AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003275

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003275.t1 MTR_2g029730 93.043 345 24 0 1 345 1 345 0.0 655
MS.gene003275.t1 MTR_2g029560 84.058 345 54 1 1 345 1 344 0.0 590
MS.gene003275.t1 MTR_2g029820 64.326 356 115 3 1 345 1 355 3.66e-163 460
MS.gene003275.t1 MTR_2g029740 66.176 340 109 2 1 335 1 339 9.79e-161 454
MS.gene003275.t1 MTR_2g029815 64.873 353 115 3 1 345 1 352 2.28e-160 452
MS.gene003275.t1 MTR_2g029800 65.698 344 109 3 11 345 10 353 1.14e-159 451
MS.gene003275.t1 MTR_2g029830 66.867 332 103 1 8 332 4 335 1.72e-159 451
MS.gene003275.t1 MTR_2g029750 66.163 331 107 1 7 332 6 336 4.02e-157 444
MS.gene003275.t1 MTR_2g029850 64.689 354 114 4 1 345 1 352 2.10e-155 440
MS.gene003275.t1 MTR_2g029860 64.857 350 111 4 8 345 4 353 5.63e-152 431
MS.gene003275.t1 MTR_2g028980 63.501 337 117 2 1 332 1 336 5.81e-151 429
MS.gene003275.t1 MTR_2g029910 62.682 343 120 3 11 345 11 353 1.95e-149 425
MS.gene003275.t1 MTR_2g029830 72.624 263 72 0 70 332 5 267 2.08e-137 392
MS.gene003275.t1 MTR_7g093370 56.869 313 134 1 16 327 60 372 4.15e-121 353
MS.gene003275.t1 MTR_1g054205 53.560 323 149 1 6 327 5 327 1.43e-118 345
MS.gene003275.t1 MTR_4g125940 54.934 304 133 2 25 326 28 329 4.50e-110 324
MS.gene003275.t1 MTR_5g021060 51.485 303 146 1 24 326 29 330 4.70e-110 324
MS.gene003275.t1 MTR_8g076820 49.505 303 152 1 24 326 29 330 4.59e-107 317
MS.gene003275.t1 MTR_4g125940 57.455 275 113 2 54 326 2 274 8.76e-104 306
MS.gene003275.t1 MTR_5g017860 52.174 299 139 3 29 326 31 326 1.03e-103 308
MS.gene003275.t1 MTR_5g017850 51.505 299 141 3 29 326 31 326 1.06e-102 305
MS.gene003275.t1 MTR_5g074970 47.147 333 160 5 1 326 3 326 8.49e-101 300
MS.gene003275.t1 MTR_1g022970 49.007 302 154 0 25 326 46 347 1.60e-100 300
MS.gene003275.t1 MTR_2g040000 50.164 305 147 2 25 326 29 331 2.21e-100 300
MS.gene003275.t1 MTR_4g029200 48.852 305 147 2 22 326 43 338 2.64e-96 289
MS.gene003275.t1 MTR_3g466200 47.040 321 157 5 10 326 9 320 2.70e-95 286
MS.gene003275.t1 MTR_4g122640 46.037 328 167 3 6 326 12 336 8.84e-95 285
MS.gene003275.t1 MTR_4g029190 47.840 324 157 5 6 326 26 340 1.48e-93 282
MS.gene003275.t1 MTR_7g072510 47.020 302 151 2 25 326 20 312 1.74e-93 281
MS.gene003275.t1 MTR_3g094650 50.331 302 139 3 23 322 26 318 3.47e-93 281
MS.gene003275.t1 MTR_7g072480 48.013 302 148 2 25 326 24 316 6.82e-92 277
MS.gene003275.t1 MTR_5g074760 48.534 307 147 5 25 328 25 323 7.10e-92 277
MS.gene003275.t1 MTR_2g084110 47.987 298 146 2 29 326 29 317 7.60e-92 277
MS.gene003275.t1 MTR_5g083860 47.697 304 148 3 25 326 31 325 1.06e-91 277
MS.gene003275.t1 MTR_2g084080 47.651 298 147 2 29 326 29 317 2.20e-91 276
MS.gene003275.t1 MTR_3g072190 46.026 302 154 2 25 326 26 318 1.68e-90 274
MS.gene003275.t1 MTR_4g083710 45.921 331 167 5 1 326 1 324 4.25e-90 273
MS.gene003275.t1 MTR_5g014100 47.097 310 160 2 21 326 22 331 6.10e-90 273
MS.gene003275.t1 MTR_5g074710 45.897 329 167 5 1 326 1 321 4.89e-89 270
MS.gene003275.t1 MTR_5g074740 47.541 305 149 5 25 326 25 321 2.09e-88 268
MS.gene003275.t1 MTR_5g049280 44.620 316 164 6 18 326 26 337 2.73e-88 269
MS.gene003275.t1 MTR_2g084020 46.644 298 151 2 29 326 29 318 1.07e-87 266
MS.gene003275.t1 MTR_5g074860 48.039 306 148 5 23 325 27 324 1.68e-87 266
MS.gene003275.t1 MTR_2g084090 45.902 305 155 3 23 326 23 318 3.57e-87 265
MS.gene003275.t1 MTR_3g094670 47.022 319 157 4 6 322 10 318 1.43e-86 264
MS.gene003275.t1 MTR_2g084010 46.358 302 154 2 25 326 25 318 1.43e-86 264
MS.gene003275.t1 MTR_4g029170 45.141 319 162 5 11 326 13 321 2.00e-86 263
MS.gene003275.t1 MTR_4g029180 47.000 300 148 4 29 326 31 321 8.36e-86 262
MS.gene003275.t1 MTR_4g133800 45.667 300 148 7 30 326 46 333 1.34e-85 262
MS.gene003275.t1 MTR_1g115900 45.246 305 156 5 25 327 27 322 6.35e-85 260
MS.gene003275.t1 MTR_2g084000 45.066 304 159 3 23 326 24 319 8.00e-85 259
MS.gene003275.t1 MTR_3g094630 47.284 313 154 3 16 326 19 322 2.54e-84 258
MS.gene003275.t1 MTR_4g074995 46.254 307 142 4 23 326 22 308 5.28e-84 257
MS.gene003275.t1 MTR_7g026990 44.371 302 152 5 29 327 35 323 2.01e-83 256
MS.gene003275.t1 MTR_4g030890 44.371 302 163 3 25 326 100 396 3.30e-82 256
MS.gene003275.t1 MTR_2g008710 45.033 302 155 5 29 326 31 325 4.74e-82 252
MS.gene003275.t1 MTR_2g088770 43.648 307 167 5 22 326 23 325 5.63e-82 252
MS.gene003275.t1 MTR_2g437770 44.408 304 157 6 25 327 50 342 4.22e-81 251
MS.gene003275.t1 MTR_4g031140 42.718 309 170 4 25 332 28 330 2.54e-80 248
MS.gene003275.t1 MTR_4g046713 40.979 327 189 3 1 326 3 326 4.62e-80 247
MS.gene003275.t1 MTR_7g107520 42.679 321 177 5 6 326 7 320 1.07e-78 244
MS.gene003275.t1 MTR_6g043280 42.202 327 165 7 11 326 19 332 1.88e-78 243
MS.gene003275.t1 MTR_4g114210 42.718 309 161 6 25 326 21 320 2.98e-78 243
MS.gene003275.t1 MTR_3g466180 43.709 302 161 2 25 326 31 323 7.84e-78 241
MS.gene003275.t1 MTR_1g086320 43.046 302 166 3 29 326 34 333 7.84e-78 242
MS.gene003275.t1 MTR_4g074990 43.648 307 147 4 23 326 22 305 9.02e-78 241
MS.gene003275.t1 MTR_3g467600 42.453 318 173 3 12 326 14 324 1.09e-77 241
MS.gene003275.t1 MTR_6g043240 43.260 319 165 7 25 341 42 346 2.35e-77 241
MS.gene003275.t1 MTR_1g038680 43.894 303 162 5 29 326 33 332 3.65e-77 240
MS.gene003275.t1 MTR_3g092990 40.566 318 186 2 10 326 11 326 8.30e-77 239
MS.gene003275.t1 MTR_5g022870 39.571 326 187 6 1 326 1 316 1.08e-76 238
MS.gene003275.t1 MTR_2g029880 59.716 211 73 3 137 345 9 209 1.85e-76 234
MS.gene003275.t1 MTR_1g086490 39.766 342 188 5 1 326 1 340 3.02e-76 238
MS.gene003275.t1 MTR_8g075100 42.574 303 164 7 25 326 26 319 8.09e-76 236
MS.gene003275.t1 MTR_1g025980 42.384 302 165 6 25 325 24 317 2.87e-75 235
MS.gene003275.t1 MTR_1g101830 40.728 302 173 4 25 326 27 322 5.75e-75 234
MS.gene003275.t1 MTR_1g077000 41.391 302 164 5 25 326 39 327 7.77e-75 234
MS.gene003275.t1 MTR_0155s0040 38.889 324 184 6 3 326 6 315 4.40e-73 229
MS.gene003275.t1 MTR_4g087965 40.984 305 171 6 25 323 42 343 7.97e-73 229
MS.gene003275.t1 MTR_4g074980 41.776 304 145 4 23 326 23 294 7.96e-72 225
MS.gene003275.t1 MTR_7g086820 40.196 306 174 5 21 326 16 312 2.34e-71 224
MS.gene003275.t1 MTR_3g072190 44.015 259 136 2 68 326 2 251 4.14e-71 222
MS.gene003275.t1 MTR_7g029030 41.994 331 176 9 1 326 1 320 6.23e-71 224
MS.gene003275.t1 MTR_1g090760 39.739 307 180 4 23 326 26 330 1.04e-70 224
MS.gene003275.t1 MTR_5g016010 38.066 331 196 5 1 325 1 328 1.53e-69 220
MS.gene003275.t1 MTR_4g132490 38.154 325 192 5 4 326 10 327 9.59e-69 218
MS.gene003275.t1 MTR_4g074980 46.835 237 117 2 23 256 23 253 4.89e-68 214
MS.gene003275.t1 MTR_6g043460 41.158 311 170 6 25 333 36 335 7.83e-68 217
MS.gene003275.t1 MTR_6g027440 40.123 324 183 7 4 326 1 314 1.50e-67 215
MS.gene003275.t1 MTR_4g127670 40.264 303 171 5 24 322 23 319 9.98e-66 210
MS.gene003275.t1 MTR_4g095450 39.329 328 185 6 1 322 1 320 4.60e-65 209
MS.gene003275.t1 MTR_5g074860 40.196 306 133 4 23 325 27 285 5.03e-65 207
MS.gene003275.t1 MTR_1g009750 40.717 307 172 7 25 326 27 328 8.89e-65 208
MS.gene003275.t1 MTR_3g092990 38.365 318 182 3 10 326 11 315 2.39e-64 207
MS.gene003275.t1 MTR_2g008160 38.924 316 177 8 18 326 17 323 4.69e-64 206
MS.gene003275.t1 MTR_2g008730 45.306 245 126 4 86 326 61 301 3.21e-62 201
MS.gene003275.t1 MTR_8g062780 35.737 319 201 3 10 326 8 324 4.00e-62 201
MS.gene003275.t1 MTR_2g078610 36.061 330 178 6 25 323 76 403 2.60e-61 201
MS.gene003275.t1 MTR_2g077990 36.858 331 174 7 25 323 76 403 7.62e-61 200
MS.gene003275.t1 MTR_2g067440 35.045 331 181 6 25 325 60 386 2.03e-60 199
MS.gene003275.t1 MTR_2g099175 37.134 307 181 4 25 326 36 335 3.35e-60 196
MS.gene003275.t1 MTR_5g033470 37.097 310 186 6 23 326 71 377 1.17e-59 196
MS.gene003275.t1 MTR_7g086870 36.842 304 180 5 23 326 20 311 1.55e-59 194
MS.gene003275.t1 MTR_3g105790 39.016 305 176 4 25 326 25 322 1.61e-58 192
MS.gene003275.t1 MTR_0147s0010 34.650 329 163 4 25 325 77 381 2.63e-57 190
MS.gene003275.t1 MTR_0286s0010 37.785 307 180 7 25 326 34 334 5.52e-57 188
MS.gene003275.t1 MTR_6g008075 37.785 307 180 7 25 326 34 334 5.52e-57 188
MS.gene003275.t1 MTR_2g078280 36.875 320 167 7 25 312 76 392 1.55e-56 189
MS.gene003275.t1 MTR_1g009750 37.785 307 164 8 25 326 27 311 2.11e-55 183
MS.gene003275.t1 MTR_1g066710 34.615 312 191 5 21 328 23 325 2.36e-55 184
MS.gene003275.t1 MTR_2g067450 36.721 305 183 6 25 325 11 309 4.99e-55 182
MS.gene003275.t1 MTR_1g066380 33.119 311 197 4 21 328 23 325 2.71e-50 171
MS.gene003275.t1 MTR_4g132110 33.775 302 187 5 29 326 36 328 2.99e-49 168
MS.gene003275.t1 MTR_1g066680 33.762 311 194 5 21 328 23 324 1.69e-48 166
MS.gene003275.t1 MTR_2g008160 34.177 316 157 8 18 326 17 288 1.72e-48 165
MS.gene003275.t1 MTR_1g066640 33.119 311 197 4 21 328 23 325 7.88e-48 164
MS.gene003275.t1 MTR_4g132110 33.225 307 187 6 29 326 36 333 3.62e-47 163
MS.gene003275.t1 MTR_5g074700 42.241 232 109 6 98 326 5 214 6.73e-47 158
MS.gene003275.t1 MTR_2g008160 43.860 171 92 3 20 190 19 185 1.39e-43 149
MS.gene003275.t1 MTR_7g072490 39.200 250 89 4 71 320 2 188 1.00e-42 147
MS.gene003275.t1 MTR_3g105790 39.916 238 137 3 92 326 12 246 2.97e-42 147
MS.gene003275.t1 MTR_1g066380 34.091 264 161 5 69 328 3 257 1.34e-41 146
MS.gene003275.t1 MTR_3g072210 43.750 192 99 4 136 326 55 238 1.08e-40 143
MS.gene003275.t1 MTR_3g072260 47.934 121 63 0 21 141 22 142 4.87e-34 122
MS.gene003275.t1 MTR_2g078560 32.301 226 120 4 131 325 96 319 2.15e-30 118
MS.gene003275.t1 MTR_5g058120 38.650 163 87 3 160 322 6 155 1.62e-25 103
MS.gene003275.t1 MTR_2g077980 28.364 275 155 8 87 323 11 281 6.44e-25 102
MS.gene003275.t1 MTR_2g029930 55.000 100 17 3 23 108 17 102 2.42e-24 95.9
MS.gene003275.t1 MTR_1g089005 40.310 129 70 2 15 137 5 132 1.31e-22 92.8
MS.gene003275.t1 MTR_7g086790 30.851 188 108 4 72 259 17 182 9.65e-21 89.0
MS.gene003275.t1 MTR_3g462850 37.241 145 80 6 189 326 9 149 3.46e-18 80.9
MS.gene003275.t1 MTR_1g098320 46.512 86 44 1 247 332 47 130 5.62e-18 79.7
MS.gene003275.t1 MTR_6g048160 53.521 71 29 2 64 134 22 88 1.44e-17 77.0
MS.gene003275.t1 MTR_4g114220 48.101 79 31 2 51 129 29 97 1.80e-17 78.6
MS.gene003275.t1 MTR_4g031040 30.286 175 78 3 84 258 1 131 2.54e-14 69.7
MS.gene003275.t1 MTR_5g074770 40.860 93 54 1 233 325 17 108 8.25e-14 67.4
MS.gene003275.t1 MTR_4g012865 45.588 68 37 0 25 92 77 144 8.32e-13 65.9
MS.gene003275.t1 MTR_7g086810 30.081 123 60 1 21 143 2 98 2.08e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003275.t1 AT5G06720 57.321 321 137 0 7 327 14 334 1.75e-129 374
MS.gene003275.t1 AT5G06730 55.319 329 147 0 7 335 15 343 1.68e-127 369
MS.gene003275.t1 AT2G38390 57.096 303 129 1 25 326 31 333 1.20e-123 359
MS.gene003275.t1 AT2G38380 56.106 303 132 1 25 326 31 333 1.06e-120 352
MS.gene003275.t1 AT4G08770 54.019 311 141 2 22 330 21 331 3.10e-119 348
MS.gene003275.t1 AT4G08780 53.698 311 142 2 22 330 21 331 1.35e-118 346
MS.gene003275.t1 AT3G32980 57.003 307 130 2 25 329 31 337 1.99e-118 346
MS.gene003275.t1 AT3G49120 56.678 307 131 2 25 329 32 338 2.88e-118 346
MS.gene003275.t1 AT3G49110 53.681 326 146 3 6 329 17 339 2.88e-115 338
MS.gene003275.t1 AT5G66390 49.026 308 156 1 19 326 27 333 4.04e-107 317
MS.gene003275.t1 AT2G18150 50.489 307 151 1 20 326 31 336 2.14e-106 315
MS.gene003275.t1 AT2G18140 51.325 302 146 1 25 326 35 335 7.81e-106 313
MS.gene003275.t1 AT4G36430 49.342 304 153 1 23 326 28 330 9.96e-105 310
MS.gene003275.t1 AT5G19890 50.000 322 149 5 7 326 16 327 1.17e-104 310
MS.gene003275.t1 AT1G49570 50.809 309 147 3 19 324 42 348 1.73e-104 311
MS.gene003275.t1 AT1G44970 51.148 305 149 0 22 326 42 346 3.09e-104 310
MS.gene003275.t1 AT5G19880 52.443 307 143 2 23 326 23 329 3.48e-104 309
MS.gene003275.t1 AT3G50990 49.007 302 153 1 25 326 41 341 1.15e-101 303
MS.gene003275.t1 AT5G05340 48.026 304 147 4 25 326 30 324 5.14e-93 280
MS.gene003275.t1 AT1G14550 48.185 303 149 3 25 326 26 321 5.86e-93 280
MS.gene003275.t1 AT1G14540 45.706 326 166 3 1 326 1 315 3.38e-91 275
MS.gene003275.t1 AT2G35380 50.327 306 148 3 25 326 30 335 1.75e-90 274
MS.gene003275.t1 AT1G68850 45.603 307 161 5 25 326 30 335 3.71e-87 266
MS.gene003275.t1 AT5G58390 47.541 305 148 4 25 326 21 316 7.93e-87 264
MS.gene003275.t1 AT5G58400 44.615 325 168 4 5 326 10 325 1.05e-86 264
MS.gene003275.t1 AT4G16270 44.816 299 160 4 29 326 54 348 7.04e-85 260
MS.gene003275.t1 AT3G03670 41.509 318 177 4 12 326 10 321 2.70e-82 253
MS.gene003275.t1 AT2G22420 42.345 307 162 5 25 326 23 319 5.30e-80 247
MS.gene003275.t1 AT5G15180 41.967 305 167 5 25 326 32 329 1.11e-79 246
MS.gene003275.t1 AT2G41480 44.660 309 155 7 25 326 29 328 5.62e-79 244
MS.gene003275.t1 AT4G11290 41.846 325 181 4 8 326 4 326 6.56e-79 244
MS.gene003275.t1 AT5G64120 44.631 298 157 5 29 326 39 328 6.20e-78 242
MS.gene003275.t1 AT3G01190 40.798 326 185 6 2 326 3 321 8.80e-78 241
MS.gene003275.t1 AT1G71695 43.590 312 161 7 21 329 43 342 3.31e-77 241
MS.gene003275.t1 AT5G51890 40.328 305 171 6 25 326 26 322 8.70e-76 236
MS.gene003275.t1 AT5G17820 39.871 311 175 5 16 326 15 313 2.37e-75 235
MS.gene003275.t1 AT1G05260 39.818 329 188 6 4 326 1 325 2.68e-75 235
MS.gene003275.t1 AT2G18980 41.121 321 178 5 10 326 10 323 1.09e-74 233
MS.gene003275.t1 AT4G25980 41.042 307 170 5 25 326 26 326 1.22e-74 233
MS.gene003275.t1 AT1G05240 40.789 304 166 5 29 326 30 325 4.00e-74 232
MS.gene003275.t1 AT1G05250 40.789 304 166 5 29 326 30 325 4.00e-74 232
MS.gene003275.t1 AT5G42180 40.312 320 182 6 7 325 5 316 7.88e-74 231
MS.gene003275.t1 AT5G17820 39.871 311 175 5 16 326 68 366 1.05e-73 232
MS.gene003275.t1 AT4G37530 42.345 307 172 3 23 326 25 329 8.78e-73 229
MS.gene003275.t1 AT5G39580 44.371 302 153 7 29 326 29 319 2.60e-72 227
MS.gene003275.t1 AT3G21770 40.777 309 177 5 17 323 21 325 4.88e-72 227
MS.gene003275.t1 AT4G33420 40.379 317 170 6 16 326 22 325 1.41e-70 223
MS.gene003275.t1 AT1G30870 40.260 308 171 6 25 329 51 348 1.75e-70 224
MS.gene003275.t1 AT4G33420 40.379 317 170 6 16 326 69 372 7.13e-70 223
MS.gene003275.t1 AT5G64100 40.864 301 165 6 29 326 41 331 1.17e-69 221
MS.gene003275.t1 AT5G67400 39.818 329 189 6 3 326 5 329 3.82e-69 219
MS.gene003275.t1 AT5G64110 43.377 302 158 7 29 326 38 330 5.05e-69 219
MS.gene003275.t1 AT4G30170 39.935 308 174 5 23 326 25 325 5.41e-69 219
MS.gene003275.t1 AT3G49960 38.462 325 193 4 6 326 8 329 1.41e-68 218
MS.gene003275.t1 AT4G33870 36.119 335 176 5 24 323 67 398 6.28e-68 219
MS.gene003275.t1 AT2G35380 49.393 247 121 3 84 326 1 247 9.34e-68 213
MS.gene003275.t1 AT2G34060 40.656 305 172 6 25 323 42 343 7.26e-67 214
MS.gene003275.t1 AT2G39040 40.836 311 173 7 23 326 44 350 4.48e-66 212
MS.gene003275.t1 AT4G37520 39.088 307 182 3 23 326 25 329 1.15e-65 211
MS.gene003275.t1 AT5G14130 39.032 310 174 7 23 326 30 330 3.12e-65 209
MS.gene003275.t1 AT5G14130 39.286 308 172 7 25 326 73 371 6.62e-65 210
MS.gene003275.t1 AT4G37520 38.762 307 180 4 23 326 25 326 1.95e-64 207
MS.gene003275.t1 AT3G28200 38.235 306 175 5 25 326 21 316 4.33e-64 206
MS.gene003275.t1 AT1G77100 40.575 313 168 8 21 326 18 319 9.20e-64 205
MS.gene003275.t1 AT4G37530 43.529 255 141 2 23 274 25 279 2.78e-63 203
MS.gene003275.t1 AT5G24070 38.944 303 172 6 31 328 43 337 3.14e-63 204
MS.gene003275.t1 AT5G40150 38.188 309 182 4 20 326 27 328 9.45e-63 203
MS.gene003275.t1 AT4G26010 37.037 324 188 6 4 326 1 309 5.53e-62 200
MS.gene003275.t1 AT1G24110 36.393 305 187 5 25 326 22 322 7.25e-62 201
MS.gene003275.t1 AT4G26010 37.037 324 188 6 4 326 29 337 9.91e-62 201
MS.gene003275.t1 AT4G17690 37.049 305 181 5 25 326 26 322 6.47e-61 198
MS.gene003275.t1 AT5G22410 36.760 321 189 8 7 322 10 321 1.43e-60 197
MS.gene003275.t1 AT2G24800 40.196 306 172 5 25 326 31 329 4.80e-60 196
MS.gene003275.t1 AT5G47000 33.951 324 204 5 6 326 14 330 1.08e-59 195
MS.gene003275.t1 AT4G31760 38.636 308 173 6 25 326 29 326 1.69e-59 194
MS.gene003275.t1 AT2G43480 39.643 280 156 6 52 326 64 335 3.27e-58 191
MS.gene003275.t1 AT1G34510 34.769 325 194 7 4 326 1 309 1.06e-55 184
MS.gene003275.t1 AT3G17070 35.952 331 192 9 8 326 17 339 4.39e-53 178
MS.gene003275.t1 AT4G21960 32.537 335 208 7 2 328 5 329 1.31e-49 169
MS.gene003275.t1 AT2G37130 33.121 314 198 5 17 326 22 327 4.36e-48 165
MS.gene003275.t1 AT4G25980 45.882 170 88 3 25 194 71 236 3.20e-46 159
MS.gene003275.t1 AT2G37130 33.113 302 190 5 29 326 3 296 6.63e-46 158
MS.gene003275.t1 AT3G17070 34.752 282 167 9 53 326 4 276 1.07e-38 139
MS.gene003275.t1 AT5G39580 41.748 206 105 5 29 227 29 226 6.66e-38 135
MS.gene003275.t1 AT2G24800 43.931 173 87 3 25 194 31 196 1.72e-33 124
MS.gene003275.t1 AT1G77490 26.394 269 148 11 59 310 106 341 3.18e-16 79.7
MS.gene003275.t1 AT1G77490 26.394 269 148 11 59 310 106 341 4.83e-16 79.3
MS.gene003275.t1 AT4G08390 25.830 271 147 11 59 310 127 362 2.96e-14 73.6
MS.gene003275.t1 AT4G08390 25.830 271 147 11 59 310 127 362 2.96e-14 73.6
MS.gene003275.t1 AT4G08390 25.830 271 147 11 59 310 127 362 2.96e-14 73.6
MS.gene003275.t1 AT4G08390 25.830 271 147 11 59 310 126 361 3.42e-14 73.2
MS.gene003275.t1 AT4G32320 26.523 279 149 10 36 309 96 323 4.61e-13 69.7

Find 84 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGAAGTATCTTCTATTT+TGG 0.206832 2.4:-60156251 MS.gene003275:intron
GGTTGTTTCCTGTTGAGTTT+TGG 0.220863 2.4:+60154340 None:intergenic
TTCCAAACAGAAACTCATTA+AGG 0.226113 2.4:-60156360 MS.gene003275:CDS
AGGAAACAACCTAGCCAATT+TGG 0.278951 2.4:-60154328 MS.gene003275:CDS
TAGTGTGTCGATGATTAAAA+TGG 0.281981 2.4:-60154142 MS.gene003275:CDS
GATGAGACTGGCACCGATTC+GGG 0.301159 2.4:+60157043 None:intergenic
CCCCTTAATGAGTTTCTGTT+TGG 0.309457 2.4:+60156358 None:intergenic
CTGGTGATGAAGGGGAAATT+AGG 0.315180 2.4:-60154101 MS.gene003275:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.4:+60157086 None:intergenic
AATTCTGAAAGAAGAGAGTT+TGG 0.333317 2.4:+60154166 None:intergenic
CAGAAACTCATTAAGGGGTT+TGG 0.333622 2.4:-60156353 MS.gene003275:CDS
AAAGCTTCATTTCTTGTTCA+AGG 0.342588 2.4:-60155274 MS.gene003275:CDS
TCCCTTCTTCCCAATGGAAT+TGG 0.355749 2.4:+60155367 None:intergenic
GGTTCCATGCGTGTTGTACT+AGG 0.361248 2.4:-60157197 MS.gene003275:CDS
ATGATTAAAATGGCGAATAT+TGG 0.365590 2.4:-60154132 MS.gene003275:CDS
TTTGTAAATGGTAACTCCTC+TGG 0.366528 2.4:-60154066 MS.gene003275:CDS
TGGTGTAGTACGGTCCAAAT+TGG 0.380399 2.4:+60154314 None:intergenic
TATTTGTTATCAAAGTGATT+TGG 0.394778 2.4:+60154294 None:intergenic
TCCAAACAGAAACTCATTAA+GGG 0.412491 2.4:-60156359 MS.gene003275:CDS
GCGAATATTGGAGTGTTAAC+TGG 0.413231 2.4:-60154120 MS.gene003275:CDS
CTTGCAAATCAAAATCTTCC+CGG 0.414017 2.4:-60155322 MS.gene003275:CDS
TACTTAGGTGCTCATACATT+CGG 0.419343 2.4:-60154474 MS.gene003275:intron
TGATGAGACTGGCACCGATT+CGG 0.427794 2.4:+60157042 None:intergenic
ATGGCAATGGTATCTGCATT+AGG 0.433475 2.4:+60154210 None:intergenic
TCCCTCATGGCCAATTCCAT+TGG 0.444960 2.4:-60155377 MS.gene003275:CDS
GTTGTGTTTAGTGTTGGATC+AGG 0.445757 2.4:+60154393 None:intergenic
ATATGTCCCCAAAACTCAAC+AGG 0.446009 2.4:-60154348 MS.gene003275:CDS
CCCTCATGGCCAATTCCATT+GGG 0.446682 2.4:-60155376 MS.gene003275:CDS
ATATGACTCTAAACACAATA+GGG 0.454551 2.4:+60157087 None:intergenic
TCCCTCACTGATCCCCGAAT+CGG 0.454674 2.4:-60157056 MS.gene003275:CDS
GAATCGGTGCCAGTCTCATC+AGG 0.463560 2.4:-60157040 MS.gene003275:CDS
TCCAATCTTCAAAACCTCAA+TGG 0.466595 2.4:-60154267 MS.gene003275:CDS
GGCCAATTCCATTGGGAAGA+AGG 0.467383 2.4:-60155369 MS.gene003275:CDS
TCAGCACAAGAAACAGTGTT+AGG 0.474603 2.4:+60156289 None:intergenic
TTTGTGATGCATGGAGGGTA+TGG 0.479593 2.4:-60157155 MS.gene003275:CDS
CACTTCGAAGTAAGCCATTG+AGG 0.486340 2.4:+60154253 None:intergenic
CTATACAATTTCAGTGGCAC+TGG 0.489654 2.4:-60154420 MS.gene003275:CDS
TCCCGGACCCTTCTCTACAT+TGG 0.490937 2.4:-60155305 MS.gene003275:CDS
TGGTGTGCATTTGTGATGCA+TGG 0.501927 2.4:-60157164 MS.gene003275:CDS
CAAAGTGATTTGGTGTAGTA+CGG 0.503691 2.4:+60154304 None:intergenic
ATCCAATGTAGAGAAGGGTC+CGG 0.504853 2.4:+60155303 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.4:-60155241 MS.gene003275:intron
GGAGTGTTAACTGGTGATGA+AGG 0.514476 2.4:-60154111 MS.gene003275:CDS
AACACAATAGGGTATAGATC+TGG 0.518782 2.4:+60157098 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.4:-60157081 MS.gene003275:CDS
ATTTGCAAGAGTTATGTTTG+CGG 0.522007 2.4:+60155336 None:intergenic
TCCAATGTAGAGAAGGGTCC+GGG 0.526068 2.4:+60155304 None:intergenic
GCCAATTCCATTGGGAAGAA+GGG 0.526946 2.4:-60155368 MS.gene003275:CDS
CCCAATGGAATTGGCCATGA+GGG 0.531181 2.4:+60155376 None:intergenic
AGAAGATACTTCAGCAGCAA+TGG 0.536212 2.4:+60156258 None:intergenic
AAGTAAGTTGTGTTTAGTGT+TGG 0.540670 2.4:+60154387 None:intergenic
TGATGCATGGAGGGTATGGT+TGG 0.543555 2.4:-60157151 MS.gene003275:CDS
CATGCGTGTTGTACTAGGGT+TGG 0.550754 2.4:-60157192 MS.gene003275:CDS
AAGCTATCCCTTCTTCCCAA+TGG 0.554508 2.4:+60155361 None:intergenic
TTGTACTAGGGTTGGCACTT+TGG 0.555400 2.4:-60157184 MS.gene003275:CDS
AAGTTGATCCAATGTAGAGA+AGG 0.557740 2.4:+60155297 None:intergenic
TGATACAATTGTAAGTGAGC+AGG 0.559900 2.4:-60156389 MS.gene003275:CDS
CATGTTTCACTGTAGAATGA+TGG 0.560211 2.4:+60157122 None:intergenic
CCAAACAGAAACTCATTAAG+GGG 0.561754 2.4:-60156358 MS.gene003275:CDS
TTGATCTATGAACAGGGAGG+AGG 0.566092 2.4:-60155400 MS.gene003275:intron
AAAGCTATTAACAATGGCAA+TGG 0.569604 2.4:+60154197 None:intergenic
GCTCGTGGTGGATCAAAAGA+TGG 0.571292 2.4:-60154039 MS.gene003275:CDS
TGTTTGTGACAGGGCTGCGA+TGG 0.571388 2.4:-60156433 MS.gene003275:intron
ACCGATTCGGGGATCAGTGA+GGG 0.574096 2.4:+60157055 None:intergenic
AGTTGATCCAATGTAGAGAA+GGG 0.578999 2.4:+60155298 None:intergenic
TCTGCTAAAGCTATTAACAA+TGG 0.580549 2.4:+60154191 None:intergenic
GTGCATTTGTGATGCATGGA+GGG 0.581824 2.4:-60157160 MS.gene003275:CDS
TGCCACTGAAATTGTATAGA+CGG 0.584385 2.4:+60154424 None:intergenic
TCCTCTGGATTAGCTCGTGG+TGG 0.586455 2.4:-60154051 MS.gene003275:CDS
GTTCCATGCGTGTTGTACTA+GGG 0.589091 2.4:-60157196 MS.gene003275:CDS
AAAATGAAGCCTGATGAGAC+TGG 0.590570 2.4:+60157031 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.4:-60155390 MS.gene003275:intron
TAGTACGGTCCAAATTGGCT+AGG 0.596551 2.4:+60154319 None:intergenic
AACTCCTCTGGATTAGCTCG+TGG 0.601383 2.4:-60154054 MS.gene003275:CDS
GAGTGTTAACTGGTGATGAA+GGG 0.609584 2.4:-60154110 MS.gene003275:CDS
ATGAGACTGGCACCGATTCG+GGG 0.630611 2.4:+60157044 None:intergenic
AACCGTCTATACAATTTCAG+TGG 0.634780 2.4:-60154426 MS.gene003275:CDS
CAACCCTAGTACAACACGCA+TGG 0.644628 2.4:+60157193 None:intergenic
TGTGCATTTGTGATGCATGG+AGG 0.652684 2.4:-60157161 MS.gene003275:CDS
AGTGTTAACTGGTGATGAAG+GGG 0.656296 2.4:-60154109 MS.gene003275:CDS
CACCGATTCGGGGATCAGTG+AGG 0.657501 2.4:+60157054 None:intergenic
TCCCAATGGAATTGGCCATG+AGG 0.657766 2.4:+60155375 None:intergenic
AATGGTATCTGCATTAGGAG+TGG 0.670287 2.4:+60154215 None:intergenic
TCCACCACGAGCTAATCCAG+AGG 0.739992 2.4:+60154050 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAGAAATTATTTATA+TGG + chr2.4:60154265-60154284 None:intergenic 10.0%
!! ATTTAAATAAAAAACTAACA+TGG - chr2.4:60154704-60154723 MS.gene003275:intron 10.0%
!!! CATAGAAAATAAATTATTTT+AGG + chr2.4:60155700-60155719 None:intergenic 10.0%
!!! TAAATAATAGTTTTTTCTAA+TGG + chr2.4:60155480-60155499 None:intergenic 10.0%
!!! TAATGTTTTGTTTTTATATT+AGG - chr2.4:60155057-60155076 MS.gene003275:intron 10.0%
!! AAAATATACTATAAGTACAA+GGG - chr2.4:60154743-60154762 MS.gene003275:intron 15.0%
!! ACCTAAGTATAAAAAAAAAA+AGG + chr2.4:60156735-60156754 None:intergenic 15.0%
!! AGTATAAAAAAAAAAAGGTT+AGG + chr2.4:60156730-60156749 None:intergenic 15.0%
!!! AAATTATTTTAGGTATTGAT+AGG + chr2.4:60155690-60155709 None:intergenic 15.0%
!!! ACCTTTTTTTTTTTATACTT+AGG - chr2.4:60156731-60156750 MS.gene003275:intron 15.0%
!!! ATAATTTTATCCATATAACT+AGG + chr2.4:60155027-60155046 None:intergenic 15.0%
!!! ATGACAAGATTTTAATTATT+GGG - chr2.4:60154642-60154661 MS.gene003275:intron 15.0%
!!! GGTTAATTACATTTTTTTTA+AGG + chr2.4:60156709-60156728 None:intergenic 15.0%
!!! TAAATCTTTATTTTGTTTGT+AGG + chr2.4:60154557-60154576 None:intergenic 15.0%
!!! TAGAAAACTTGATTTTAAAA+TGG - chr2.4:60156351-60156370 MS.gene003275:CDS 15.0%
!!! TTTTTTATTACCTAGTTATA+TGG - chr2.4:60155014-60155033 MS.gene003275:intron 15.0%
!! AAAAATGAATGTCCTTATAT+TGG - chr2.4:60154484-60154503 MS.gene003275:intron 20.0%
!! AAAATGAATGTCCTTATATT+GGG - chr2.4:60154485-60154504 MS.gene003275:intron 20.0%
!! CAAAATATACTATAAGTACA+AGG - chr2.4:60154742-60154761 MS.gene003275:intron 20.0%
!! TACATAATATAAGCAATGTT+CGG - chr2.4:60156445-60156464 MS.gene003275:intron 20.0%
!! TCAAAAAAGTAAGTTTGTAT+TGG + chr2.4:60155213-60155232 None:intergenic 20.0%
!! TTAGAGTTCGAAAAATATTT+AGG + chr2.4:60156596-60156615 None:intergenic 20.0%
!! TTTCTCTTCAAATTACAATT+GGG - chr2.4:60156232-60156251 MS.gene003275:intron 20.0%
!!! ATGGACCAAAATTTTTAAAA+AGG - chr2.4:60156537-60156556 MS.gene003275:intron 20.0%
!!! GATGACAAGATTTTAATTAT+TGG - chr2.4:60154641-60154660 MS.gene003275:intron 20.0%
!!! GTTTGCCTTTTTAAAAATTT+TGG + chr2.4:60156545-60156564 None:intergenic 20.0%
!!! TATTCCTTTTCTTTTTCTTT+TGG + chr2.4:60155636-60155655 None:intergenic 20.0%
!!! TATTTGTTATCAAAGTGATT+TGG + chr2.4:60156929-60156948 None:intergenic 20.0%
!!! TTGCAATGTAATTTTGTAAA+TGG - chr2.4:60157142-60157161 MS.gene003275:CDS 20.0%
!!! TTGGAACTTTATTTTATGAA+TGG + chr2.4:60155194-60155213 None:intergenic 20.0%
!!! TTTCTTTGAAATTGAACATA+TGG - chr2.4:60154319-60154338 MS.gene003275:CDS 20.0%
!!! TTTTCTTCTTCTTTTTTTAG+AGG - chr2.4:60154460-60154479 MS.gene003275:CDS 20.0%
!!! TTTTTAGTGGTATTCAATAA+CGG - chr2.4:60154518-60154537 MS.gene003275:intron 20.0%
! AAGTGAAAGAGATAAAAGAA+GGG + chr2.4:60155340-60155359 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2.4:60154137-60154156 None:intergenic 25.0%
! ACATAATATAAGCAATGTTC+GGG - chr2.4:60156446-60156465 MS.gene003275:intron 25.0%
! ACTTACCAATACATTCTAAA+AGG - chr2.4:60155160-60155179 MS.gene003275:intron 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.4:60154136-60154155 None:intergenic 25.0%
! ATCATAGCTCAAACTTTATA+TGG - chr2.4:60155744-60155763 MS.gene003275:intron 25.0%
! ATGATTAAAATGGCGAATAT+TGG - chr2.4:60157088-60157107 MS.gene003275:CDS 25.0%
! ATGTATATTGATCTATGAAC+AGG - chr2.4:60155813-60155832 MS.gene003275:intron 25.0%
! ATTTCTAACTTTCTTACACT+AGG - chr2.4:60154273-60154292 MS.gene003275:CDS 25.0%
! ATTTGTTCGCGTAAAAAATA+TGG + chr2.4:60156185-60156204 None:intergenic 25.0%
! CATAGATCAATATACATTAG+AGG + chr2.4:60155810-60155829 None:intergenic 25.0%
! CTTTCTCTTCAAATTACAAT+TGG - chr2.4:60156231-60156250 MS.gene003275:intron 25.0%
! GTAACCAAAAGAAAAAGAAA+AGG - chr2.4:60155629-60155648 MS.gene003275:intron 25.0%
! TATAGGTGTGATAAAATAGA+GGG - chr2.4:60156385-60156404 MS.gene003275:CDS 25.0%
! TCAATTTCAAAGAAAGAAGT+AGG + chr2.4:60154314-60154333 None:intergenic 25.0%
! TCTCATGATTTCTTTCTATT+TGG - chr2.4:60155425-60155444 MS.gene003275:intron 25.0%
! TCTTTGCCTAAAATGATTAT+AGG - chr2.4:60154366-60154385 MS.gene003275:CDS 25.0%
! TGTATATTGATCTATGAACA+GGG - chr2.4:60155814-60155833 MS.gene003275:intron 25.0%
! TTATAGGTGTGATAAAATAG+AGG - chr2.4:60156384-60156403 MS.gene003275:CDS 25.0%
!! ATCGAACCTATAATCATTTT+AGG + chr2.4:60154375-60154394 None:intergenic 25.0%
!! ATGGTGTATTGAGATTATTT+TGG + chr2.4:60155139-60155158 None:intergenic 25.0%
!! TAATTCAATAAGTTGACGTT+GGG + chr2.4:60154621-60154640 None:intergenic 25.0%
!!! AAATGGAGACTACTTTTTAT+AGG - chr2.4:60156368-60156387 MS.gene003275:CDS 25.0%
!!! TTATTTTGTTTGTAGGTCAT+TGG + chr2.4:60154550-60154569 None:intergenic 25.0%
!!! TTTTAATGAAGCTTTGTTGT+TGG + chr2.4:60156040-60156059 None:intergenic 25.0%
AAAGCTATTAACAATGGCAA+TGG + chr2.4:60157026-60157045 None:intergenic 30.0%
AAAGCTTCATTTCTTGTTCA+AGG - chr2.4:60155946-60155965 MS.gene003275:intron 30.0%
AAGGGATAAAACATTTGTCT+TGG + chr2.4:60155322-60155341 None:intergenic 30.0%
AAGTAAGTTGTGTTTAGTGT+TGG + chr2.4:60156836-60156855 None:intergenic 30.0%
ACCACCACAAAAAAAATAGA+TGG - chr2.4:60156481-60156500 MS.gene003275:intron 30.0%
ATCTTTATGAGCCCAATATA+AGG + chr2.4:60154499-60154518 None:intergenic 30.0%
ATTTGCAAGAGTTATGTTTG+CGG + chr2.4:60155887-60155906 None:intergenic 30.0%
CACCACAAAAAAAATAGATG+GGG - chr2.4:60156483-60156502 MS.gene003275:intron 30.0%
CATAATATAAGCAATGTTCG+GGG - chr2.4:60156447-60156466 MS.gene003275:intron 30.0%
CCACCACAAAAAAAAATAGA+TGG - chr2.4:60156518-60156537 MS.gene003275:intron 30.0%
CCACCACAAAAAAAATAGAT+GGG - chr2.4:60156482-60156501 MS.gene003275:intron 30.0%
GAAGTGAAAGAGATAAAAGA+AGG + chr2.4:60155341-60155360 None:intergenic 30.0%
TCCAAACAGAAACTCATTAA+GGG - chr2.4:60154861-60154880 MS.gene003275:intron 30.0%
TCTGCTAAAGCTATTAACAA+TGG + chr2.4:60157032-60157051 None:intergenic 30.0%
TTCCAAACAGAAACTCATTA+AGG - chr2.4:60154860-60154879 MS.gene003275:intron 30.0%
TTGTGTAATATTTGTGTGTG+AGG + chr2.4:60156666-60156685 None:intergenic 30.0%
! AATTCTGAAAGAAGAGAGTT+TGG + chr2.4:60157057-60157076 None:intergenic 30.0%
! ACCAATACATTCTAAAAGGT+TGG - chr2.4:60155164-60155183 MS.gene003275:intron 30.0%
! CTAATTCAATAAGTTGACGT+TGG + chr2.4:60154622-60154641 None:intergenic 30.0%
! TACATTAGAGGACTTTAAGA+TGG + chr2.4:60155798-60155817 None:intergenic 30.0%
! TAGAATGTATTGGTAAGTGA+TGG + chr2.4:60155158-60155177 None:intergenic 30.0%
! TAGTGTGTCGATGATTAAAA+TGG - chr2.4:60157078-60157097 MS.gene003275:CDS 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.4:60154139-60154158 MS.gene003275:CDS 30.0%
! TTTAAGATGGACATTTGAGA+AGG + chr2.4:60155785-60155804 None:intergenic 30.0%
! TTTTGATCCCTCAATTATCA+CGG - chr2.4:60156137-60156156 MS.gene003275:intron 30.0%
!! TGCTGAAGTATCTTCTATTT+TGG - chr2.4:60154969-60154988 MS.gene003275:intron 30.0%
!! TTTTGGTGGATAGAGTATTT+TGG + chr2.4:60155122-60155141 None:intergenic 30.0%
!!! AACCCCATCTATTTTTTTTG+TGG + chr2.4:60156488-60156507 None:intergenic 30.0%
!!! ATTTTTTTTTGTGGTGGTCA+GGG + chr2.4:60156515-60156534 None:intergenic 30.0%
!!! CCATCTATTTTTTTTTGTGG+TGG + chr2.4:60156521-60156540 None:intergenic 30.0%
!!! GATGATTTTTTGCCCAAAAA+CGG + chr2.4:60156269-60156288 None:intergenic 30.0%
!!! GGTCCATCTATTTTTTTTTG+TGG + chr2.4:60156524-60156543 None:intergenic 30.0%
!!! GTGTATTGAGATTATTTTGG+TGG + chr2.4:60155136-60155155 None:intergenic 30.0%
!!! TATTTTTTTTGTGGTGGTCA+GGG + chr2.4:60156479-60156498 None:intergenic 30.0%
!!! TATTTTTTTTTGTGGTGGTC+AGG + chr2.4:60156516-60156535 None:intergenic 30.0%
AAATCATGAGACCACAAAAC+CGG + chr2.4:60155416-60155435 None:intergenic 35.0%
AACACAATAGGGTATAGATC+TGG + chr2.4:60154125-60154144 None:intergenic 35.0%
AACCGTCTATACAATTTCAG+TGG - chr2.4:60156794-60156813 MS.gene003275:intron 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.4:60155979-60155998 MS.gene003275:intron 35.0%
AGTTGATCCAATGTAGAGAA+GGG + chr2.4:60155925-60155944 None:intergenic 35.0%
ATATTGATCTATGAACAGGG+AGG - chr2.4:60155817-60155836 MS.gene003275:intron 35.0%
CATGTTTCACTGTAGAATGA+TGG + chr2.4:60154101-60154120 None:intergenic 35.0%
CCAAACAGAAACTCATTAAG+GGG - chr2.4:60154862-60154881 MS.gene003275:intron 35.0%
CTTCTCAAATAGACGAATTG+AGG + chr2.4:60154403-60154422 None:intergenic 35.0%
CTTGCAAATCAAAATCTTCC+CGG - chr2.4:60155898-60155917 MS.gene003275:intron 35.0%
GAAGTAGGTTGTAATTGCAA+AGG + chr2.4:60154299-60154318 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.4:60154778-60154797 MS.gene003275:intron 35.0%
TACTTAGGTGCTCATACATT+CGG - chr2.4:60156746-60156765 MS.gene003275:intron 35.0%
TCCAATCTTCAAAACCTCAA+TGG - chr2.4:60156953-60156972 MS.gene003275:intron 35.0%
TGATACAATTGTAAGTGAGC+AGG - chr2.4:60154831-60154850 MS.gene003275:intron 35.0%
TGCCACTGAAATTGTATAGA+CGG + chr2.4:60156799-60156818 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.4:60154777-60154796 MS.gene003275:intron 35.0%
TTTGTAAATGGTAACTCCTC+TGG - chr2.4:60157154-60157173 MS.gene003275:CDS 35.0%
! AAGTTGATCCAATGTAGAGA+AGG + chr2.4:60155926-60155945 None:intergenic 35.0%
! CGCGAACAAATTGTGATTTT+TGG - chr2.4:60156194-60156213 MS.gene003275:intron 35.0%
! TATCACGGTTGTTGCAATTT+TGG - chr2.4:60156152-60156171 MS.gene003275:intron 35.0%
! TTGTTTCCTGTTGAGTTTTG+GGG + chr2.4:60156881-60156900 None:intergenic 35.0%
!! CAAAGTGATTTGGTGTAGTA+CGG + chr2.4:60156919-60156938 None:intergenic 35.0%
!! GATAGCAAATCACCGTTTTT+GGG - chr2.4:60156254-60156273 MS.gene003275:CDS 35.0%
!! GGGCTCATAAAGATTTTTAG+TGG - chr2.4:60154505-60154524 MS.gene003275:intron 35.0%
!! GTTGTTTCCTGTTGAGTTTT+GGG + chr2.4:60156882-60156901 None:intergenic 35.0%
!!! CCCATCTATTTTTTTTGTGG+TGG + chr2.4:60156485-60156504 None:intergenic 35.0%
!!! CTATTTTTTTTGTGGTGGTC+AGG + chr2.4:60156480-60156499 None:intergenic 35.0%
!!! GCCAACCTTTTAGAATGTAT+TGG + chr2.4:60155168-60155187 None:intergenic 35.0%
!!! GTGATTTTTGGCTCGAAAAA+TGG - chr2.4:60156206-60156225 MS.gene003275:intron 35.0%
AAAATGAAGCCTGATGAGAC+TGG + chr2.4:60154192-60154211 None:intergenic 40.0%
AATGGTATCTGCATTAGGAG+TGG + chr2.4:60157008-60157027 None:intergenic 40.0%
AGAAGATACTTCAGCAGCAA+TGG + chr2.4:60154965-60154984 None:intergenic 40.0%
AGGAAACAACCTAGCCAATT+TGG - chr2.4:60156892-60156911 MS.gene003275:intron 40.0%
ATATGTCCCCAAAACTCAAC+AGG - chr2.4:60156872-60156891 MS.gene003275:intron 40.0%
ATGGCAATGGTATCTGCATT+AGG + chr2.4:60157013-60157032 None:intergenic 40.0%
CAGAAACTCATTAAGGGGTT+TGG - chr2.4:60154867-60154886 MS.gene003275:intron 40.0%
CATCGTGAACTTAACTCAGT+TGG - chr2.4:60156413-60156432 MS.gene003275:CDS 40.0%
CCCCTTAATGAGTTTCTGTT+TGG + chr2.4:60154865-60154884 None:intergenic 40.0%
CTATACAATTTCAGTGGCAC+TGG - chr2.4:60156800-60156819 MS.gene003275:intron 40.0%
CTGAGTTAAGTTCACGATGA+CGG + chr2.4:60156412-60156431 None:intergenic 40.0%
GCAACAACCGTGATAATTGA+GGG + chr2.4:60156147-60156166 None:intergenic 40.0%
GTGAACTTAACTCAGTTGGT+AGG - chr2.4:60156417-60156436 MS.gene003275:CDS 40.0%
GTGTGTGAGGTTAATTACGA+AGG + chr2.4:60156653-60156672 None:intergenic 40.0%
TCAGCACAAGAAACAGTGTT+AGG + chr2.4:60154934-60154953 None:intergenic 40.0%
TGCAACAACCGTGATAATTG+AGG + chr2.4:60156148-60156167 None:intergenic 40.0%
! AGTGTTAACTGGTGATGAAG+GGG - chr2.4:60157111-60157130 MS.gene003275:CDS 40.0%
! GAGTGTTAACTGGTGATGAA+GGG - chr2.4:60157110-60157129 MS.gene003275:CDS 40.0%
! GCGAATATTGGAGTGTTAAC+TGG - chr2.4:60157100-60157119 MS.gene003275:CDS 40.0%
! GGATAGCAAATCACCGTTTT+TGG - chr2.4:60156253-60156272 MS.gene003275:CDS 40.0%
! GTTGTGTTTAGTGTTGGATC+AGG + chr2.4:60156830-60156849 None:intergenic 40.0%
!! CTTGTTGTTGAGTTGACAGA+AGG + chr2.4:60155393-60155412 None:intergenic 40.0%
!! GGTTGTTTCCTGTTGAGTTT+TGG + chr2.4:60156883-60156902 None:intergenic 40.0%
!!! GCCATTGAGGTTTTGAAGAT+TGG + chr2.4:60156957-60156976 None:intergenic 40.0%
AAGCTATCCCTTCTTCCCAA+TGG + chr2.4:60155862-60155881 None:intergenic 45.0%
ATCCAATGTAGAGAAGGGTC+CGG + chr2.4:60155920-60155939 None:intergenic 45.0%
CACTTCGAAGTAAGCCATTG+AGG + chr2.4:60156970-60156989 None:intergenic 45.0%
CTGTCAACTCAACAACAAGC+CGG - chr2.4:60155394-60155413 MS.gene003275:intron 45.0%
GCCAATTCCATTGGGAAGAA+GGG - chr2.4:60155852-60155871 MS.gene003275:intron 45.0%
GTGCATTTGTGATGCATGGA+GGG - chr2.4:60154060-60154079 MS.gene003275:CDS 45.0%
GTTCCATGCGTGTTGTACTA+GGG - chr2.4:60154024-60154043 MS.gene003275:CDS 45.0%
TAGTACGGTCCAAATTGGCT+AGG + chr2.4:60156904-60156923 None:intergenic 45.0%
TCCCTTCTTCCCAATGGAAT+TGG + chr2.4:60155856-60155875 None:intergenic 45.0%
TGCATCTTGCGGAGGAAATT+GGG + chr2.4:60155296-60155315 None:intergenic 45.0%
TGGTGTAGTACGGTCCAAAT+TGG + chr2.4:60156909-60156928 None:intergenic 45.0%
TGGTGTGCATTTGTGATGCA+TGG - chr2.4:60154056-60154075 MS.gene003275:CDS 45.0%
TGTGCATTTGTGATGCATGG+AGG - chr2.4:60154059-60154078 MS.gene003275:CDS 45.0%
TTGATCTATGAACAGGGAGG+AGG - chr2.4:60155820-60155839 MS.gene003275:intron 45.0%
TTTGTGATGCATGGAGGGTA+TGG - chr2.4:60154065-60154084 MS.gene003275:CDS 45.0%
! CTGGTGATGAAGGGGAAATT+AGG - chr2.4:60157119-60157138 MS.gene003275:CDS 45.0%
! GGAGTGTTAACTGGTGATGA+AGG - chr2.4:60157109-60157128 MS.gene003275:CDS 45.0%
! TGTCTTGGAAGTGCATCTTG+CGG + chr2.4:60155307-60155326 None:intergenic 45.0%
! TTGTACTAGGGTTGGCACTT+TGG - chr2.4:60154036-60154055 MS.gene003275:CDS 45.0%
!! GAGTTGACAGAAGGTGTTGT+GGG + chr2.4:60155384-60155403 None:intergenic 45.0%
!! TCAACAACAAGCCGGTTTTG+TGG - chr2.4:60155402-60155421 MS.gene003275:intron 45.0%
!! TGAGTTGACAGAAGGTGTTG+TGG + chr2.4:60155385-60155404 None:intergenic 45.0%
!! AAAAACTTATAAAATAAATA+AGG - chr2.4:60155266-60155285 MS.gene003275:CDS 5.0%
CAACCCTAGTACAACACGCA+TGG + chr2.4:60154030-60154049 None:intergenic 50.0%
CATGCGTGTTGTACTAGGGT+TGG - chr2.4:60154028-60154047 MS.gene003275:CDS 50.0%
CCCAATGGAATTGGCCATGA+GGG + chr2.4:60155847-60155866 None:intergenic 50.0%
CCCTCATGGCCAATTCCATT+GGG - chr2.4:60155844-60155863 MS.gene003275:intron 50.0%
GGCCAATTCCATTGGGAAGA+AGG - chr2.4:60155851-60155870 MS.gene003275:intron 50.0%
GGTTCCATGCGTGTTGTACT+AGG - chr2.4:60154023-60154042 MS.gene003275:CDS 50.0%
GTGCATCTTGCGGAGGAAAT+TGG + chr2.4:60155297-60155316 None:intergenic 50.0%
TCCAATGTAGAGAAGGGTCC+GGG + chr2.4:60155919-60155938 None:intergenic 50.0%
TCCCAATGGAATTGGCCATG+AGG + chr2.4:60155848-60155867 None:intergenic 50.0%
TCCCTCATGGCCAATTCCAT+TGG - chr2.4:60155843-60155862 MS.gene003275:intron 50.0%
! TGATGCATGGAGGGTATGGT+TGG - chr2.4:60154069-60154088 MS.gene003275:CDS 50.0%
!! AACTCCTCTGGATTAGCTCG+TGG - chr2.4:60157166-60157185 MS.gene003275:CDS 50.0%
!! GCTCGTGGTGGATCAAAAGA+TGG - chr2.4:60157181-60157200 MS.gene003275:CDS 50.0%
!! TGATGAGACTGGCACCGATT+CGG + chr2.4:60154181-60154200 None:intergenic 50.0%
TCCACCACGAGCTAATCCAG+AGG + chr2.4:60157173-60157192 None:intergenic 55.0%
TCCCGGACCCTTCTCTACAT+TGG - chr2.4:60155915-60155934 MS.gene003275:intron 55.0%
TCCCTCACTGATCCCCGAAT+CGG - chr2.4:60154164-60154183 MS.gene003275:CDS 55.0%
TGTTTGTGACAGGGCTGCGA+TGG - chr2.4:60154787-60154806 MS.gene003275:intron 55.0%
! CTTGGAAGTGCATCTTGCGG+AGG + chr2.4:60155304-60155323 None:intergenic 55.0%
!! ACCGATTCGGGGATCAGTGA+GGG + chr2.4:60154168-60154187 None:intergenic 55.0%
!! ATGAGACTGGCACCGATTCG+GGG + chr2.4:60154179-60154198 None:intergenic 55.0%
!! GAATCGGTGCCAGTCTCATC+AGG - chr2.4:60154180-60154199 MS.gene003275:CDS 55.0%
!! GATGAGACTGGCACCGATTC+GGG + chr2.4:60154180-60154199 None:intergenic 55.0%
!! TCCTCTGGATTAGCTCGTGG+TGG - chr2.4:60157169-60157188 MS.gene003275:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.4:60155830-60155849 MS.gene003275:intron 60.0%
!! CACCGATTCGGGGATCAGTG+AGG + chr2.4:60154169-60154188 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 60154020 60157222 60154020 ID=MS.gene003275
chr2.4 mRNA 60154020 60157222 60154020 ID=MS.gene003275.t1;Parent=MS.gene003275
chr2.4 exon 60157013 60157222 60157013 ID=MS.gene003275.t1.exon1;Parent=MS.gene003275.t1
chr2.4 CDS 60157013 60157222 60157013 ID=cds.MS.gene003275.t1;Parent=MS.gene003275.t1
chr2.4 exon 60156252 60156443 60156252 ID=MS.gene003275.t1.exon2;Parent=MS.gene003275.t1
chr2.4 CDS 60156252 60156443 60156252 ID=cds.MS.gene003275.t1;Parent=MS.gene003275.t1
chr2.4 exon 60155242 60155407 60155242 ID=MS.gene003275.t1.exon3;Parent=MS.gene003275.t1
chr2.4 CDS 60155242 60155407 60155242 ID=cds.MS.gene003275.t1;Parent=MS.gene003275.t1
chr2.4 exon 60154020 60154489 60154020 ID=MS.gene003275.t1.exon4;Parent=MS.gene003275.t1
chr2.4 CDS 60154020 60154489 60154020 ID=cds.MS.gene003275.t1;Parent=MS.gene003275.t1
Gene Sequence

>MS.gene003275

ATGGGTTCCATGCGTGTTGTACTAGGGTTGGCACTTTGGTGTGCATTTGTGATGCATGGAGGGTATGGTTGGCTCAGTCCATCATTCTACAGTGAAACATGTCCAGATCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATCGGTGCCAGTCTCATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGTATGTTATTATCTATAGATTGTTATGTTCATCCATATAAATAATTTCTAACTTTCTTACACTAGGCCTTTGCAATTACAACCTACTTCTTTCTTTGAAATTGAACATATGGTGTTGAAAAGTTTAGTAACAAAGTTCTTTGCCTAAAATGATTATAGGTTCGATCGATTCCTCAATTCGTCTATTTGAGAAGAAGTTTGATCATGTGTGTAGATTAAAAATGAACGTTCTTTTCTTCTTCTTTTTTTAGAGGAAAAAATGAATGTCCTTATATTGGGCTCATAAAGATTTTTAGTGGTATTCAATAACGGAATATACCAATGACCTACAAACAAAATAAAGATTTAAATATGATTTTAGTCAATGCATTATAGTTTTTTTTTTTAATCCCAACGTCAACTTATTGAATTAGATGACAAGATTTTAATTATTGGGTGAATGACTAAGAACAATTTTAACAATTGTAAAGACAAAATTTAAATAAAAAACTAACATGGATTAAAAATTAAAATCAAAATATACTATAAGTACAAGGGCTTATGCATGTTGTTTATGCATGTTTGTGACAGGGCTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAGGATGCATTTCCAAACAGAAACTCATTAAGGGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAGAAGAATGTCCTAACACTGTTTCTTGTGCTGATATTCTTACCATTGCTGCTGAAGTATCTTCTATTTTGGTATGTTTTTAATTTCATCAACTTTTTTTATTACCTAGTTATATGGATAAAATTATTTTAAAATTTTAATGTTTTGTTTTTATATTAGGAGCTTTGTTTTTTTAACATCAAACAAAATTTTATATTCACCAAAATACTCTATCCACCAAAATAATCTCAATACACCATCACTTACCAATACATTCTAAAAGGTTGGCATACCATTCATAAAATAAAGTTCCAATACAAACTTACTTTTTTGAATTTATTAACATATGCAAATTTGCATATGATAAAAAAACTTATAAAATAAATAAGGATATCCCAATTTCCTCCGCAAGATGCACTTCCAAGACAAATGTTTTATCCCTTCTTTTATCTCTTTCACTTCTGCATGTTTTGTACAAATTGCCCACAACACCTTCTGTCAACTCAACAACAAGCCGGTTTTGTGGTCTCATGATTTCTTTCTATTTGGTTGAGTTGTACTCTTTTAATATTCATTTGCCATTAGAAAAAACTATTATTTACATATGAATTTTTTTAATTAAATATTGTGAATTTTTTATTGTGATTAATAATTTTGAGCAATTATCTCTCAAACTTTTTTTGAGCAATTATCTCTCAAACTTTTTTTTGAGCAATAAGAAATAGTTTTTGTAACCAAAAGAAAAAGAAAAGGAATAGTTTCACTAAGTAATTTATTTATTTTCTATGCCTATCAATACCTAAAATAATTTATTTTCTATGATTTTAATTATATATATAATTAAAATCATAGCTCAAACTTTATATGGTCACTTATAATTTTTCCTTCTCAAATGTCCATCTTAAAGTCCTCTAATGTATATTGATCTATGAACAGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGGGATAGCTTAACCGCAAACATAACTCTTGCAAATCAAAATCTTCCCGGACCCTTCTCTACATTGGATCAACTTAAAGCTTCATTTCTTGTTCAAGGTCTCAACACTACAGATTTAGTTACACTCTCAGGTATAATATTACACATAATCATCAATTTAATATTTACCAACAACAAAGCTTCATTAAAAATAGATTTATGCACTTTTAATTCTCATATTTTATTACACTACTCACAAAAATAGTCATTCTATTTTAAAATCAAATTTTTTGATCCCTCAATTATCACGGTTGTTGCAATTTTGGTCTCAGTCCATATTTTTTACGCGAACAAATTGTGATTTTTGGCTCGAAAAATGGTACTTTCTCTTCAAATTACAATTGGGATAGCAAATCACCGTTTTTGGGCAAAAAATCATCATTTTAAACGTAAAAAGTTTATATTTGAATCAAAATTGCAACAAATGTGATAACAGAGAAAATAGAAAACTTGATTTTAAAATGGAGACTACTTTTTATAGGTGTGATAAAATAGAGGGACCGTCATCGTGAACTTAACTCAGTTGGTAGGAACAATACATAATATAAGCAATGTTCGGGGTTCAAACCCTGACCACCACAAAAAAAATAGATGGGGTTCAAACCCTGACCACCACAAAAAAAAATAGATGGACCAAAATTTTTAAAAAGGCAAACTTATGCTTCATATACAACATGTAATTAACCTAAATATTTTTCGAACTCTAAAGTTTTTATCACTGTTTCAACTTTTTCTAGCATTCCTTCGTAATTAACCTCACACACAAATATTACACAACGTGTAATTAACATAAATTTCCTTAAAAAAAATGTAATTAACCTAACCTTTTTTTTTTTATACTTAGGTGCTCATACATTCGGAAGAGCTCGTTGCAGTACATTCATCAACCGTCTATACAATTTCAGTGGCACTGGAAATCCTGATCCAACACTAAACACAACTTACTTACAAACATTGCGTCTGATATGTCCCCAAAACTCAACAGGAAACAACCTAGCCAATTTGGACCGTACTACACCAAATCACTTTGATAACAAATATTACTCCAATCTTCAAAACCTCAATGGCTTACTTCGAAGTGATCAAGTGCTATTCTCCACTCCTAATGCAGATACCATTGCCATTGTTAATAGCTTTAGCAGAAACCAAACTCTCTTCTTTCAGAATTTTAGTGTGTCGATGATTAAAATGGCGAATATTGGAGTGTTAACTGGTGATGAAGGGGAAATTAGGTTGCAATGTAATTTTGTAAATGGTAACTCCTCTGGATTAGCTCGTGGTGGATCAAAAGATGGCTTGTTAAGCTCATTCTAA
Protein sequence

>MS.gene003275.t1

MGSMRVVLGLALWCAFVMHGGYGWLSPSFYSETCPDLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNRNSLRGLDVVNQIKTAVEEECPNTVSCADILTIAAEVSSILGGGPSWPIPLGRRDSLTANITLANQNLPGPFSTLDQLKASFLVQGLNTTDLVTLSGAHTFGRARCSTFINRLYNFSGTGNPDPTLNTTYLQTLRLICPQNSTGNNLANLDRTTPNHFDNKYYSNLQNLNGLLRSDQVLFSTPNADTIAIVNSFSRNQTLFFQNFSVSMIKMANIGVLTGDEGEIRLQCNFVNGNSSGLARGGSKDGLLSSF