AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74566

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74566.t1 MTR_2g029730 93.333 345 23 0 1 345 1 345 0.0 658
MS.gene74566.t1 MTR_2g029560 83.768 345 55 1 1 345 1 344 0.0 590
MS.gene74566.t1 MTR_2g029820 64.045 356 116 3 1 345 1 355 6.12e-163 459
MS.gene74566.t1 MTR_2g029740 65.882 340 110 2 1 335 1 339 2.32e-160 452
MS.gene74566.t1 MTR_2g029815 64.589 353 116 3 1 345 1 352 5.01e-160 452
MS.gene74566.t1 MTR_2g029800 65.407 344 110 3 11 345 10 353 1.26e-159 451
MS.gene74566.t1 MTR_2g029830 66.566 332 104 1 8 332 4 335 4.40e-159 449
MS.gene74566.t1 MTR_2g029750 65.861 331 108 1 7 332 6 336 1.11e-156 443
MS.gene74566.t1 MTR_2g029850 64.589 353 114 4 1 344 1 351 2.65e-154 437
MS.gene74566.t1 MTR_2g028980 63.205 337 118 2 1 332 1 336 1.36e-150 428
MS.gene74566.t1 MTR_2g029860 64.535 344 113 3 11 345 10 353 1.95e-150 427
MS.gene74566.t1 MTR_2g029910 62.099 343 122 3 11 345 11 353 1.72e-148 422
MS.gene74566.t1 MTR_2g029830 72.243 263 73 0 70 332 5 267 4.14e-137 391
MS.gene74566.t1 MTR_7g093370 56.869 313 134 1 16 327 60 372 8.25e-121 353
MS.gene74566.t1 MTR_1g054205 53.560 323 149 1 6 327 5 327 2.44e-118 345
MS.gene74566.t1 MTR_5g021060 51.155 303 147 1 24 326 29 330 2.45e-110 325
MS.gene74566.t1 MTR_4g125940 54.276 304 135 2 25 326 28 329 1.95e-108 320
MS.gene74566.t1 MTR_8g076820 49.175 303 153 1 24 326 29 330 7.57e-107 316
MS.gene74566.t1 MTR_5g017860 51.839 299 140 3 29 326 31 326 2.28e-103 307
MS.gene74566.t1 MTR_5g017850 51.171 299 142 3 29 326 31 326 2.94e-102 304
MS.gene74566.t1 MTR_4g125940 56.727 275 115 2 54 326 2 274 3.64e-102 302
MS.gene74566.t1 MTR_5g074970 46.847 333 161 5 1 326 3 326 3.71e-101 301
MS.gene74566.t1 MTR_1g022970 48.675 302 155 0 25 326 46 347 9.73e-101 301
MS.gene74566.t1 MTR_2g040000 49.836 305 148 2 25 326 29 331 8.98e-100 298
MS.gene74566.t1 MTR_3g466200 47.040 321 157 5 10 326 9 320 5.17e-96 288
MS.gene74566.t1 MTR_4g029200 48.525 305 148 2 22 326 43 338 9.84e-96 288
MS.gene74566.t1 MTR_4g122640 46.037 328 167 3 6 326 12 336 2.92e-95 286
MS.gene74566.t1 MTR_3g094650 50.331 302 139 3 23 322 26 318 3.95e-94 283
MS.gene74566.t1 MTR_7g072510 46.689 302 152 2 25 326 20 312 3.72e-93 280
MS.gene74566.t1 MTR_4g029190 47.531 324 158 5 6 326 26 340 3.81e-93 281
MS.gene74566.t1 MTR_5g083860 47.697 304 148 3 25 326 31 325 2.53e-92 279
MS.gene74566.t1 MTR_5g074760 48.208 307 148 5 25 328 25 323 1.17e-91 277
MS.gene74566.t1 MTR_7g072480 47.682 302 149 2 25 326 24 316 1.17e-91 276
MS.gene74566.t1 MTR_2g084110 47.651 298 147 2 29 326 29 317 1.61e-91 276
MS.gene74566.t1 MTR_2g084080 47.315 298 148 2 29 326 29 317 5.31e-91 275
MS.gene74566.t1 MTR_4g083710 45.921 331 167 5 1 326 1 324 1.00e-90 275
MS.gene74566.t1 MTR_5g014100 46.774 310 161 2 21 326 22 331 3.51e-90 273
MS.gene74566.t1 MTR_3g072190 45.695 302 155 2 25 326 26 318 7.43e-90 272
MS.gene74566.t1 MTR_5g074710 45.593 329 168 5 1 326 1 321 8.79e-89 270
MS.gene74566.t1 MTR_5g074740 47.213 305 150 5 25 326 25 321 3.72e-88 268
MS.gene74566.t1 MTR_5g049280 44.304 316 165 6 18 326 26 337 4.40e-88 268
MS.gene74566.t1 MTR_5g074860 47.712 306 149 5 23 325 27 324 1.28e-87 266
MS.gene74566.t1 MTR_3g094670 47.022 319 157 4 6 322 10 318 2.93e-87 266
MS.gene74566.t1 MTR_2g084020 46.309 298 152 2 29 326 29 318 5.51e-87 265
MS.gene74566.t1 MTR_2g084090 45.574 305 156 3 23 326 23 318 9.18e-87 264
MS.gene74566.t1 MTR_4g029170 45.779 308 154 5 22 326 24 321 1.56e-86 264
MS.gene74566.t1 MTR_2g084010 46.026 302 155 2 25 326 25 318 5.74e-86 262
MS.gene74566.t1 MTR_4g133800 45.333 300 149 7 30 326 46 333 6.83e-86 263
MS.gene74566.t1 MTR_4g029180 46.667 300 149 4 29 326 31 321 2.47e-85 261
MS.gene74566.t1 MTR_3g094630 47.284 313 154 3 16 326 19 322 5.34e-85 260
MS.gene74566.t1 MTR_4g074995 46.254 307 142 4 23 326 22 308 1.14e-84 258
MS.gene74566.t1 MTR_1g115900 44.918 305 157 5 25 327 27 322 2.33e-84 258
MS.gene74566.t1 MTR_2g084000 44.737 304 160 3 23 326 24 319 3.46e-84 258
MS.gene74566.t1 MTR_7g026990 44.040 302 153 5 29 327 35 323 1.34e-82 254
MS.gene74566.t1 MTR_2g008710 44.702 302 156 5 29 326 31 325 1.15e-81 251
MS.gene74566.t1 MTR_4g030890 44.040 302 164 3 25 326 100 396 1.18e-81 254
MS.gene74566.t1 MTR_2g088770 43.322 307 168 5 22 326 23 325 1.24e-81 251
MS.gene74566.t1 MTR_2g437770 44.079 304 158 6 25 327 50 342 7.09e-81 250
MS.gene74566.t1 MTR_4g031140 42.395 309 171 4 25 332 28 330 6.58e-80 248
MS.gene74566.t1 MTR_4g046713 40.673 327 190 3 1 326 3 326 1.32e-79 246
MS.gene74566.t1 MTR_7g107520 42.991 321 176 5 6 326 7 320 2.78e-79 245
MS.gene74566.t1 MTR_6g043280 42.202 327 165 7 11 326 19 332 2.86e-79 246
MS.gene74566.t1 MTR_4g074990 43.648 307 147 4 23 326 22 305 1.67e-78 243
MS.gene74566.t1 MTR_3g466180 43.377 302 162 2 25 326 31 323 5.14e-78 242
MS.gene74566.t1 MTR_6g043240 43.871 310 158 7 25 332 42 337 8.07e-78 243
MS.gene74566.t1 MTR_1g038680 43.894 303 162 5 29 326 33 332 8.85e-78 242
MS.gene74566.t1 MTR_3g467600 43.082 318 171 4 12 326 14 324 9.82e-78 241
MS.gene74566.t1 MTR_1g086320 43.046 302 166 3 29 326 34 333 1.04e-77 241
MS.gene74566.t1 MTR_4g114210 42.395 309 162 6 25 326 21 320 2.54e-77 240
MS.gene74566.t1 MTR_5g022870 40.061 327 184 8 1 326 1 316 2.45e-76 238
MS.gene74566.t1 MTR_3g092990 40.252 318 187 2 10 326 11 326 3.10e-76 238
MS.gene74566.t1 MTR_1g086490 39.766 342 188 5 1 326 1 340 3.59e-76 238
MS.gene74566.t1 MTR_2g029880 59.524 210 73 3 137 344 9 208 4.18e-76 233
MS.gene74566.t1 MTR_8g075100 42.244 303 165 7 25 326 26 319 1.12e-75 236
MS.gene74566.t1 MTR_1g025980 42.053 302 166 6 25 325 24 317 4.88e-75 234
MS.gene74566.t1 MTR_1g101830 40.397 302 174 4 25 326 27 322 2.01e-74 233
MS.gene74566.t1 MTR_1g077000 41.060 302 165 5 25 326 39 327 3.03e-74 233
MS.gene74566.t1 MTR_4g087965 40.656 305 172 6 25 323 42 343 1.14e-72 229
MS.gene74566.t1 MTR_0155s0040 38.580 324 185 6 3 326 6 315 1.81e-72 228
MS.gene74566.t1 MTR_4g074980 42.105 304 144 5 23 326 23 294 6.35e-72 225
MS.gene74566.t1 MTR_1g090760 39.414 307 181 4 23 326 26 330 6.11e-71 224
MS.gene74566.t1 MTR_7g029030 41.692 331 177 9 1 326 1 320 9.59e-71 223
MS.gene74566.t1 MTR_3g072190 43.629 259 137 2 68 326 2 251 1.44e-70 220
MS.gene74566.t1 MTR_7g086820 39.869 306 175 5 21 326 16 312 1.61e-70 223
MS.gene74566.t1 MTR_5g016010 37.764 331 197 5 1 325 1 328 3.55e-69 219
MS.gene74566.t1 MTR_4g074980 47.257 237 116 2 23 256 23 253 3.81e-69 217
MS.gene74566.t1 MTR_6g043460 40.836 311 171 6 25 333 36 335 4.11e-68 217
MS.gene74566.t1 MTR_4g132490 37.846 325 193 5 4 326 10 327 4.82e-68 216
MS.gene74566.t1 MTR_6g027440 39.815 324 184 7 4 326 1 314 1.08e-66 213
MS.gene74566.t1 MTR_4g127670 39.934 303 172 5 24 322 23 319 2.16e-65 209
MS.gene74566.t1 MTR_5g074860 39.869 306 134 4 23 325 27 285 4.32e-65 207
MS.gene74566.t1 MTR_4g095450 39.024 328 186 6 1 322 1 320 1.42e-64 207
MS.gene74566.t1 MTR_1g009750 40.391 307 173 7 25 326 27 328 2.17e-64 207
MS.gene74566.t1 MTR_3g092990 38.050 318 183 3 10 326 11 315 6.09e-64 206
MS.gene74566.t1 MTR_2g008160 38.608 316 178 8 18 326 17 323 2.38e-63 204
MS.gene74566.t1 MTR_8g062780 35.423 319 202 3 10 326 8 324 1.59e-62 202
MS.gene74566.t1 MTR_2g008730 44.898 245 127 4 86 326 61 301 6.54e-62 200
MS.gene74566.t1 MTR_2g078610 35.758 330 179 6 25 323 76 403 1.27e-60 200
MS.gene74566.t1 MTR_2g067440 35.045 331 181 7 25 325 60 386 1.66e-60 199
MS.gene74566.t1 MTR_2g077990 36.556 331 175 7 25 323 76 403 3.05e-60 199
MS.gene74566.t1 MTR_2g099175 36.808 307 182 4 25 326 36 335 4.34e-60 196
MS.gene74566.t1 MTR_5g033470 36.774 310 187 6 23 326 71 377 2.32e-59 196
MS.gene74566.t1 MTR_7g086870 36.513 304 181 5 23 326 20 311 9.81e-59 192
MS.gene74566.t1 MTR_3g105790 38.689 305 177 4 25 326 25 322 3.09e-58 191
MS.gene74566.t1 MTR_0286s0010 37.459 307 181 7 25 326 34 334 2.11e-57 189
MS.gene74566.t1 MTR_6g008075 37.459 307 181 7 25 326 34 334 2.11e-57 189
MS.gene74566.t1 MTR_0147s0010 34.891 321 173 4 25 325 77 381 4.43e-57 190
MS.gene74566.t1 MTR_2g078280 36.562 320 168 7 25 312 76 392 6.37e-56 187
MS.gene74566.t1 MTR_1g009750 37.459 307 165 8 25 326 27 311 4.51e-55 182
MS.gene74566.t1 MTR_2g067450 36.393 305 184 6 25 325 11 309 1.14e-54 181
MS.gene74566.t1 MTR_1g066710 34.295 312 192 5 21 328 23 325 2.67e-54 181
MS.gene74566.t1 MTR_1g066380 33.441 311 196 4 21 328 23 325 2.25e-51 173
MS.gene74566.t1 MTR_1g066680 34.084 311 193 5 21 328 23 324 1.83e-49 168
MS.gene74566.t1 MTR_1g066640 33.441 311 196 4 21 328 23 325 5.98e-49 167
MS.gene74566.t1 MTR_4g132110 33.444 302 188 5 29 326 36 328 4.47e-48 165
MS.gene74566.t1 MTR_2g008160 33.861 316 158 8 18 326 17 288 6.86e-48 163
MS.gene74566.t1 MTR_5g074700 41.810 232 110 6 98 326 5 214 1.21e-46 157
MS.gene74566.t1 MTR_4g132110 32.899 307 188 6 29 326 36 333 3.27e-46 160
MS.gene74566.t1 MTR_2g008160 43.860 171 92 3 20 190 19 185 1.31e-43 149
MS.gene74566.t1 MTR_1g066380 34.470 264 160 5 69 328 3 257 1.07e-42 149
MS.gene74566.t1 MTR_7g072490 38.800 250 90 4 71 320 2 188 1.96e-42 146
MS.gene74566.t1 MTR_3g105790 39.496 238 138 3 92 326 12 246 7.56e-42 146
MS.gene74566.t1 MTR_3g072210 43.229 192 100 4 136 326 55 238 1.65e-40 142
MS.gene74566.t1 MTR_3g072260 47.934 121 63 0 21 141 22 142 4.67e-34 122
MS.gene74566.t1 MTR_2g078560 31.858 226 121 4 131 325 96 319 7.75e-30 116
MS.gene74566.t1 MTR_5g058120 38.037 163 88 3 160 322 6 155 7.38e-26 104
MS.gene74566.t1 MTR_2g077980 27.273 275 158 8 87 323 11 281 2.06e-24 101
MS.gene74566.t1 MTR_2g029930 55.000 100 17 3 23 108 17 102 2.37e-24 95.9
MS.gene74566.t1 MTR_1g089005 40.310 129 70 2 15 137 5 132 1.29e-22 92.8
MS.gene74566.t1 MTR_7g086790 30.851 188 108 4 72 259 17 182 3.06e-20 87.4
MS.gene74566.t1 MTR_1g098320 45.455 88 46 1 245 332 45 130 4.03e-18 80.1
MS.gene74566.t1 MTR_3g462850 36.552 145 81 6 189 326 9 149 5.56e-18 80.1
MS.gene74566.t1 MTR_6g048160 53.521 71 29 2 64 134 22 88 1.44e-17 77.0
MS.gene74566.t1 MTR_4g114220 48.101 79 31 2 51 129 29 97 1.82e-17 78.6
MS.gene74566.t1 MTR_3g088160 28.141 199 115 7 118 310 180 356 8.16e-15 75.1
MS.gene74566.t1 MTR_3g088160 28.141 199 115 7 118 310 180 356 1.23e-14 75.1
MS.gene74566.t1 MTR_4g031040 30.286 175 78 3 84 258 1 131 2.32e-14 69.7
MS.gene74566.t1 MTR_5g074770 39.785 93 55 1 233 325 17 108 7.03e-14 67.4
MS.gene74566.t1 MTR_4g012865 45.588 68 37 0 25 92 77 144 8.40e-13 65.9
MS.gene74566.t1 MTR_7g086810 30.081 123 60 1 21 143 2 98 2.16e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74566.t1 AT5G06720 57.632 321 136 0 7 327 14 334 1.86e-130 376
MS.gene74566.t1 AT5G06730 58.199 311 130 0 25 335 33 343 4.26e-128 371
MS.gene74566.t1 AT2G38390 55.280 322 140 2 25 345 31 349 5.01e-124 360
MS.gene74566.t1 AT2G38380 54.348 322 143 2 25 345 31 349 5.05e-122 355
MS.gene74566.t1 AT4G08770 54.662 311 139 2 22 330 21 331 5.31e-121 352
MS.gene74566.t1 AT4G08780 54.341 311 140 2 22 330 21 331 3.74e-120 350
MS.gene74566.t1 AT3G32980 57.655 307 128 2 25 329 31 337 5.21e-120 350
MS.gene74566.t1 AT3G49120 57.329 307 129 2 25 329 32 338 1.17e-119 349
MS.gene74566.t1 AT3G49110 54.294 326 144 3 6 329 17 339 9.94e-117 342
MS.gene74566.t1 AT5G66390 48.701 308 157 1 19 326 27 333 2.10e-107 317
MS.gene74566.t1 AT2G18150 50.163 307 152 1 20 326 31 336 6.53e-107 316
MS.gene74566.t1 AT2G18140 50.993 302 147 1 25 326 35 335 2.49e-106 315
MS.gene74566.t1 AT1G44970 51.475 305 148 0 22 326 42 346 3.25e-105 312
MS.gene74566.t1 AT4G36430 49.013 304 154 1 23 326 28 330 3.74e-105 311
MS.gene74566.t1 AT1G49570 50.485 309 148 3 19 324 42 348 5.55e-104 309
MS.gene74566.t1 AT5G19890 50.000 322 149 5 7 326 16 327 6.62e-104 308
MS.gene74566.t1 AT5G19880 52.117 307 144 2 23 326 23 329 1.14e-103 308
MS.gene74566.t1 AT3G50990 48.675 302 154 1 25 326 41 341 1.56e-101 303
MS.gene74566.t1 AT1G14550 48.185 303 149 3 25 326 26 321 1.46e-93 282
MS.gene74566.t1 AT5G05340 47.697 304 148 4 25 326 30 324 3.40e-93 281
MS.gene74566.t1 AT2G35380 50.000 306 149 3 25 326 30 335 6.59e-91 275
MS.gene74566.t1 AT1G14540 45.399 326 167 3 1 326 1 315 2.81e-90 273
MS.gene74566.t1 AT5G58400 44.615 325 168 4 5 326 10 325 2.74e-87 266
MS.gene74566.t1 AT5G58390 47.213 305 149 4 25 326 21 316 5.14e-87 265
MS.gene74566.t1 AT1G68850 45.277 307 162 5 25 326 30 335 2.24e-86 264
MS.gene74566.t1 AT4G16270 44.816 299 160 4 29 326 54 348 1.74e-85 262
MS.gene74566.t1 AT3G03670 41.195 318 178 4 12 326 10 321 2.11e-81 251
MS.gene74566.t1 AT2G22420 42.384 302 169 3 25 326 23 319 1.04e-79 246
MS.gene74566.t1 AT2G41480 44.337 309 156 7 25 326 29 328 1.93e-79 246
MS.gene74566.t1 AT5G15180 41.639 305 168 5 25 326 32 329 2.10e-79 246
MS.gene74566.t1 AT4G11290 41.538 325 182 4 8 326 4 326 1.49e-78 243
MS.gene74566.t1 AT5G64120 44.966 298 156 5 29 326 39 328 1.62e-78 243
MS.gene74566.t1 AT1G71695 43.269 312 162 7 21 329 43 342 1.19e-77 242
MS.gene74566.t1 AT3G01190 40.491 326 186 6 2 326 3 321 2.65e-77 240
MS.gene74566.t1 AT5G51890 40.000 305 172 6 25 326 26 322 3.39e-75 235
MS.gene74566.t1 AT1G05260 39.514 329 189 6 4 326 1 325 9.29e-75 234
MS.gene74566.t1 AT5G17820 39.550 311 176 5 16 326 15 313 1.43e-74 233
MS.gene74566.t1 AT2G18980 40.810 321 179 5 10 326 10 323 2.10e-74 233
MS.gene74566.t1 AT1G05240 40.461 304 167 5 29 326 30 325 1.02e-73 231
MS.gene74566.t1 AT1G05250 40.461 304 167 5 29 326 30 325 1.02e-73 231
MS.gene74566.t1 AT5G42180 40.000 320 183 6 7 325 5 316 2.13e-73 230
MS.gene74566.t1 AT4G25980 40.391 307 172 5 25 326 26 326 3.42e-73 230
MS.gene74566.t1 AT5G17820 39.550 311 176 5 16 326 68 366 6.28e-73 230
MS.gene74566.t1 AT4G37530 42.020 307 173 3 23 326 25 329 1.97e-72 228
MS.gene74566.t1 AT5G39580 44.040 302 154 7 29 326 29 319 6.29e-72 226
MS.gene74566.t1 AT3G21770 40.453 309 178 5 17 323 21 325 1.16e-71 226
MS.gene74566.t1 AT1G30870 39.935 308 172 6 25 329 51 348 3.93e-70 223
MS.gene74566.t1 AT4G33420 40.190 316 170 6 17 326 23 325 5.50e-70 221
MS.gene74566.t1 AT4G33420 40.190 316 170 6 17 326 70 372 2.85e-69 221
MS.gene74566.t1 AT5G64100 40.532 301 166 6 29 326 41 331 6.31e-69 219
MS.gene74566.t1 AT5G67400 39.514 329 190 6 3 326 5 329 7.70e-69 219
MS.gene74566.t1 AT5G64110 43.046 302 159 7 29 326 38 330 1.27e-68 218
MS.gene74566.t1 AT4G30170 39.610 308 175 5 23 326 25 325 1.37e-68 218
MS.gene74566.t1 AT4G33870 36.119 335 176 5 24 323 67 398 1.40e-68 220
MS.gene74566.t1 AT3G49960 38.154 325 194 4 6 326 8 329 3.60e-68 217
MS.gene74566.t1 AT2G35380 48.988 247 122 3 84 326 1 247 4.38e-68 214
MS.gene74566.t1 AT2G34060 40.328 305 173 6 25 323 42 343 1.19e-66 214
MS.gene74566.t1 AT5G14130 39.355 310 173 7 23 326 30 330 2.77e-66 212
MS.gene74566.t1 AT5G14130 39.610 308 171 7 25 326 73 371 6.13e-66 213
MS.gene74566.t1 AT2G39040 40.514 311 174 7 23 326 44 350 1.34e-65 211
MS.gene74566.t1 AT4G37520 38.762 307 183 3 23 326 25 329 2.27e-65 210
MS.gene74566.t1 AT3G28200 37.829 304 179 4 25 326 21 316 1.77e-64 207
MS.gene74566.t1 AT4G37520 38.436 307 181 4 23 326 25 326 4.00e-64 206
MS.gene74566.t1 AT1G77100 40.256 313 169 8 21 326 18 319 1.23e-63 205
MS.gene74566.t1 AT5G24070 39.274 303 171 6 31 328 43 337 1.25e-63 206
MS.gene74566.t1 AT4G37530 43.529 255 141 2 23 274 25 279 3.13e-63 202
MS.gene74566.t1 AT5G40150 37.864 309 183 4 20 326 27 328 5.77e-63 204
MS.gene74566.t1 AT1G24110 36.066 305 188 5 25 326 22 322 3.97e-62 201
MS.gene74566.t1 AT4G26010 36.728 324 189 6 4 326 1 309 2.77e-61 199
MS.gene74566.t1 AT4G26010 36.728 324 189 6 4 326 29 337 6.33e-61 199
MS.gene74566.t1 AT4G17690 36.721 305 182 5 25 326 26 322 1.17e-60 197
MS.gene74566.t1 AT5G22410 36.760 321 189 8 7 322 10 321 3.52e-60 196
MS.gene74566.t1 AT5G47000 33.642 324 205 5 6 326 14 330 4.79e-60 196
MS.gene74566.t1 AT2G24800 39.869 306 173 5 25 326 31 329 1.14e-59 195
MS.gene74566.t1 AT4G31760 38.312 308 174 6 25 326 29 326 4.82e-59 193
MS.gene74566.t1 AT2G43480 39.286 280 157 6 52 326 64 335 3.97e-58 191
MS.gene74566.t1 AT1G34510 34.462 325 195 7 4 326 1 309 6.54e-55 182
MS.gene74566.t1 AT3G17070 35.650 331 193 9 8 326 17 339 3.91e-53 178
MS.gene74566.t1 AT4G21960 32.239 335 209 7 2 328 5 329 1.48e-48 166
MS.gene74566.t1 AT2G37130 32.803 314 199 5 17 326 22 327 4.78e-47 162
MS.gene74566.t1 AT4G25980 45.882 170 88 3 25 194 71 236 3.07e-46 159
MS.gene74566.t1 AT2G37130 32.781 302 191 5 29 326 3 296 7.21e-45 155
MS.gene74566.t1 AT3G17070 34.397 282 168 9 53 326 4 276 8.10e-39 139
MS.gene74566.t1 AT5G39580 41.748 206 105 5 29 227 29 226 6.12e-38 135
MS.gene74566.t1 AT2G24800 43.931 173 87 3 25 194 31 196 2.15e-33 124
MS.gene74566.t1 AT1G77490 26.394 269 148 11 59 310 106 341 1.70e-16 80.5
MS.gene74566.t1 AT1G77490 26.394 269 148 11 59 310 106 341 2.87e-16 79.7
MS.gene74566.t1 AT4G08390 25.461 271 148 11 59 310 126 361 5.75e-14 72.8
MS.gene74566.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.34e-14 72.4
MS.gene74566.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.34e-14 72.4
MS.gene74566.t1 AT4G08390 25.461 271 148 11 59 310 127 362 6.34e-14 72.4
MS.gene74566.t1 AT4G32320 26.165 279 150 10 36 309 96 323 9.09e-13 68.6

Find 87 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGAAGTATCTTCTATTT+TGG 0.206832 2.3:-59993165 MS.gene74566:intron
GGTTGTTTCCTGTTGAGTTT+TGG 0.220863 2.3:+59991757 None:intergenic
TTCCAAACAGAAACTCATTA+AGG 0.226113 2.3:-59993274 MS.gene74566:CDS
AGGAAACAACCTAGCCAATT+TGG 0.278951 2.3:-59991745 MS.gene74566:CDS
GATGAGACTGGCACCGATTC+GGG 0.301159 2.3:+59993993 None:intergenic
CCCCTTAATGAGTTTCTGTT+TGG 0.309457 2.3:+59993272 None:intergenic
CTGGTGATGAAGGGGAAATT+AGG 0.315180 2.3:-59991518 MS.gene74566:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.3:+59994036 None:intergenic
AATTCTGAAAGAAGAGAGTT+TGG 0.333317 2.3:+59991583 None:intergenic
CAGAAACTCATTAAGGGGTT+TGG 0.333622 2.3:-59993267 MS.gene74566:CDS
TACTTAGGTGCTCATACATT+TGG 0.341082 2.3:-59991891 MS.gene74566:intron
AAAGCTTCATTTCTTGTTCA+AGG 0.342588 2.3:-59992189 MS.gene74566:CDS
TCCCTTCTTCCCAATGGAAT+TGG 0.355749 2.3:+59992282 None:intergenic
GGTTCCATGCGTGTTGTACT+AGG 0.361248 2.3:-59994147 MS.gene74566:CDS
TTTGTAAATGGTAACTCCTC+TGG 0.366528 2.3:-59991483 MS.gene74566:CDS
ATGATTAGAATGGCGAATAT+TGG 0.398231 2.3:-59991549 MS.gene74566:CDS
TATTTGTTATCAAAGTGATT+AGG 0.408604 2.3:+59991711 None:intergenic
TCCAAACAGAAACTCATTAA+GGG 0.412491 2.3:-59993273 MS.gene74566:CDS
GCGAATATTGGAGTGTTAAC+TGG 0.413231 2.3:-59991537 MS.gene74566:CDS
TGATGAGACTGGCACCGATT+CGG 0.427794 2.3:+59993992 None:intergenic
AGGTGTGGTAAGGTCCAAAT+TGG 0.430992 2.3:+59991731 None:intergenic
CTTGCAAATCAAAACCTTCC+CGG 0.432751 2.3:-59992237 MS.gene74566:CDS
ATGGCAATGGTATCTGCATT+AGG 0.433475 2.3:+59991627 None:intergenic
TCCCTCATGGCCAATTCCAT+TGG 0.444960 2.3:-59992292 MS.gene74566:CDS
GTTGTGTTTAGTGTTGGATC+AGG 0.445757 2.3:+59991810 None:intergenic
ATATGTCCCCAAAACTCAAC+AGG 0.446009 2.3:-59991765 MS.gene74566:CDS
CCCTCATGGCCAATTCCATT+GGG 0.446682 2.3:-59992291 MS.gene74566:CDS
ATATGACTCTAAACACAATA+GGG 0.454551 2.3:+59994037 None:intergenic
TCCCTCACTGATCCCCGAAT+CGG 0.454674 2.3:-59994006 MS.gene74566:CDS
GAATCGGTGCCAGTCTCATC+AGG 0.463560 2.3:-59993990 MS.gene74566:CDS
TCCAATCTTCAAAACCTCAA+TGG 0.466595 2.3:-59991684 MS.gene74566:CDS
GGCCAATTCCATTGGGAAGA+AGG 0.467383 2.3:-59992284 MS.gene74566:CDS
TTTGTGATGCATGGAGGGTA+TGG 0.479593 2.3:-59994105 MS.gene74566:CDS
CACTTCGAAGTAAGCCATTG+AGG 0.486340 2.3:+59991670 None:intergenic
CTATACAATTTCAGTGGCAC+TGG 0.489654 2.3:-59991837 MS.gene74566:CDS
TCCCGGACCCTTCTCTACAT+TGG 0.499367 2.3:-59992220 MS.gene74566:CDS
TAGCGTGTCGATGATTAGAA+TGG 0.500186 2.3:-59991559 MS.gene74566:CDS
TGGTGTGCATTTGTGATGCA+TGG 0.501927 2.3:-59994114 MS.gene74566:CDS
ATCCAATGTAGAGAAGGGTC+CGG 0.504853 2.3:+59992218 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.3:-59992156 MS.gene74566:intron
GGAGTGTTAACTGGTGATGA+AGG 0.514476 2.3:-59991528 MS.gene74566:CDS
AACACAATAGGGTATAGATC+TGG 0.518782 2.3:+59994048 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.3:-59994031 MS.gene74566:CDS
ATTTGCAAGAGTTATGTTTG+CGG 0.522007 2.3:+59992251 None:intergenic
TCCAATGTAGAGAAGGGTCC+GGG 0.526068 2.3:+59992219 None:intergenic
GCCAATTCCATTGGGAAGAA+GGG 0.526946 2.3:-59992283 MS.gene74566:CDS
TCCTCTGGATTAGCTCGTGG+TGG 0.528379 2.3:-59991468 MS.gene74566:CDS
GCTCGTGGTGGGTCAAAAGA+TGG 0.528489 2.3:-59991456 MS.gene74566:CDS
CCCAATGGAATTGGCCATGA+GGG 0.531181 2.3:+59992291 None:intergenic
AGAAGATACTTCAGCAGCAA+TGG 0.536212 2.3:+59993172 None:intergenic
AAGTAAGTTGTGTTTAGTGT+TGG 0.540670 2.3:+59991804 None:intergenic
CAAAGTGATTAGGTGTGGTA+AGG 0.543295 2.3:+59991721 None:intergenic
TGATGCATGGAGGGTATGGT+TGG 0.543555 2.3:-59994101 MS.gene74566:CDS
CATGCGTGTTGTACTAGGGT+TGG 0.550754 2.3:-59994142 MS.gene74566:CDS
AAGCTATCCCTTCTTCCCAA+TGG 0.554508 2.3:+59992276 None:intergenic
TTGTACTAGGGTTGGCACTT+TGG 0.555400 2.3:-59994134 MS.gene74566:CDS
AAGTTGATCCAATGTAGAGA+AGG 0.557740 2.3:+59992212 None:intergenic
CATGTTTCACTGTAGAATGA+TGG 0.560211 2.3:+59994072 None:intergenic
CCAAACAGAAACTCATTAAG+GGG 0.561754 2.3:-59993272 MS.gene74566:CDS
ATCAGCACAAGAAACAGTGT+TGG 0.565621 2.3:+59993202 None:intergenic
TTGATCTATGAACAGGGAGG+AGG 0.566092 2.3:-59992315 MS.gene74566:intron
AAAGCTATTAACAATGGCAA+TGG 0.569604 2.3:+59991614 None:intergenic
GTTATCAAAGTGATTAGGTG+TGG 0.571420 2.3:+59991716 None:intergenic
TCAGCACAAGAAACAGTGTT+GGG 0.572608 2.3:+59993203 None:intergenic
ACCGATTCGGGGATCAGTGA+GGG 0.574096 2.3:+59994005 None:intergenic
AGTTGATCCAATGTAGAGAA+GGG 0.578999 2.3:+59992213 None:intergenic
TCTGCTAAAGCTATTAACAA+TGG 0.580549 2.3:+59991608 None:intergenic
GTGCATTTGTGATGCATGGA+GGG 0.581824 2.3:-59994110 MS.gene74566:CDS
TGCCACTGAAATTGTATAGA+CGG 0.584385 2.3:+59991841 None:intergenic
GTTCCATGCGTGTTGTACTA+GGG 0.589091 2.3:-59994146 MS.gene74566:CDS
TGGTAAGGTCCAAATTGGCT+AGG 0.596004 2.3:+59991736 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.3:-59992305 MS.gene74566:intron
AAAATGAAGCCTGATGAGAC+TGG 0.599915 2.3:+59993981 None:intergenic
AACTCCTCTGGATTAGCTCG+TGG 0.601383 2.3:-59991471 MS.gene74566:CDS
GAGTGTTAACTGGTGATGAA+GGG 0.609584 2.3:-59991527 MS.gene74566:CDS
TGTTTGTGATAGGGCTGCGA+TGG 0.615720 2.3:-59993347 MS.gene74566:intron
CCTCTGGATTAGCTCGTGGT+GGG 0.626315 2.3:-59991467 MS.gene74566:CDS
ATGAGACTGGCACCGATTCG+GGG 0.630611 2.3:+59993994 None:intergenic
AACCGTCTATACAATTTCAG+TGG 0.634780 2.3:-59991843 MS.gene74566:CDS
CAACCCTAGTACAACACGCA+TGG 0.644628 2.3:+59994143 None:intergenic
TGTGCATTTGTGATGCATGG+AGG 0.652684 2.3:-59994111 MS.gene74566:CDS
ATGTAGAGAAGGGTCCGGGA+AGG 0.656157 2.3:+59992223 None:intergenic
AGTGTTAACTGGTGATGAAG+GGG 0.656296 2.3:-59991526 MS.gene74566:CDS
CACCGATTCGGGGATCAGTG+AGG 0.657501 2.3:+59994004 None:intergenic
TCCCAATGGAATTGGCCATG+AGG 0.657766 2.3:+59992290 None:intergenic
AATGGTATCTGCATTAGGAG+TGG 0.670287 2.3:+59991632 None:intergenic
CCCACCACGAGCTAATCCAG+AGG 0.745474 2.3:+59991467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAGAAATTATTTATA+TGG + chr2.3:59991682-59991701 None:intergenic 10.0%
!! ATTTAAATAAAAAACTAACA+TGG - chr2.3:59992157-59992176 MS.gene74566:CDS 10.0%
!!! CATAGAAAATAAATTATTTT+AGG + chr2.3:59993152-59993171 None:intergenic 10.0%
!!! TAAATAATAGTTTTTTCTAA+TGG + chr2.3:59992933-59992952 None:intergenic 10.0%
!!! TAAATTTTTATTTTGTTTGT+AGG + chr2.3:59992011-59992030 None:intergenic 10.0%
!!! TAATGTTTTGTTTTTATATT+AGG - chr2.3:59992510-59992529 MS.gene74566:intron 10.0%
!! AAAAATGAATGTTCTTATAT+TGG - chr2.3:59991938-59991957 MS.gene74566:intron 15.0%
!! AAAATATACTATAAGTACAA+GGG - chr2.3:59992196-59992215 MS.gene74566:CDS 15.0%
!! AAAATGAATGTTCTTATATT+GGG - chr2.3:59991939-59991958 MS.gene74566:intron 15.0%
!! CCTAAGTATAAAAAAAAATT+AGG + chr2.3:59993684-59993703 None:intergenic 15.0%
!!! AAATTATTTTAGGTATTGAT+AGG + chr2.3:59993142-59993161 None:intergenic 15.0%
!!! ATAATTTTATCCATATAACT+AGG + chr2.3:59992480-59992499 None:intergenic 15.0%
!!! ATGACAAGATTTTAATTATT+GGG - chr2.3:59992095-59992114 MS.gene74566:intron 15.0%
!!! CCTAATTTTTTTTTATACTT+AGG - chr2.3:59993681-59993700 MS.gene74566:intron 15.0%
!! CAAAATATACTATAAGTACA+AGG - chr2.3:59992195-59992214 MS.gene74566:CDS 20.0%
!! TTAAAAAAGTAAGTTTGCAT+TGG + chr2.3:59992666-59992685 None:intergenic 20.0%
!!! GATGACAAGATTTTAATTAT+TGG - chr2.3:59992094-59992113 MS.gene74566:intron 20.0%
!!! TATTCCTTTTCTTTTTCTTT+TGG + chr2.3:59993088-59993107 None:intergenic 20.0%
!!! TATTTGTTATCAAAGTGATT+AGG + chr2.3:59993879-59993898 None:intergenic 20.0%
!!! TTGCAATGTAATTTTGTAAA+TGG - chr2.3:59994092-59994111 MS.gene74566:CDS 20.0%
!!! TTGGAACTTTATTTTATGAA+TGG + chr2.3:59992647-59992666 None:intergenic 20.0%
!!! TTTTCTTCTTCTTTTTTTAG+AGG - chr2.3:59991914-59991933 MS.gene74566:intron 20.0%
!!! TTTTTAGTGGTATTCAATAA+CGG - chr2.3:59991972-59991991 MS.gene74566:intron 20.0%
!!! TTTTTCATTACCTAGTTATA+TGG - chr2.3:59992467-59992486 MS.gene74566:intron 20.0%
! AAGTGAAAGAGATAAAAGAA+GGG + chr2.3:59992793-59992812 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2.3:59991554-59991573 None:intergenic 25.0%
! ACTTACCAATACATTCTAAA+AGG - chr2.3:59992613-59992632 MS.gene74566:intron 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.3:59991553-59991572 None:intergenic 25.0%
! ATCATAGCTCAAACTTTATA+TGG - chr2.3:59993196-59993215 MS.gene74566:CDS 25.0%
! ATGTATATTGATCTATGAAC+AGG - chr2.3:59993265-59993284 MS.gene74566:CDS 25.0%
! ATTTCTAACTTTCTTACACT+AGG - chr2.3:59991690-59991709 MS.gene74566:CDS 25.0%
! CATAGATCAATATACATTAG+AGG + chr2.3:59993262-59993281 None:intergenic 25.0%
! GTAACCAAAAGAAAAAGAAA+AGG - chr2.3:59993081-59993100 MS.gene74566:intron 25.0%
! TCAATTTCAAAGAAAGAAGT+AGG + chr2.3:59991731-59991750 None:intergenic 25.0%
! TCTCATGATTTCTTTCTATT+TGG - chr2.3:59992878-59992897 MS.gene74566:intron 25.0%
! TCTTTGCCTAAAATGATTAT+AGG - chr2.3:59991820-59991839 MS.gene74566:CDS 25.0%
! TGTATATTGATCTATGAACA+GGG - chr2.3:59993266-59993285 MS.gene74566:CDS 25.0%
!! ATCGAACCTATAATCATTTT+AGG + chr2.3:59991829-59991848 None:intergenic 25.0%
!! ATGGTGTATTGAGATTATTT+TGG + chr2.3:59992592-59992611 None:intergenic 25.0%
!! CTTCTTTTACTATACTGATA+TGG - chr2.3:59991773-59991792 MS.gene74566:CDS 25.0%
!! GAACGGTATAATGTTAATTT+TGG - chr2.3:59991749-59991768 MS.gene74566:CDS 25.0%
!! TAATTCAATAAGTTGACGTT+GGG + chr2.3:59992074-59992093 None:intergenic 25.0%
!!! ATAGAATGACTATTTTTGTG+AGG + chr2.3:59993552-59993571 None:intergenic 25.0%
!!! CTTCTTTCTTTGAAATTGAA+CGG - chr2.3:59991732-59991751 MS.gene74566:CDS 25.0%
!!! GTGATTTTTGACTTGAAAAA+TGG - chr2.3:59993655-59993674 MS.gene74566:intron 25.0%
!!! TAGAATGACTATTTTTGTGA+GGG + chr2.3:59993551-59993570 None:intergenic 25.0%
!!! TTATTTTGTTTGTAGGTCAT+TGG + chr2.3:59992004-59992023 None:intergenic 25.0%
!!! TTTTAATGAAGCTTTGTTGT+TGG + chr2.3:59993492-59993511 None:intergenic 25.0%
AAAGCTATTAACAATGGCAA+TGG + chr2.3:59993976-59993995 None:intergenic 30.0%
AAAGCTTCATTTCTTGTTCA+AGG - chr2.3:59993398-59993417 MS.gene74566:intron 30.0%
AAGGGATAAAACATTTGTCT+TGG + chr2.3:59992775-59992794 None:intergenic 30.0%
AAGTAAGTTGTGTTTAGTGT+TGG + chr2.3:59993786-59993805 None:intergenic 30.0%
ATGATTAGAATGGCGAATAT+TGG - chr2.3:59994038-59994057 MS.gene74566:CDS 30.0%
ATTTGCAAGAGTTATGTTTG+CGG + chr2.3:59993339-59993358 None:intergenic 30.0%
GAAGTGAAAGAGATAAAAGA+AGG + chr2.3:59992794-59992813 None:intergenic 30.0%
GTTTATGCATGTTTGTGATA+GGG - chr2.3:59992231-59992250 MS.gene74566:CDS 30.0%
TCCAAACAGAAACTCATTAA+GGG - chr2.3:59992314-59992333 MS.gene74566:intron 30.0%
TCTGCTAAAGCTATTAACAA+TGG + chr2.3:59993982-59994001 None:intergenic 30.0%
TGTTTATGCATGTTTGTGAT+AGG - chr2.3:59992230-59992249 MS.gene74566:CDS 30.0%
TTCCAAACAGAAACTCATTA+AGG - chr2.3:59992313-59992332 MS.gene74566:intron 30.0%
! AATTCTGAAAGAAGAGAGTT+TGG + chr2.3:59994007-59994026 None:intergenic 30.0%
! ACCAATACATTCTAAAAGGT+TGG - chr2.3:59992617-59992636 MS.gene74566:intron 30.0%
! CTAATTCAATAAGTTGACGT+TGG + chr2.3:59992075-59992094 None:intergenic 30.0%
! TACATTAGAGGACTTTAAGA+TGG + chr2.3:59993250-59993269 None:intergenic 30.0%
! TAGAATGTATTGGTAAGTGA+TGG + chr2.3:59992611-59992630 None:intergenic 30.0%
! TATCACGGTTGTTGTAATTT+TGG - chr2.3:59993601-59993620 MS.gene74566:intron 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.3:59991556-59991575 MS.gene74566:CDS 30.0%
! TTTAAGATGGACATTTGAGA+AGG + chr2.3:59993237-59993256 None:intergenic 30.0%
! TTTTGATCCCTCAATTATCA+CGG - chr2.3:59993586-59993605 MS.gene74566:intron 30.0%
!! TGCTGAAGTATCTTCTATTT+TGG - chr2.3:59992422-59992441 MS.gene74566:intron 30.0%
!! TTTTGGTGGATAGAGTATTT+TGG + chr2.3:59992575-59992594 None:intergenic 30.0%
!!! GTGTATTGAGATTATTTTGG+TGG + chr2.3:59992589-59992608 None:intergenic 30.0%
AAATCATGAGACCACAAAAC+CGG + chr2.3:59992869-59992888 None:intergenic 35.0%
AACACAATAGGGTATAGATC+TGG + chr2.3:59991542-59991561 None:intergenic 35.0%
AACCGTCTATACAATTTCAG+TGG - chr2.3:59993744-59993763 MS.gene74566:intron 35.0%
ACAACAACCGTGATAATTGA+GGG + chr2.3:59993596-59993615 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.3:59993431-59993450 MS.gene74566:intron 35.0%
AGTTGATCCAATGTAGAGAA+GGG + chr2.3:59993377-59993396 None:intergenic 35.0%
ATATTGATCTATGAACAGGG+AGG - chr2.3:59993269-59993288 MS.gene74566:CDS 35.0%
CATGTTTCACTGTAGAATGA+TGG + chr2.3:59991518-59991537 None:intergenic 35.0%
CCAAACAGAAACTCATTAAG+GGG - chr2.3:59992315-59992334 MS.gene74566:intron 35.0%
CTTCTCAAATAGACGAATTG+AGG + chr2.3:59991857-59991876 None:intergenic 35.0%
GAAGTAGGTTGTAATTGCAA+AGG + chr2.3:59991716-59991735 None:intergenic 35.0%
GAATGCTAGCGTAAAAAACA+TGG + chr2.3:59993634-59993653 None:intergenic 35.0%
GTTATCAAAGTGATTAGGTG+TGG + chr2.3:59993874-59993893 None:intergenic 35.0%
TACAACAACCGTGATAATTG+AGG + chr2.3:59993597-59993616 None:intergenic 35.0%
TACTTAGGTGCTCATACATT+TGG - chr2.3:59993696-59993715 MS.gene74566:intron 35.0%
TCCAATCTTCAAAACCTCAA+TGG - chr2.3:59993903-59993922 MS.gene74566:intron 35.0%
TGCCACTGAAATTGTATAGA+CGG + chr2.3:59993749-59993768 None:intergenic 35.0%
TTTGTAAATGGTAACTCCTC+TGG - chr2.3:59994104-59994123 MS.gene74566:CDS 35.0%
! AAGTTGATCCAATGTAGAGA+AGG + chr2.3:59993378-59993397 None:intergenic 35.0%
! TTGTTTCCTGTTGAGTTTTG+GGG + chr2.3:59993831-59993850 None:intergenic 35.0%
!! GGGCTCATAAAGATTTTTAG+TGG - chr2.3:59991959-59991978 MS.gene74566:intron 35.0%
!! GGTTGTTGTAATTTTGGTCT+CGG - chr2.3:59993607-59993626 MS.gene74566:intron 35.0%
!! GTTGTTTCCTGTTGAGTTTT+GGG + chr2.3:59993832-59993851 None:intergenic 35.0%
!!! GCCAACCTTTTAGAATGTAT+TGG + chr2.3:59992621-59992640 None:intergenic 35.0%
AAAATGAAGCCTGATGAGAC+TGG + chr2.3:59991609-59991628 None:intergenic 40.0%
AATGGTATCTGCATTAGGAG+TGG + chr2.3:59993958-59993977 None:intergenic 40.0%
AGAAGATACTTCAGCAGCAA+TGG + chr2.3:59992418-59992437 None:intergenic 40.0%
AGGAAACAACCTAGCCAATT+TGG - chr2.3:59993842-59993861 MS.gene74566:intron 40.0%
ATATGTCCCCAAAACTCAAC+AGG - chr2.3:59993822-59993841 MS.gene74566:intron 40.0%
ATCAGCACAAGAAACAGTGT+TGG + chr2.3:59992388-59992407 None:intergenic 40.0%
ATGGCAATGGTATCTGCATT+AGG + chr2.3:59993963-59993982 None:intergenic 40.0%
CAAAGTGATTAGGTGTGGTA+AGG + chr2.3:59993869-59993888 None:intergenic 40.0%
CAGAAACTCATTAAGGGGTT+TGG - chr2.3:59992320-59992339 MS.gene74566:intron 40.0%
CCCCTTAATGAGTTTCTGTT+TGG + chr2.3:59992318-59992337 None:intergenic 40.0%
CTATACAATTTCAGTGGCAC+TGG - chr2.3:59993750-59993769 MS.gene74566:intron 40.0%
CTTGCAAATCAAAACCTTCC+CGG - chr2.3:59993350-59993369 MS.gene74566:intron 40.0%
TCAGCACAAGAAACAGTGTT+GGG + chr2.3:59992387-59992406 None:intergenic 40.0%
! AGTGTTAACTGGTGATGAAG+GGG - chr2.3:59994061-59994080 MS.gene74566:CDS 40.0%
! GAGTGTTAACTGGTGATGAA+GGG - chr2.3:59994060-59994079 MS.gene74566:CDS 40.0%
! GCGAATATTGGAGTGTTAAC+TGG - chr2.3:59994050-59994069 MS.gene74566:CDS 40.0%
! GTTGTGTTTAGTGTTGGATC+AGG + chr2.3:59993780-59993799 None:intergenic 40.0%
! TAGCGTGTCGATGATTAGAA+TGG - chr2.3:59994028-59994047 MS.gene74566:CDS 40.0%
!! CTTGTTGTTGAGTTGACAGA+AGG + chr2.3:59992846-59992865 None:intergenic 40.0%
!! GGTTGTTTCCTGTTGAGTTT+TGG + chr2.3:59993833-59993852 None:intergenic 40.0%
!!! GCCATTGAGGTTTTGAAGAT+TGG + chr2.3:59993907-59993926 None:intergenic 40.0%
AAGCTATCCCTTCTTCCCAA+TGG + chr2.3:59993314-59993333 None:intergenic 45.0%
AGGTGTGGTAAGGTCCAAAT+TGG + chr2.3:59993859-59993878 None:intergenic 45.0%
ATCCAATGTAGAGAAGGGTC+CGG + chr2.3:59993372-59993391 None:intergenic 45.0%
CACTTCGAAGTAAGCCATTG+AGG + chr2.3:59993920-59993939 None:intergenic 45.0%
CTGTCAACTCAACAACAAGC+CGG - chr2.3:59992847-59992866 MS.gene74566:intron 45.0%
GCCAATTCCATTGGGAAGAA+GGG - chr2.3:59993304-59993323 MS.gene74566:CDS 45.0%
GTGCATTTGTGATGCATGGA+GGG - chr2.3:59991477-59991496 MS.gene74566:CDS 45.0%
GTTCCATGCGTGTTGTACTA+GGG - chr2.3:59991441-59991460 MS.gene74566:CDS 45.0%
TCCCTTCTTCCCAATGGAAT+TGG + chr2.3:59993308-59993327 None:intergenic 45.0%
TGCATCTTGCGGAGGAAATT+GGG + chr2.3:59992749-59992768 None:intergenic 45.0%
TGGTAAGGTCCAAATTGGCT+AGG + chr2.3:59993854-59993873 None:intergenic 45.0%
TGGTGTGCATTTGTGATGCA+TGG - chr2.3:59991473-59991492 MS.gene74566:CDS 45.0%
TGTGCATTTGTGATGCATGG+AGG - chr2.3:59991476-59991495 MS.gene74566:CDS 45.0%
TTGATCTATGAACAGGGAGG+AGG - chr2.3:59993272-59993291 MS.gene74566:CDS 45.0%
TTTGTGATGCATGGAGGGTA+TGG - chr2.3:59991482-59991501 MS.gene74566:CDS 45.0%
! CTGGTGATGAAGGGGAAATT+AGG - chr2.3:59994069-59994088 MS.gene74566:CDS 45.0%
! GGAGTGTTAACTGGTGATGA+AGG - chr2.3:59994059-59994078 MS.gene74566:CDS 45.0%
! TGTCTTGGAAGTGCATCTTG+CGG + chr2.3:59992760-59992779 None:intergenic 45.0%
! TTGTACTAGGGTTGGCACTT+TGG - chr2.3:59991453-59991472 MS.gene74566:CDS 45.0%
!! GAGTTGACAGAAGGTGTTGT+GGG + chr2.3:59992837-59992856 None:intergenic 45.0%
!! TCAACAACAAGCCGGTTTTG+TGG - chr2.3:59992855-59992874 MS.gene74566:intron 45.0%
!! TGAGTTGACAGAAGGTGTTG+TGG + chr2.3:59992838-59992857 None:intergenic 45.0%
!! AAAAACTTATAAAATAAATA+AGG - chr2.3:59992719-59992738 MS.gene74566:intron 5.0%
CAACCCTAGTACAACACGCA+TGG + chr2.3:59991447-59991466 None:intergenic 50.0%
CATGCGTGTTGTACTAGGGT+TGG - chr2.3:59991445-59991464 MS.gene74566:CDS 50.0%
CCCAATGGAATTGGCCATGA+GGG + chr2.3:59993299-59993318 None:intergenic 50.0%
CCCTCATGGCCAATTCCATT+GGG - chr2.3:59993296-59993315 MS.gene74566:CDS 50.0%
GGCCAATTCCATTGGGAAGA+AGG - chr2.3:59993303-59993322 MS.gene74566:CDS 50.0%
GGTTCCATGCGTGTTGTACT+AGG - chr2.3:59991440-59991459 MS.gene74566:CDS 50.0%
GTGCATCTTGCGGAGGAAAT+TGG + chr2.3:59992750-59992769 None:intergenic 50.0%
TCCAATGTAGAGAAGGGTCC+GGG + chr2.3:59993371-59993390 None:intergenic 50.0%
TCCCAATGGAATTGGCCATG+AGG + chr2.3:59993300-59993319 None:intergenic 50.0%
TCCCTCATGGCCAATTCCAT+TGG - chr2.3:59993295-59993314 MS.gene74566:CDS 50.0%
TGTTTGTGATAGGGCTGCGA+TGG - chr2.3:59992240-59992259 MS.gene74566:CDS 50.0%
! TGATGCATGGAGGGTATGGT+TGG - chr2.3:59991486-59991505 MS.gene74566:CDS 50.0%
!! AACTCCTCTGGATTAGCTCG+TGG - chr2.3:59994116-59994135 MS.gene74566:CDS 50.0%
!! TGATGAGACTGGCACCGATT+CGG + chr2.3:59991598-59991617 None:intergenic 50.0%
ATGTAGAGAAGGGTCCGGGA+AGG + chr2.3:59993367-59993386 None:intergenic 55.0%
TCCCGGACCCTTCTCTACAT+TGG - chr2.3:59993367-59993386 MS.gene74566:intron 55.0%
TCCCTCACTGATCCCCGAAT+CGG - chr2.3:59991581-59991600 MS.gene74566:CDS 55.0%
! CTTGGAAGTGCATCTTGCGG+AGG + chr2.3:59992757-59992776 None:intergenic 55.0%
!! ACCGATTCGGGGATCAGTGA+GGG + chr2.3:59991585-59991604 None:intergenic 55.0%
!! ATGAGACTGGCACCGATTCG+GGG + chr2.3:59991596-59991615 None:intergenic 55.0%
!! CCTCTGGATTAGCTCGTGGT+GGG - chr2.3:59994120-59994139 MS.gene74566:CDS 55.0%
!! GAATCGGTGCCAGTCTCATC+AGG - chr2.3:59991597-59991616 MS.gene74566:CDS 55.0%
!! GATGAGACTGGCACCGATTC+GGG + chr2.3:59991597-59991616 None:intergenic 55.0%
!! GCTCGTGGTGGGTCAAAAGA+TGG - chr2.3:59994131-59994150 MS.gene74566:CDS 55.0%
!! TCCTCTGGATTAGCTCGTGG+TGG - chr2.3:59994119-59994138 MS.gene74566:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.3:59993282-59993301 MS.gene74566:CDS 60.0%
CCCACCACGAGCTAATCCAG+AGG + chr2.3:59994123-59994142 None:intergenic 60.0%
!! CACCGATTCGGGGATCAGTG+AGG + chr2.3:59991586-59991605 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 59991437 59994172 59991437 ID=MS.gene74566
chr2.3 mRNA 59991437 59994172 59991437 ID=MS.gene74566.t1;Parent=MS.gene74566
chr2.3 exon 59993963 59994172 59993963 ID=MS.gene74566.t1.exon1;Parent=MS.gene74566.t1
chr2.3 CDS 59993963 59994172 59993963 ID=cds.MS.gene74566.t1;Parent=MS.gene74566.t1
chr2.3 exon 59993166 59993357 59993166 ID=MS.gene74566.t1.exon2;Parent=MS.gene74566.t1
chr2.3 CDS 59993166 59993357 59993166 ID=cds.MS.gene74566.t1;Parent=MS.gene74566.t1
chr2.3 exon 59992157 59992322 59992157 ID=MS.gene74566.t1.exon3;Parent=MS.gene74566.t1
chr2.3 CDS 59992157 59992322 59992157 ID=cds.MS.gene74566.t1;Parent=MS.gene74566.t1
chr2.3 exon 59991437 59991906 59991437 ID=MS.gene74566.t1.exon4;Parent=MS.gene74566.t1
chr2.3 CDS 59991437 59991906 59991437 ID=cds.MS.gene74566.t1;Parent=MS.gene74566.t1
Gene Sequence

>MS.gene74566

ATGGGTTCCATGCGTGTTGTACTAGGGTTGGCACTTTGGTGTGCATTTGTGATGCATGGAGGGTATGGTTGGCTCAGTCCATCATTCTACAGTGAAACATGTCCAGATCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATCGGTGCCAGTCTCATCAGGCTTCATTTTCACGATTGCTTTGTTCAAGTATGTTATTATCTATAGATTGTTATGTTCATCCATATAAATAATTTCTAACTTTCTTACACTAGGCCTTTGCAATTACAACCTACTTCTTTCTTTGAAATTGAACGGTATAATGTTAATTTTGGACTTCTTTTACTATACTGATATGGTGTTGAAAAGTTTAGTAACAAAGTTCTTTGCCTAAAATGATTATAGGTTCGATCGATTCCTCAATTCGTCTATTTGAGAAGAAGTTTGATCATGTGTGTAGATTAAAAATGAACGTTCTTTTCTTCTTCTTTTTTTAGAGGAAAAAATGAATGTTCTTATATTGGGCTCATAAAGATTTTTAGTGGTATTCAATAACGGAATATACCAATGACCTACAAACAAAATAAAAATTTAAATATGATTTTAGTCAATGCATTATAGTTTTTTTTTTAATCCCAACGTCAACTTATTGAATTAGATGACAAGATTTTAATTATTGGGTGAGTGACTAAGAACAATTTTAACAATTGTAAAGACAAAATTTAAATAAAAAACTAACATGGAATAAAAATTAAAATCAAAATATACTATAAGTACAAGGGCTTATGCATGTTGTTTATGCATGTTTGTGATAGGGCTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACAGAAACTCATTAAGGGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAGAAGAATGTCCCAACACTGTTTCTTGTGCTGATATTCTTACCATTGCTGCTGAAGTATCTTCTATTTTGGTATGTTTTTAATTTCATCAACTTTTTTCATTACCTAGTTATATGGATAAAATTATTTTAAAATTTTAATGTTTTGTTTTTATATTAGGAGCTTTGTTTTTTTAACATCAAACAAAATTTTATATTCACCAAAATACTCTATCCACCAAAATAATCTCAATACACCATCACTTACCAATACATTCTAAAAGGTTGGCATACCATTCATAAAATAAAGTTCCAATGCAAACTTACTTTTTTAAATTTATTAACATATGCAAATTTGCATATGATAAAAAAACTTATAAAATAAATAAGGATATCCCAATTTCCTCCGCAAGATGCACTTCCAAGACAAATGTTTTATCCCTTCTTTTATCTCTTTCACTTCTGCATGTTTTGTACAAATTGCCCACAACACCTTCTGTCAACTCAACAACAAGCCGGTTTTGTGGTCTCATGATTTCTTTCTATTTGGTTGAGTTGTACTCTTTTAATATTCATTTGCCATTAGAAAAAACTATTATTTACATATGAATTTTTTTAATTAAATATAGTGAATTTTTTATTGTGATTAATAATTTTGAGCAATTATCTTTCAAACTTTTTTTGAGCAATTATCTCTCAAACTTTTTTTGAGCAATAAGAAATAGTTTTTGTAACCAAAAGAAAAAGAAAAGGAATAGTTTCACTAAGTAATTTATTTATTTTCTATGCCTATCAATACCTAAAATAATTTATTTTCTATGATTTTAATTATATATATAATTAAAATCATAGCTCAAACTTTATATGGTCACTTATAATTTTTCCTTCTCAAATGTCCATCTTAAAGTCCTCTAATGTATATTGATCTATGAACAGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGGGATAGCTTAACCGCAAACATAACTCTTGCAAATCAAAACCTTCCCGGACCCTTCTCTACATTGGATCAACTTAAAGCTTCATTTCTTGTTCAAGGTCTCAACACTACAGATTTAGTTACACTCTCAGGTATAATATTACACATAATCATCAATTTAATATTTACCAACAACAAAGCTTCATTAAAAATAGATTTATGCACTTTTAATTCTCATATTTTATTACCCTCACAAAAATAGTCATTCTATTTTAAAATAAATTTTTTTGATCCCTCAATTATCACGGTTGTTGTAATTTTGGTCTCGGTCCATGTTTTTTACGCTAGCATTCTGTGATTTTTGACTTGAAAAATGGTGACCTAATTTTTTTTTATACTTAGGTGCTCATACATTTGGAAGAGCTCGTTGCAGTACATTCATCAACCGTCTATACAATTTCAGTGGCACTGGAAATCCTGATCCAACACTAAACACAACTTACTTACAAACATTGCGTCTGATATGTCCCCAAAACTCAACAGGAAACAACCTAGCCAATTTGGACCTTACCACACCTAATCACTTTGATAACAAATATTACTCCAATCTTCAAAACCTCAATGGCTTACTTCGAAGTGATCAAGTGCTATTCTCCACTCCTAATGCAGATACCATTGCCATTGTTAATAGCTTTAGCAGAAACCAAACTCTCTTCTTTCAGAATTTTAGCGTGTCGATGATTAGAATGGCGAATATTGGAGTGTTAACTGGTGATGAAGGGGAAATTAGGTTGCAATGTAATTTTGTAAATGGTAACTCCTCTGGATTAGCTCGTGGTGGGTCAAAAGATGGCTTGTTAAGCTCACTCTAA
Protein sequence

>MS.gene74566.t1

MGSMRVVLGLALWCAFVMHGGYGWLSPSFYSETCPDLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNRNSLRGLDVVNQIKTAVEEECPNTVSCADILTIAAEVSSILGGGPSWPIPLGRRDSLTANITLANQNLPGPFSTLDQLKASFLVQGLNTTDLVTLSGAHTFGRARCSTFINRLYNFSGTGNPDPTLNTTYLQTLRLICPQNSTGNNLANLDLTTPNHFDNKYYSNLQNLNGLLRSDQVLFSTPNADTIAIVNSFSRNQTLFFQNFSVSMIRMANIGVLTGDEGEIRLQCNFVNGNSSGLARGGSKDGLLSSL