AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03132

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03132.t1 MTR_2g029820 96.620 355 12 0 1 355 1 355 0.0 710
MS.gene03132.t1 MTR_2g029815 88.169 355 39 1 1 355 1 352 0.0 645
MS.gene03132.t1 MTR_2g029800 83.380 355 57 1 1 355 1 353 0.0 612
MS.gene03132.t1 MTR_2g029830 82.282 333 58 1 22 353 21 353 0.0 568
MS.gene03132.t1 MTR_2g028980 70.986 355 103 0 1 355 1 355 0.0 529
MS.gene03132.t1 MTR_2g029850 73.239 355 90 3 1 354 1 351 0.0 527
MS.gene03132.t1 MTR_2g029740 71.549 355 101 0 1 355 1 355 0.0 524
MS.gene03132.t1 MTR_2g029750 69.859 355 106 1 1 355 1 354 0.0 511
MS.gene03132.t1 MTR_2g029860 71.989 357 94 5 1 355 1 353 0.0 511
MS.gene03132.t1 MTR_2g029910 67.797 354 109 2 3 355 4 353 5.65e-177 495
MS.gene03132.t1 MTR_2g029830 83.630 281 45 1 74 353 5 285 1.16e-174 486
MS.gene03132.t1 MTR_2g029560 63.099 355 120 2 1 355 1 344 2.22e-163 460
MS.gene03132.t1 MTR_2g029730 63.764 356 117 3 1 355 1 345 1.53e-162 458
MS.gene03132.t1 MTR_1g054205 59.164 311 126 1 21 330 16 326 4.05e-133 383
MS.gene03132.t1 MTR_7g093370 60.261 307 121 1 25 330 65 371 4.82e-133 384
MS.gene03132.t1 MTR_5g021060 53.135 303 141 1 29 331 30 331 2.31e-110 325
MS.gene03132.t1 MTR_8g076820 50.825 303 148 1 29 331 30 331 2.03e-108 320
MS.gene03132.t1 MTR_4g125940 50.938 320 153 2 14 331 13 330 1.10e-106 316
MS.gene03132.t1 MTR_2g040000 49.837 307 149 2 28 331 28 332 3.03e-104 310
MS.gene03132.t1 MTR_5g017860 50.820 305 146 3 27 330 25 326 2.84e-103 307
MS.gene03132.t1 MTR_5g017850 49.346 306 149 4 27 330 25 326 1.56e-100 300
MS.gene03132.t1 MTR_1g022970 49.338 302 153 0 29 330 46 347 1.44e-99 298
MS.gene03132.t1 MTR_4g125940 53.986 276 123 2 58 331 2 275 2.47e-96 287
MS.gene03132.t1 MTR_2g084080 45.538 325 168 2 6 330 2 317 3.00e-96 289
MS.gene03132.t1 MTR_3g094650 47.222 324 156 4 5 326 8 318 8.78e-96 288
MS.gene03132.t1 MTR_4g029200 48.065 310 152 2 21 330 38 338 7.98e-95 286
MS.gene03132.t1 MTR_3g094670 47.256 328 158 4 1 326 4 318 3.27e-94 284
MS.gene03132.t1 MTR_2g084000 48.852 305 148 2 26 330 23 319 3.98e-94 283
MS.gene03132.t1 MTR_4g046713 45.201 323 169 4 9 330 11 326 5.09e-94 283
MS.gene03132.t1 MTR_7g072510 45.062 324 161 3 7 330 6 312 6.50e-94 283
MS.gene03132.t1 MTR_3g466200 46.769 325 157 5 9 330 9 320 1.78e-93 282
MS.gene03132.t1 MTR_2g088770 46.082 319 166 5 15 331 12 326 1.85e-93 282
MS.gene03132.t1 MTR_4g029170 47.950 317 154 4 16 330 14 321 2.28e-93 281
MS.gene03132.t1 MTR_5g074970 47.112 329 159 5 7 330 8 326 7.05e-93 280
MS.gene03132.t1 MTR_3g072190 47.855 303 149 2 28 330 25 318 1.25e-92 280
MS.gene03132.t1 MTR_2g084090 47.152 316 155 5 17 330 13 318 2.81e-92 279
MS.gene03132.t1 MTR_2g084020 45.860 314 162 2 17 330 13 318 2.84e-92 279
MS.gene03132.t1 MTR_5g083860 45.062 324 166 4 9 330 12 325 3.26e-92 279
MS.gene03132.t1 MTR_4g083710 47.335 319 158 3 15 330 13 324 5.37e-92 278
MS.gene03132.t1 MTR_3g094630 46.988 332 161 4 1 330 4 322 2.02e-91 276
MS.gene03132.t1 MTR_2g084110 45.223 314 163 2 17 330 13 317 3.85e-91 276
MS.gene03132.t1 MTR_2g084010 45.860 314 162 2 17 330 13 318 6.34e-91 275
MS.gene03132.t1 MTR_4g029190 49.026 308 145 5 26 330 42 340 4.48e-90 274
MS.gene03132.t1 MTR_4g029180 47.841 301 146 4 32 330 30 321 4.66e-90 273
MS.gene03132.t1 MTR_4g122640 45.545 303 160 3 29 330 38 336 1.16e-88 270
MS.gene03132.t1 MTR_7g072480 46.349 315 160 2 16 330 11 316 4.61e-88 268
MS.gene03132.t1 MTR_5g014100 46.865 303 157 2 32 330 29 331 5.28e-88 268
MS.gene03132.t1 MTR_5g074740 44.615 325 169 4 9 330 5 321 2.65e-87 266
MS.gene03132.t1 MTR_7g107520 44.062 320 173 4 11 330 7 320 2.75e-87 266
MS.gene03132.t1 MTR_4g074995 45.768 319 150 4 15 330 10 308 3.41e-87 265
MS.gene03132.t1 MTR_5g074760 45.141 319 164 4 15 330 11 321 4.28e-87 266
MS.gene03132.t1 MTR_4g114210 44.099 322 165 7 15 330 8 320 7.06e-87 265
MS.gene03132.t1 MTR_3g466180 45.397 315 163 2 16 330 18 323 7.12e-87 265
MS.gene03132.t1 MTR_1g115900 42.679 321 173 4 13 331 11 322 1.20e-86 265
MS.gene03132.t1 MTR_5g049280 43.987 316 166 6 23 331 27 338 1.68e-86 265
MS.gene03132.t1 MTR_4g031140 42.308 312 175 3 25 336 24 330 1.81e-85 262
MS.gene03132.t1 MTR_5g074710 44.615 325 169 4 9 330 5 321 1.96e-85 261
MS.gene03132.t1 MTR_2g029880 60.185 216 72 3 139 354 7 208 2.76e-85 257
MS.gene03132.t1 MTR_5g074860 43.976 332 175 4 1 329 1 324 3.48e-85 261
MS.gene03132.t1 MTR_3g092990 42.633 319 180 2 14 331 11 327 8.52e-85 260
MS.gene03132.t1 MTR_2g008710 45.033 302 155 5 33 330 31 325 2.97e-84 258
MS.gene03132.t1 MTR_4g030890 43.087 311 172 3 24 334 95 400 7.09e-84 260
MS.gene03132.t1 MTR_4g133800 45.302 298 152 6 34 330 46 333 6.98e-83 255
MS.gene03132.t1 MTR_6g043240 47.541 305 142 8 29 330 42 331 4.49e-82 254
MS.gene03132.t1 MTR_3g467600 44.688 320 167 3 14 330 12 324 5.81e-82 253
MS.gene03132.t1 MTR_7g086820 42.157 306 168 5 27 332 18 314 3.08e-81 250
MS.gene03132.t1 MTR_5g016010 41.742 333 185 5 1 329 1 328 4.10e-80 248
MS.gene03132.t1 MTR_6g043280 43.902 328 160 7 16 332 20 334 5.79e-80 248
MS.gene03132.t1 MTR_4g074990 42.320 319 155 4 15 330 13 305 1.66e-79 246
MS.gene03132.t1 MTR_1g009750 45.277 307 160 5 28 330 26 328 1.20e-78 244
MS.gene03132.t1 MTR_4g087965 43.607 305 165 5 28 327 41 343 3.73e-78 243
MS.gene03132.t1 MTR_6g043460 43.730 311 162 6 29 337 36 335 4.56e-78 243
MS.gene03132.t1 MTR_5g022870 40.184 326 183 8 6 330 2 316 1.91e-77 241
MS.gene03132.t1 MTR_1g101830 42.484 306 170 4 25 330 23 322 2.24e-77 241
MS.gene03132.t1 MTR_2g437770 43.522 301 158 6 32 331 53 342 3.84e-77 241
MS.gene03132.t1 MTR_7g026990 40.468 299 168 3 33 331 35 323 5.20e-77 240
MS.gene03132.t1 MTR_1g086490 40.299 335 187 4 7 330 8 340 8.37e-77 240
MS.gene03132.t1 MTR_1g086320 39.697 330 189 4 7 330 8 333 1.36e-76 239
MS.gene03132.t1 MTR_1g038680 42.715 302 167 4 33 330 33 332 1.36e-76 239
MS.gene03132.t1 MTR_4g127670 45.215 303 156 5 28 326 23 319 3.30e-76 238
MS.gene03132.t1 MTR_8g075100 40.717 307 174 5 24 330 21 319 2.62e-75 235
MS.gene03132.t1 MTR_3g072190 47.104 259 128 2 72 330 2 251 5.78e-75 232
MS.gene03132.t1 MTR_4g095450 42.813 327 173 6 5 326 3 320 8.26e-75 234
MS.gene03132.t1 MTR_4g132490 40.000 325 187 5 9 330 8 327 1.12e-74 234
MS.gene03132.t1 MTR_6g027440 39.815 324 178 8 11 330 4 314 1.01e-72 229
MS.gene03132.t1 MTR_7g029030 40.483 331 185 5 1 330 1 320 3.99e-72 227
MS.gene03132.t1 MTR_3g092990 40.125 319 177 3 14 331 11 316 5.06e-72 227
MS.gene03132.t1 MTR_1g077000 38.623 334 188 7 1 330 7 327 5.91e-72 227
MS.gene03132.t1 MTR_4g074980 40.190 316 155 5 15 330 13 294 9.19e-72 225
MS.gene03132.t1 MTR_1g090760 40.549 328 185 6 9 330 7 330 1.58e-71 226
MS.gene03132.t1 MTR_1g025980 39.198 324 189 5 6 329 2 317 2.74e-71 225
MS.gene03132.t1 MTR_0155s0040 37.003 327 187 6 4 330 8 315 1.64e-69 220
MS.gene03132.t1 MTR_2g008160 40.514 311 173 6 25 330 20 323 4.01e-69 219
MS.gene03132.t1 MTR_2g099175 38.907 311 172 6 28 330 35 335 4.48e-69 220
MS.gene03132.t1 MTR_7g086870 39.935 308 167 7 27 331 20 312 1.61e-68 218
MS.gene03132.t1 MTR_1g009750 42.020 307 153 6 28 330 26 311 2.09e-68 217
MS.gene03132.t1 MTR_4g074980 44.177 249 128 3 15 260 13 253 3.76e-68 214
MS.gene03132.t1 MTR_5g074860 38.554 332 154 4 1 329 1 285 4.63e-65 208
MS.gene03132.t1 MTR_8g062780 37.580 314 188 4 25 334 19 328 1.32e-64 208
MS.gene03132.t1 MTR_5g033470 38.462 312 179 7 27 330 71 377 1.26e-63 207
MS.gene03132.t1 MTR_2g008730 37.888 322 164 6 14 330 11 301 1.29e-62 202
MS.gene03132.t1 MTR_2g067440 35.068 365 189 8 3 331 36 388 2.43e-62 204
MS.gene03132.t1 MTR_3g105790 39.355 310 178 4 24 330 20 322 2.44e-62 202
MS.gene03132.t1 MTR_0286s0010 39.228 311 178 7 25 330 30 334 4.85e-62 202
MS.gene03132.t1 MTR_6g008075 39.228 311 178 7 25 330 30 334 4.85e-62 202
MS.gene03132.t1 MTR_2g078610 35.511 352 186 8 14 327 55 403 6.31e-62 204
MS.gene03132.t1 MTR_2g077990 35.613 351 185 8 14 326 55 402 1.85e-61 202
MS.gene03132.t1 MTR_1g066710 38.511 309 177 5 27 331 25 324 3.82e-61 199
MS.gene03132.t1 MTR_1g066380 37.338 308 182 4 27 331 25 324 1.02e-58 193
MS.gene03132.t1 MTR_4g132110 37.013 308 181 5 32 335 35 333 1.64e-58 192
MS.gene03132.t1 MTR_1g066640 37.987 308 180 4 27 331 25 324 1.70e-58 192
MS.gene03132.t1 MTR_0147s0010 34.568 324 176 4 26 329 74 381 2.25e-57 191
MS.gene03132.t1 MTR_4g132110 36.741 313 180 6 32 335 35 338 2.95e-57 189
MS.gene03132.t1 MTR_1g066680 37.742 310 177 6 27 331 25 323 6.34e-57 188
MS.gene03132.t1 MTR_2g078280 35.191 341 180 8 14 316 55 392 9.65e-57 189
MS.gene03132.t1 MTR_2g067450 37.459 307 182 6 27 329 9 309 1.77e-55 184
MS.gene03132.t1 MTR_2g008160 35.370 311 154 6 25 330 20 288 4.85e-52 174
MS.gene03132.t1 MTR_1g066380 38.550 262 150 4 73 331 3 256 5.63e-48 163
MS.gene03132.t1 MTR_2g008160 44.382 178 95 3 25 202 20 193 2.99e-45 154
MS.gene03132.t1 MTR_3g072210 45.550 191 95 3 141 330 56 238 8.39e-45 154
MS.gene03132.t1 MTR_3g105790 39.916 238 137 3 96 330 12 246 8.00e-44 152
MS.gene03132.t1 MTR_5g074700 39.224 232 116 5 102 330 5 214 2.53e-42 147
MS.gene03132.t1 MTR_7g072490 36.948 249 94 3 75 323 2 187 2.51e-39 139
MS.gene03132.t1 MTR_3g072260 55.238 105 47 0 28 132 25 129 2.00e-34 124
MS.gene03132.t1 MTR_5g058120 43.558 163 79 3 164 326 6 155 1.52e-32 122
MS.gene03132.t1 MTR_2g029930 58.407 113 19 3 14 112 4 102 2.74e-32 117
MS.gene03132.t1 MTR_2g077980 32.857 280 145 10 91 331 11 286 4.97e-30 116
MS.gene03132.t1 MTR_2g078560 32.018 228 122 5 135 331 96 321 6.46e-28 111
MS.gene03132.t1 MTR_3g462850 40.411 146 76 6 193 331 9 150 8.80e-24 95.9
MS.gene03132.t1 MTR_7g086790 32.292 192 108 4 76 267 17 186 6.23e-22 92.4
MS.gene03132.t1 MTR_1g089005 40.000 125 68 2 15 133 1 124 4.01e-21 89.0
MS.gene03132.t1 MTR_1g098320 48.193 83 41 1 251 333 47 127 1.06e-17 79.3
MS.gene03132.t1 MTR_4g114220 47.059 85 35 2 49 133 23 97 1.79e-17 78.6
MS.gene03132.t1 MTR_6g048160 54.930 71 28 2 68 138 22 88 2.43e-17 76.6
MS.gene03132.t1 MTR_4g012865 45.070 71 39 0 26 96 74 144 4.56e-17 77.8
MS.gene03132.t1 MTR_5g074770 42.529 87 49 1 243 329 23 108 9.12e-16 72.8
MS.gene03132.t1 MTR_7g086810 31.405 121 57 1 27 147 4 98 1.02e-13 70.5
MS.gene03132.t1 MTR_7g107500 41.414 99 54 3 232 330 3 97 1.05e-13 66.6
MS.gene03132.t1 MTR_3g107060 26.471 272 152 8 44 314 91 315 2.61e-13 70.5
MS.gene03132.t1 MTR_4g031040 29.143 175 80 3 88 262 1 131 1.12e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03132.t1 AT5G06730 55.723 332 145 1 14 343 18 349 1.20e-132 383
MS.gene03132.t1 AT5G06720 56.467 317 138 0 14 330 17 333 1.11e-131 380
MS.gene03132.t1 AT2G38380 55.255 333 139 3 24 355 26 349 5.46e-128 371
MS.gene03132.t1 AT2G38390 53.754 333 144 3 24 355 26 349 1.91e-126 367
MS.gene03132.t1 AT3G49120 53.982 339 151 3 14 347 14 352 1.25e-123 360
MS.gene03132.t1 AT3G32980 55.385 325 143 2 25 347 27 351 5.04e-123 358
MS.gene03132.t1 AT4G08770 54.688 320 143 2 25 342 20 339 1.29e-120 352
MS.gene03132.t1 AT3G49110 54.769 325 145 2 25 347 29 353 4.26e-120 351
MS.gene03132.t1 AT4G08780 53.125 320 148 2 25 342 20 339 5.88e-117 343
MS.gene03132.t1 AT5G19880 52.751 309 143 2 25 330 21 329 9.55e-113 331
MS.gene03132.t1 AT2G18150 51.645 304 146 1 27 330 34 336 1.32e-108 321
MS.gene03132.t1 AT2G18140 51.656 302 145 1 29 330 35 335 5.49e-108 319
MS.gene03132.t1 AT5G66390 50.000 308 153 1 23 330 27 333 5.89e-107 317
MS.gene03132.t1 AT4G36430 51.623 308 148 1 24 331 25 331 6.92e-107 317
MS.gene03132.t1 AT5G19890 51.466 307 141 4 27 331 28 328 1.47e-103 308
MS.gene03132.t1 AT3G50990 50.163 307 152 1 24 330 36 341 4.46e-103 307
MS.gene03132.t1 AT1G44970 49.675 308 153 1 23 330 41 346 3.48e-101 302
MS.gene03132.t1 AT1G14550 48.366 306 150 3 26 330 23 321 3.10e-97 291
MS.gene03132.t1 AT5G05340 46.815 314 156 3 19 330 20 324 3.57e-96 289
MS.gene03132.t1 AT4G16270 47.855 303 153 4 29 330 50 348 7.75e-94 284
MS.gene03132.t1 AT1G14540 46.584 322 165 3 9 330 1 315 1.18e-93 282
MS.gene03132.t1 AT1G49570 45.574 305 161 3 27 328 46 348 9.45e-92 278
MS.gene03132.t1 AT1G68850 46.053 304 158 5 33 331 34 336 1.98e-90 275
MS.gene03132.t1 AT1G05260 42.515 334 181 7 1 331 1 326 1.56e-87 267
MS.gene03132.t1 AT2G41480 44.037 327 169 6 9 330 11 328 5.39e-86 263
MS.gene03132.t1 AT4G11290 42.154 325 183 4 8 330 5 326 6.15e-86 263
MS.gene03132.t1 AT5G58390 45.570 316 160 5 14 326 6 312 7.94e-85 259
MS.gene03132.t1 AT5G58400 44.343 327 167 5 3 326 7 321 1.06e-84 259
MS.gene03132.t1 AT2G35380 47.351 302 155 3 33 330 34 335 1.11e-84 260
MS.gene03132.t1 AT1G71695 45.779 308 155 6 29 333 44 342 2.24e-84 260
MS.gene03132.t1 AT3G03670 43.092 304 170 2 27 330 21 321 3.41e-84 258
MS.gene03132.t1 AT2G22420 42.025 326 177 4 15 340 16 329 1.55e-83 257
MS.gene03132.t1 AT2G18980 45.963 322 161 6 15 330 9 323 2.31e-83 256
MS.gene03132.t1 AT5G15180 42.903 310 166 6 25 330 27 329 1.02e-82 254
MS.gene03132.t1 AT3G21770 42.342 333 186 5 1 331 1 329 1.00e-81 252
MS.gene03132.t1 AT5G14130 43.711 318 170 5 18 330 17 330 1.70e-81 251
MS.gene03132.t1 AT5G64120 43.960 298 159 5 33 330 39 328 2.44e-81 251
MS.gene03132.t1 AT3G01190 42.105 323 178 7 9 330 7 321 2.97e-81 251
MS.gene03132.t1 AT5G14130 43.711 318 170 5 18 330 58 371 4.88e-81 252
MS.gene03132.t1 AT4G30170 44.984 309 159 5 26 330 24 325 5.12e-81 250
MS.gene03132.t1 AT1G05240 44.156 308 158 5 29 330 26 325 1.58e-80 249
MS.gene03132.t1 AT1G05250 44.156 308 158 5 29 330 26 325 1.58e-80 249
MS.gene03132.t1 AT5G51890 43.322 307 167 5 25 330 22 322 2.40e-79 246
MS.gene03132.t1 AT5G67400 42.331 326 181 4 9 330 7 329 2.78e-79 246
MS.gene03132.t1 AT5G17820 41.447 304 166 5 27 330 22 313 3.92e-79 245
MS.gene03132.t1 AT4G37530 43.042 309 171 3 25 330 23 329 2.55e-78 243
MS.gene03132.t1 AT5G17820 41.447 304 166 5 27 330 75 366 7.22e-78 243
MS.gene03132.t1 AT5G39580 41.265 332 177 8 1 330 4 319 6.97e-77 239
MS.gene03132.t1 AT4G25980 40.979 327 178 6 9 330 10 326 9.10e-77 239
MS.gene03132.t1 AT3G49960 41.718 326 180 5 9 330 10 329 4.24e-76 238
MS.gene03132.t1 AT4G37520 41.042 307 176 3 27 330 25 329 6.70e-74 232
MS.gene03132.t1 AT5G64110 44.371 302 155 7 33 330 38 330 8.75e-74 232
MS.gene03132.t1 AT4G37520 40.717 307 174 4 27 330 25 326 2.35e-72 228
MS.gene03132.t1 AT5G64100 42.193 301 161 7 33 330 41 331 2.82e-72 228
MS.gene03132.t1 AT2G39040 42.444 311 168 7 27 330 44 350 4.75e-72 228
MS.gene03132.t1 AT4G33420 38.226 327 188 7 4 330 13 325 6.67e-71 224
MS.gene03132.t1 AT4G33420 38.226 327 188 7 4 330 60 372 2.93e-70 224
MS.gene03132.t1 AT5G42180 39.628 323 185 7 8 329 3 316 4.31e-70 222
MS.gene03132.t1 AT2G34060 39.935 308 176 6 26 327 39 343 6.89e-69 220
MS.gene03132.t1 AT2G24800 40.909 308 171 5 27 330 29 329 7.96e-69 219
MS.gene03132.t1 AT4G33870 35.629 334 169 6 33 327 72 398 1.76e-67 218
MS.gene03132.t1 AT1G77100 39.514 329 183 7 7 330 2 319 2.39e-67 215
MS.gene03132.t1 AT5G24070 38.462 338 187 8 4 331 10 336 3.21e-67 215
MS.gene03132.t1 AT4G31760 38.387 310 183 3 23 330 23 326 4.13e-67 214
MS.gene03132.t1 AT4G37530 44.358 257 140 2 25 278 23 279 5.07e-67 213
MS.gene03132.t1 AT4G17690 39.216 306 175 5 29 331 26 323 5.52e-66 211
MS.gene03132.t1 AT5G40150 39.423 312 180 4 21 330 24 328 1.83e-65 210
MS.gene03132.t1 AT1G24110 38.037 326 193 6 8 330 3 322 4.30e-65 209
MS.gene03132.t1 AT5G47000 37.730 326 192 6 9 331 14 331 6.77e-65 209
MS.gene03132.t1 AT2G43480 38.608 316 173 8 25 330 31 335 1.20e-64 208
MS.gene03132.t1 AT4G26010 40.193 311 164 8 24 330 17 309 1.30e-64 207
MS.gene03132.t1 AT4G26010 40.193 311 164 8 24 330 45 337 1.70e-64 208
MS.gene03132.t1 AT3G28200 37.540 309 183 4 24 330 16 316 7.66e-63 203
MS.gene03132.t1 AT1G30870 38.816 304 173 6 33 333 55 348 2.63e-62 203
MS.gene03132.t1 AT5G22410 37.013 308 174 8 27 326 26 321 2.77e-61 199
MS.gene03132.t1 AT2G35380 45.344 247 131 3 88 330 1 247 1.40e-60 195
MS.gene03132.t1 AT1G34510 39.414 307 168 8 27 331 20 310 2.96e-60 196
MS.gene03132.t1 AT4G21960 37.829 304 176 5 32 331 34 328 3.07e-60 197
MS.gene03132.t1 AT3G17070 37.838 333 188 10 7 330 17 339 3.62e-58 192
MS.gene03132.t1 AT2G37130 36.570 309 184 5 26 330 27 327 9.55e-56 185
MS.gene03132.t1 AT2G37130 36.634 303 180 5 32 330 2 296 2.18e-54 181
MS.gene03132.t1 AT4G25980 40.773 233 125 5 9 236 55 279 3.35e-49 167
MS.gene03132.t1 AT5G39580 42.157 204 104 5 1 203 4 194 4.16e-41 144
MS.gene03132.t1 AT3G17070 37.546 269 149 10 71 330 18 276 5.58e-41 145
MS.gene03132.t1 AT2G24800 42.442 172 95 1 27 198 29 196 2.37e-37 135
MS.gene03132.t1 AT1G77490 28.137 263 151 9 63 314 106 341 1.49e-15 77.8
MS.gene03132.t1 AT1G77490 28.137 263 151 9 63 314 106 341 1.92e-15 77.4
MS.gene03132.t1 AT3G09640 25.352 213 117 5 103 313 74 246 3.42e-13 68.9
MS.gene03132.t1 AT3G09640 25.352 213 117 5 103 313 74 246 3.42e-13 68.9
MS.gene03132.t1 AT3G42570 31.507 146 87 4 53 196 15 149 3.06e-11 61.2

Find 67 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACAAGTGTTCCTGTAAA+AGG 0.264524 2.1:+61262173 None:intergenic
TAGGGCTGCTATGATCAAAA+TGG 0.283772 2.1:-61258990 MS.gene03132:CDS
GGAAATATTGGTGTGTTAAC+CGG 0.297989 2.1:-61258968 MS.gene03132:CDS
TCTAATCTCTCCTTGGTTCC+CGG 0.308228 2.1:+61258949 None:intergenic
CCTCTTAATGAGTTTCTGTT+TGG 0.310696 2.1:+61259836 None:intergenic
ATTTCAGGTGCTCATACATT+TGG 0.340486 2.1:-61259322 MS.gene03132:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2.1:+61259142 None:intergenic
CAGAAACTCATTAAGAGGTT+TGG 0.342785 2.1:-61259831 MS.gene03132:CDS
CGAACAATGGAACTAACATT+TGG 0.350033 2.1:+61262153 None:intergenic
AGGAGTCGTTGGATCGAAAT+TGG 0.358608 2.1:+61259162 None:intergenic
CCAAACAGAAACTCATTAAG+AGG 0.372095 2.1:-61259836 MS.gene03132:CDS
CCTGACTGGAAGGTTCCTTT+AGG 0.381585 2.1:-61259589 MS.gene03132:CDS
CAAGAGTTGTTCTCAACATC+TGG 0.390230 2.1:-61259076 MS.gene03132:CDS
ATGATCAAAATGGGAAATAT+TGG 0.401401 2.1:-61258980 MS.gene03132:CDS
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2.1:-61262234 MS.gene03132:CDS
CCATTGTTCGTGAAGTCATA+AGG 0.434806 2.1:-61262140 MS.gene03132:CDS
GAATTTGTTGACAATGCTAA+TGG 0.449121 2.1:+61259045 None:intergenic
GTATGCTTGCTAGTCTTGTC+AGG 0.452656 2.1:-61262095 MS.gene03132:CDS
AAACCATCTCTTCTTCCTAA+AGG 0.452959 2.1:+61259574 None:intergenic
ACTGATCTGGTTGCCCTCTC+CGG 0.453021 2.1:-61259454 MS.gene03132:intron
TTGTACAACTTCAGCGGTAC+GGG 0.454738 2.1:-61259268 MS.gene03132:CDS
AATCAAAACAGCTGTGGAAA+AGG 0.458727 2.1:-61259795 MS.gene03132:CDS
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.1:+61259767 None:intergenic
AATTCAAAATCAGCAGAACT+TGG 0.476123 2.1:-61258908 MS.gene03132:CDS
AAGTAAGTTGTGTTAAGAGT+TGG 0.480928 2.1:+61259235 None:intergenic
AGGTCTCGACACTACTGATC+TGG 0.490530 2.1:-61259467 MS.gene03132:CDS
AATAGGCAGATGGTCCTGAC+TGG 0.492532 2.1:-61259603 MS.gene03132:intron
AGATTCATCTGAGGAGGGTA+TGG 0.494872 2.1:-61258864 MS.gene03132:CDS
AGATGATAATTCAGCTGAAA+GGG 0.495878 2.1:+61259736 None:intergenic
CCTAAAGGAACCTTCCAGTC+AGG 0.502692 2.1:+61259589 None:intergenic
AGGGCTGCTATGATCAAAAT+GGG 0.502945 2.1:-61258989 MS.gene03132:CDS
TTCGTGCCAGGTCCACCATT+GGG 0.506163 2.1:+61259190 None:intergenic
TCAGTAGTATTGAAAGGAGC+TGG 0.514353 2.1:+61259517 None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG 0.517053 2.1:+61259240 None:intergenic
TCAAATTTATCAGGAGTCGT+TGG 0.517441 2.1:+61259151 None:intergenic
GAAATATTGGTGTGTTAACC+GGG 0.517789 2.1:-61258967 MS.gene03132:CDS
CCTTATGACTTCACGAACAA+TGG 0.525359 2.1:+61262140 None:intergenic
ATATGTCCCAATGGTGGACC+TGG 0.533119 2.1:-61259196 MS.gene03132:CDS
TACCGCTGAAGTTGTACAAT+CGG 0.535831 2.1:+61259272 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.538902 2.1:+61262203 None:intergenic
TAGATGATAATTCAGCTGAA+AGG 0.542694 2.1:+61259735 None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG 0.546841 2.1:+61259189 None:intergenic
AGTTCATCAGTAGTATTGAA+AGG 0.552774 2.1:+61259511 None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG 0.555195 2.1:+61259241 None:intergenic
AATAGCTTTGTGCTGTGTAG+TGG 0.557732 2.1:-61262244 MS.gene03132:CDS
AAAACTGCATTTGCTGCTCA+AGG 0.561218 2.1:-61259487 MS.gene03132:CDS
GGCAGATGGTCCTGACTGGA+AGG 0.562824 2.1:-61259599 MS.gene03132:CDS
ATTGTACAACTTCAGCGGTA+CGG 0.567546 2.1:-61259269 MS.gene03132:CDS
CTCAGCAGATTCATCTGAGG+AGG 0.567597 2.1:-61258870 MS.gene03132:CDS
AGTTGTGCATTTGAAGAGAA+GGG 0.569161 2.1:+61262204 None:intergenic
TCGTTGGATCGAAATTGGTA+AGG 0.570774 2.1:+61259167 None:intergenic
AAAATGTTACATACCGGAGA+GGG 0.575364 2.1:+61259441 None:intergenic
CAAGTGTTCCTGTAAAAGGA+TGG 0.579502 2.1:+61262177 None:intergenic
GTTCCTTTAGGAAGAAGAGA+TGG 0.584332 2.1:-61259577 MS.gene03132:CDS
AAATTGGTAAGGTTCGTGCC+AGG 0.584556 2.1:+61259178 None:intergenic
CGCACAATATGTCCCAATGG+TGG 0.600150 2.1:-61259202 MS.gene03132:CDS
AGCTGAATTATCATCTACAC+TGG 0.606092 2.1:-61259729 MS.gene03132:intron
GAATCAAATCAAAACAGCTG+TGG 0.608984 2.1:-61259801 MS.gene03132:CDS
GATGAAATAAAATAGGCAGA+TGG 0.618837 2.1:-61259613 MS.gene03132:intron
AGCCGATTGTACAACTTCAG+CGG 0.631715 2.1:-61259274 MS.gene03132:CDS
AGCATCTTGTTCACTCACAA+CGG 0.632766 2.1:+61259862 None:intergenic
CTCCTCAGATGAATCTGCTG+AGG 0.635056 2.1:+61258871 None:intergenic
TTGCGCACAATATGTCCCAA+TGG 0.640051 2.1:-61259205 MS.gene03132:CDS
GGTGTGTTAACCGGGAACCA+AGG 0.643371 2.1:-61258959 MS.gene03132:CDS
TCAGCAGATTCATCTGAGGA+GGG 0.667386 2.1:-61258869 MS.gene03132:CDS
ACAAGACTAGCAAGCATACG+AGG 0.681087 2.1:+61262099 None:intergenic
TGCCTCAGCAGATTCATCTG+AGG 0.692262 2.1:-61258873 MS.gene03132:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAAAAATAAAATT+TGG + chr2.1:61259946-61259965 None:intergenic 0.0%
!! AAAAAAAACTTAAAATAAAG+TGG + chr2.1:61260020-61260039 None:intergenic 10.0%
!! AATTCTATTAAAATTAAGTA+AGG - chr2.1:61260933-61260952 MS.gene03132:intron 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr2.1:61260611-61260630 None:intergenic 10.0%
!! TTTGTATAAAAAATTCTAAT+TGG - chr2.1:61261706-61261725 MS.gene03132:intron 10.0%
!!! AATGAATGATTTTATTTTAA+GGG + chr2.1:61259779-61259798 None:intergenic 10.0%
!!! TAATGAATGATTTTATTTTA+AGG + chr2.1:61259780-61259799 None:intergenic 10.0%
!!! TTAATATTTTTTACTATTAG+TGG + chr2.1:61259323-61259342 None:intergenic 10.0%
!! AAAATATATAGTATAGTTTG+AGG + chr2.1:61261424-61261443 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr2.1:61260861-61260880 MS.gene03132:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr2.1:61260520-61260539 None:intergenic 15.0%
!! AATTGAATTTGAAAATTCAT+TGG + chr2.1:61261456-61261475 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr2.1:61260742-61260761 MS.gene03132:intron 15.0%
!! CAAATATAGAAAAAACTTAT+TGG - chr2.1:61259636-61259655 MS.gene03132:intron 15.0%
!! CTTCTGTTTAATTAAAATAA+GGG - chr2.1:61259574-61259593 MS.gene03132:CDS 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + chr2.1:61260582-61260601 None:intergenic 15.0%
!!! ATAAGTAAATTTTTTTTTGC+AGG + chr2.1:61260550-61260569 None:intergenic 15.0%
!!! ATTTTTCAAAAAAGAAAGAT+TGG + chr2.1:61261067-61261086 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + chr2.1:61260583-61260602 None:intergenic 15.0%
!!! TAAGTAAATTTTTTTTTGCA+GGG + chr2.1:61260549-61260568 None:intergenic 15.0%
!!! TTTAAGTTTTTTTTTTTGAG+AGG - chr2.1:61260026-61260045 MS.gene03132:intron 15.0%
!! AAAACTTAAAATAAAGTGGA+CGG + chr2.1:61260016-61260035 None:intergenic 20.0%
!! AAAATGCATAAAAATATGCA+AGG - chr2.1:61259453-61259472 MS.gene03132:intron 20.0%
!! AAATTATTGCAAACTTAGTA+GGG - chr2.1:61260446-61260465 MS.gene03132:intron 20.0%
!! ACTTAAAAAATGTTACATAC+CGG + chr2.1:61261685-61261704 None:intergenic 20.0%
!! ATCAGTTATATAAAGTTATC+CGG - chr2.1:61261116-61261135 MS.gene03132:intron 20.0%
!! ATCTCTTTGTATTAATAAGT+AGG + chr2.1:61261008-61261027 None:intergenic 20.0%
!! ATGTACTAATTCTACTTAAA+TGG + chr2.1:61259211-61259230 None:intergenic 20.0%
!! CCTTCTGTTTAATTAAAATA+AGG - chr2.1:61259573-61259592 MS.gene03132:CDS 20.0%
!! GTGTTAAGAACATTATTAAA+AGG + chr2.1:61260807-61260826 None:intergenic 20.0%
!! TCATACTACTATAAGATTAT+AGG + chr2.1:61259183-61259202 None:intergenic 20.0%
!! TCTCTTTGTATTAATAAGTA+GGG + chr2.1:61261007-61261026 None:intergenic 20.0%
!! TGCTTAATATTTATAGCTTA+AGG - chr2.1:61259803-61259822 MS.gene03132:CDS 20.0%
!! TGTACTAATTCTACTTAAAT+GGG + chr2.1:61259210-61259229 None:intergenic 20.0%
!! TTGAAAAATAAAGTTATCCA+TGG - chr2.1:61261078-61261097 MS.gene03132:intron 20.0%
!!! AAAATAGCTTTTTTTTGTAG+TGG + chr2.1:61259498-61259517 None:intergenic 20.0%
!!! ATTTAACTTACTTAATAACC+CGG - chr2.1:61259379-61259398 MS.gene03132:intron 20.0%
!!! CCTTATTTTAATTAAACAGA+AGG + chr2.1:61259576-61259595 None:intergenic 20.0%
!!! CTATTTTTCACATATTTTGA+GGG - chr2.1:61259511-61259530 MS.gene03132:CDS 20.0%
!!! GATTTTTATTAGCAAGTAAT+TGG + chr2.1:61261578-61261597 None:intergenic 20.0%
!!! GTTTTGTGATGAAATAAAAT+AGG - chr2.1:61261497-61261516 MS.gene03132:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr2.1:61260831-61260850 None:intergenic 20.0%
!!! TAACTGATTTTAAAACCTTT+TGG + chr2.1:61261104-61261123 None:intergenic 20.0%
!!! TAGAAAAAGTTTCTTCTTTT+AGG - chr2.1:61259715-61259734 MS.gene03132:intron 20.0%
!!! TTAAGTTGTTCACATTTAAT+TGG - chr2.1:61260058-61260077 MS.gene03132:intron 20.0%
! AAAAATCTCTCTTGCTAAAA+AGG + chr2.1:61259850-61259869 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr2.1:61260872-61260891 MS.gene03132:intron 25.0%
! ACAATATAATGAGCAAAACA+GGG + chr2.1:61259125-61259144 None:intergenic 25.0%
! ATGATCAAAATGGGAAATAT+TGG - chr2.1:61262137-61262156 MS.gene03132:CDS 25.0%
! CAAATTATTGCAAACTTAGT+AGG - chr2.1:61260445-61260464 MS.gene03132:intron 25.0%
! CTACTAAGTTTGCAATAATT+TGG + chr2.1:61260447-61260466 None:intergenic 25.0%
! GATATAAATTCTTGACTTCT+TGG - chr2.1:61259153-61259172 MS.gene03132:CDS 25.0%
! TACAATATAATGAGCAAAAC+AGG + chr2.1:61259126-61259145 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG + chr2.1:61261978-61261997 None:intergenic 25.0%
! TATATATGTTTCTCGATTTC+AGG - chr2.1:61261780-61261799 MS.gene03132:intron 25.0%
! TCTAATCTTCAAGTGAAAAA+AGG - chr2.1:61262002-61262021 MS.gene03132:intron 25.0%
!! AGTAGGGTTAATTATGTTTT+TGG - chr2.1:61260462-61260481 MS.gene03132:intron 25.0%
!! AGTAGGGTTAATTATGTTTT+TGG + chr2.1:61260481-61260462 None:intergenic 25.0%
!! CTCAAAAAAAGCTTTTTGAT+CGG + chr2.1:61262102-61262121 None:intergenic 25.0%
!! TACAAGATCACAATTTTGTA+GGG + chr2.1:61260489-61260508 None:intergenic 25.0%
!! TTACAAGATCACAATTTTGT+AGG + chr2.1:61260490-61260509 None:intergenic 25.0%
!!! GCTATTTTTCACATATTTTG+AGG - chr2.1:61259510-61259529 MS.gene03132:CDS 25.0%
!!! TTTTGCGATATTTTTTTCGA+AGG - chr2.1:61260780-61260799 MS.gene03132:intron 25.0%
!!! TTTTTTTAACCAAGTTGCTT+GGG + chr2.1:61260350-61260369 None:intergenic 25.0%
!!! TTTTTTTTAACCAAGTTGCT+TGG + chr2.1:61260351-61260370 None:intergenic 25.0%
AAGTAAGGACTAAACTTACA+AGG - chr2.1:61260948-61260967 MS.gene03132:intron 30.0%
AAGTAAGTTGTGTTAAGAGT+TGG + chr2.1:61261885-61261904 None:intergenic 30.0%
AATTCAAAATCAGCAGAACT+TGG - chr2.1:61262209-61262228 MS.gene03132:CDS 30.0%
ACTAGTAGTATTTCACGATA+TGG - chr2.1:61259916-61259935 MS.gene03132:intron 30.0%
AGATGATAATTCAGCTGAAA+GGG + chr2.1:61261384-61261403 None:intergenic 30.0%
AGTTATATAAAGTTATCCGG+CGG - chr2.1:61261119-61261138 MS.gene03132:intron 30.0%
ATTGGTATATCCGTATAAGA+CGG - chr2.1:61260076-61260095 MS.gene03132:intron 30.0%
CTATTAGTGGTAGAATGTAT+AGG + chr2.1:61259310-61259329 None:intergenic 30.0%
GATGAAATAAAATAGGCAGA+TGG - chr2.1:61261504-61261523 MS.gene03132:intron 30.0%
TACTGACATGTTACATTCAA+TGG + chr2.1:61260126-61260145 None:intergenic 30.0%
TAGATGATAATTCAGCTGAA+AGG + chr2.1:61261385-61261404 None:intergenic 30.0%
TCATTTAGAAGCAATAGAGT+TGG - chr2.1:61259875-61259894 MS.gene03132:CDS 30.0%
! AGTTCATCAGTAGTATTGAA+AGG + chr2.1:61261609-61261628 None:intergenic 30.0%
! ATTGTTTTCTAATCTCTCCT+TGG + chr2.1:61262178-61262197 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr2.1:61260645-61260664 MS.gene03132:intron 30.0%
!! AAAAATAGCTTTGATTCAGC+CGG + chr2.1:61259401-61259420 None:intergenic 30.0%
!! AATCATTAATTTGTGCCTTG+AGG + chr2.1:61259616-61259635 None:intergenic 30.0%
!! ATCATTAATTTGTGCCTTGA+GGG + chr2.1:61259615-61259634 None:intergenic 30.0%
!! GAATTTGTTGACAATGCTAA+TGG + chr2.1:61262075-61262094 None:intergenic 30.0%
!! TCATTTTTCCAACTCAAGTT+TGG + chr2.1:61259360-61259379 None:intergenic 30.0%
!!! AAGCTTTTTTTGAGAGCTTT+AGG - chr2.1:61262108-61262127 MS.gene03132:CDS 30.0%
!!! AGCTTTTTTTGAGAGCTTTA+GGG - chr2.1:61262109-61262128 MS.gene03132:CDS 30.0%
!!! ATTTTAAAACCTTTTGGCCA+TGG + chr2.1:61261098-61261117 None:intergenic 30.0%
!!! GAGTGCAGAATTTTTTTGTA+GGG - chr2.1:61260904-61260923 MS.gene03132:intron 30.0%
!!! TGAGTGCAGAATTTTTTTGT+AGG - chr2.1:61260903-61260922 MS.gene03132:intron 30.0%
!!! TTTTTTTCTTTGTTTCGCAC+CGG - chr2.1:61260202-61260221 MS.gene03132:intron 30.0%
AAAAATGTTACATACCGGAG+AGG + chr2.1:61261680-61261699 None:intergenic 35.0%
AAAACTCAGTATCTGATCCA+AGG - chr2.1:61259963-61259982 MS.gene03132:intron 35.0%
AAAATGTTACATACCGGAGA+GGG + chr2.1:61261679-61261698 None:intergenic 35.0%
AAACCATCTCTTCTTCCTAA+AGG + chr2.1:61261546-61261565 None:intergenic 35.0%
AAGTTGTGCATTTGAAGAGA+AGG + chr2.1:61258917-61258936 None:intergenic 35.0%
AATCAAAACAGCTGTGGAAA+AGG - chr2.1:61261322-61261341 MS.gene03132:intron 35.0%
AGCTGAATTATCATCTACAC+TGG - chr2.1:61261388-61261407 MS.gene03132:intron 35.0%
AGTTGTGCATTTGAAGAGAA+GGG + chr2.1:61258916-61258935 None:intergenic 35.0%
AGTTGTGTTAAGAGTTGGAT+CGG + chr2.1:61261880-61261899 None:intergenic 35.0%
ATGTGATCCATGATTGTAAC+AGG - chr2.1:61261196-61261215 MS.gene03132:intron 35.0%
CAGAAACTCATTAAGAGGTT+TGG - chr2.1:61261286-61261305 MS.gene03132:intron 35.0%
CATAAAAATATGCAAGGTCC+GGG - chr2.1:61259459-61259478 MS.gene03132:CDS 35.0%
CCAAACAGAAACTCATTAAG+AGG - chr2.1:61261281-61261300 MS.gene03132:intron 35.0%
CCTCTTAATGAGTTTCTGTT+TGG + chr2.1:61261284-61261303 None:intergenic 35.0%
CGAACAATGGAACTAACATT+TGG + chr2.1:61258967-61258986 None:intergenic 35.0%
GAAATATTGGTGTGTTAACC+GGG - chr2.1:61262150-61262169 MS.gene03132:CDS 35.0%
GAATCAAATCAAAACAGCTG+TGG - chr2.1:61261316-61261335 MS.gene03132:intron 35.0%
GCATAAAAATATGCAAGGTC+CGG - chr2.1:61259458-61259477 MS.gene03132:CDS 35.0%
GGAAATATTGGTGTGTTAAC+CGG - chr2.1:61262149-61262168 MS.gene03132:CDS 35.0%
TAAAGTTATCCATGGCCAAA+AGG - chr2.1:61261086-61261105 MS.gene03132:intron 35.0%
TATACCTACCAAACTTGAGT+TGG - chr2.1:61259349-61259368 MS.gene03132:intron 35.0%
TCAAATTTATCAGGAGTCGT+TGG + chr2.1:61261969-61261988 None:intergenic 35.0%
TGTGATCCATGATTGTAACA+GGG - chr2.1:61261197-61261216 MS.gene03132:intron 35.0%
TTTCTTAACATGTGCCCTAA+GGG - chr2.1:61259738-61259757 MS.gene03132:CDS 35.0%
! AACTTGATCCATCCTTTTAC+AGG - chr2.1:61258932-61258951 MS.gene03132:CDS 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.1:61261795-61261814 MS.gene03132:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr2.1:61260964-61260983 MS.gene03132:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr2.1:61260963-61260982 MS.gene03132:intron 35.0%
! TTTTCCAACTCAAGTTTGGT+AGG + chr2.1:61259356-61259375 None:intergenic 35.0%
!! AAAATAGCTTTGATTCAGCC+GGG + chr2.1:61259400-61259419 None:intergenic 35.0%
!!! TAGCTTTTTTTTGTAGTGGC+CGG + chr2.1:61259494-61259513 None:intergenic 35.0%
AGCATCTTGTTCACTCACAA+CGG + chr2.1:61261258-61261277 None:intergenic 40.0%
AGGGCTGCTATGATCAAAAT+GGG - chr2.1:61262128-61262147 MS.gene03132:CDS 40.0%
ATTGTACAACTTCAGCGGTA+CGG - chr2.1:61261848-61261867 MS.gene03132:intron 40.0%
CAAGAGTTGTTCTCAACATC+TGG - chr2.1:61262041-61262060 MS.gene03132:intron 40.0%
CAAGTGTTCCTGTAAAAGGA+TGG + chr2.1:61258943-61258962 None:intergenic 40.0%
CCATTGTTCGTGAAGTCATA+AGG - chr2.1:61258977-61258996 MS.gene03132:CDS 40.0%
CCTTATGACTTCACGAACAA+TGG + chr2.1:61258980-61258999 None:intergenic 40.0%
GATTTGTCCCTCGAATTAGT+CGG + chr2.1:61259990-61260009 None:intergenic 40.0%
GTGTTGAATGATTAGTGCTG+AGG + chr2.1:61260375-61260394 None:intergenic 40.0%
GTTCGAATCACCGTCTTATA+CGG + chr2.1:61260089-61260108 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+GGG + chr2.1:61261879-61261898 None:intergenic 40.0%
GTTTCTTAACATGTGCCCTA+AGG - chr2.1:61259737-61259756 MS.gene03132:CDS 40.0%
TACCGCTGAAGTTGTACAAT+CGG + chr2.1:61261848-61261867 None:intergenic 40.0%
TAGGGCTGCTATGATCAAAA+TGG - chr2.1:61262127-61262146 MS.gene03132:CDS 40.0%
TCACAACCCTGTTACAATCA+TGG + chr2.1:61261206-61261225 None:intergenic 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.1:61261353-61261372 None:intergenic 40.0%
TCGTTGGATCGAAATTGGTA+AGG + chr2.1:61261953-61261972 None:intergenic 40.0%
TGGACAAGTGTTCCTGTAAA+AGG + chr2.1:61258947-61258966 None:intergenic 40.0%
! AAAACTGCATTTGCTGCTCA+AGG - chr2.1:61261630-61261649 MS.gene03132:intron 40.0%
! GTTCCTTTAGGAAGAAGAGA+TGG - chr2.1:61261540-61261559 MS.gene03132:intron 40.0%
! TCAGTAGTATTGAAAGGAGC+TGG + chr2.1:61261603-61261622 None:intergenic 40.0%
!! AATAGCTTTGTGCTGTGTAG+TGG - chr2.1:61258873-61258892 MS.gene03132:CDS 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr2.1:61259598-61259617 MS.gene03132:CDS 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG + chr2.1:61259755-61259774 None:intergenic 40.0%
!! GAATGTATAGGAGCATCACA+AGG + chr2.1:61259298-61259317 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG + chr2.1:61259756-61259775 None:intergenic 40.0%
!!! AGCTTTTTTTTGTAGTGGCC+GGG + chr2.1:61259493-61259512 None:intergenic 40.0%
AAATTGGTAAGGTTCGTGCC+AGG + chr2.1:61261942-61261961 None:intergenic 45.0%
ACAAGACTAGCAAGCATACG+AGG + chr2.1:61259021-61259040 None:intergenic 45.0%
AGATTCATCTGAGGAGGGTA+TGG - chr2.1:61262253-61262272 MS.gene03132:CDS 45.0%
AGCCGATTGTACAACTTCAG+CGG - chr2.1:61261843-61261862 MS.gene03132:intron 45.0%
AGGAGTCGTTGGATCGAAAT+TGG + chr2.1:61261958-61261977 None:intergenic 45.0%
GTGCATATTATTGTAGCCGC+CGG + chr2.1:61261138-61261157 None:intergenic 45.0%
TCAGCAGATTCATCTGAGGA+GGG - chr2.1:61262248-61262267 MS.gene03132:CDS 45.0%
TCTAATCTCTCCTTGGTTCC+CGG + chr2.1:61262171-61262190 None:intergenic 45.0%
TTGCGCACAATATGTCCCAA+TGG - chr2.1:61261912-61261931 MS.gene03132:intron 45.0%
TTGTACAACTTCAGCGGTAC+GGG - chr2.1:61261849-61261868 MS.gene03132:intron 45.0%
!! GTATGCTTGCTAGTCTTGTC+AGG - chr2.1:61259022-61259041 MS.gene03132:CDS 45.0%
!! TTTTCTTTGTTTCGCACCGG+TGG - chr2.1:61260205-61260224 MS.gene03132:intron 45.0%
!!! GCTTTTTTTTGTAGTGGCCG+GGG + chr2.1:61259492-61259511 None:intergenic 45.0%
!! ATATAATATAAATTAGAATA+AGG - chr2.1:61259237-61259256 MS.gene03132:CDS 5.0%
AATAGGCAGATGGTCCTGAC+TGG - chr2.1:61261514-61261533 MS.gene03132:intron 50.0%
AGGTCTCGACACTACTGATC+TGG - chr2.1:61261650-61261669 MS.gene03132:intron 50.0%
CCAAGGACCGACTAATTCGA+GGG - chr2.1:61259980-61259999 MS.gene03132:intron 50.0%
CCTAAAGGAACCTTCCAGTC+AGG + chr2.1:61261531-61261550 None:intergenic 50.0%
CCTGACTGGAAGGTTCCTTT+AGG - chr2.1:61261528-61261547 MS.gene03132:intron 50.0%
CGCACAATATGTCCCAATGG+TGG - chr2.1:61261915-61261934 MS.gene03132:intron 50.0%
CTCAGCAGATTCATCTGAGG+AGG - chr2.1:61262247-61262266 MS.gene03132:CDS 50.0%
CTCCTCAGATGAATCTGCTG+AGG + chr2.1:61262249-61262268 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr2.1:61259430-61259449 MS.gene03132:intron 50.0%
TCCAAGGACCGACTAATTCG+AGG - chr2.1:61259979-61259998 MS.gene03132:intron 50.0%
TGCCTCAGCAGATTCATCTG+AGG - chr2.1:61262244-61262263 MS.gene03132:CDS 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG - chr2.1:61258883-61258902 MS.gene03132:CDS 50.0%
TTCCCAGAGGGAACAACTCT+TGG + chr2.1:61260273-61260292 None:intergenic 50.0%
!! ATATGTCCCAATGGTGGACC+TGG - chr2.1:61261921-61261940 MS.gene03132:intron 50.0%
ACTGATCTGGTTGCCCTCTC+CGG - chr2.1:61261663-61261682 MS.gene03132:intron 55.0%
ATACCGGGTTCGATTCCCAG+AGG + chr2.1:61260286-61260305 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr2.1:61259429-61259448 None:intergenic 55.0%
CCCTCGAATTAGTCGGTCCT+TGG + chr2.1:61259983-61260002 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr2.1:61259426-61259445 MS.gene03132:intron 55.0%
CTAATCCGGCTCATGCGTAG+AGG - chr2.1:61260235-61260254 MS.gene03132:intron 55.0%
GAATCGAACCCGGTATTCCC+CGG - chr2.1:61260290-61260309 MS.gene03132:intron 55.0%
GGCCAAGAGTTGTTCCCTCT+GGG - chr2.1:61260268-61260287 MS.gene03132:intron 55.0%
GGTGTGTTAACCGGGAACCA+AGG - chr2.1:61262158-61262177 MS.gene03132:CDS 55.0%
TACCGGGTTCGATTCCCAGA+GGG + chr2.1:61260285-61260304 None:intergenic 55.0%
TGGCCAAGAGTTGTTCCCTC+TGG - chr2.1:61260267-61260286 MS.gene03132:intron 55.0%
TTCGTGCCAGGTCCACCATT+GGG + chr2.1:61261930-61261949 None:intergenic 55.0%
! TTCCCTCTGGGAATCGAACC+CGG - chr2.1:61260280-61260299 MS.gene03132:intron 55.0%
AAGGTCCGGGCTTCAAACCC+CGG - chr2.1:61259472-61259491 MS.gene03132:CDS 60.0%
AGGACGTGTCCGGGGAATAC+CGG + chr2.1:61260302-61260321 None:intergenic 60.0%
CCAAGTTGCTTGGGCTCCAG+TGG + chr2.1:61260341-61260360 None:intergenic 60.0%
CCACTGGAGCCCAAGCAACT+TGG - chr2.1:61260338-61260357 MS.gene03132:intron 60.0%
CCGGTGGTGCACGACTAATC+CGG - chr2.1:61260221-61260240 MS.gene03132:intron 60.0%
CTCCTTCCAAGGACGTGTCC+GGG + chr2.1:61260311-61260330 None:intergenic 60.0%
GCATGCCTCTACGCATGAGC+CGG + chr2.1:61260243-61260262 None:intergenic 60.0%
GCTCCTTCCAAGGACGTGTC+CGG + chr2.1:61260312-61260331 None:intergenic 60.0%
GGCAGATGGTCCTGACTGGA+AGG - chr2.1:61261518-61261537 MS.gene03132:intron 60.0%
GTATTCCCCGGACACGTCCT+TGG - chr2.1:61260302-61260321 MS.gene03132:intron 60.0%
GTGGCAAGGAGCTCCTTCCA+AGG + chr2.1:61260322-61260341 None:intergenic 60.0%
GTTCGTGCCAGGTCCACCAT+TGG + chr2.1:61261931-61261950 None:intergenic 60.0%
TCCTTCCAAGGACGTGTCCG+GGG + chr2.1:61260310-61260329 None:intergenic 60.0%
TGGAAGGAGCTCCTTGCCAC+TGG - chr2.1:61260322-61260341 MS.gene03132:intron 60.0%
TTGCTTGGGCTCCAGTGGCA+AGG + chr2.1:61260336-61260355 None:intergenic 60.0%
! ATGCGTAGAGGCATGCGCAC+TGG - chr2.1:61260247-61260266 MS.gene03132:intron 60.0%
!! CCGGATTAGTCGTGCACCAC+CGG + chr2.1:61260224-61260243 None:intergenic 60.0%
GGACGTGTCCGGGGAATACC+GGG + chr2.1:61260301-61260320 None:intergenic 65.0%
TCCCCGGACACGTCCTTGGA+AGG - chr2.1:61260306-61260325 MS.gene03132:intron 65.0%
! AGTGGCCGGGGTTTGAAGCC+CGG + chr2.1:61259480-61259499 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 61258850 61262289 61258850 ID=MS.gene03132
chr2.1 mRNA 61258850 61262289 61258850 ID=MS.gene03132.t1;Parent=MS.gene03132
chr2.1 exon 61262068 61262289 61262068 ID=MS.gene03132.t1.exon1;Parent=MS.gene03132.t1
chr2.1 CDS 61262068 61262289 61262068 ID=cds.MS.gene03132.t1;Parent=MS.gene03132.t1
chr2.1 exon 61259730 61259921 61259730 ID=MS.gene03132.t1.exon2;Parent=MS.gene03132.t1
chr2.1 CDS 61259730 61259921 61259730 ID=cds.MS.gene03132.t1;Parent=MS.gene03132.t1
chr2.1 exon 61259455 61259620 61259455 ID=MS.gene03132.t1.exon3;Parent=MS.gene03132.t1
chr2.1 CDS 61259455 61259620 61259455 ID=cds.MS.gene03132.t1;Parent=MS.gene03132.t1
chr2.1 exon 61258850 61259337 61258850 ID=MS.gene03132.t1.exon4;Parent=MS.gene03132.t1
chr2.1 CDS 61258850 61259337 61258850 ID=cds.MS.gene03132.t1;Parent=MS.gene03132.t1
Gene Sequence

>MS.gene03132

ATGAACTCTCTTCGTGCTGTAGCAATAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGAGTTACCCTTCTCTTCAAATGCACAACTTGATCCATCCTTTTACAGGAACACTTGTCCAAATGTTAGTTCCATTGTTCGTGAAGTCATAAGGAGTGTTTCTAAGAAAGATCCTCGTATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGTATGTATACTTTCTAGTTTTTGCATATTCATTCATTCACTCACTACATGCCCTGTTTTGCTCATTATATTGTACGTGTATGATATAAATTCTTGACTTCTTGGTATACCTATAATCTTATAGTAGTATGATCTTCCCATTTAAGTAGAATTAGTACATAGTAAGATATAATATAAATTAGAATAAGGTCAAATATAGCAAATAAATGATATATTTAGCATATCCTTGTGATGCTCCTATACATTCTACCACTAATAGTAAAAAATATTAAGTAATATATACCTACCAAACTTGAGTTGGAAAAATGATTTAACTTACTTAATAACCCGGCTGAATCAAAGCTATTTTTCACGTCCTCGTGAGCTTAGCTCAGTTGGTTGGAAAATGCATAAAAATATGCAAGGTCCGGGCTTCAAACCCCGGCCACTACAAAAAAAAGCTATTTTTCACATATTTTGAGGGTTAAAATGAATAACAAATAGAATACTATTAAATGTTTTGCCTTCTGTTTAATTAAAATAAGGGAAATGTTAACTTGTGCCCTCAAGGCACAAATTAATGATTCAAATATAGAAAAAACTTATTGGAATGTGTGCATTGCATTTAATATTTAACTTTTTAATCATTTAAATGCACAAAATTTTAGAAAAAGTTTCTTCTTTTAGGTTTCTTAACATGTGCCCTAAGGGCACAAGTTAACACTACCCTTAAAATAAAATCATTCATTAGTATGCTTAATATTTATAGCTTAAGGTGTATCGATAACTCTTTTTTTCCTTTTTAGCAAGAGAGATTTTTTTGACTCATTTAGAAGCAATAGAGTTGGATCTATCTAGCTATAATAACTAGTAGTATTTCACGATATGGTGTACCAAATTTTATTTTTTTTAAAAAACTCAGTATCTGATCCAAGGACCGACTAATTCGAGGGACAAATCTCACCGTCCACTTTATTTTAAGTTTTTTTTTTTGAGAGGCACTTTATTTTAAGTTGTTCACATTTAATTGGTATATCCGTATAAGACGGTGATTCGAACAAGATTAATTATATCCATTGAATGTAACATGTCAGTAATTAATAAAAAAATACATTATTAATTTTCTCAAAAAAAAAAAAAACATTATAACATTTTTTTTCTTTGTTTCGCACCGGTGGTGCACGACTAATCCGGCTCATGCGTAGAGGCATGCGCACTGGCCAAGAGTTGTTCCCTCTGGGAATCGAACCCGGTATTCCCCGGACACGTCCTTGGAAGGAGCTCCTTGCCACTGGAGCCCAAGCAACTTGGTTAAAAAAAAACCTCAGCACTAATCATTCAACACTCTATTTTCAATGTTTTCTAATTCTAATACACAGTAAAAAAAAAAAACTCCAAATTATTGCAAACTTAGTAGGGTTAATTATGTTTTTGGTCCCTACAAAATTGTGATCTTGTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTATAATCCCTGCAAAAAAAAATTTACTTATAATTTTAGTCCCTGCTAAAATAAATTTTGTTTAATTATCCTTAAACTCTTAAATTTTTTAACGATTCTTTTTATACAAGTTTAGAACACTATGAAAGGTTCATTTACTAAAATCTATAATTTTTTAACATGAAATAAATTAAATATGAATTTTTTAAAACGACAAAAGTTTAAGATATAAGTAACAAAAATATGGACGTAAAAATCAAATTTTTGCGATATTTTTTTCGAAGGACCTTTTAATAATGTTCTTAACACGCCTGTAAAAAATTGTTGAAAAACTTAAGAGTTTAAGCATAAATTAAACAAATTTGGATTGAGTAAGGACTAATATTGAGTGCAGAATTTTTTTGTAGGGATTAAAAATTCTATTAAAATTAAGTAAGGACTAAACTTACAAGGTCGCAATTTTGTAGGGACCAAAAACATAATTAACCCTACTTATTAATACAAAGAGATTGTATAAAGTACTATTTCTTTTTTAAATATTTCAATCCAATCTTTCTTTTTTGAAAAATAAAGTTATCCATGGCCAAAAGGTTTTAAAATCAGTTATATAAAGTTATCCGGCGGCTACAATAATATGCACAATATCATTATGCTTTTGTTATAACAATAGTTTTCATTATGTGATCCATGATTGTAACAGGGTTGTGATGCATCAGTTTTACTAAACAAAACTGATACCGTTGTGAGTGAACAAGATGCTTTTCCAAACAGAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAAGGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCCCTTTCAGCTGAATTATCATCTACACTGGTATATATATTCCTCAAACTATACTATATATTTTTCTCATTTACCAATGAATTTTCAAATTCAATTTCTTATTAACTCTGCTTATTTGTTTTGTGATGAAATAAAATAGGCAGATGGTCCTGACTGGAAGGTTCCTTTAGGAAGAAGAGATGGTTTAACAGCAAACCAATTACTTGCTAATAAAAATCTTCCAGCTCCTTTCAATACTACTGATGAACTTAAAACTGCATTTGCTGCTCAAGGTCTCGACACTACTGATCTGGTTGCCCTCTCCGGTATGTAACATTTTTTAAGTTTTTGTATAAAAAATTCTAATTGGTCGTTACAATGATGACGCGAATGTTACAATAATAATATATATGATTATGTATATATATGTTTCTCGATTTCAGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGCCGATTGTACAACTTCAGCGGTACGGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTATTACTCTAATCTTCAAGTGAAAAAAGGTTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTTCAGATACCATTAGCATTGTCAACAAATTCGCAACCGATCAAAAAGCTTTTTTTGAGAGCTTTAGGGCTGCTATGATCAAAATGGGAAATATTGGTGTGTTAACCGGGAACCAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCAGCAGAACTTGGTCTTATCAATGTTGCCTCAGCAGATTCATCTGAGGAGGGTATGGTTAGCTCAATGTAA
Protein sequence

>MS.gene03132.t1

MNSLRAVAIALCCVVVVLGELPFSSNAQLDPSFYRNTCPNVSSIVREVIRSVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVVSEQDAFPNRNSLRGLDVVNQIKTAVEKACPNTVSCADILALSAELSSTLADGPDWKVPLGRRDGLTANQLLANKNLPAPFNTTDELKTAFAAQGLDTTDLVALSGAHTFGRAHCSLFVSRLYNFSGTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGSDTISIVNKFATDQKAFFESFRAAMIKMGNIGVLTGNQGEIRKQCNFVNSKSAELGLINVASADSSEEGMVSSM