic | 50.0% | |
TGCTGCTCAAGGTCTCAACA+CGG | + | chr2.3:60478132-60478151 | MS.gene74597:CDS | 50.0% | |
CACAGAGTAAAGGTCCCGGT+TGG | + | chr2.3:60478005-60478024 | MS.gene74597:intron | 55.0% | |
GGATCGTCCCATTGGGAAGA+AGG | + | chr2.3:60478026-60478045 | MS.gene74597:CDS | 55.0% | |
TCCCAATGGGACGATCCAAC+CGG | - | chr2.3:60478023-60478042 | None:intergenic | 55.0% | |
CCCAATGGGACGATCCAACC+GGG | - | chr2.3:60478022-60478041 | None:intergenic | 60.0% | |
CCCGGTTGGATCGTCCCATT+GGG | + | chr2.3:60478019-60478038 | MS.gene74597:CDS | 60.0% | |
TCCCGGTTGGATCGTCCCAT+TGG | + | chr2.3:60478018-60478037 | MS.gene74597:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 60477342 | 60478798 | 60477342 | ID=MS.gene74597 |
chr2.3 | mRNA | 60477342 | 60478798 | 60477342 | ID=MS.gene74597.t1;Parent=MS.gene74597 |
chr2.3 | exon | 60477342 | 60477563 | 60477342 | ID=MS.gene74597.t1.exon1;Parent=MS.gene74597.t1 |
chr2.3 | CDS | 60477342 | 60477563 | 60477342 | ID=cds.MS.gene74597.t1;Parent=MS.gene74597.t1 |
chr2.3 | exon | 60477685 | 60477876 | 60477685 | ID=MS.gene74597.t1.exon2;Parent=MS.gene74597.t1 |
chr2.3 | CDS | 60477685 | 60477876 | 60477685 | ID=cds.MS.gene74597.t1;Parent=MS.gene74597.t1 |
chr2.3 | exon | 60478010 | 60478175 | 60478010 | ID=MS.gene74597.t1.exon3;Parent=MS.gene74597.t1 |
chr2.3 | CDS | 60478010 | 60478175 | 60478010 | ID=cds.MS.gene74597.t1;Parent=MS.gene74597.t1 |
chr2.3 | exon | 60478311 | 60478798 | 60478311 | ID=MS.gene74597.t1.exon4;Parent=MS.gene74597.t1 |
chr2.3 | CDS | 60478311 | 60478798 | 60478311 | ID=cds.MS.gene74597.t1;Parent=MS.gene74597.t1 |
Gene Sequence |
Protein sequence |