AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02086

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02086.t1 MTR_2g029860 97.167 353 7 1 1 350 1 353 0.0 690
MS.gene02086.t1 MTR_2g029850 78.531 354 70 4 1 350 1 352 0.0 543
MS.gene02086.t1 MTR_2g029820 71.148 357 94 5 1 350 1 355 7.17e-180 502
MS.gene02086.t1 MTR_2g029815 70.822 353 99 3 1 350 1 352 2.14e-178 498
MS.gene02086.t1 MTR_2g029800 69.774 354 102 3 1 350 1 353 1.53e-175 491
MS.gene02086.t1 MTR_2g029910 71.714 350 91 5 6 350 7 353 1.63e-172 484
MS.gene02086.t1 MTR_2g029830 69.143 350 101 2 6 348 4 353 4.85e-170 477
MS.gene02086.t1 MTR_2g028980 67.606 355 108 5 1 349 1 354 8.04e-166 467
MS.gene02086.t1 MTR_2g029740 66.479 355 112 3 1 349 1 354 3.14e-164 462
MS.gene02086.t1 MTR_2g029750 65.634 355 116 4 1 350 1 354 3.57e-162 457
MS.gene02086.t1 MTR_2g029560 62.644 348 125 1 1 348 1 343 1.75e-153 435
MS.gene02086.t1 MTR_2g029730 62.974 343 121 2 8 350 9 345 2.95e-146 417
MS.gene02086.t1 MTR_2g029830 71.530 281 74 1 74 348 5 285 2.42e-142 404
MS.gene02086.t1 MTR_7g093370 59.006 322 128 2 11 331 54 372 5.38e-131 379
MS.gene02086.t1 MTR_1g054205 58.410 327 134 2 6 331 2 327 5.60e-128 370
MS.gene02086.t1 MTR_8g076820 50.000 302 150 1 29 330 30 330 1.45e-102 305
MS.gene02086.t1 MTR_4g125940 51.077 325 152 3 11 330 7 329 2.17e-102 305
MS.gene02086.t1 MTR_5g021060 49.669 302 151 1 29 330 30 330 3.83e-102 304
MS.gene02086.t1 MTR_7g072510 47.003 317 159 2 14 330 5 312 2.63e-100 299
MS.gene02086.t1 MTR_3g094650 51.051 333 149 5 1 330 1 322 4.11e-100 298
MS.gene02086.t1 MTR_2g040000 50.000 306 148 2 28 330 28 331 5.57e-100 298
MS.gene02086.t1 MTR_5g017850 47.634 317 162 3 15 330 13 326 1.03e-97 293
MS.gene02086.t1 MTR_4g083710 49.688 320 149 4 14 330 14 324 1.66e-97 292
MS.gene02086.t1 MTR_3g072190 47.975 321 154 3 14 330 7 318 1.74e-96 289
MS.gene02086.t1 MTR_2g084080 48.039 306 150 2 25 330 21 317 2.07e-96 289
MS.gene02086.t1 MTR_2g084000 48.525 305 149 2 26 330 23 319 2.63e-96 289
MS.gene02086.t1 MTR_5g083860 48.137 322 153 4 11 330 16 325 3.89e-96 288
MS.gene02086.t1 MTR_5g017860 47.634 317 162 3 15 330 13 326 6.41e-96 288
MS.gene02086.t1 MTR_4g029170 47.516 322 156 5 11 330 11 321 1.50e-95 287
MS.gene02086.t1 MTR_3g466200 48.125 320 151 5 14 330 13 320 1.73e-95 287
MS.gene02086.t1 MTR_2g084090 47.883 307 150 3 25 330 21 318 4.12e-95 286
MS.gene02086.t1 MTR_4g029200 45.833 336 155 3 13 330 12 338 5.77e-95 286
MS.gene02086.t1 MTR_1g022970 48.013 302 157 0 29 330 46 347 1.73e-94 285
MS.gene02086.t1 MTR_2g084110 47.712 306 151 2 25 330 21 317 2.82e-94 283
MS.gene02086.t1 MTR_7g072480 47.634 317 154 3 14 330 12 316 3.74e-94 283
MS.gene02086.t1 MTR_4g125940 54.545 275 121 2 58 330 2 274 5.11e-94 281
MS.gene02086.t1 MTR_2g084020 47.059 306 154 2 25 330 21 318 2.56e-93 281
MS.gene02086.t1 MTR_2g084010 47.712 306 152 2 25 330 21 318 3.95e-93 281
MS.gene02086.t1 MTR_4g074995 48.438 320 140 5 14 330 11 308 1.32e-92 279
MS.gene02086.t1 MTR_3g094670 50.000 324 149 4 9 330 10 322 2.22e-92 279
MS.gene02086.t1 MTR_4g029180 47.667 300 146 4 33 330 31 321 3.98e-91 276
MS.gene02086.t1 MTR_2g029880 66.047 215 58 4 139 350 7 209 1.82e-90 270
MS.gene02086.t1 MTR_5g074970 46.224 331 160 6 6 330 8 326 3.48e-90 273
MS.gene02086.t1 MTR_3g094630 49.249 333 155 5 1 330 1 322 3.81e-90 273
MS.gene02086.t1 MTR_4g029190 46.795 312 154 4 22 330 38 340 1.00e-89 273
MS.gene02086.t1 MTR_4g122640 44.272 323 175 3 9 330 18 336 3.40e-89 271
MS.gene02086.t1 MTR_5g014100 46.535 303 158 2 32 330 29 331 3.51e-88 268
MS.gene02086.t1 MTR_4g074990 46.708 319 144 3 15 330 10 305 5.15e-88 267
MS.gene02086.t1 MTR_5g074760 45.631 309 157 4 27 332 23 323 2.70e-87 266
MS.gene02086.t1 MTR_5g074740 45.603 307 156 4 27 330 23 321 2.73e-87 266
MS.gene02086.t1 MTR_5g074860 44.062 320 168 4 14 330 14 325 1.25e-85 262
MS.gene02086.t1 MTR_3g467600 45.307 309 159 3 25 330 23 324 4.90e-85 260
MS.gene02086.t1 MTR_5g074710 45.603 307 156 4 27 330 23 321 7.49e-85 259
MS.gene02086.t1 MTR_3g092990 40.785 331 190 3 1 330 1 326 7.96e-85 259
MS.gene02086.t1 MTR_3g466180 43.038 316 170 3 16 330 17 323 4.43e-84 258
MS.gene02086.t1 MTR_1g115900 43.034 323 172 5 11 331 10 322 4.63e-84 258
MS.gene02086.t1 MTR_2g088770 45.130 308 163 5 25 330 22 325 1.22e-83 257
MS.gene02086.t1 MTR_7g107520 44.164 317 169 5 14 330 12 320 6.12e-83 254
MS.gene02086.t1 MTR_5g049280 42.949 312 169 4 25 330 29 337 2.92e-82 253
MS.gene02086.t1 MTR_4g114210 42.991 321 170 7 16 330 7 320 5.40e-82 252
MS.gene02086.t1 MTR_1g101830 42.453 318 175 5 14 330 12 322 1.73e-81 251
MS.gene02086.t1 MTR_4g074980 45.426 317 140 6 14 330 11 294 4.32e-81 249
MS.gene02086.t1 MTR_4g046713 42.368 321 181 3 11 330 9 326 5.37e-81 250
MS.gene02086.t1 MTR_4g031140 39.564 321 185 4 29 349 28 339 5.67e-81 250
MS.gene02086.t1 MTR_2g008710 42.553 329 177 6 6 330 5 325 5.63e-80 247
MS.gene02086.t1 MTR_4g030890 41.503 306 174 3 25 330 96 396 6.44e-80 250
MS.gene02086.t1 MTR_5g022870 41.456 316 175 7 16 330 10 316 2.66e-79 245
MS.gene02086.t1 MTR_3g072190 49.035 259 123 2 72 330 2 251 6.08e-79 242
MS.gene02086.t1 MTR_5g016010 41.234 308 176 3 25 329 23 328 5.04e-77 240
MS.gene02086.t1 MTR_1g086320 40.385 312 176 4 25 330 26 333 1.67e-76 239
MS.gene02086.t1 MTR_4g074980 48.800 250 118 3 14 260 11 253 6.25e-75 232
MS.gene02086.t1 MTR_8g075100 41.584 303 167 7 29 330 26 319 1.21e-74 233
MS.gene02086.t1 MTR_4g133800 42.953 298 159 6 34 330 46 333 3.88e-74 233
MS.gene02086.t1 MTR_6g043280 41.056 341 168 8 11 330 4 332 9.64e-74 231
MS.gene02086.t1 MTR_1g009750 42.157 306 171 4 28 330 26 328 1.06e-73 231
MS.gene02086.t1 MTR_1g086490 39.748 317 178 4 25 330 26 340 1.29e-73 231
MS.gene02086.t1 MTR_7g086820 38.835 309 180 5 22 330 13 312 2.15e-73 230
MS.gene02086.t1 MTR_4g132490 40.000 320 181 5 17 330 13 327 1.71e-72 228
MS.gene02086.t1 MTR_4g127670 42.484 306 168 4 28 330 23 323 3.31e-72 227
MS.gene02086.t1 MTR_3g092990 38.671 331 186 4 1 330 1 315 3.59e-72 227
MS.gene02086.t1 MTR_1g025980 40.397 302 173 4 29 330 24 318 5.00e-72 227
MS.gene02086.t1 MTR_4g095450 41.987 312 170 5 22 329 19 323 5.86e-72 227
MS.gene02086.t1 MTR_7g026990 38.782 312 180 4 21 331 22 323 1.42e-71 226
MS.gene02086.t1 MTR_7g029030 41.694 307 165 4 28 330 24 320 3.01e-71 225
MS.gene02086.t1 MTR_6g043240 44.548 321 159 10 29 346 42 346 4.07e-71 225
MS.gene02086.t1 MTR_2g437770 41.196 301 165 6 32 331 53 342 1.26e-70 224
MS.gene02086.t1 MTR_0155s0040 38.033 305 176 5 26 330 24 315 3.07e-70 222
MS.gene02086.t1 MTR_1g090760 36.728 324 194 5 14 330 11 330 1.39e-68 218
MS.gene02086.t1 MTR_1g077000 38.079 302 174 5 29 330 39 327 2.96e-68 217
MS.gene02086.t1 MTR_2g008160 41.158 311 171 7 25 330 20 323 3.67e-68 217
MS.gene02086.t1 MTR_6g027440 39.185 319 182 6 14 330 6 314 3.01e-66 212
MS.gene02086.t1 MTR_4g087965 38.689 305 180 5 28 327 41 343 4.87e-66 212
MS.gene02086.t1 MTR_5g074860 38.125 320 148 4 14 330 14 286 1.83e-65 209
MS.gene02086.t1 MTR_1g038680 38.411 302 180 4 33 330 33 332 7.63e-65 209
MS.gene02086.t1 MTR_7g086870 38.689 305 169 7 29 330 22 311 1.55e-64 207
MS.gene02086.t1 MTR_6g043460 40.575 313 171 7 29 338 36 336 5.26e-64 207
MS.gene02086.t1 MTR_2g099175 35.556 315 185 6 24 330 31 335 9.28e-64 206
MS.gene02086.t1 MTR_1g009750 38.889 306 164 5 28 330 26 311 1.67e-63 204
MS.gene02086.t1 MTR_3g105790 39.752 322 183 5 11 330 10 322 5.09e-63 204
MS.gene02086.t1 MTR_8g062780 35.897 312 192 4 23 330 17 324 1.02e-62 203
MS.gene02086.t1 MTR_2g067440 34.670 349 187 6 18 329 42 386 1.63e-62 204
MS.gene02086.t1 MTR_5g033470 35.556 315 190 7 24 330 68 377 1.82e-59 196
MS.gene02086.t1 MTR_2g008730 39.404 302 148 5 33 330 31 301 8.71e-59 192
MS.gene02086.t1 MTR_2g077990 34.835 333 182 6 29 329 76 405 5.25e-58 193
MS.gene02086.t1 MTR_2g078610 34.234 333 184 6 29 329 76 405 2.07e-57 192
MS.gene02086.t1 MTR_0147s0010 33.951 324 178 5 26 329 74 381 1.95e-55 186
MS.gene02086.t1 MTR_0286s0010 34.891 321 200 6 14 330 19 334 3.33e-54 181
MS.gene02086.t1 MTR_6g008075 34.891 321 200 6 14 330 19 334 3.33e-54 181
MS.gene02086.t1 MTR_2g078280 35.000 320 173 6 29 316 76 392 9.01e-54 182
MS.gene02086.t1 MTR_2g008160 36.334 311 151 7 25 330 20 288 2.97e-52 175
MS.gene02086.t1 MTR_2g067450 35.526 304 188 5 29 329 11 309 4.85e-51 172
MS.gene02086.t1 MTR_1g066710 33.548 310 195 4 26 332 24 325 1.18e-50 172
MS.gene02086.t1 MTR_1g066680 33.013 312 193 6 26 332 24 324 6.52e-47 162
MS.gene02086.t1 MTR_1g066380 33.010 309 196 4 27 332 25 325 8.00e-47 162
MS.gene02086.t1 MTR_5g074700 40.086 232 114 5 102 330 5 214 1.71e-46 157
MS.gene02086.t1 MTR_1g066640 33.548 310 195 4 26 332 24 325 1.79e-46 160
MS.gene02086.t1 MTR_3g072210 46.073 191 94 3 141 330 56 238 7.89e-46 156
MS.gene02086.t1 MTR_4g132110 31.515 330 214 5 4 330 8 328 2.65e-45 158
MS.gene02086.t1 MTR_3g105790 41.152 243 138 3 90 330 7 246 4.21e-45 155
MS.gene02086.t1 MTR_4g132110 31.642 335 212 7 4 330 8 333 1.17e-44 156
MS.gene02086.t1 MTR_7g072490 39.759 249 87 4 75 323 2 187 2.08e-43 149
MS.gene02086.t1 MTR_2g008160 44.118 170 91 3 25 194 20 185 1.66e-41 144
MS.gene02086.t1 MTR_1g066380 34.601 263 161 4 73 332 3 257 3.61e-39 140
MS.gene02086.t1 MTR_3g072260 48.837 129 62 1 9 133 2 130 1.76e-34 124
MS.gene02086.t1 MTR_2g029930 53.982 113 23 4 15 112 4 102 1.28e-28 107
MS.gene02086.t1 MTR_2g077980 29.496 278 152 9 91 329 11 283 8.92e-28 110
MS.gene02086.t1 MTR_2g078560 29.148 223 125 4 138 329 99 319 1.62e-25 105
MS.gene02086.t1 MTR_5g058120 36.813 182 102 4 164 345 6 174 4.13e-23 97.1
MS.gene02086.t1 MTR_7g086790 32.308 195 110 4 76 270 17 189 2.55e-22 93.2
MS.gene02086.t1 MTR_1g098320 48.864 88 43 1 251 338 47 132 3.74e-21 88.6
MS.gene02086.t1 MTR_3g462850 36.806 144 82 4 193 330 9 149 6.45e-20 85.5
MS.gene02086.t1 MTR_1g089005 38.060 134 67 5 16 141 6 131 6.53e-17 77.4
MS.gene02086.t1 MTR_3g107060 27.519 258 131 9 63 314 108 315 3.54e-16 78.6
MS.gene02086.t1 MTR_7g107500 46.465 99 49 3 232 330 3 97 4.47e-16 73.2
MS.gene02086.t1 MTR_4g012865 46.479 71 38 0 26 96 74 144 5.67e-16 74.7
MS.gene02086.t1 MTR_4g114220 49.367 79 30 2 55 133 29 97 8.15e-16 73.9
MS.gene02086.t1 MTR_5g074770 42.529 87 49 1 243 329 23 108 2.23e-15 71.6
MS.gene02086.t1 MTR_6g048160 52.941 68 28 2 68 135 22 85 4.14e-15 70.5
MS.gene02086.t1 MTR_4g031040 29.714 175 79 3 88 262 1 131 6.04e-14 68.6
MS.gene02086.t1 MTR_7g086810 32.231 121 56 1 27 147 4 98 7.24e-13 67.8
MS.gene02086.t1 MTR_7g086785 30.882 136 87 3 74 206 3 134 5.69e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02086.t1 AT5G06730 60.968 310 121 0 25 334 29 338 3.31e-130 377
MS.gene02086.t1 AT5G06720 59.609 307 124 0 25 331 28 334 4.51e-127 368
MS.gene02086.t1 AT3G32980 57.556 311 130 2 25 333 27 337 1.68e-123 359
MS.gene02086.t1 AT2G38380 51.705 352 160 3 4 349 1 348 4.28e-123 358
MS.gene02086.t1 AT3G49110 57.372 312 131 2 24 333 28 339 2.09e-122 357
MS.gene02086.t1 AT3G49120 56.731 312 133 2 24 333 27 338 1.11e-120 352
MS.gene02086.t1 AT2G38390 50.852 352 163 3 4 349 1 348 3.10e-119 348
MS.gene02086.t1 AT4G08770 53.211 327 148 3 22 346 17 340 2.70e-118 346
MS.gene02086.t1 AT4G08780 52.188 320 151 2 22 339 17 336 2.43e-115 338
MS.gene02086.t1 AT5G19880 50.606 330 159 3 4 330 1 329 5.46e-108 319
MS.gene02086.t1 AT2G18140 49.338 302 152 1 29 330 35 335 6.40e-102 304
MS.gene02086.t1 AT2G18150 49.669 302 151 1 29 330 36 336 1.24e-101 303
MS.gene02086.t1 AT5G66390 47.619 315 164 1 16 330 20 333 5.45e-101 301
MS.gene02086.t1 AT1G44970 50.321 312 153 1 19 330 37 346 1.24e-100 301
MS.gene02086.t1 AT5G19890 50.327 306 144 4 27 330 28 327 1.61e-98 295
MS.gene02086.t1 AT4G36430 48.185 303 156 1 28 330 29 330 2.20e-98 295
MS.gene02086.t1 AT3G50990 48.052 308 159 1 25 332 37 343 5.40e-97 291
MS.gene02086.t1 AT4G16270 47.525 303 154 4 29 330 50 348 6.90e-94 284
MS.gene02086.t1 AT5G05340 49.346 306 144 3 27 330 28 324 7.66e-94 283
MS.gene02086.t1 AT1G14550 47.712 306 152 3 26 330 23 321 9.43e-93 280
MS.gene02086.t1 AT1G14540 46.372 317 163 2 14 330 6 315 1.18e-91 277
MS.gene02086.t1 AT1G68850 42.308 312 176 3 23 330 24 335 2.77e-86 264
MS.gene02086.t1 AT1G49570 45.847 301 158 3 29 326 48 346 1.13e-85 263
MS.gene02086.t1 AT2G35380 47.020 302 156 3 33 330 34 335 5.22e-85 261
MS.gene02086.t1 AT5G58400 45.062 324 165 5 10 330 12 325 2.35e-83 256
MS.gene02086.t1 AT2G22420 41.640 317 180 4 14 330 8 319 6.61e-83 255
MS.gene02086.t1 AT1G71695 45.928 307 156 5 29 333 44 342 6.67e-83 256
MS.gene02086.t1 AT5G58390 46.945 311 149 6 25 330 17 316 7.67e-83 254
MS.gene02086.t1 AT2G41480 40.653 337 181 7 4 330 1 328 2.60e-81 251
MS.gene02086.t1 AT3G21770 43.087 311 171 5 18 326 18 324 2.62e-81 251
MS.gene02086.t1 AT4G11290 42.633 319 179 3 14 330 10 326 4.58e-81 250
MS.gene02086.t1 AT1G05260 41.693 319 180 4 14 330 11 325 2.25e-79 246
MS.gene02086.t1 AT5G51890 39.939 328 190 5 4 330 1 322 3.46e-79 245
MS.gene02086.t1 AT4G37530 43.131 313 173 3 21 330 19 329 2.01e-78 243
MS.gene02086.t1 AT3G03670 40.694 317 185 2 14 330 8 321 7.17e-78 242
MS.gene02086.t1 AT5G17820 40.190 316 177 5 15 330 10 313 5.62e-77 239
MS.gene02086.t1 AT5G15180 38.415 328 197 4 4 330 6 329 6.00e-77 239
MS.gene02086.t1 AT5G64120 44.051 311 158 7 23 330 31 328 1.04e-76 239
MS.gene02086.t1 AT4G30170 42.857 308 167 4 26 330 24 325 1.67e-76 238
MS.gene02086.t1 AT3G01190 41.066 319 179 7 13 330 11 321 2.03e-76 238
MS.gene02086.t1 AT5G64110 46.205 303 148 8 33 330 38 330 5.66e-76 237
MS.gene02086.t1 AT5G17820 40.190 316 177 5 15 330 63 366 9.66e-76 238
MS.gene02086.t1 AT5G39580 45.215 303 149 8 33 330 29 319 3.20e-75 235
MS.gene02086.t1 AT2G18980 41.538 325 181 4 9 330 5 323 4.25e-75 235
MS.gene02086.t1 AT5G42180 39.748 317 182 6 14 329 8 316 4.54e-75 234
MS.gene02086.t1 AT1G05240 41.118 304 165 5 29 326 26 321 1.15e-74 234
MS.gene02086.t1 AT1G05250 41.118 304 165 5 29 326 26 321 1.15e-74 234
MS.gene02086.t1 AT4G25980 40.514 311 174 5 25 330 22 326 4.25e-74 232
MS.gene02086.t1 AT5G14130 41.693 319 175 5 16 330 19 330 8.68e-74 231
MS.gene02086.t1 AT5G14130 41.693 319 175 5 16 330 60 371 1.88e-73 232
MS.gene02086.t1 AT4G37520 41.042 307 176 3 27 330 25 329 1.37e-71 226
MS.gene02086.t1 AT4G37520 41.042 307 173 4 27 330 25 326 7.05e-71 224
MS.gene02086.t1 AT3G49960 39.806 309 181 3 25 330 23 329 4.92e-70 222
MS.gene02086.t1 AT5G67400 40.129 309 180 3 25 330 23 329 9.49e-70 221
MS.gene02086.t1 AT2G24800 40.909 308 171 5 27 330 29 329 1.13e-69 221
MS.gene02086.t1 AT4G31760 39.482 309 177 4 25 330 25 326 2.50e-69 220
MS.gene02086.t1 AT4G33420 39.103 312 177 5 19 330 27 325 9.33e-69 218
MS.gene02086.t1 AT4G33420 39.103 312 177 5 19 330 74 372 4.54e-68 218
MS.gene02086.t1 AT2G39040 40.895 313 172 8 26 330 43 350 2.94e-67 216
MS.gene02086.t1 AT1G77100 40.000 310 174 5 24 330 19 319 3.66e-67 214
MS.gene02086.t1 AT5G64100 40.532 301 166 7 33 330 41 331 5.41e-67 214
MS.gene02086.t1 AT3G28200 37.662 308 182 4 25 330 17 316 1.05e-65 210
MS.gene02086.t1 AT5G40150 37.662 308 183 4 25 330 28 328 2.40e-64 207
MS.gene02086.t1 AT2G35380 46.964 247 127 3 88 330 1 247 2.96e-64 204
MS.gene02086.t1 AT4G37530 42.529 261 147 2 21 278 19 279 6.35e-64 204
MS.gene02086.t1 AT4G26010 38.782 312 169 7 23 330 16 309 1.12e-63 205
MS.gene02086.t1 AT4G26010 38.782 312 169 7 23 330 44 337 1.76e-63 205
MS.gene02086.t1 AT4G33870 34.018 341 179 6 26 327 65 398 2.11e-63 207
MS.gene02086.t1 AT5G22410 37.097 310 181 8 28 332 27 327 8.25e-62 201
MS.gene02086.t1 AT4G17690 36.721 305 182 5 29 330 26 322 1.82e-61 200
MS.gene02086.t1 AT1G30870 36.513 304 180 6 33 333 55 348 3.63e-61 200
MS.gene02086.t1 AT5G24070 37.500 304 171 7 37 332 45 337 4.31e-61 199
MS.gene02086.t1 AT1G24110 35.494 324 202 5 10 330 3 322 9.42e-61 198
MS.gene02086.t1 AT2G34060 36.977 311 187 6 23 327 36 343 1.86e-60 198
MS.gene02086.t1 AT2G43480 37.377 305 171 8 34 330 43 335 5.77e-60 196
MS.gene02086.t1 AT5G47000 34.675 323 199 6 11 330 17 330 1.73e-58 192
MS.gene02086.t1 AT1G34510 37.267 322 186 7 10 330 3 309 2.68e-58 191
MS.gene02086.t1 AT3G17070 34.615 312 190 5 26 330 35 339 2.13e-52 177
MS.gene02086.t1 AT4G21960 33.993 303 189 4 33 332 35 329 1.60e-50 171
MS.gene02086.t1 AT2G37130 33.010 309 195 5 26 330 27 327 3.20e-44 155
MS.gene02086.t1 AT4G25980 44.186 172 92 3 25 196 67 234 2.97e-43 151
MS.gene02086.t1 AT2G37130 33.113 302 190 5 33 330 3 296 5.25e-43 151
MS.gene02086.t1 AT5G39580 43.077 195 93 5 33 217 29 215 1.45e-39 140
MS.gene02086.t1 AT3G17070 33.333 267 163 6 71 330 18 276 4.91e-38 137
MS.gene02086.t1 AT2G24800 40.476 168 96 1 27 194 29 192 1.41e-35 130
MS.gene02086.t1 AT3G42570 41.096 73 43 0 97 169 49 121 1.42e-11 62.4

Find 68 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTATGGAGTTGTTATT+TGG 0.195833 2.2:+58034974 None:intergenic
TATCACATCCAAACCTCTTA+TGG 0.249480 2.2:+58034961 None:intergenic
AAAGAAGAGAGTTTGATTAT+TGG 0.249991 2.2:+58033149 None:intergenic
GCTGTGAATGGAAATTCTTC+TGG 0.283914 2.2:-58033042 MS.gene02086:CDS
TGCTTGCAATGTTTGTAAAT+AGG 0.314540 2.2:+58033347 None:intergenic
AATGAGACTACCAAGCATTC+TGG 0.320060 2.2:+58035369 None:intergenic
GCTAGCCATTCCATCTTCTT+TGG 0.324779 2.2:+58033002 None:intergenic
TGTGTGGTGTTTGTGCTAAT+TGG 0.325673 2.2:-58035502 MS.gene02086:CDS
GCCCTTTCCAACTTGGAGAT+TGG 0.339568 2.2:+58033242 None:intergenic
AAACTATCCCTTCTTCCTAA+TGG 0.383956 2.2:+58033728 None:intergenic
CCTACTTGGCAAGTTCCATT+AGG 0.387141 2.2:-58033743 MS.gene02086:CDS
ATCTAGTTGTGCATTTGAAA+AGG 0.401167 2.2:+58035471 None:intergenic
CCAAATAACAACTCCATAAG+AGG 0.401483 2.2:-58034974 MS.gene02086:CDS
GAAACAAGCCCTTTCCAACT+TGG 0.404164 2.2:+58033235 None:intergenic
GAATGCTTGGTAGTCTCATT+AGG 0.416754 2.2:-58035366 MS.gene02086:CDS
TAACAACTCCATAAGAGGTT+TGG 0.417571 2.2:-58034969 MS.gene02086:CDS
ATTGACCTCTTCCAATTGTA+TGG 0.421998 2.2:+58033439 None:intergenic
TGGTACAAACCTAACCGATT+TGG 0.423311 2.2:-58033304 MS.gene02086:CDS
TTGGAGATTGGAGTAGTAGT+TGG 0.432843 2.2:+58033254 None:intergenic
TCAAATGTATCTGGTGTGGT+TGG 0.445470 2.2:+58033279 None:intergenic
ATGAGACTACCAAGCATTCT+GGG 0.445928 2.2:+58035370 None:intergenic
AATAGTGTCAGAACCATTTG+TGG 0.449041 2.2:+58033191 None:intergenic
GGTCGTGTTAAGAGTTGAAT+CGG 0.451680 2.2:+58033368 None:intergenic
GGCAAGTTCCATTAGGAAGA+AGG 0.454337 2.2:-58033736 MS.gene02086:CDS
TAGTTGGAGTCAAATGTATC+TGG 0.458242 2.2:+58033270 None:intergenic
TGGTTGGGTCCAAATCGGTT+AGG 0.471942 2.2:+58033295 None:intergenic
TGCAGGCAAATGGTCCTACT+TGG 0.473885 2.2:-58033757 MS.gene02086:intron
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.2:+58034905 None:intergenic
GAATGGAAATTCTTCTGGAT+TGG 0.479261 2.2:-58033037 MS.gene02086:CDS
TAGTCGAGTAAGGTTGAAAG+TGG 0.481738 2.2:+58033664 None:intergenic
GTCGTGTTAAGAGTTGAATC+GGG 0.481859 2.2:+58033369 None:intergenic
TCTAGTTGTGCATTTGAAAA+GGG 0.482989 2.2:+58035472 None:intergenic
TGCTGAAATATCATCTGATC+TGG 0.487672 2.2:-58034867 MS.gene02086:intron
CAAATGTATCTGGTGTGGTT+GGG 0.492575 2.2:+58033280 None:intergenic
CATGTACTGTTGTAAAATGA+AGG 0.493251 2.2:+58035448 None:intergenic
CTTATGGAGTTGTTATTTGG+TGG 0.493339 2.2:+58034977 None:intergenic
CAATCTGATCCCAGAATGCT+TGG 0.494211 2.2:-58035379 MS.gene02086:CDS
TCCAATCTCCAAGTTGGAAA+GGG 0.496337 2.2:-58033243 MS.gene02086:CDS
TTTGTACCAGGTCCACCATT+GGG 0.500186 2.2:+58033318 None:intergenic
CTCCAATCTCCAAGTTGGAA+AGG 0.508356 2.2:-58033244 MS.gene02086:CDS
CCTAATGGAACTTGCCAAGT+AGG 0.522118 2.2:+58033743 None:intergenic
ACTGTAGTCACCAAAGAAGA+TGG 0.522359 2.2:-58033012 MS.gene02086:CDS
TGGTGTGGTTGGGTCCAAAT+CGG 0.525424 2.2:+58033290 None:intergenic
TACTACTCCAATCTCCAAGT+TGG 0.528086 2.2:-58033249 MS.gene02086:CDS
TTATACAATTTCAGCAACAC+TGG 0.533969 2.2:-58033396 MS.gene02086:CDS
GCAAGTTCCATTAGGAAGAA+GGG 0.535318 2.2:-58033735 MS.gene02086:CDS
ACTGATCTAGTTGCACTCTC+AGG 0.536287 2.2:-58033608 MS.gene02086:intron
GTTTGTACCAGGTCCACCAT+TGG 0.536968 2.2:+58033317 None:intergenic
ATATGTCCCAATGGTGGACC+TGG 0.538663 2.2:-58033324 MS.gene02086:CDS
GTGGTGTTTGTGCTAATTGG+AGG 0.541230 2.2:-58035499 MS.gene02086:CDS
ACACAGTGTAATGCTGTGAA+TGG 0.545426 2.2:-58033054 MS.gene02086:CDS
GGTGGCCATACAATTGGAAG+AGG 0.561371 2.2:-58033444 MS.gene02086:CDS
AGTCGAGTAAGGTTGAAAGT+GGG 0.569417 2.2:+58033665 None:intergenic
CGTATCGTTCAGCAAAATTG+AGG 0.575174 2.2:+58035027 None:intergenic
ATCTTCTTTGGTGACTACAG+TGG 0.578680 2.2:+58033014 None:intergenic
GCTGTTGCACTTAGACCAAG+TGG 0.592170 2.2:+58035532 None:intergenic
AAATCGGTTAGGTTTGTACC+AGG 0.592503 2.2:+58033306 None:intergenic
GTCGAGTAAGGTTGAAAGTG+GGG 0.594816 2.2:+58033666 None:intergenic
AGTCACCAAAGAAGATGGAA+TGG 0.596361 2.2:-58033007 MS.gene02086:CDS
CAAGCAATATGTCCCAATGG+TGG 0.620363 2.2:-58033330 MS.gene02086:CDS
TTGCAAGCAATATGTCCCAA+TGG 0.633670 2.2:-58033333 MS.gene02086:CDS
AAACCAGATCAAAACAGCGG+TGG 0.640248 2.2:-58034939 MS.gene02086:CDS
TCGAGTAAGGTTGAAAGTGG+GGG 0.643752 2.2:+58033667 None:intergenic
TCGTGTTAAGAGTTGAATCG+GGG 0.656526 2.2:+58033370 None:intergenic
AATCTTGATTCAATCGTACG+TGG 0.676766 2.2:-58035421 MS.gene02086:CDS
GGAGTCAAATGTATCTGGTG+TGG 0.686590 2.2:+58033275 None:intergenic
CAACTAGATCAGTAGTACTG+AGG 0.692185 2.2:+58033618 None:intergenic
GATAAACCAGATCAAAACAG+CGG 0.762418 2.2:-58034942 MS.gene02086:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAGAAAAAAAAATTAAAT+GGG + chr2.2:58035028-58035047 None:intergenic 10.0%
!! TAGAAGAAAAAAAAATTAAA+TGG + chr2.2:58035029-58035048 None:intergenic 10.0%
!!! ATGATGTTTTTTTTTTTTTT+TGG - chr2.2:58034385-58034404 MS.gene02086:intron 10.0%
!!! ATGTATTAAATTTATTTTCA+CGG + chr2.2:58034451-58034470 None:intergenic 10.0%
!! AAGAAAAAAAAATTAAATGG+GGG + chr2.2:58035026-58035045 None:intergenic 15.0%
!! AAGGATAAACAAATAAATAT+AGG - chr2.2:58033899-58033918 MS.gene02086:intron 15.0%
!! ATAAAAATGTTGAAATTGTT+AGG - chr2.2:58034501-58034520 MS.gene02086:intron 15.0%
!! GAAGAAAAAAAAATTAAATG+GGG + chr2.2:58035027-58035046 None:intergenic 15.0%
!! GATAAACAAAATATATATGA+TGG + chr2.2:58034736-58034755 None:intergenic 15.0%
!! TATATTTATTTGTTTATCCT+TGG + chr2.2:58033900-58033919 None:intergenic 15.0%
!!! TCAAATTTAAATTTTAAGGA+CGG - chr2.2:58033282-58033301 MS.gene02086:CDS 15.0%
!!! TTTAAACTAGTCAAAATTTT+AGG + chr2.2:58034641-58034660 None:intergenic 15.0%
!! AAGAAAAGAAATGTAGATAT+TGG - chr2.2:58033783-58033802 MS.gene02086:intron 20.0%
!! ATGATAAAAATGGGTAATAT+TGG - chr2.2:58035423-58035442 MS.gene02086:CDS 20.0%
!! GAAAAAGAAAAATAAACAGT+AGG + chr2.2:58033264-58033283 None:intergenic 20.0%
!!! ACTTTTTCCATTCATTTTTT+AGG - chr2.2:58035066-58035085 MS.gene02086:intron 20.0%
!!! TTTTTAACAATCTCAAAAGT+GGG + chr2.2:58034229-58034248 None:intergenic 20.0%
!!! TTTTTTAACAATCTCAAAAG+TGG + chr2.2:58034230-58034249 None:intergenic 20.0%
! AAACATTCATGAAAATGTGA+AGG + chr2.2:58033241-58033260 None:intergenic 25.0%
! AAAGAAGAGAGTTTGATTAT+TGG + chr2.2:58035385-58035404 None:intergenic 25.0%
! ACGATAGTTAATTATCGATA+GGG - chr2.2:58034259-58034278 MS.gene02086:intron 25.0%
! CATCATAAAACAACATGAAA+AGG + chr2.2:58034371-58034390 None:intergenic 25.0%
! GCATTTCTCAATTATATAAC+TGG - chr2.2:58034034-58034053 MS.gene02086:intron 25.0%
! GTTCAAACAAATCATTATCA+AGG - chr2.2:58034663-58034682 MS.gene02086:intron 25.0%
! GTTCATTTAAATGTATGACT+AGG + chr2.2:58033707-58033726 None:intergenic 25.0%
! TATCGATAATTAACTATCGT+GGG + chr2.2:58034259-58034278 None:intergenic 25.0%
! TTAGGTTAAACGTTATGATT+GGG - chr2.2:58034519-58034538 MS.gene02086:intron 25.0%
! TTCTCAATTATATAACTGGT+GGG - chr2.2:58034038-58034057 MS.gene02086:intron 25.0%
! TTTCTCAATTATATAACTGG+TGG - chr2.2:58034037-58034056 MS.gene02086:intron 25.0%
!! ACATTTTTATCAGTTGAACA+CGG + chr2.2:58034491-58034510 None:intergenic 25.0%
!! TTCTATGAACAAGTAAGTTT+TGG + chr2.2:58033758-58033777 None:intergenic 25.0%
!!! AGGGTAAAGATGTAATTTTT+TGG - chr2.2:58034278-58034297 MS.gene02086:intron 25.0%
!!! ATTACCCATTTTTATCATTG+AGG + chr2.2:58035421-58035440 None:intergenic 25.0%
!!! TGGTTATGTATATTTTGGTT+TGG - chr2.2:58034148-58034167 MS.gene02086:intron 25.0%
!!! TTTTCCATTCATTTTTTAGG+TGG - chr2.2:58035069-58035088 MS.gene02086:intron 25.0%
AAATGTATGACTAGGAAACA+AGG + chr2.2:58033699-58033718 None:intergenic 30.0%
ATAAACTCACAGATACAAAG+TGG + chr2.2:58034563-58034582 None:intergenic 30.0%
ATCATAAGTTGTCCAAAACA+TGG + chr2.2:58033873-58033892 None:intergenic 30.0%
ATCTAGTTGTGCATTTGAAA+AGG + chr2.2:58033063-58033082 None:intergenic 30.0%
ATTTGACGAAATCACATACA+TGG + chr2.2:58033400-58033419 None:intergenic 30.0%
CACGATAGTTAATTATCGAT+AGG - chr2.2:58034258-58034277 MS.gene02086:intron 30.0%
CATGTACTGTTGTAAAATGA+AGG + chr2.2:58033086-58033105 None:intergenic 30.0%
CTATCGATAATTAACTATCG+TGG + chr2.2:58034260-58034279 None:intergenic 30.0%
GTAGCCTCAATGATAAAAAT+GGG - chr2.2:58035414-58035433 MS.gene02086:CDS 30.0%
GTTAGGTTAAACGTTATGAT+TGG - chr2.2:58034518-58034537 MS.gene02086:intron 30.0%
TACAATGCAACAAAAATTGC+AGG - chr2.2:58034757-58034776 MS.gene02086:intron 30.0%
TAGGTTAAACGTTATGATTG+GGG - chr2.2:58034520-58034539 MS.gene02086:intron 30.0%
TATGAAAGAGAGAGTTGTTA+CGG - chr2.2:58033846-58033865 MS.gene02086:intron 30.0%
TCATAAGTTGTCCAAAACAT+GGG + chr2.2:58033872-58033891 None:intergenic 30.0%
TCTAGTTGTGCATTTGAAAA+GGG + chr2.2:58033062-58033081 None:intergenic 30.0%
TGCTTGCAATGTTTGTAAAT+AGG + chr2.2:58035187-58035206 None:intergenic 30.0%
TGTAGCCTCAATGATAAAAA+TGG - chr2.2:58035413-58035432 MS.gene02086:CDS 30.0%
TTATACAATTTCAGCAACAC+TGG - chr2.2:58035135-58035154 MS.gene02086:intron 30.0%
TTTATAGCGAATGATGAAGT+GGG - chr2.2:58034304-58034323 MS.gene02086:intron 30.0%
! AAATCACATACATGGTAATG+AGG + chr2.2:58033392-58033411 None:intergenic 30.0%
! GTGTCTGGTTATGTATATTT+TGG - chr2.2:58034143-58034162 MS.gene02086:intron 30.0%
! TGCAATTTTTGTTGCATTGT+AGG + chr2.2:58034758-58034777 None:intergenic 30.0%
! TTTTATAGCGAATGATGAAG+TGG - chr2.2:58034303-58034322 MS.gene02086:intron 30.0%
!! AGTTAGATTTTAGTCGAGTA+AGG + chr2.2:58034880-58034899 None:intergenic 30.0%
!! GGTAATATTGGAGTTTTAAC+TGG - chr2.2:58035435-58035454 MS.gene02086:CDS 30.0%
AAACTATCCCTTCTTCCTAA+TGG + chr2.2:58034806-58034825 None:intergenic 35.0%
AATAGTGTCAGAACCATTTG+TGG + chr2.2:58035343-58035362 None:intergenic 35.0%
AATCTTGATTCAATCGTACG+TGG - chr2.2:58033110-58033129 MS.gene02086:CDS 35.0%
ATGGCCACCTAAAAAATGAA+TGG + chr2.2:58035076-58035095 None:intergenic 35.0%
ATTGACCTCTTCCAATTGTA+TGG + chr2.2:58035095-58035114 None:intergenic 35.0%
CAACAAAAATTGCAGGCAAA+TGG - chr2.2:58034764-58034783 MS.gene02086:intron 35.0%
CATTTGTGGAAAAAAGCTCT+TGG + chr2.2:58035329-58035348 None:intergenic 35.0%
CCAAATAACAACTCCATAAG+AGG - chr2.2:58033557-58033576 MS.gene02086:intron 35.0%
GAATGGAAATTCTTCTGGAT+TGG - chr2.2:58035494-58035513 MS.gene02086:CDS 35.0%
GACAACTTATGATACAACCA+AGG - chr2.2:58033880-58033899 MS.gene02086:intron 35.0%
GATAAACCAGATCAAAACAG+CGG - chr2.2:58033589-58033608 MS.gene02086:intron 35.0%
TAACAACTCCATAAGAGGTT+TGG - chr2.2:58033562-58033581 MS.gene02086:intron 35.0%
TACAAATGTATGCCCCAATT+CGG - chr2.2:58034002-58034021 MS.gene02086:intron 35.0%
TAGTTGGAGTCAAATGTATC+TGG + chr2.2:58035264-58035283 None:intergenic 35.0%
TATCACATCCAAACCTCTTA+TGG + chr2.2:58033573-58033592 None:intergenic 35.0%
TGCTGAAATATCATCTGATC+TGG - chr2.2:58033664-58033683 MS.gene02086:CDS 35.0%
! CAGTAGCGTAGACTTTTATA+TGG - chr2.2:58034121-58034140 MS.gene02086:intron 35.0%
! CCTCTTATGGAGTTGTTATT+TGG + chr2.2:58033560-58033579 None:intergenic 35.0%
! CTCAATTTTGCTGAACGATA+CGG - chr2.2:58033505-58033524 MS.gene02086:intron 35.0%
! GTAGACTTTTATATGGTGTC+TGG - chr2.2:58034128-58034147 MS.gene02086:intron 35.0%
! TCTTTGTATTTAAAGCCTCG+AGG + chr2.2:58033359-58033378 None:intergenic 35.0%
!! CTTATGGAGTTGTTATTTGG+TGG + chr2.2:58033557-58033576 None:intergenic 35.0%
!!! CAAGAGCTTTTTTCCACAAA+TGG - chr2.2:58035327-58035346 MS.gene02086:intron 35.0%
!!! TTTTTAGGTGGCCATACAAT+TGG - chr2.2:58035081-58035100 MS.gene02086:intron 35.0%
AAATCGGTTAGGTTTGTACC+AGG + chr2.2:58035228-58035247 None:intergenic 40.0%
AACTCACAGATACAAAGTGG+AGG + chr2.2:58034560-58034579 None:intergenic 40.0%
AATGAGACTACCAAGCATTC+TGG + chr2.2:58033165-58033184 None:intergenic 40.0%
ACAAATGTATGCCCCAATTC+GGG - chr2.2:58034003-58034022 MS.gene02086:intron 40.0%
ACACAGTGTAATGCTGTGAA+TGG - chr2.2:58035477-58035496 MS.gene02086:CDS 40.0%
ACTGTAGTCACCAAAGAAGA+TGG - chr2.2:58035519-58035538 MS.gene02086:CDS 40.0%
AGTCACCAAAGAAGATGGAA+TGG - chr2.2:58035524-58035543 MS.gene02086:CDS 40.0%
AGTCGAGTAAGGTTGAAAGT+GGG + chr2.2:58034869-58034888 None:intergenic 40.0%
ATAAAAGTCTACGCTACTGC+TGG + chr2.2:58034120-58034139 None:intergenic 40.0%
ATAGTTGTGAACTTTGTCGC+AGG - chr2.2:58033472-58033491 MS.gene02086:intron 40.0%
ATGAGACTACCAAGCATTCT+GGG + chr2.2:58033164-58033183 None:intergenic 40.0%
CAAATGTATCTGGTGTGGTT+GGG + chr2.2:58035254-58035273 None:intergenic 40.0%
CAACTAGATCAGTAGTACTG+AGG + chr2.2:58034916-58034935 None:intergenic 40.0%
CGTATCGTTCAGCAAAATTG+AGG + chr2.2:58033507-58033526 None:intergenic 40.0%
GCAAGTTCCATTAGGAAGAA+GGG - chr2.2:58034796-58034815 MS.gene02086:intron 40.0%
GCTGTGAATGGAAATTCTTC+TGG - chr2.2:58035489-58035508 MS.gene02086:CDS 40.0%
GGTCGTGTTAAGAGTTGAAT+CGG + chr2.2:58035166-58035185 None:intergenic 40.0%
GTCGTGTTAAGAGTTGAATC+GGG + chr2.2:58035165-58035184 None:intergenic 40.0%
TACTACTCCAATCTCCAAGT+TGG - chr2.2:58035282-58035301 MS.gene02086:intron 40.0%
TAGTCGAGTAAGGTTGAAAG+TGG + chr2.2:58034870-58034889 None:intergenic 40.0%
TAGTTGTGAACTTTGTCGCA+GGG - chr2.2:58033473-58033492 MS.gene02086:intron 40.0%
TCAAATGTATCTGGTGTGGT+TGG + chr2.2:58035255-58035274 None:intergenic 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.2:58033629-58033648 None:intergenic 40.0%
TCGTGTTAAGAGTTGAATCG+GGG + chr2.2:58035164-58035183 None:intergenic 40.0%
TGGTACAAACCTAACCGATT+TGG - chr2.2:58035227-58035246 MS.gene02086:intron 40.0%
TGTGTGGTGTTTGTGCTAAT+TGG - chr2.2:58033029-58033048 MS.gene02086:CDS 40.0%
TTGCAAGCAATATGTCCCAA+TGG - chr2.2:58035198-58035217 MS.gene02086:intron 40.0%
TTGGAGATTGGAGTAGTAGT+TGG + chr2.2:58035280-58035299 None:intergenic 40.0%
! AGGAAGATTTTGAGCTGCAA+GGG + chr2.2:58034843-58034862 None:intergenic 40.0%
! ATCTTCTTTGGTGACTACAG+TGG + chr2.2:58035520-58035539 None:intergenic 40.0%
! CAGATACAAAGTGGAGGTAT+CGG + chr2.2:58034554-58034573 None:intergenic 40.0%
! GAATGCTTGGTAGTCTCATT+AGG - chr2.2:58033165-58033184 MS.gene02086:CDS 40.0%
! TCCAATCTCCAAGTTGGAAA+GGG - chr2.2:58035288-58035307 MS.gene02086:intron 40.0%
!! AGATACAAAGTGGAGGTATC+GGG + chr2.2:58034553-58034572 None:intergenic 40.0%
!!! GGAGTTTTAACTGGATCTCA+AGG - chr2.2:58035444-58035463 MS.gene02086:CDS 40.0%
AAACCAGATCAAAACAGCGG+TGG - chr2.2:58033592-58033611 MS.gene02086:intron 45.0%
AAGCTTGTATGCCCCAATTC+GGG - chr2.2:58034068-58034087 MS.gene02086:intron 45.0%
AATGCCTTCCTTACCCGAAT+TGG + chr2.2:58034019-58034038 None:intergenic 45.0%
ACTGATCTAGTTGCACTCTC+AGG - chr2.2:58034923-58034942 MS.gene02086:CDS 45.0%
AGGAAGGCTATCAAATGGTG+TGG - chr2.2:58034093-58034112 MS.gene02086:intron 45.0%
ATGCCTTCCTTACCCGAATT+GGG + chr2.2:58034018-58034037 None:intergenic 45.0%
CAAGCAATATGTCCCAATGG+TGG - chr2.2:58035201-58035220 MS.gene02086:intron 45.0%
CAAGCTTGTATGCCCCAATT+CGG - chr2.2:58034067-58034086 MS.gene02086:intron 45.0%
CAATCTGATCCCAGAATGCT+TGG - chr2.2:58033152-58033171 MS.gene02086:CDS 45.0%
CCTAATGGAACTTGCCAAGT+AGG + chr2.2:58034791-58034810 None:intergenic 45.0%
CCTACTTGGCAAGTTCCATT+AGG - chr2.2:58034788-58034807 MS.gene02086:intron 45.0%
GAAACAAGCCCTTTCCAACT+TGG + chr2.2:58035299-58035318 None:intergenic 45.0%
GCTAGCCATTCCATCTTCTT+TGG + chr2.2:58035532-58035551 None:intergenic 45.0%
GGAGTCAAATGTATCTGGTG+TGG + chr2.2:58035259-58035278 None:intergenic 45.0%
GGCAAGTTCCATTAGGAAGA+AGG - chr2.2:58034795-58034814 MS.gene02086:intron 45.0%
GTCGAGTAAGGTTGAAAGTG+GGG + chr2.2:58034868-58034887 None:intergenic 45.0%
GTGGTGTTTGTGCTAATTGG+AGG - chr2.2:58033032-58033051 MS.gene02086:CDS 45.0%
TCGAGTAAGGTTGAAAGTGG+GGG + chr2.2:58034867-58034886 None:intergenic 45.0%
TTTAAGCGAGTTAGACCTCG+AGG - chr2.2:58033341-58033360 MS.gene02086:CDS 45.0%
TTTGTACCAGGTCCACCATT+GGG + chr2.2:58035216-58035235 None:intergenic 45.0%
! AGTTGTTACGGCCCATGTTT+TGG - chr2.2:58033858-58033877 MS.gene02086:intron 45.0%
! CAGGAAGATTTTGAGCTGCA+AGG + chr2.2:58034844-58034863 None:intergenic 45.0%
! CTCCAATCTCCAAGTTGGAA+AGG - chr2.2:58035287-58035306 MS.gene02086:intron 45.0%
!! TGCAACAGCTTTTTGCTGTG+TGG - chr2.2:58033013-58033032 MS.gene02086:CDS 45.0%
!!! TTTCCACCGCTGTTTTGATC+TGG + chr2.2:58033598-58033617 None:intergenic 45.0%
!!! TTTTTCAAATTTAAATTTTA+AGG - chr2.2:58033278-58033297 MS.gene02086:CDS 5.0%
ATAGCCTTCCTTGCCCGAAT+TGG + chr2.2:58034084-58034103 None:intergenic 50.0%
GCCCTTTCCAACTTGGAGAT+TGG + chr2.2:58035292-58035311 None:intergenic 50.0%
GCTGTTGCACTTAGACCAAG+TGG + chr2.2:58033002-58033021 None:intergenic 50.0%
GGGCAAGGAAGGCTATCAAA+TGG - chr2.2:58034088-58034107 MS.gene02086:intron 50.0%
GGTGGCCATACAATTGGAAG+AGG - chr2.2:58035087-58035106 MS.gene02086:intron 50.0%
GTTTGTACCAGGTCCACCAT+TGG + chr2.2:58035217-58035236 None:intergenic 50.0%
TAGCCTTCCTTGCCCGAATT+GGG + chr2.2:58034083-58034102 None:intergenic 50.0%
TGCAGGCAAATGGTCCTACT+TGG - chr2.2:58034774-58034793 MS.gene02086:intron 50.0%
TGCCTTCCTTACCCGAATTG+GGG + chr2.2:58034017-58034036 None:intergenic 50.0%
TGGTGTGGTTGGGTCCAAAT+CGG + chr2.2:58035244-58035263 None:intergenic 50.0%
TGGTTGGGTCCAAATCGGTT+AGG + chr2.2:58035239-58035258 None:intergenic 50.0%
TGTATGCCCCAATTCGGGTA+AGG - chr2.2:58034008-58034027 MS.gene02086:intron 50.0%
!! ATATGTCCCAATGGTGGACC+TGG - chr2.2:58035207-58035226 MS.gene02086:intron 50.0%
AGCCTTCCTTGCCCGAATTG+GGG + chr2.2:58034082-58034101 None:intergenic 55.0%
GTAAGGTTGAAAGTGGGGGC+AGG + chr2.2:58034863-58034882 None:intergenic 55.0%
TGCCCCAATTCGGGTAAGGA+AGG - chr2.2:58034012-58034031 MS.gene02086:intron 55.0%
TGTATGCCCCAATTCGGGCA+AGG - chr2.2:58034073-58034092 MS.gene02086:intron 55.0%
TGCCCCAATTCGGGCAAGGA+AGG - chr2.2:58034077-58034096 MS.gene02086:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58032993 58035560 58032993 ID=MS.gene02086
chr2.2 mRNA 58032993 58035560 58032993 ID=MS.gene02086.t1;Parent=MS.gene02086
chr2.2 exon 58035339 58035560 58035339 ID=MS.gene02086.t1.exon1;Parent=MS.gene02086.t1
chr2.2 CDS 58035339 58035560 58035339 ID=cds.MS.gene02086.t1;Parent=MS.gene02086.t1
chr2.2 exon 58034868 58035059 58034868 ID=MS.gene02086.t1.exon2;Parent=MS.gene02086.t1
chr2.2 CDS 58034868 58035059 58034868 ID=cds.MS.gene02086.t1;Parent=MS.gene02086.t1
chr2.2 exon 58033609 58033774 58033609 ID=MS.gene02086.t1.exon3;Parent=MS.gene02086.t1
chr2.2 CDS 58033609 58033774 58033609 ID=cds.MS.gene02086.t1;Parent=MS.gene02086.t1
chr2.2 exon 58032993 58033465 58032993 ID=MS.gene02086.t1.exon4;Parent=MS.gene02086.t1
chr2.2 CDS 58032993 58033465 58032993 ID=cds.MS.gene02086.t1;Parent=MS.gene02086.t1
Gene Sequence

>MS.gene02086

ATGAATCCACTTGGTCTAAGTGCAACAGCTTTTTGCTGTGTGGTGTTTGTGCTAATTGGAGGAGTACCCTTTTCAAATGCACAACTAGATCCTTCATTTTACAACAGTACATGTTCTAATCTTGATTCAATCGTACGTGGTGTGCTCACAAATGTTTCACAATCTGATCCCAGAATGCTTGGTAGTCTCATTAGGCTACATTTTCATGACTGTTTTGTTCAAGTATGTGTATTCTTCATCTCTTACCTTCACATTTTCATGAATGTTTCCTACTGTTTATTTTTCTTTTTCAAATTTAAATTTTAAGGACGGTGAATTTTGTGAAATTATAAGTGTCTAGTAGTAATATTTAAGCGAGTTAGACCTCGAGGCTTTAAATACAAAGATTCAATAAAACCTCATTACCATGTATGTGATTTCGTCAAATTTGTTGTTATTTCAAACATGCGCGCATAATGAGTTCAAATGTATATATGCTAATAGTTGTGAACTTTGTCGCAGGGTTGCGATGCCTCAATTTTGCTGAACGATACGGCTACAATAGTGAGCGAGCAAAGTGCACCACCAAATAACAACTCCATAAGAGGTTTGGATGTGATAAACCAGATCAAAACAGCGGTGGAAAATGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCTCTTTCTGCTGAAATATCATCTGATCTGGTATATATATCCTTGTTTCCTAGTCATACATTTAAATGAACTTCTAGCTAGATAGTATATTGTTTAATTCCAAAACTTACTTGTTCATAGAAAATAAAAGAAAAGAAATGTAGATATTGGTACGAGAATTAAATCAAAGAAAGTAAGAACAAAATGAGAGTATGAAAGAGAGAGTTGTTACGGCCCATGTTTTGGACAACTTATGATACAACCAAGGATAAACAAATAAATATAGGTAATGACACAAAAATCAAAACAATAGAGAGAGCAAGAACACAATAAAAAATATGAAAGAGAAAGTTGTCTAAAACACTGTTACAAATGTATGCCCCAATTCGGGTAAGGAAGGCATTTCTCAATTATATAACTGGTGGGATTTCACAAGCTTGTATGCCCCAATTCGGGCAAGGAAGGCTATCAAATGGTGTGGTCCAGCAGTAGCGTAGACTTTTATATGGTGTCTGGTTATGTATATTTTGGTTTGGACTGATATGATCGTTTTAATTTTACATGATCATATCTTGAACATTGATTGATGTTCCCACTTTTGAGATTGTTAAAAAAACTGATCCCACGATAGTTAATTATCGATAGGGTAAAGATGTAATTTTTTGGTGTTTTATAGCGAATGATGAAGTGGGAACAGCAAAATTCTCATATCTTAATCTTATGCTTGTACTTTCCTTTTCATGTTGTTTTATGATGTTTTTTTTTTTTTTTGGTACAAATGATGTTTTAATACATTGTTAAAAGAAATACTAACCGTGAAAATAAATTTAATACATTGTTAAAGAAATACTAACCGTGTTCAACTGATAAAAATGTTGAAATTGTTAGGTTAAACGTTATGATTGGGGTTCGAATCCCGATACCTCCACTTTGTATCTGTGAGTTTATGATAGCTTTGTCATCTCGTCTGTCACAAAAAAAATAAAAATGAATTAGTTATTTGCCTAAAATTTTGACTAGTTTAAATAGTTCAAACAAATCATTATCAAGGATATGTGACAATGTACGTTTTTTAATTTTATTAATTAACATCATAAACCATCATATATATTTTGTTTATCCTACAATGCAACAAAAATTGCAGGCAAATGGTCCTACTTGGCAAGTTCCATTAGGAAGAAGGGATAGTTTGACAGCAAATAATTCCCTTGCAGCTCAAAATCTTCCTGCCCCCACTTTCAACCTTACTCGACTAAAATCTAACTTTGATAATCAAAACCTCAGTACTACTGATCTAGTTGCACTCTCAGGTATAAATTTTTTGTTTCTTTAAAATATGTAACATGAATGTATGTACATATAGTGTAAACATTACTCATATTAAGTATCCCCCATTTAATTTTTTTTTCTTCTAATAATATCGTTGTATTAACTTTTTCCATTCATTTTTTAGGTGGCCATACAATTGGAAGAGGTCAATGCAGATTTTTCGTTGATCGATTATACAATTTCAGCAACACTGGAAACCCCGATTCAACTCTTAACACGACCTATTTACAAACATTGCAAGCAATATGTCCCAATGGTGGACCTGGTACAAACCTAACCGATTTGGACCCAACCACACCAGATACATTTGACTCCAACTACTACTCCAATCTCCAAGTTGGAAAGGGCTTGTTTCAGAGTGACCAAGAGCTTTTTTCCACAAATGGTTCTGACACTATTTCTATTGTCAATAGTTTCGCCAATAATCAAACTCTCTTCTTTGAAAATTTTGTAGCCTCAATGATAAAAATGGGTAATATTGGAGTTTTAACTGGATCTCAAGGTGAAATTAGAACACAGTGTAATGCTGTGAATGGAAATTCTTCTGGATTGGCCACTGTAGTCACCAAAGAAGATGGAATGGCTAGCTCATTCTAA
Protein sequence

>MS.gene02086.t1

MNPLGLSATAFCCVVFVLIGGVPFSNAQLDPSFYNSTCSNLDSIVRGVLTNVSQSDPRMLGSLIRLHFHDCFVQGCDASILLNDTATIVSEQSAPPNNNSIRGLDVINQIKTAVENACPNTVSCADILALSAEISSDLANGPTWQVPLGRRDSLTANNSLAAQNLPAPTFNLTRLKSNFDNQNLSTTDLVALSGGHTIGRGQCRFFVDRLYNFSNTGNPDSTLNTTYLQTLQAICPNGGPGTNLTDLDPTTPDTFDSNYYSNLQVGKGLFQSDQELFSTNGSDTISIVNSFANNQTLFFENFVASMIKMGNIGVLTGSQGEIRTQCNAVNGNSSGLATVVTKEDGMASSF