Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74558.t1 | XP_003594495.2 | 98.6 | 355 | 5 | 0 | 1 | 355 | 1 | 355 | 4.50E-193 | 683.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74558.t1 | Q9LEH3 | 64.5 | 307 | 108 | 1 | 24 | 329 | 21 | 327 | 3.6e-106 | 386.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74558.t1 | G7IJU3 | 98.6 | 355 | 5 | 0 | 1 | 355 | 1 | 355 | 3.3e-193 | 683.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050060 | MS.gene74558 | 0.800128 | 1.67E-48 | -1.69E-46 |
MS.gene05316 | MS.gene74558 | 0.827976 | 1.16E-54 | -1.69E-46 |
MS.gene056233 | MS.gene74558 | 0.820275 | 7.47E-53 | -1.69E-46 |
MS.gene056659 | MS.gene74558 | 0.802076 | 6.66E-49 | -1.69E-46 |
MS.gene057396 | MS.gene74558 | 0.825042 | 5.81E-54 | -1.69E-46 |
MS.gene061159 | MS.gene74558 | 0.83433 | 3.19E-56 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74558.t1 | MTR_2g029830 | 98.592 | 355 | 5 | 0 | 1 | 355 | 1 | 355 | 0.0 | 713 |
MS.gene74558.t1 | MTR_2g029820 | 80.952 | 357 | 63 | 2 | 1 | 354 | 1 | 355 | 0.0 | 591 |
MS.gene74558.t1 | MTR_2g029815 | 82.184 | 348 | 61 | 1 | 1 | 347 | 1 | 348 | 0.0 | 587 |
MS.gene74558.t1 | MTR_2g029800 | 82.029 | 345 | 57 | 2 | 1 | 342 | 1 | 343 | 0.0 | 579 |
MS.gene74558.t1 | MTR_2g029830 | 98.582 | 282 | 4 | 0 | 74 | 355 | 6 | 287 | 0.0 | 567 |
MS.gene74558.t1 | MTR_2g028980 | 71.508 | 358 | 96 | 3 | 1 | 355 | 1 | 355 | 0.0 | 519 |
MS.gene74558.t1 | MTR_2g029740 | 71.229 | 358 | 97 | 3 | 1 | 355 | 1 | 355 | 0.0 | 513 |
MS.gene74558.t1 | MTR_2g029750 | 70.670 | 358 | 98 | 3 | 1 | 355 | 1 | 354 | 0.0 | 511 |
MS.gene74558.t1 | MTR_2g029860 | 70.455 | 352 | 96 | 3 | 4 | 353 | 6 | 351 | 2.98e-179 | 501 |
MS.gene74558.t1 | MTR_2g029850 | 71.629 | 356 | 92 | 4 | 1 | 353 | 1 | 350 | 6.06e-179 | 500 |
MS.gene74558.t1 | MTR_2g029560 | 68.358 | 335 | 99 | 1 | 1 | 335 | 4 | 331 | 5.20e-167 | 469 |
MS.gene74558.t1 | MTR_2g029910 | 67.529 | 348 | 105 | 4 | 7 | 353 | 11 | 351 | 1.10e-165 | 466 |
MS.gene74558.t1 | MTR_2g029730 | 67.470 | 332 | 101 | 1 | 4 | 335 | 8 | 332 | 3.52e-163 | 460 |
MS.gene74558.t1 | MTR_7g093370 | 59.568 | 324 | 126 | 2 | 7 | 329 | 52 | 371 | 1.32e-134 | 389 |
MS.gene74558.t1 | MTR_1g054205 | 56.575 | 327 | 139 | 2 | 4 | 329 | 2 | 326 | 1.41e-129 | 374 |
MS.gene74558.t1 | MTR_5g021060 | 52.318 | 302 | 143 | 1 | 28 | 329 | 30 | 330 | 3.05e-111 | 327 |
MS.gene74558.t1 | MTR_8g076820 | 50.165 | 303 | 150 | 1 | 28 | 330 | 30 | 331 | 5.35e-108 | 319 |
MS.gene74558.t1 | MTR_4g125940 | 50.755 | 331 | 158 | 3 | 2 | 330 | 3 | 330 | 2.71e-107 | 317 |
MS.gene74558.t1 | MTR_2g040000 | 48.773 | 326 | 160 | 3 | 8 | 330 | 11 | 332 | 4.20e-104 | 309 |
MS.gene74558.t1 | MTR_5g017860 | 48.916 | 323 | 155 | 4 | 8 | 329 | 13 | 326 | 7.46e-104 | 308 |
MS.gene74558.t1 | MTR_2g084080 | 46.933 | 326 | 164 | 2 | 4 | 329 | 1 | 317 | 1.85e-101 | 302 |
MS.gene74558.t1 | MTR_5g017850 | 47.059 | 323 | 161 | 4 | 8 | 329 | 13 | 326 | 1.24e-100 | 300 |
MS.gene74558.t1 | MTR_4g125940 | 55.072 | 276 | 120 | 2 | 57 | 330 | 2 | 275 | 1.21e-99 | 296 |
MS.gene74558.t1 | MTR_1g022970 | 49.338 | 302 | 153 | 0 | 28 | 329 | 46 | 347 | 3.88e-99 | 297 |
MS.gene74558.t1 | MTR_3g072190 | 46.769 | 325 | 162 | 3 | 7 | 329 | 3 | 318 | 1.12e-98 | 295 |
MS.gene74558.t1 | MTR_3g094650 | 48.287 | 321 | 152 | 4 | 7 | 325 | 10 | 318 | 8.20e-98 | 293 |
MS.gene74558.t1 | MTR_7g072510 | 48.026 | 304 | 149 | 2 | 26 | 329 | 18 | 312 | 4.83e-97 | 291 |
MS.gene74558.t1 | MTR_2g084000 | 47.706 | 327 | 162 | 3 | 4 | 329 | 1 | 319 | 6.33e-97 | 290 |
MS.gene74558.t1 | MTR_2g084110 | 45.706 | 326 | 168 | 2 | 4 | 329 | 1 | 317 | 1.03e-96 | 290 |
MS.gene74558.t1 | MTR_3g466200 | 47.546 | 326 | 156 | 5 | 7 | 329 | 7 | 320 | 6.13e-96 | 288 |
MS.gene74558.t1 | MTR_4g029200 | 48.387 | 310 | 151 | 2 | 20 | 329 | 38 | 338 | 1.60e-95 | 288 |
MS.gene74558.t1 | MTR_2g084090 | 45.872 | 327 | 167 | 3 | 4 | 329 | 1 | 318 | 1.82e-95 | 287 |
MS.gene74558.t1 | MTR_5g074970 | 46.970 | 330 | 160 | 5 | 4 | 329 | 8 | 326 | 4.14e-95 | 286 |
MS.gene74558.t1 | MTR_4g083710 | 47.006 | 334 | 162 | 5 | 1 | 329 | 1 | 324 | 5.44e-95 | 286 |
MS.gene74558.t1 | MTR_2g084020 | 45.399 | 326 | 170 | 2 | 4 | 329 | 1 | 318 | 3.31e-94 | 283 |
MS.gene74558.t1 | MTR_2g084010 | 45.706 | 326 | 169 | 2 | 4 | 329 | 1 | 318 | 4.07e-94 | 283 |
MS.gene74558.t1 | MTR_4g029170 | 47.950 | 317 | 154 | 4 | 15 | 329 | 14 | 321 | 4.78e-94 | 283 |
MS.gene74558.t1 | MTR_5g083860 | 45.679 | 324 | 163 | 4 | 8 | 329 | 13 | 325 | 5.74e-93 | 281 |
MS.gene74558.t1 | MTR_3g094670 | 47.095 | 327 | 162 | 3 | 1 | 325 | 1 | 318 | 1.67e-92 | 279 |
MS.gene74558.t1 | MTR_7g072480 | 45.897 | 329 | 165 | 3 | 1 | 329 | 1 | 316 | 3.81e-92 | 278 |
MS.gene74558.t1 | MTR_5g049280 | 44.728 | 313 | 168 | 5 | 22 | 330 | 27 | 338 | 6.46e-92 | 278 |
MS.gene74558.t1 | MTR_5g074760 | 45.370 | 324 | 166 | 4 | 11 | 331 | 8 | 323 | 5.61e-91 | 275 |
MS.gene74558.t1 | MTR_5g074740 | 45.342 | 322 | 165 | 4 | 11 | 329 | 8 | 321 | 1.03e-90 | 275 |
MS.gene74558.t1 | MTR_3g094630 | 48.308 | 325 | 154 | 4 | 7 | 329 | 10 | 322 | 1.59e-90 | 274 |
MS.gene74558.t1 | MTR_4g029180 | 48.667 | 300 | 143 | 4 | 32 | 329 | 31 | 321 | 2.65e-90 | 274 |
MS.gene74558.t1 | MTR_4g122640 | 45.875 | 303 | 159 | 3 | 28 | 329 | 38 | 336 | 3.08e-90 | 274 |
MS.gene74558.t1 | MTR_1g115900 | 43.692 | 325 | 170 | 5 | 8 | 330 | 9 | 322 | 6.41e-90 | 273 |
MS.gene74558.t1 | MTR_2g088770 | 44.099 | 322 | 171 | 6 | 11 | 330 | 12 | 326 | 1.05e-89 | 272 |
MS.gene74558.t1 | MTR_4g029190 | 48.208 | 307 | 147 | 5 | 26 | 329 | 43 | 340 | 1.57e-89 | 272 |
MS.gene74558.t1 | MTR_4g046713 | 44.514 | 319 | 173 | 3 | 12 | 329 | 11 | 326 | 3.53e-89 | 271 |
MS.gene74558.t1 | MTR_5g074710 | 47.883 | 307 | 149 | 5 | 26 | 329 | 23 | 321 | 4.21e-89 | 271 |
MS.gene74558.t1 | MTR_5g014100 | 45.752 | 306 | 162 | 2 | 28 | 329 | 26 | 331 | 1.42e-88 | 270 |
MS.gene74558.t1 | MTR_4g074995 | 47.059 | 323 | 143 | 7 | 11 | 329 | 10 | 308 | 1.84e-87 | 266 |
MS.gene74558.t1 | MTR_7g107520 | 43.865 | 326 | 177 | 4 | 4 | 329 | 1 | 320 | 2.10e-87 | 266 |
MS.gene74558.t1 | MTR_3g466180 | 45.741 | 317 | 163 | 2 | 13 | 329 | 16 | 323 | 3.16e-87 | 266 |
MS.gene74558.t1 | MTR_2g008710 | 46.358 | 302 | 151 | 5 | 32 | 329 | 31 | 325 | 4.91e-87 | 265 |
MS.gene74558.t1 | MTR_4g114210 | 43.789 | 322 | 168 | 6 | 13 | 329 | 7 | 320 | 8.77e-87 | 265 |
MS.gene74558.t1 | MTR_2g029880 | 62.500 | 216 | 66 | 4 | 138 | 353 | 7 | 207 | 5.18e-86 | 259 |
MS.gene74558.t1 | MTR_5g074860 | 43.519 | 324 | 172 | 4 | 8 | 328 | 9 | 324 | 5.25e-85 | 260 |
MS.gene74558.t1 | MTR_4g031140 | 41.883 | 308 | 174 | 3 | 28 | 335 | 28 | 330 | 1.15e-83 | 258 |
MS.gene74558.t1 | MTR_3g467600 | 44.136 | 324 | 171 | 3 | 9 | 329 | 8 | 324 | 1.34e-83 | 257 |
MS.gene74558.t1 | MTR_4g074990 | 44.582 | 323 | 148 | 6 | 11 | 329 | 10 | 305 | 5.67e-83 | 254 |
MS.gene74558.t1 | MTR_4g030890 | 42.444 | 311 | 174 | 3 | 23 | 333 | 95 | 400 | 3.36e-82 | 256 |
MS.gene74558.t1 | MTR_3g092990 | 41.250 | 320 | 185 | 2 | 12 | 330 | 10 | 327 | 6.65e-82 | 253 |
MS.gene74558.t1 | MTR_7g026990 | 39.450 | 327 | 188 | 3 | 4 | 330 | 7 | 323 | 7.17e-81 | 249 |
MS.gene74558.t1 | MTR_4g133800 | 43.960 | 298 | 156 | 6 | 33 | 329 | 46 | 333 | 1.31e-80 | 249 |
MS.gene74558.t1 | MTR_7g086820 | 42.295 | 305 | 167 | 5 | 26 | 330 | 18 | 313 | 4.98e-80 | 247 |
MS.gene74558.t1 | MTR_3g072190 | 47.876 | 259 | 126 | 2 | 71 | 329 | 2 | 251 | 7.66e-80 | 244 |
MS.gene74558.t1 | MTR_1g101830 | 42.671 | 307 | 168 | 5 | 24 | 329 | 23 | 322 | 1.04e-78 | 244 |
MS.gene74558.t1 | MTR_2g437770 | 42.997 | 307 | 163 | 6 | 25 | 330 | 47 | 342 | 1.17e-78 | 244 |
MS.gene74558.t1 | MTR_5g022870 | 42.208 | 308 | 168 | 7 | 23 | 329 | 18 | 316 | 1.22e-78 | 244 |
MS.gene74558.t1 | MTR_1g038680 | 42.715 | 302 | 167 | 5 | 32 | 329 | 33 | 332 | 1.77e-78 | 244 |
MS.gene74558.t1 | MTR_6g043240 | 42.813 | 327 | 165 | 8 | 28 | 351 | 42 | 349 | 4.66e-78 | 243 |
MS.gene74558.t1 | MTR_8g075100 | 41.722 | 302 | 168 | 5 | 28 | 329 | 26 | 319 | 6.58e-78 | 242 |
MS.gene74558.t1 | MTR_4g087965 | 42.295 | 305 | 169 | 5 | 27 | 326 | 41 | 343 | 1.17e-77 | 242 |
MS.gene74558.t1 | MTR_1g009750 | 44.300 | 307 | 163 | 5 | 27 | 329 | 26 | 328 | 1.75e-77 | 241 |
MS.gene74558.t1 | MTR_1g086320 | 40.122 | 329 | 187 | 4 | 7 | 329 | 9 | 333 | 1.17e-76 | 239 |
MS.gene74558.t1 | MTR_1g086490 | 41.018 | 334 | 184 | 5 | 7 | 329 | 9 | 340 | 1.44e-76 | 239 |
MS.gene74558.t1 | MTR_4g074980 | 42.500 | 320 | 148 | 7 | 11 | 329 | 10 | 294 | 2.99e-76 | 237 |
MS.gene74558.t1 | MTR_6g043280 | 42.484 | 306 | 162 | 6 | 28 | 331 | 41 | 334 | 4.22e-76 | 238 |
MS.gene74558.t1 | MTR_4g095450 | 43.344 | 323 | 167 | 7 | 8 | 325 | 9 | 320 | 2.14e-75 | 236 |
MS.gene74558.t1 | MTR_7g029030 | 41.667 | 324 | 174 | 5 | 11 | 329 | 7 | 320 | 2.59e-75 | 235 |
MS.gene74558.t1 | MTR_5g016010 | 41.424 | 309 | 174 | 4 | 24 | 328 | 23 | 328 | 3.15e-74 | 233 |
MS.gene74558.t1 | MTR_4g132490 | 39.688 | 320 | 183 | 5 | 15 | 329 | 13 | 327 | 1.05e-73 | 231 |
MS.gene74558.t1 | MTR_4g127670 | 43.564 | 303 | 161 | 5 | 27 | 325 | 23 | 319 | 4.58e-73 | 229 |
MS.gene74558.t1 | MTR_1g025980 | 39.571 | 326 | 189 | 5 | 4 | 329 | 1 | 318 | 6.14e-73 | 229 |
MS.gene74558.t1 | MTR_4g074980 | 46.640 | 253 | 122 | 5 | 11 | 259 | 10 | 253 | 5.65e-72 | 224 |
MS.gene74558.t1 | MTR_1g090760 | 38.838 | 327 | 194 | 4 | 8 | 330 | 7 | 331 | 1.11e-71 | 226 |
MS.gene74558.t1 | MTR_2g008160 | 41.158 | 311 | 171 | 6 | 24 | 329 | 20 | 323 | 1.17e-70 | 223 |
MS.gene74558.t1 | MTR_1g077000 | 39.404 | 302 | 170 | 6 | 28 | 329 | 39 | 327 | 1.29e-70 | 223 |
MS.gene74558.t1 | MTR_6g027440 | 39.564 | 321 | 181 | 7 | 11 | 329 | 5 | 314 | 4.46e-70 | 222 |
MS.gene74558.t1 | MTR_3g092990 | 38.700 | 323 | 183 | 4 | 9 | 330 | 8 | 316 | 2.03e-69 | 220 |
MS.gene74558.t1 | MTR_5g033470 | 39.617 | 313 | 174 | 9 | 26 | 329 | 71 | 377 | 4.29e-69 | 221 |
MS.gene74558.t1 | MTR_7g086870 | 40.584 | 308 | 165 | 7 | 26 | 330 | 20 | 312 | 4.37e-69 | 219 |
MS.gene74558.t1 | MTR_2g008730 | 40.122 | 329 | 161 | 6 | 6 | 329 | 4 | 301 | 6.58e-68 | 216 |
MS.gene74558.t1 | MTR_8g062780 | 37.920 | 327 | 188 | 5 | 7 | 329 | 9 | 324 | 1.78e-67 | 216 |
MS.gene74558.t1 | MTR_6g043460 | 40.333 | 300 | 166 | 6 | 28 | 325 | 36 | 324 | 2.06e-67 | 216 |
MS.gene74558.t1 | MTR_2g099175 | 38.462 | 312 | 174 | 7 | 27 | 330 | 35 | 336 | 1.61e-66 | 213 |
MS.gene74558.t1 | MTR_0155s0040 | 36.667 | 330 | 186 | 7 | 8 | 329 | 1 | 315 | 1.75e-66 | 213 |
MS.gene74558.t1 | MTR_1g009750 | 40.717 | 307 | 157 | 6 | 27 | 329 | 26 | 311 | 2.52e-66 | 212 |
MS.gene74558.t1 | MTR_5g074860 | 37.654 | 324 | 152 | 4 | 8 | 328 | 9 | 285 | 2.71e-64 | 206 |
MS.gene74558.t1 | MTR_3g105790 | 39.604 | 303 | 173 | 4 | 26 | 325 | 23 | 318 | 3.51e-64 | 207 |
MS.gene74558.t1 | MTR_0286s0010 | 38.907 | 311 | 179 | 7 | 24 | 329 | 30 | 334 | 1.33e-63 | 206 |
MS.gene74558.t1 | MTR_6g008075 | 38.907 | 311 | 179 | 7 | 24 | 329 | 30 | 334 | 1.33e-63 | 206 |
MS.gene74558.t1 | MTR_1g066710 | 37.217 | 309 | 183 | 4 | 26 | 331 | 25 | 325 | 3.61e-62 | 202 |
MS.gene74558.t1 | MTR_2g067440 | 35.224 | 335 | 183 | 6 | 26 | 330 | 58 | 388 | 1.34e-60 | 199 |
MS.gene74558.t1 | MTR_2g078610 | 35.758 | 330 | 177 | 7 | 28 | 325 | 76 | 402 | 1.38e-59 | 197 |
MS.gene74558.t1 | MTR_2g077990 | 35.542 | 332 | 179 | 7 | 26 | 325 | 74 | 402 | 3.34e-59 | 196 |
MS.gene74558.t1 | MTR_1g066380 | 36.570 | 309 | 185 | 4 | 26 | 331 | 25 | 325 | 2.12e-58 | 192 |
MS.gene74558.t1 | MTR_4g132110 | 35.873 | 315 | 191 | 4 | 23 | 334 | 27 | 333 | 1.93e-57 | 190 |
MS.gene74558.t1 | MTR_0147s0010 | 34.891 | 321 | 173 | 4 | 28 | 328 | 77 | 381 | 5.11e-57 | 190 |
MS.gene74558.t1 | MTR_1g066640 | 36.570 | 309 | 185 | 4 | 26 | 331 | 25 | 325 | 5.20e-57 | 188 |
MS.gene74558.t1 | MTR_1g066680 | 36.570 | 309 | 184 | 5 | 26 | 331 | 25 | 324 | 4.83e-56 | 186 |
MS.gene74558.t1 | MTR_2g078280 | 35.714 | 322 | 172 | 7 | 26 | 315 | 74 | 392 | 5.28e-56 | 187 |
MS.gene74558.t1 | MTR_4g132110 | 35.938 | 320 | 189 | 6 | 23 | 334 | 27 | 338 | 1.35e-55 | 185 |
MS.gene74558.t1 | MTR_2g067450 | 36.482 | 307 | 185 | 6 | 26 | 328 | 9 | 309 | 1.85e-54 | 181 |
MS.gene74558.t1 | MTR_2g008160 | 36.013 | 311 | 152 | 6 | 24 | 329 | 20 | 288 | 3.83e-54 | 180 |
MS.gene74558.t1 | MTR_3g072210 | 46.073 | 191 | 94 | 3 | 140 | 329 | 56 | 238 | 1.43e-47 | 161 |
MS.gene74558.t1 | MTR_1g066380 | 37.308 | 260 | 152 | 4 | 75 | 331 | 6 | 257 | 1.63e-47 | 162 |
MS.gene74558.t1 | MTR_2g008160 | 47.059 | 170 | 86 | 3 | 24 | 193 | 20 | 185 | 1.49e-46 | 157 |
MS.gene74558.t1 | MTR_5g074700 | 40.343 | 233 | 114 | 5 | 101 | 330 | 5 | 215 | 5.36e-46 | 156 |
MS.gene74558.t1 | MTR_3g105790 | 39.496 | 238 | 138 | 3 | 91 | 325 | 8 | 242 | 1.82e-45 | 156 |
MS.gene74558.t1 | MTR_7g072490 | 38.400 | 250 | 91 | 4 | 73 | 322 | 1 | 187 | 7.61e-43 | 148 |
MS.gene74558.t1 | MTR_3g072260 | 50.781 | 128 | 59 | 1 | 13 | 136 | 7 | 134 | 6.10e-36 | 127 |
MS.gene74558.t1 | MTR_2g029930 | 56.522 | 115 | 22 | 3 | 11 | 111 | 2 | 102 | 2.55e-32 | 117 |
MS.gene74558.t1 | MTR_5g058120 | 40.491 | 163 | 84 | 3 | 163 | 325 | 6 | 155 | 2.34e-29 | 114 |
MS.gene74558.t1 | MTR_2g077980 | 30.605 | 281 | 150 | 11 | 90 | 330 | 11 | 286 | 2.50e-27 | 109 |
MS.gene74558.t1 | MTR_2g078560 | 30.531 | 226 | 124 | 5 | 134 | 328 | 96 | 319 | 4.52e-27 | 109 |
MS.gene74558.t1 | MTR_3g462850 | 40.559 | 143 | 80 | 5 | 192 | 330 | 9 | 150 | 5.73e-25 | 99.4 |
MS.gene74558.t1 | MTR_7g086790 | 32.812 | 192 | 107 | 4 | 75 | 266 | 17 | 186 | 1.11e-23 | 97.1 |
MS.gene74558.t1 | MTR_1g098320 | 43.750 | 96 | 52 | 1 | 250 | 345 | 47 | 140 | 3.65e-19 | 83.2 |
MS.gene74558.t1 | MTR_1g089005 | 36.923 | 130 | 75 | 2 | 14 | 137 | 1 | 129 | 6.43e-19 | 83.2 |
MS.gene74558.t1 | MTR_6g048160 | 56.338 | 71 | 27 | 2 | 67 | 137 | 22 | 88 | 1.65e-18 | 79.7 |
MS.gene74558.t1 | MTR_4g114220 | 48.718 | 78 | 30 | 2 | 55 | 132 | 30 | 97 | 1.72e-16 | 75.9 |
MS.gene74558.t1 | MTR_5g074770 | 42.529 | 87 | 49 | 1 | 242 | 328 | 23 | 108 | 1.36e-15 | 72.4 |
MS.gene74558.t1 | MTR_7g107500 | 41.414 | 99 | 54 | 3 | 231 | 329 | 3 | 97 | 4.39e-14 | 67.8 |
MS.gene74558.t1 | MTR_4g012865 | 45.588 | 68 | 37 | 0 | 28 | 95 | 77 | 144 | 7.53e-14 | 68.9 |
MS.gene74558.t1 | MTR_3g088160 | 26.236 | 263 | 156 | 8 | 62 | 313 | 121 | 356 | 1.30e-13 | 71.6 |
MS.gene74558.t1 | MTR_3g088160 | 26.236 | 263 | 156 | 8 | 62 | 313 | 121 | 356 | 1.80e-13 | 71.6 |
MS.gene74558.t1 | MTR_7g086810 | 31.405 | 121 | 57 | 1 | 26 | 146 | 4 | 98 | 1.21e-12 | 67.4 |
MS.gene74558.t1 | MTR_4g031040 | 28.000 | 175 | 82 | 3 | 87 | 261 | 1 | 131 | 3.01e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74558.t1 | AT5G06730 | 54.755 | 347 | 153 | 1 | 8 | 354 | 13 | 355 | 2.49e-133 | 385 |
MS.gene74558.t1 | AT5G06720 | 56.832 | 322 | 139 | 0 | 8 | 329 | 12 | 333 | 9.65e-132 | 380 |
MS.gene74558.t1 | AT2G38380 | 56.287 | 334 | 135 | 3 | 23 | 355 | 26 | 349 | 4.74e-131 | 379 |
MS.gene74558.t1 | AT2G38390 | 54.790 | 334 | 140 | 3 | 23 | 355 | 26 | 349 | 1.76e-128 | 372 |
MS.gene74558.t1 | AT3G32980 | 54.545 | 352 | 155 | 3 | 1 | 347 | 1 | 352 | 3.01e-127 | 369 |
MS.gene74558.t1 | AT3G49120 | 55.000 | 340 | 148 | 3 | 13 | 347 | 14 | 353 | 1.58e-126 | 367 |
MS.gene74558.t1 | AT3G49110 | 54.942 | 344 | 148 | 4 | 9 | 347 | 13 | 354 | 5.02e-125 | 363 |
MS.gene74558.t1 | AT4G08770 | 55.000 | 320 | 142 | 2 | 24 | 341 | 20 | 339 | 2.17e-123 | 359 |
MS.gene74558.t1 | AT4G08780 | 54.375 | 320 | 144 | 2 | 24 | 341 | 20 | 339 | 7.82e-122 | 355 |
MS.gene74558.t1 | AT5G19880 | 50.152 | 329 | 159 | 3 | 4 | 329 | 3 | 329 | 6.29e-112 | 329 |
MS.gene74558.t1 | AT2G18140 | 51.987 | 302 | 144 | 1 | 28 | 329 | 35 | 335 | 3.24e-109 | 323 |
MS.gene74558.t1 | AT5G66390 | 49.675 | 308 | 154 | 1 | 22 | 329 | 27 | 333 | 1.72e-107 | 318 |
MS.gene74558.t1 | AT2G18150 | 50.329 | 304 | 150 | 1 | 26 | 329 | 34 | 336 | 2.22e-106 | 315 |
MS.gene74558.t1 | AT4G36430 | 50.000 | 308 | 153 | 1 | 23 | 330 | 25 | 331 | 1.41e-105 | 313 |
MS.gene74558.t1 | AT5G19890 | 52.941 | 306 | 136 | 4 | 26 | 329 | 28 | 327 | 1.26e-104 | 310 |
MS.gene74558.t1 | AT3G50990 | 49.191 | 309 | 156 | 1 | 23 | 331 | 36 | 343 | 2.88e-103 | 308 |
MS.gene74558.t1 | AT1G44970 | 49.342 | 304 | 154 | 0 | 26 | 329 | 43 | 346 | 4.88e-101 | 302 |
MS.gene74558.t1 | AT1G14550 | 50.327 | 306 | 142 | 5 | 26 | 329 | 24 | 321 | 7.44e-99 | 296 |
MS.gene74558.t1 | AT1G14540 | 49.845 | 323 | 153 | 5 | 8 | 329 | 1 | 315 | 3.17e-97 | 291 |
MS.gene74558.t1 | AT5G05340 | 47.883 | 307 | 149 | 3 | 25 | 329 | 27 | 324 | 3.61e-96 | 289 |
MS.gene74558.t1 | AT1G68850 | 46.474 | 312 | 161 | 5 | 24 | 330 | 26 | 336 | 1.52e-94 | 285 |
MS.gene74558.t1 | AT1G49570 | 47.213 | 305 | 156 | 3 | 26 | 327 | 46 | 348 | 1.73e-93 | 283 |
MS.gene74558.t1 | AT4G16270 | 47.315 | 298 | 154 | 2 | 32 | 329 | 54 | 348 | 2.05e-92 | 280 |
MS.gene74558.t1 | AT5G58390 | 46.154 | 325 | 163 | 5 | 8 | 329 | 1 | 316 | 2.85e-91 | 276 |
MS.gene74558.t1 | AT2G35380 | 48.675 | 302 | 151 | 3 | 32 | 329 | 34 | 335 | 6.13e-91 | 276 |
MS.gene74558.t1 | AT4G11290 | 41.745 | 321 | 183 | 3 | 11 | 329 | 8 | 326 | 1.00e-87 | 267 |
MS.gene74558.t1 | AT5G58400 | 44.753 | 324 | 165 | 5 | 9 | 329 | 13 | 325 | 1.39e-86 | 265 |
MS.gene74558.t1 | AT2G41480 | 43.827 | 324 | 169 | 6 | 11 | 329 | 13 | 328 | 4.34e-86 | 263 |
MS.gene74558.t1 | AT3G03670 | 43.082 | 318 | 177 | 3 | 12 | 329 | 8 | 321 | 7.77e-86 | 262 |
MS.gene74558.t1 | AT3G21770 | 42.405 | 316 | 176 | 4 | 17 | 330 | 18 | 329 | 3.18e-85 | 261 |
MS.gene74558.t1 | AT1G71695 | 44.713 | 331 | 161 | 7 | 28 | 355 | 44 | 355 | 1.09e-84 | 261 |
MS.gene74558.t1 | AT1G05260 | 41.265 | 332 | 187 | 6 | 1 | 330 | 1 | 326 | 8.33e-84 | 257 |
MS.gene74558.t1 | AT5G15180 | 41.141 | 333 | 188 | 6 | 1 | 329 | 1 | 329 | 1.12e-83 | 257 |
MS.gene74558.t1 | AT5G64120 | 45.151 | 299 | 154 | 6 | 32 | 329 | 39 | 328 | 3.41e-82 | 253 |
MS.gene74558.t1 | AT2G22420 | 40.060 | 332 | 188 | 4 | 8 | 339 | 9 | 329 | 3.79e-82 | 253 |
MS.gene74558.t1 | AT2G18980 | 43.939 | 330 | 168 | 6 | 6 | 329 | 5 | 323 | 6.94e-82 | 252 |
MS.gene74558.t1 | AT4G30170 | 43.831 | 308 | 162 | 4 | 26 | 329 | 25 | 325 | 2.79e-81 | 251 |
MS.gene74558.t1 | AT4G25980 | 43.689 | 309 | 163 | 5 | 26 | 329 | 24 | 326 | 5.95e-81 | 250 |
MS.gene74558.t1 | AT3G01190 | 43.046 | 302 | 166 | 5 | 28 | 329 | 26 | 321 | 3.35e-80 | 248 |
MS.gene74558.t1 | AT5G14130 | 42.593 | 324 | 175 | 6 | 12 | 329 | 12 | 330 | 1.69e-79 | 246 |
MS.gene74558.t1 | AT5G67400 | 42.724 | 323 | 178 | 4 | 11 | 329 | 10 | 329 | 2.61e-79 | 246 |
MS.gene74558.t1 | AT5G14130 | 42.593 | 324 | 175 | 6 | 12 | 329 | 53 | 371 | 3.82e-79 | 247 |
MS.gene74558.t1 | AT5G17820 | 41.824 | 318 | 170 | 8 | 13 | 329 | 10 | 313 | 1.23e-78 | 244 |
MS.gene74558.t1 | AT4G37530 | 43.226 | 310 | 169 | 4 | 24 | 329 | 23 | 329 | 5.44e-78 | 243 |
MS.gene74558.t1 | AT1G05240 | 43.092 | 304 | 159 | 5 | 32 | 329 | 30 | 325 | 6.25e-78 | 242 |
MS.gene74558.t1 | AT1G05250 | 43.092 | 304 | 159 | 5 | 32 | 329 | 30 | 325 | 6.25e-78 | 242 |
MS.gene74558.t1 | AT5G51890 | 41.694 | 307 | 172 | 5 | 24 | 329 | 22 | 322 | 6.42e-78 | 242 |
MS.gene74558.t1 | AT3G49960 | 42.368 | 321 | 178 | 4 | 13 | 329 | 12 | 329 | 8.57e-78 | 242 |
MS.gene74558.t1 | AT5G17820 | 41.824 | 318 | 170 | 8 | 13 | 329 | 63 | 366 | 1.24e-77 | 243 |
MS.gene74558.t1 | AT5G39580 | 44.482 | 299 | 157 | 6 | 32 | 329 | 29 | 319 | 7.59e-76 | 237 |
MS.gene74558.t1 | AT4G33420 | 40.752 | 319 | 175 | 7 | 11 | 329 | 21 | 325 | 6.09e-75 | 234 |
MS.gene74558.t1 | AT4G33420 | 40.752 | 319 | 175 | 7 | 11 | 329 | 68 | 372 | 2.85e-74 | 234 |
MS.gene74558.t1 | AT5G42180 | 39.394 | 330 | 184 | 8 | 1 | 328 | 1 | 316 | 7.10e-73 | 229 |
MS.gene74558.t1 | AT5G64110 | 44.040 | 302 | 156 | 7 | 32 | 329 | 38 | 330 | 1.22e-71 | 226 |
MS.gene74558.t1 | AT4G37520 | 40.584 | 308 | 176 | 4 | 26 | 329 | 25 | 329 | 1.40e-71 | 226 |
MS.gene74558.t1 | AT2G34060 | 40.523 | 306 | 173 | 6 | 27 | 326 | 41 | 343 | 1.49e-71 | 226 |
MS.gene74558.t1 | AT5G40150 | 39.873 | 316 | 173 | 5 | 20 | 329 | 24 | 328 | 8.29e-71 | 224 |
MS.gene74558.t1 | AT4G37520 | 40.260 | 308 | 174 | 5 | 26 | 329 | 25 | 326 | 3.94e-70 | 222 |
MS.gene74558.t1 | AT2G39040 | 41.667 | 312 | 171 | 6 | 25 | 329 | 43 | 350 | 4.05e-70 | 223 |
MS.gene74558.t1 | AT3G28200 | 38.019 | 313 | 176 | 5 | 23 | 329 | 16 | 316 | 4.15e-69 | 219 |
MS.gene74558.t1 | AT4G31760 | 38.750 | 320 | 185 | 5 | 13 | 329 | 15 | 326 | 6.01e-69 | 219 |
MS.gene74558.t1 | AT5G64100 | 41.196 | 301 | 164 | 7 | 32 | 329 | 41 | 331 | 1.41e-68 | 218 |
MS.gene74558.t1 | AT1G77100 | 40.248 | 323 | 178 | 7 | 11 | 329 | 8 | 319 | 1.45e-68 | 218 |
MS.gene74558.t1 | AT5G24070 | 40.260 | 308 | 165 | 7 | 34 | 333 | 43 | 339 | 2.48e-68 | 218 |
MS.gene74558.t1 | AT2G24800 | 39.935 | 308 | 174 | 5 | 26 | 329 | 29 | 329 | 2.81e-68 | 218 |
MS.gene74558.t1 | AT4G26010 | 40.909 | 308 | 160 | 8 | 26 | 329 | 20 | 309 | 2.81e-68 | 217 |
MS.gene74558.t1 | AT4G26010 | 40.909 | 308 | 160 | 8 | 26 | 329 | 48 | 337 | 3.34e-68 | 218 |
MS.gene74558.t1 | AT4G37530 | 45.349 | 258 | 136 | 3 | 24 | 277 | 23 | 279 | 9.62e-68 | 214 |
MS.gene74558.t1 | AT1G24110 | 38.438 | 320 | 188 | 6 | 14 | 329 | 8 | 322 | 1.10e-67 | 216 |
MS.gene74558.t1 | AT4G33870 | 35.030 | 334 | 171 | 6 | 32 | 326 | 72 | 398 | 1.32e-67 | 218 |
MS.gene74558.t1 | AT2G43480 | 40.728 | 302 | 160 | 7 | 36 | 329 | 45 | 335 | 1.05e-66 | 214 |
MS.gene74558.t1 | AT1G30870 | 38.608 | 316 | 177 | 7 | 22 | 332 | 45 | 348 | 1.73e-66 | 214 |
MS.gene74558.t1 | AT2G35380 | 47.368 | 247 | 126 | 3 | 87 | 329 | 1 | 247 | 1.76e-66 | 210 |
MS.gene74558.t1 | AT4G17690 | 38.889 | 306 | 176 | 5 | 28 | 330 | 26 | 323 | 1.04e-65 | 211 |
MS.gene74558.t1 | AT5G47000 | 37.662 | 308 | 182 | 5 | 26 | 330 | 31 | 331 | 1.19e-63 | 206 |
MS.gene74558.t1 | AT5G22410 | 36.000 | 325 | 186 | 10 | 12 | 326 | 10 | 322 | 3.51e-60 | 197 |
MS.gene74558.t1 | AT1G34510 | 38.361 | 305 | 172 | 6 | 26 | 329 | 20 | 309 | 6.14e-60 | 196 |
MS.gene74558.t1 | AT4G21960 | 36.964 | 303 | 180 | 4 | 32 | 331 | 35 | 329 | 5.02e-59 | 194 |
MS.gene74558.t1 | AT3G17070 | 36.578 | 339 | 196 | 8 | 2 | 329 | 9 | 339 | 8.25e-58 | 191 |
MS.gene74558.t1 | AT2G37130 | 34.951 | 309 | 189 | 5 | 25 | 329 | 27 | 327 | 1.14e-53 | 180 |
MS.gene74558.t1 | AT2G37130 | 35.430 | 302 | 183 | 5 | 32 | 329 | 3 | 296 | 1.79e-53 | 178 |
MS.gene74558.t1 | AT4G25980 | 43.318 | 217 | 114 | 4 | 24 | 235 | 67 | 279 | 5.97e-51 | 171 |
MS.gene74558.t1 | AT3G17070 | 36.567 | 268 | 153 | 8 | 70 | 329 | 18 | 276 | 1.92e-42 | 149 |
MS.gene74558.t1 | AT5G39580 | 47.368 | 171 | 85 | 3 | 32 | 202 | 29 | 194 | 1.89e-40 | 142 |
MS.gene74558.t1 | AT2G24800 | 41.279 | 172 | 97 | 1 | 26 | 197 | 29 | 196 | 3.05e-37 | 134 |
MS.gene74558.t1 | AT4G08390 | 26.415 | 265 | 153 | 10 | 62 | 313 | 127 | 362 | 1.78e-14 | 74.3 |
MS.gene74558.t1 | AT4G08390 | 26.415 | 265 | 153 | 10 | 62 | 313 | 127 | 362 | 1.78e-14 | 74.3 |
MS.gene74558.t1 | AT4G08390 | 26.415 | 265 | 153 | 10 | 62 | 313 | 127 | 362 | 1.78e-14 | 74.3 |
MS.gene74558.t1 | AT4G08390 | 26.415 | 265 | 153 | 10 | 62 | 313 | 126 | 361 | 1.81e-14 | 74.3 |
MS.gene74558.t1 | AT3G09640 | 26.293 | 232 | 123 | 8 | 85 | 312 | 59 | 246 | 6.12e-14 | 71.2 |
MS.gene74558.t1 | AT3G09640 | 26.293 | 232 | 123 | 8 | 85 | 312 | 59 | 246 | 6.12e-14 | 71.2 |
MS.gene74558.t1 | AT1G77490 | 26.336 | 262 | 155 | 8 | 62 | 312 | 106 | 340 | 1.07e-13 | 72.0 |
MS.gene74558.t1 | AT1G77490 | 26.236 | 263 | 156 | 8 | 62 | 313 | 106 | 341 | 1.46e-13 | 71.6 |
MS.gene74558.t1 | AT3G42570 | 32.673 | 101 | 67 | 1 | 96 | 195 | 49 | 149 | 3.59e-12 | 63.9 |
Find 64 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTAAAGAGTTGTTATT+TGG | 0.128513 | 2.3:+59817888 | None:intergenic |
CTCCAATCTTCAAGTGAAAA+AGG | 0.146920 | 2.3:-59817175 | MS.gene74558:CDS |
TGCTTTCTTTGAGAGCTTTA+AGG | 0.158383 | 2.3:-59817067 | MS.gene74558:CDS |
TAAGGCTGCAATGATTAAAA+TGG | 0.175071 | 2.3:-59817049 | MS.gene74558:CDS |
GGCAATATTGGTGTGCTAAC+AGG | 0.250866 | 2.3:-59817027 | MS.gene74558:CDS |
CAAGAGTTGTTCTCAACTTC+TGG | 0.284519 | 2.3:-59817135 | MS.gene74558:CDS |
TAACAACTCTTTAAGAGGTT+TGG | 0.292546 | 2.3:-59817883 | MS.gene74558:CDS |
CCAAATAACAACTCTTTAAG+AGG | 0.326990 | 2.3:-59817888 | MS.gene74558:CDS |
TCCGGCTCCATTCAATTCCT+TGG | 0.334088 | 2.3:-59817551 | MS.gene74558:CDS |
ATTTCAGGTGCTCATACATT+TGG | 0.340486 | 2.3:-59817381 | MS.gene74558:intron |
TAGTTCTTGTCAAATTTATC+AGG | 0.341189 | 2.3:+59817201 | None:intergenic |
AGGAGTCGTTGGATCGAAAT+TGG | 0.358608 | 2.3:+59817221 | None:intergenic |
TGCTCAAGCATCCTCTGTTC+TGG | 0.373097 | 2.3:-59817781 | MS.gene74558:intron |
ATGATTAAAATGGGCAATAT+TGG | 0.376995 | 2.3:-59817039 | MS.gene74558:CDS |
ATCCTCTAATGATTCTACTA+TGG | 0.377320 | 2.3:+59816927 | None:intergenic |
CCTAGTTGGACAGTTCCTTT+AGG | 0.383887 | 2.3:-59817622 | MS.gene74558:CDS |
ATCCATAGTAGAATCATTAG+AGG | 0.411122 | 2.3:-59816929 | MS.gene74558:CDS |
AAGTTGTGCATCTGAGGAAA+AGG | 0.427974 | 2.3:+59819009 | None:intergenic |
AGTTGATCCAAGGAATTGAA+TGG | 0.434442 | 2.3:+59817544 | None:intergenic |
TTGTACAACTTCAGCAGTAC+TGG | 0.437790 | 2.3:-59817327 | MS.gene74558:CDS |
GAATTTGTTGACAATGCTAA+TGG | 0.451627 | 2.3:+59817104 | None:intergenic |
AAGGCTGCAATGATTAAAAT+GGG | 0.452725 | 2.3:-59817048 | MS.gene74558:CDS |
GGACAGTTCCTTTAGGAAGA+AGG | 0.457817 | 2.3:-59817615 | MS.gene74558:CDS |
TACTGATCTAGTTGCACTCT+CGG | 0.464956 | 2.3:-59817488 | MS.gene74558:CDS |
AGAACAACTCTTGATCACTT+TGG | 0.468970 | 2.3:+59817145 | None:intergenic |
TCAGCACAAGAAACTGTGTT+AGG | 0.474603 | 2.3:+59817819 | None:intergenic |
AAACCATCCCTTCTTCCTAA+AGG | 0.477418 | 2.3:+59817607 | None:intergenic |
AAGTAAGTTGTGTTAAGAGT+TGG | 0.480928 | 2.3:+59817294 | None:intergenic |
GCATGCTTGCTAGTCTCGTC+AGG | 0.492600 | 2.3:-59818901 | MS.gene74558:CDS |
TTTGTGCCAGGTCCACCATT+GGG | 0.501871 | 2.3:+59817249 | None:intergenic |
ACTTGCAAATCAAAATCTTC+CGG | 0.502470 | 2.3:-59817569 | MS.gene74558:CDS |
GGTGTGCTAACAGGGACAAA+AGG | 0.508960 | 2.3:-59817018 | MS.gene74558:CDS |
AGTTGTGTTAAGAGTTGGAT+CGG | 0.517053 | 2.3:+59817299 | None:intergenic |
TCAAATTTATCAGGAGTCGT+TGG | 0.517441 | 2.3:+59817210 | None:intergenic |
TCCAAGGAATTGAATGGAGC+CGG | 0.518137 | 2.3:+59817550 | None:intergenic |
TACAGGCACAAGGTCCTAGT+TGG | 0.519137 | 2.3:-59817636 | MS.gene74558:intron |
GACAGTTCCTTTAGGAAGAA+GGG | 0.519926 | 2.3:-59817614 | MS.gene74558:CDS |
GTTTGTGCCAGGTCCACCAT+TGG | 0.522110 | 2.3:+59817248 | None:intergenic |
GCAATATTGGTGTGCTAACA+GGG | 0.525835 | 2.3:-59817026 | MS.gene74558:CDS |
CCTAAAGGAACTGTCCAACT+AGG | 0.526146 | 2.3:+59817622 | None:intergenic |
TGATTCTACTATGGATGCTA+TGG | 0.530449 | 2.3:+59816936 | None:intergenic |
AAAGCTGCATTTGCTGCTCA+AGG | 0.531000 | 2.3:-59817520 | MS.gene74558:CDS |
ATATGTCCCAATGGTGGACC+TGG | 0.533119 | 2.3:-59817255 | MS.gene74558:CDS |
AGTTGTGCATCTGAGGAAAA+GGG | 0.541172 | 2.3:+59819010 | None:intergenic |
TCGTTGGATCGAAATTGGTA+AGG | 0.541757 | 2.3:+59817226 | None:intergenic |
TGTTAAGACATTGCTAACAA+TGG | 0.542625 | 2.3:+59818946 | None:intergenic |
TGCAGCTTTAAGTTGATCCA+AGG | 0.550246 | 2.3:+59817534 | None:intergenic |
GTTGTGTTAAGAGTTGGATC+GGG | 0.555195 | 2.3:+59817300 | None:intergenic |
ACTGATCTAGTTGCACTCTC+GGG | 0.568310 | 2.3:-59817487 | MS.gene74558:intron |
CTAACAATGGAACTAACAGT+TGG | 0.570134 | 2.3:+59818959 | None:intergenic |
CAACTAGATCAGTAGTATTG+AGG | 0.571363 | 2.3:+59817497 | None:intergenic |
GGGACTAAGTTGTGCATCTG+AGG | 0.581590 | 2.3:+59819003 | None:intergenic |
TTCTACTATGGATGCTATGG+TGG | 0.582608 | 2.3:+59816939 | None:intergenic |
AAATTGGTAAGGTTTGTGCC+AGG | 0.593226 | 2.3:+59817237 | None:intergenic |
GTTCCTTTAGGAAGAAGGGA+TGG | 0.594643 | 2.3:-59817610 | MS.gene74558:CDS |
CGCACAATATGTCCCAATGG+TGG | 0.595195 | 2.3:-59817261 | MS.gene74558:CDS |
ACACCACATAGAAGTTGCTA+AGG | 0.602167 | 2.3:+59819063 | None:intergenic |
ATAGTAGAATCATTAGAGGA+TGG | 0.616700 | 2.3:-59816925 | MS.gene74558:CDS |
CTGCGCACAATATGTCCCAA+TGG | 0.617077 | 2.3:-59817264 | MS.gene74558:CDS |
ACTCCTTAGCAACTTCTATG+TGG | 0.626841 | 2.3:-59819066 | MS.gene74558:CDS |
ACGAGACTAGCAAGCATGCG+AGG | 0.661835 | 2.3:+59818905 | None:intergenic |
AGTATTGTTCAGCAAAACTG+AGG | 0.702311 | 2.3:+59817941 | None:intergenic |
TAGGGCATATACCAGAACAG+AGG | 0.720428 | 2.3:+59817770 | None:intergenic |
GATGAAATAATACAGGCACA+AGG | 0.736966 | 2.3:-59817646 | MS.gene74558:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATGATATATGTGAT+AGG | - | chr2.3:59817483-59817502 | MS.gene74558:intron | 15.0% |
!!! | ACAGAAATATATTTAGAATT+AGG | + | chr2.3:59818228-59818247 | None:intergenic | 15.0% |
!!! | CAAATAGTAAAGTTTAAAAT+TGG | - | chr2.3:59817219-59817238 | MS.gene74558:CDS | 15.0% |
!!! | CAGAAATATATTTAGAATTA+GGG | + | chr2.3:59818227-59818246 | None:intergenic | 15.0% |
!!! | TATATATTTTTCTCAATTTC+AGG | - | chr2.3:59818580-59818599 | MS.gene74558:intron | 15.0% |
!!! | TTTTTAGTTGTATGATATAT+AGG | + | chr2.3:59817259-59817278 | None:intergenic | 15.0% |
!! | ATTGCTTGGAAAAAAAAAAT+TGG | - | chr2.3:59817589-59817608 | MS.gene74558:CDS | 20.0% |
!! | TAATTTAATACAACATCACA+AGG | - | chr2.3:59818247-59818266 | MS.gene74558:intron | 20.0% |
!! | TAGTATTGTCAAAAAATTGA+AGG | - | chr2.3:59817672-59817691 | MS.gene74558:intron | 20.0% |
!! | TTGCTTGGAAAAAAAAAATT+GGG | - | chr2.3:59817590-59817609 | MS.gene74558:CDS | 20.0% |
!!! | ATATGAATATGAAAGTGTAA+CGG | - | chr2.3:59817827-59817846 | MS.gene74558:CDS | 20.0% |
!!! | TCTCTTTTTCTAAAAATAGA+AGG | - | chr2.3:59817389-59817408 | MS.gene74558:intron | 20.0% |
!!! | TTTTTTTTACTGAACTAGTT+AGG | - | chr2.3:59817729-59817748 | MS.gene74558:intron | 20.0% |
! | ATGATTAAAATGGGCAATAT+TGG | - | chr2.3:59818937-59818956 | MS.gene74558:CDS | 25.0% |
! | CTAAAGAGAGAAGAAATAAA+TGG | - | chr2.3:59817460-59817479 | MS.gene74558:intron | 25.0% |
! | GAAGTACAAATATAATTGCT+TGG | - | chr2.3:59817575-59817594 | MS.gene74558:CDS | 25.0% |
! | GTTTGATAAAAAGACAAGTA+AGG | + | chr2.3:59817356-59817375 | None:intergenic | 25.0% |
! | TACCTATGATGAAATAATAC+AGG | - | chr2.3:59818323-59818342 | MS.gene74558:intron | 25.0% |
! | TAGTTCTTGTCAAATTTATC+AGG | + | chr2.3:59818778-59818797 | None:intergenic | 25.0% |
! | TCCACTGTTAAGTTTAAAAA+CGG | + | chr2.3:59817878-59817897 | None:intergenic | 25.0% |
! | TGATAGGTTGTTGAATTAAT+AGG | - | chr2.3:59817499-59817518 | MS.gene74558:CDS | 25.0% |
!! | ATGTGATCTATAATTTTCAC+AGG | - | chr2.3:59818003-59818022 | MS.gene74558:intron | 25.0% |
!! | TATGAATATGAAAGTGTAAC+GGG | - | chr2.3:59817828-59817847 | MS.gene74558:CDS | 25.0% |
!! | TGTGATCTATAATTTTCACA+GGG | - | chr2.3:59818004-59818023 | MS.gene74558:intron | 25.0% |
!! | TTTATTTCTTCTCTCTTTAG+TGG | + | chr2.3:59817460-59817479 | None:intergenic | 25.0% |
!!! | GTTAGCAGTAAGTTTTAAAT+AGG | - | chr2.3:59817923-59817942 | MS.gene74558:CDS | 25.0% |
AAGGCTGCAATGATTAAAAT+GGG | - | chr2.3:59818928-59818947 | MS.gene74558:CDS | 30.0% | |
AAGTAAGTTGTGTTAAGAGT+TGG | + | chr2.3:59818685-59818704 | None:intergenic | 30.0% | |
ACGCATGAATTAAAGAACAT+AGG | + | chr2.3:59817974-59817993 | None:intergenic | 30.0% | |
ACTTGCAAATCAAAATCTTC+CGG | - | chr2.3:59818407-59818426 | MS.gene74558:intron | 30.0% | |
ATAGTAGAATCATTAGAGGA+TGG | - | chr2.3:59819051-59819070 | MS.gene74558:CDS | 30.0% | |
ATCCATAGTAGAATCATTAG+AGG | - | chr2.3:59819047-59819066 | MS.gene74558:CDS | 30.0% | |
ATCCTCTAATGATTCTACTA+TGG | + | chr2.3:59819052-59819071 | None:intergenic | 30.0% | |
CCAAATAACAACTCTTTAAG+AGG | - | chr2.3:59818088-59818107 | MS.gene74558:intron | 30.0% | |
CGCATGAATTAAAGAACATA+GGG | + | chr2.3:59817973-59817992 | None:intergenic | 30.0% | |
TAAGGCTGCAATGATTAAAA+TGG | - | chr2.3:59818927-59818946 | MS.gene74558:CDS | 30.0% | |
TCCAATCTTCAAGTGAAAAA+GGG | - | chr2.3:59818802-59818821 | MS.gene74558:intron | 30.0% | |
TCTTAAACACCTAAAACCAT+TGG | - | chr2.3:59817433-59817452 | MS.gene74558:intron | 30.0% | |
TGCCTGTATTATTTCATCAT+AGG | + | chr2.3:59818328-59818347 | None:intergenic | 30.0% | |
TGTTAAGACATTGCTAACAA+TGG | + | chr2.3:59817033-59817052 | None:intergenic | 30.0% | |
TTAGTACCCTTGTATTCTAT+AGG | - | chr2.3:59817851-59817870 | MS.gene74558:CDS | 30.0% | |
TTCGAAAAGACAATTTACAC+AGG | + | chr2.3:59817794-59817813 | None:intergenic | 30.0% | |
! | AGAAAGTTGATTCATACACT+TGG | + | chr2.3:59817698-59817717 | None:intergenic | 30.0% |
! | CCTCTTAAAGAGTTGTTATT+TGG | + | chr2.3:59818091-59818110 | None:intergenic | 30.0% |
! | TAACAACTCTTTAAGAGGTT+TGG | - | chr2.3:59818093-59818112 | MS.gene74558:intron | 30.0% |
!! | ACAAGTTTTGCTGTAAAAAG+TGG | + | chr2.3:59816997-59817016 | None:intergenic | 30.0% |
!! | ACCGTTTTTAAACTTAACAG+TGG | - | chr2.3:59817874-59817893 | MS.gene74558:CDS | 30.0% |
!! | CAAGTTTTGCTGTAAAAAGT+GGG | + | chr2.3:59816996-59817015 | None:intergenic | 30.0% |
!! | GAATTTGTTGACAATGCTAA+TGG | + | chr2.3:59818875-59818894 | None:intergenic | 30.0% |
!!! | CTCAAAGAAAGCATTTTGAT+CGG | + | chr2.3:59818902-59818921 | None:intergenic | 30.0% |
!!! | CTTTCATGACTGTTTTGTTT+TGG | - | chr2.3:59817103-59817122 | MS.gene74558:CDS | 30.0% |
!!! | GATTTTGATTTGCAAGTGTT+CGG | + | chr2.3:59818404-59818423 | None:intergenic | 30.0% |
AAACGGTCCTATAGAATACA+AGG | + | chr2.3:59817861-59817880 | None:intergenic | 35.0% | |
AACGGTCCTATAGAATACAA+GGG | + | chr2.3:59817860-59817879 | None:intergenic | 35.0% | |
AGAACAACTCTTGATCACTT+TGG | + | chr2.3:59818834-59818853 | None:intergenic | 35.0% | |
AGTATTGTTCAGCAAAACTG+AGG | + | chr2.3:59818038-59818057 | None:intergenic | 35.0% | |
AGTTGATCCAAGGAATTGAA+TGG | + | chr2.3:59818435-59818454 | None:intergenic | 35.0% | |
AGTTGTGTTAAGAGTTGGAT+CGG | + | chr2.3:59818680-59818699 | None:intergenic | 35.0% | |
CAACTAGATCAGTAGTATTG+AGG | + | chr2.3:59818482-59818501 | None:intergenic | 35.0% | |
CTAACAATGGAACTAACAGT+TGG | + | chr2.3:59817020-59817039 | None:intergenic | 35.0% | |
CTCCAATCTTCAAGTGAAAA+AGG | - | chr2.3:59818801-59818820 | MS.gene74558:intron | 35.0% | |
GATGAAATAATACAGGCACA+AGG | - | chr2.3:59818330-59818349 | MS.gene74558:intron | 35.0% | |
TCAAATTTATCAGGAGTCGT+TGG | + | chr2.3:59818769-59818788 | None:intergenic | 35.0% | |
TCTTTGAATACAGCATCACA+AGG | - | chr2.3:59818282-59818301 | MS.gene74558:intron | 35.0% | |
TGATTCTACTATGGATGCTA+TGG | + | chr2.3:59819043-59819062 | None:intergenic | 35.0% | |
! | ATTTCAGGTGCTCATACATT+TGG | - | chr2.3:59818595-59818614 | MS.gene74558:intron | 35.0% |
! | TGCTTTCTTTGAGAGCTTTA+AGG | - | chr2.3:59818909-59818928 | MS.gene74558:CDS | 35.0% |
! | TTTAGTGGTCCAATGGTTTT+AGG | + | chr2.3:59817445-59817464 | None:intergenic | 35.0% |
!! | ACCCTTTTTCACTTGAAGAT+TGG | + | chr2.3:59818806-59818825 | None:intergenic | 35.0% |
AAACCATCCCTTCTTCCTAA+AGG | + | chr2.3:59818372-59818391 | None:intergenic | 40.0% | |
AAATTGGTAAGGTTTGTGCC+AGG | + | chr2.3:59818742-59818761 | None:intergenic | 40.0% | |
AAGTTGTGCATCTGAGGAAA+AGG | + | chr2.3:59816970-59816989 | None:intergenic | 40.0% | |
ACACCACATAGAAGTTGCTA+AGG | + | chr2.3:59816916-59816935 | None:intergenic | 40.0% | |
ACTCCTTAGCAACTTCTATG+TGG | - | chr2.3:59816910-59816929 | MS.gene74558:CDS | 40.0% | |
AGTTGTGCATCTGAGGAAAA+GGG | + | chr2.3:59816969-59816988 | None:intergenic | 40.0% | |
CAAGAGTTGTTCTCAACTTC+TGG | - | chr2.3:59818841-59818860 | MS.gene74558:intron | 40.0% | |
GCAATATTGGTGTGCTAACA+GGG | - | chr2.3:59818950-59818969 | MS.gene74558:CDS | 40.0% | |
GTTGTGTTAAGAGTTGGATC+GGG | + | chr2.3:59818679-59818698 | None:intergenic | 40.0% | |
TACTGATCTAGTTGCACTCT+CGG | - | chr2.3:59818488-59818507 | MS.gene74558:intron | 40.0% | |
TCAGCACAAGAAACTGTGTT+AGG | + | chr2.3:59818160-59818179 | None:intergenic | 40.0% | |
TCGTTGGATCGAAATTGGTA+AGG | + | chr2.3:59818753-59818772 | None:intergenic | 40.0% | |
TTCTACTATGGATGCTATGG+TGG | + | chr2.3:59819040-59819059 | None:intergenic | 40.0% | |
TTCTCTCTTTAGTGGTCCAA+TGG | + | chr2.3:59817452-59817471 | None:intergenic | 40.0% | |
TTGTACAACTTCAGCAGTAC+TGG | - | chr2.3:59818649-59818668 | MS.gene74558:intron | 40.0% | |
! | GACAGTTCCTTTAGGAAGAA+GGG | - | chr2.3:59818362-59818381 | MS.gene74558:intron | 40.0% |
! | TGATATATAGGTGCTGCACA+AGG | + | chr2.3:59817247-59817266 | None:intergenic | 40.0% |
!! | GTTGTGCTTTTAGTTGTGCT+TGG | - | chr2.3:59816936-59816955 | MS.gene74558:CDS | 40.0% |
!! | TGCAGCTTTAAGTTGATCCA+AGG | + | chr2.3:59818445-59818464 | None:intergenic | 40.0% |
ACTGATCTAGTTGCACTCTC+GGG | - | chr2.3:59818489-59818508 | MS.gene74558:intron | 45.0% | |
AGGAGTCGTTGGATCGAAAT+TGG | + | chr2.3:59818758-59818777 | None:intergenic | 45.0% | |
CCTAAAGGAACTGTCCAACT+AGG | + | chr2.3:59818357-59818376 | None:intergenic | 45.0% | |
CCTAGTTGGACAGTTCCTTT+AGG | - | chr2.3:59818354-59818373 | MS.gene74558:intron | 45.0% | |
GGCAATATTGGTGTGCTAAC+AGG | - | chr2.3:59818949-59818968 | MS.gene74558:CDS | 45.0% | |
TAGGGCATATACCAGAACAG+AGG | + | chr2.3:59818209-59818228 | None:intergenic | 45.0% | |
TCCAAGGAATTGAATGGAGC+CGG | + | chr2.3:59818429-59818448 | None:intergenic | 45.0% | |
! | AAAGCTGCATTTGCTGCTCA+AGG | - | chr2.3:59818456-59818475 | MS.gene74558:intron | 45.0% |
! | GGACAGTTCCTTTAGGAAGA+AGG | - | chr2.3:59818361-59818380 | MS.gene74558:intron | 45.0% |
! | GTTCCTTTAGGAAGAAGGGA+TGG | - | chr2.3:59818366-59818385 | MS.gene74558:intron | 45.0% |
!! | GTGCTTTTAGTTGTGCTTGG+AGG | - | chr2.3:59816939-59816958 | MS.gene74558:CDS | 45.0% |
!! | ATAAAATAAAATAAAAAGAA+GGG | + | chr2.3:59817636-59817655 | None:intergenic | 5.0% |
!! | TATAAAATAAAATAAAAAGA+AGG | + | chr2.3:59817637-59817656 | None:intergenic | 5.0% |
!!! | ATAGATTTTTTTTTATTTTA+AGG | + | chr2.3:59817322-59817341 | None:intergenic | 5.0% |
CGCACAATATGTCCCAATGG+TGG | - | chr2.3:59818715-59818734 | MS.gene74558:intron | 50.0% | |
CTGCGCACAATATGTCCCAA+TGG | - | chr2.3:59818712-59818731 | MS.gene74558:intron | 50.0% | |
GGGACTAAGTTGTGCATCTG+AGG | + | chr2.3:59816976-59816995 | None:intergenic | 50.0% | |
GGTGTGCTAACAGGGACAAA+AGG | - | chr2.3:59818958-59818977 | MS.gene74558:CDS | 50.0% | |
TACAGGCACAAGGTCCTAGT+TGG | - | chr2.3:59818340-59818359 | MS.gene74558:intron | 50.0% | |
TCCGGCTCCATTCAATTCCT+TGG | - | chr2.3:59818425-59818444 | MS.gene74558:intron | 50.0% | |
TGCTCAAGCATCCTCTGTTC+TGG | - | chr2.3:59818195-59818214 | MS.gene74558:intron | 50.0% | |
TTTGTGCCAGGTCCACCATT+GGG | + | chr2.3:59818730-59818749 | None:intergenic | 50.0% | |
!! | ATATGTCCCAATGGTGGACC+TGG | - | chr2.3:59818721-59818740 | MS.gene74558:intron | 50.0% |
ACGAGACTAGCAAGCATGCG+AGG | + | chr2.3:59817074-59817093 | None:intergenic | 55.0% | |
GTTTGTGCCAGGTCCACCAT+TGG | + | chr2.3:59818731-59818750 | None:intergenic | 55.0% | |
! | GCATGCTTGCTAGTCTCGTC+AGG | - | chr2.3:59817075-59817094 | MS.gene74558:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 59816906 | 59819092 | 59816906 | ID=MS.gene74558 |
chr2.3 | mRNA | 59816906 | 59819092 | 59816906 | ID=MS.gene74558.t1;Parent=MS.gene74558 |
chr2.3 | exon | 59818874 | 59819092 | 59818874 | ID=MS.gene74558.t1.exon1;Parent=MS.gene74558.t1 |
chr2.3 | CDS | 59818874 | 59819092 | 59818874 | ID=cds.MS.gene74558.t1;Parent=MS.gene74558.t1 |
chr2.3 | exon | 59817782 | 59817973 | 59817782 | ID=MS.gene74558.t1.exon2;Parent=MS.gene74558.t1 |
chr2.3 | CDS | 59817782 | 59817973 | 59817782 | ID=cds.MS.gene74558.t1;Parent=MS.gene74558.t1 |
chr2.3 | exon | 59817488 | 59817653 | 59817488 | ID=MS.gene74558.t1.exon3;Parent=MS.gene74558.t1 |
chr2.3 | CDS | 59817488 | 59817653 | 59817488 | ID=cds.MS.gene74558.t1;Parent=MS.gene74558.t1 |
chr2.3 | exon | 59816906 | 59817396 | 59816906 | ID=MS.gene74558.t1.exon4;Parent=MS.gene74558.t1 |
chr2.3 | CDS | 59816906 | 59817396 | 59816906 | ID=cds.MS.gene74558.t1;Parent=MS.gene74558.t1 |
Gene Sequence |
Protein sequence |