Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02085.t1 | AAB41811.1 | 98.9 | 353 | 4 | 0 | 1 | 353 | 1 | 353 | 8.70E-197 | 696 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02085.t1 | Q9LEH3 | 60.6 | 330 | 125 | 2 | 3 | 331 | 2 | 327 | 1.7e-103 | 377.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02085.t1 | Q40366 | 98.9 | 353 | 4 | 0 | 1 | 353 | 1 | 353 | 6.3e-197 | 696.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02085.t1 | MTR_2g029850 | 96.286 | 350 | 13 | 0 | 4 | 353 | 3 | 352 | 0.0 | 692 |
MS.gene02085.t1 | MTR_2g029860 | 77.650 | 349 | 75 | 3 | 7 | 353 | 6 | 353 | 0.0 | 543 |
MS.gene02085.t1 | MTR_2g029820 | 71.831 | 355 | 96 | 2 | 1 | 352 | 1 | 354 | 0.0 | 525 |
MS.gene02085.t1 | MTR_2g029910 | 73.729 | 354 | 91 | 2 | 1 | 353 | 1 | 353 | 0.0 | 521 |
MS.gene02085.t1 | MTR_2g029800 | 71.591 | 352 | 95 | 2 | 4 | 352 | 3 | 352 | 0.0 | 514 |
MS.gene02085.t1 | MTR_2g029815 | 70.739 | 352 | 102 | 1 | 1 | 352 | 1 | 351 | 0.0 | 509 |
MS.gene02085.t1 | MTR_2g029830 | 72.072 | 333 | 89 | 2 | 23 | 351 | 21 | 353 | 1.20e-172 | 484 |
MS.gene02085.t1 | MTR_2g028980 | 66.193 | 352 | 116 | 1 | 4 | 352 | 3 | 354 | 3.05e-168 | 473 |
MS.gene02085.t1 | MTR_2g029740 | 65.909 | 352 | 117 | 1 | 4 | 352 | 3 | 354 | 2.97e-167 | 470 |
MS.gene02085.t1 | MTR_2g029750 | 65.057 | 352 | 119 | 2 | 4 | 352 | 3 | 353 | 5.87e-162 | 457 |
MS.gene02085.t1 | MTR_2g029730 | 64.826 | 344 | 111 | 3 | 10 | 352 | 10 | 344 | 4.80e-154 | 437 |
MS.gene02085.t1 | MTR_2g029560 | 62.647 | 340 | 119 | 2 | 14 | 353 | 13 | 344 | 3.46e-151 | 429 |
MS.gene02085.t1 | MTR_2g029830 | 72.242 | 281 | 74 | 2 | 75 | 351 | 5 | 285 | 1.16e-143 | 408 |
MS.gene02085.t1 | MTR_7g093370 | 57.751 | 329 | 136 | 2 | 5 | 332 | 46 | 372 | 1.88e-128 | 373 |
MS.gene02085.t1 | MTR_1g054205 | 58.333 | 312 | 129 | 1 | 22 | 332 | 16 | 327 | 1.37e-124 | 361 |
MS.gene02085.t1 | MTR_2g029880 | 72.897 | 214 | 47 | 3 | 140 | 353 | 7 | 209 | 1.32e-104 | 306 |
MS.gene02085.t1 | MTR_4g125940 | 49.850 | 333 | 161 | 3 | 1 | 331 | 1 | 329 | 1.37e-102 | 305 |
MS.gene02085.t1 | MTR_8g076820 | 50.000 | 298 | 148 | 1 | 34 | 331 | 34 | 330 | 8.21e-100 | 298 |
MS.gene02085.t1 | MTR_5g021060 | 49.329 | 298 | 150 | 1 | 34 | 331 | 34 | 330 | 2.72e-98 | 294 |
MS.gene02085.t1 | MTR_1g022970 | 49.007 | 302 | 154 | 0 | 30 | 331 | 46 | 347 | 1.59e-97 | 293 |
MS.gene02085.t1 | MTR_2g084080 | 47.812 | 320 | 158 | 2 | 12 | 331 | 7 | 317 | 2.20e-97 | 291 |
MS.gene02085.t1 | MTR_2g084110 | 50.161 | 311 | 144 | 3 | 22 | 331 | 17 | 317 | 7.76e-97 | 290 |
MS.gene02085.t1 | MTR_7g072510 | 45.938 | 320 | 156 | 3 | 12 | 331 | 10 | 312 | 1.20e-96 | 290 |
MS.gene02085.t1 | MTR_2g040000 | 48.693 | 306 | 152 | 2 | 29 | 331 | 28 | 331 | 1.07e-94 | 285 |
MS.gene02085.t1 | MTR_2g084090 | 48.232 | 311 | 151 | 3 | 22 | 331 | 17 | 318 | 4.52e-94 | 283 |
MS.gene02085.t1 | MTR_5g017850 | 47.869 | 305 | 155 | 3 | 28 | 331 | 25 | 326 | 8.37e-94 | 283 |
MS.gene02085.t1 | MTR_5g017860 | 47.869 | 305 | 155 | 3 | 28 | 331 | 25 | 326 | 8.93e-94 | 283 |
MS.gene02085.t1 | MTR_3g094650 | 47.988 | 323 | 153 | 4 | 7 | 327 | 9 | 318 | 1.44e-93 | 282 |
MS.gene02085.t1 | MTR_4g125940 | 53.818 | 275 | 123 | 2 | 59 | 331 | 2 | 274 | 3.56e-93 | 279 |
MS.gene02085.t1 | MTR_4g029170 | 48.113 | 318 | 154 | 4 | 16 | 331 | 13 | 321 | 3.75e-93 | 281 |
MS.gene02085.t1 | MTR_2g084020 | 45.679 | 324 | 168 | 2 | 8 | 331 | 3 | 318 | 1.24e-92 | 280 |
MS.gene02085.t1 | MTR_3g072190 | 48.515 | 303 | 147 | 2 | 29 | 331 | 25 | 318 | 1.66e-92 | 279 |
MS.gene02085.t1 | MTR_3g466200 | 46.789 | 327 | 158 | 5 | 8 | 331 | 7 | 320 | 2.51e-92 | 279 |
MS.gene02085.t1 | MTR_7g072480 | 47.619 | 315 | 156 | 2 | 17 | 331 | 11 | 316 | 9.78e-92 | 277 |
MS.gene02085.t1 | MTR_4g029200 | 47.588 | 311 | 152 | 4 | 22 | 331 | 38 | 338 | 1.01e-91 | 278 |
MS.gene02085.t1 | MTR_4g029180 | 49.333 | 300 | 141 | 4 | 34 | 331 | 31 | 321 | 4.61e-91 | 276 |
MS.gene02085.t1 | MTR_2g084010 | 45.988 | 324 | 167 | 2 | 8 | 331 | 3 | 318 | 5.03e-91 | 275 |
MS.gene02085.t1 | MTR_2g088770 | 46.226 | 318 | 165 | 5 | 16 | 331 | 12 | 325 | 1.50e-90 | 275 |
MS.gene02085.t1 | MTR_4g083710 | 45.289 | 329 | 170 | 3 | 6 | 331 | 3 | 324 | 1.02e-89 | 272 |
MS.gene02085.t1 | MTR_5g074970 | 45.399 | 326 | 161 | 5 | 12 | 331 | 12 | 326 | 4.03e-87 | 266 |
MS.gene02085.t1 | MTR_5g014100 | 45.752 | 306 | 162 | 2 | 30 | 331 | 26 | 331 | 4.81e-87 | 266 |
MS.gene02085.t1 | MTR_2g084000 | 46.078 | 306 | 155 | 3 | 27 | 331 | 23 | 319 | 1.01e-86 | 265 |
MS.gene02085.t1 | MTR_4g029190 | 43.353 | 346 | 168 | 6 | 5 | 331 | 4 | 340 | 1.52e-85 | 262 |
MS.gene02085.t1 | MTR_1g115900 | 42.813 | 327 | 176 | 5 | 8 | 332 | 5 | 322 | 2.18e-84 | 259 |
MS.gene02085.t1 | MTR_4g114210 | 44.375 | 320 | 166 | 6 | 17 | 331 | 8 | 320 | 2.74e-84 | 258 |
MS.gene02085.t1 | MTR_4g122640 | 41.349 | 341 | 181 | 5 | 5 | 331 | 1 | 336 | 5.47e-84 | 258 |
MS.gene02085.t1 | MTR_3g094670 | 45.820 | 323 | 160 | 4 | 7 | 327 | 9 | 318 | 1.15e-83 | 257 |
MS.gene02085.t1 | MTR_5g083860 | 44.179 | 335 | 170 | 7 | 3 | 331 | 2 | 325 | 2.53e-83 | 256 |
MS.gene02085.t1 | MTR_4g074995 | 44.514 | 319 | 154 | 4 | 16 | 331 | 10 | 308 | 2.56e-83 | 255 |
MS.gene02085.t1 | MTR_4g046713 | 42.056 | 321 | 178 | 5 | 12 | 331 | 13 | 326 | 5.17e-83 | 255 |
MS.gene02085.t1 | MTR_5g074860 | 45.652 | 322 | 164 | 5 | 12 | 330 | 11 | 324 | 1.45e-82 | 254 |
MS.gene02085.t1 | MTR_3g094630 | 45.566 | 327 | 163 | 4 | 7 | 331 | 9 | 322 | 2.76e-82 | 253 |
MS.gene02085.t1 | MTR_5g049280 | 42.222 | 315 | 171 | 6 | 24 | 331 | 27 | 337 | 3.80e-82 | 253 |
MS.gene02085.t1 | MTR_7g107520 | 42.500 | 320 | 178 | 4 | 12 | 331 | 7 | 320 | 1.23e-81 | 251 |
MS.gene02085.t1 | MTR_4g030890 | 42.997 | 307 | 170 | 3 | 25 | 331 | 95 | 396 | 2.31e-81 | 254 |
MS.gene02085.t1 | MTR_3g467600 | 45.631 | 309 | 158 | 4 | 26 | 331 | 23 | 324 | 4.07e-81 | 250 |
MS.gene02085.t1 | MTR_5g074760 | 42.560 | 336 | 177 | 5 | 1 | 333 | 1 | 323 | 6.95e-80 | 247 |
MS.gene02085.t1 | MTR_3g466180 | 42.857 | 315 | 171 | 2 | 17 | 331 | 18 | 323 | 1.25e-79 | 246 |
MS.gene02085.t1 | MTR_3g092990 | 40.184 | 326 | 189 | 3 | 7 | 331 | 6 | 326 | 1.28e-79 | 246 |
MS.gene02085.t1 | MTR_5g074740 | 44.300 | 307 | 160 | 4 | 28 | 331 | 23 | 321 | 1.40e-79 | 246 |
MS.gene02085.t1 | MTR_4g031140 | 41.806 | 299 | 169 | 3 | 34 | 332 | 32 | 325 | 1.49e-79 | 247 |
MS.gene02085.t1 | MTR_1g086320 | 39.879 | 331 | 188 | 5 | 7 | 331 | 8 | 333 | 5.50e-79 | 245 |
MS.gene02085.t1 | MTR_4g074990 | 43.260 | 319 | 152 | 5 | 16 | 331 | 13 | 305 | 1.06e-78 | 243 |
MS.gene02085.t1 | MTR_1g086490 | 39.583 | 336 | 189 | 5 | 7 | 331 | 8 | 340 | 2.32e-78 | 244 |
MS.gene02085.t1 | MTR_5g074710 | 44.300 | 307 | 160 | 4 | 28 | 331 | 23 | 321 | 5.43e-78 | 242 |
MS.gene02085.t1 | MTR_4g133800 | 43.000 | 300 | 156 | 7 | 35 | 331 | 46 | 333 | 6.72e-78 | 242 |
MS.gene02085.t1 | MTR_8g075100 | 42.222 | 315 | 158 | 9 | 25 | 331 | 21 | 319 | 1.25e-77 | 241 |
MS.gene02085.t1 | MTR_2g008710 | 42.667 | 300 | 165 | 4 | 34 | 331 | 31 | 325 | 2.23e-77 | 241 |
MS.gene02085.t1 | MTR_7g026990 | 41.424 | 309 | 170 | 5 | 25 | 332 | 25 | 323 | 3.23e-77 | 240 |
MS.gene02085.t1 | MTR_6g043280 | 44.620 | 316 | 153 | 7 | 18 | 331 | 37 | 332 | 8.07e-76 | 237 |
MS.gene02085.t1 | MTR_0155s0040 | 39.875 | 321 | 174 | 6 | 11 | 331 | 14 | 315 | 8.42e-76 | 236 |
MS.gene02085.t1 | MTR_5g016010 | 39.759 | 332 | 191 | 5 | 3 | 330 | 2 | 328 | 1.04e-75 | 236 |
MS.gene02085.t1 | MTR_2g437770 | 42.089 | 316 | 167 | 7 | 22 | 332 | 38 | 342 | 1.40e-75 | 237 |
MS.gene02085.t1 | MTR_3g072190 | 48.263 | 259 | 125 | 2 | 73 | 331 | 2 | 251 | 2.16e-75 | 233 |
MS.gene02085.t1 | MTR_7g086820 | 40.132 | 304 | 173 | 5 | 28 | 331 | 18 | 312 | 1.07e-74 | 233 |
MS.gene02085.t1 | MTR_5g022870 | 40.584 | 308 | 173 | 7 | 25 | 331 | 18 | 316 | 1.44e-74 | 233 |
MS.gene02085.t1 | MTR_4g132490 | 40.000 | 330 | 190 | 5 | 5 | 331 | 3 | 327 | 2.49e-74 | 233 |
MS.gene02085.t1 | MTR_4g074980 | 42.405 | 316 | 148 | 5 | 16 | 331 | 13 | 294 | 2.03e-73 | 229 |
MS.gene02085.t1 | MTR_1g009750 | 40.656 | 305 | 177 | 2 | 29 | 331 | 26 | 328 | 4.70e-72 | 227 |
MS.gene02085.t1 | MTR_6g043240 | 43.791 | 306 | 154 | 8 | 30 | 332 | 42 | 332 | 5.13e-72 | 228 |
MS.gene02085.t1 | MTR_1g101830 | 39.216 | 306 | 180 | 4 | 26 | 331 | 23 | 322 | 7.44e-72 | 226 |
MS.gene02085.t1 | MTR_4g087965 | 40.984 | 305 | 173 | 5 | 29 | 328 | 41 | 343 | 4.06e-71 | 225 |
MS.gene02085.t1 | MTR_1g077000 | 39.735 | 302 | 169 | 5 | 30 | 331 | 39 | 327 | 1.14e-70 | 224 |
MS.gene02085.t1 | MTR_1g038680 | 40.264 | 303 | 173 | 5 | 34 | 331 | 33 | 332 | 1.94e-70 | 223 |
MS.gene02085.t1 | MTR_1g025980 | 40.391 | 307 | 164 | 7 | 30 | 330 | 24 | 317 | 1.06e-69 | 221 |
MS.gene02085.t1 | MTR_4g127670 | 42.193 | 301 | 168 | 3 | 29 | 327 | 23 | 319 | 1.49e-69 | 221 |
MS.gene02085.t1 | MTR_7g029030 | 39.088 | 307 | 181 | 2 | 25 | 331 | 20 | 320 | 4.62e-69 | 219 |
MS.gene02085.t1 | MTR_4g074980 | 44.980 | 249 | 126 | 3 | 16 | 261 | 13 | 253 | 1.11e-67 | 213 |
MS.gene02085.t1 | MTR_3g092990 | 38.037 | 326 | 185 | 4 | 7 | 331 | 6 | 315 | 1.12e-67 | 216 |
MS.gene02085.t1 | MTR_1g090760 | 36.283 | 339 | 207 | 5 | 1 | 335 | 1 | 334 | 2.61e-67 | 215 |
MS.gene02085.t1 | MTR_2g008160 | 40.836 | 311 | 172 | 7 | 26 | 331 | 20 | 323 | 1.18e-66 | 213 |
MS.gene02085.t1 | MTR_6g043460 | 41.667 | 300 | 162 | 6 | 30 | 327 | 36 | 324 | 1.44e-66 | 214 |
MS.gene02085.t1 | MTR_4g095450 | 39.815 | 324 | 177 | 6 | 8 | 327 | 11 | 320 | 3.59e-66 | 212 |
MS.gene02085.t1 | MTR_7g086870 | 38.816 | 304 | 174 | 6 | 28 | 331 | 20 | 311 | 5.90e-64 | 206 |
MS.gene02085.t1 | MTR_6g027440 | 37.771 | 323 | 192 | 6 | 9 | 331 | 1 | 314 | 1.26e-63 | 205 |
MS.gene02085.t1 | MTR_2g099175 | 37.662 | 308 | 180 | 6 | 29 | 331 | 35 | 335 | 1.07e-62 | 203 |
MS.gene02085.t1 | MTR_0147s0010 | 37.346 | 324 | 167 | 5 | 27 | 330 | 74 | 381 | 3.27e-62 | 203 |
MS.gene02085.t1 | MTR_5g074860 | 39.130 | 322 | 146 | 4 | 12 | 330 | 11 | 285 | 4.01e-62 | 200 |
MS.gene02085.t1 | MTR_8g062780 | 36.250 | 320 | 195 | 5 | 16 | 331 | 10 | 324 | 8.24e-62 | 201 |
MS.gene02085.t1 | MTR_1g009750 | 37.049 | 305 | 171 | 3 | 29 | 331 | 26 | 311 | 1.88e-61 | 199 |
MS.gene02085.t1 | MTR_3g105790 | 39.806 | 309 | 178 | 4 | 25 | 331 | 20 | 322 | 2.71e-61 | 199 |
MS.gene02085.t1 | MTR_2g067440 | 35.043 | 351 | 188 | 7 | 16 | 330 | 40 | 386 | 7.50e-61 | 200 |
MS.gene02085.t1 | MTR_2g078610 | 34.188 | 351 | 192 | 6 | 15 | 328 | 55 | 403 | 1.16e-59 | 197 |
MS.gene02085.t1 | MTR_2g077990 | 34.758 | 351 | 188 | 7 | 15 | 327 | 55 | 402 | 4.82e-59 | 196 |
MS.gene02085.t1 | MTR_5g033470 | 34.185 | 313 | 193 | 7 | 27 | 331 | 70 | 377 | 7.77e-58 | 192 |
MS.gene02085.t1 | MTR_2g067450 | 37.380 | 313 | 174 | 7 | 28 | 330 | 9 | 309 | 6.51e-56 | 185 |
MS.gene02085.t1 | MTR_2g008730 | 36.333 | 300 | 160 | 4 | 34 | 331 | 31 | 301 | 6.46e-55 | 182 |
MS.gene02085.t1 | MTR_0286s0010 | 34.516 | 310 | 194 | 6 | 26 | 331 | 30 | 334 | 8.49e-55 | 183 |
MS.gene02085.t1 | MTR_6g008075 | 34.516 | 310 | 194 | 6 | 26 | 331 | 30 | 334 | 8.49e-55 | 183 |
MS.gene02085.t1 | MTR_2g078280 | 34.897 | 341 | 181 | 8 | 15 | 317 | 55 | 392 | 8.84e-55 | 184 |
MS.gene02085.t1 | MTR_1g066710 | 35.275 | 309 | 189 | 5 | 28 | 333 | 25 | 325 | 4.23e-54 | 181 |
MS.gene02085.t1 | MTR_1g066680 | 36.218 | 312 | 181 | 6 | 28 | 333 | 25 | 324 | 5.16e-54 | 181 |
MS.gene02085.t1 | MTR_1g066380 | 34.615 | 312 | 187 | 5 | 28 | 333 | 25 | 325 | 1.40e-52 | 177 |
MS.gene02085.t1 | MTR_1g066640 | 35.577 | 312 | 184 | 5 | 28 | 333 | 25 | 325 | 2.46e-52 | 176 |
MS.gene02085.t1 | MTR_4g132110 | 35.127 | 316 | 184 | 6 | 26 | 331 | 24 | 328 | 1.24e-51 | 174 |
MS.gene02085.t1 | MTR_4g132110 | 34.891 | 321 | 183 | 8 | 26 | 331 | 24 | 333 | 8.23e-50 | 170 |
MS.gene02085.t1 | MTR_2g008160 | 35.370 | 311 | 154 | 7 | 26 | 331 | 20 | 288 | 3.60e-49 | 167 |
MS.gene02085.t1 | MTR_2g008160 | 45.402 | 174 | 91 | 3 | 26 | 199 | 20 | 189 | 5.22e-44 | 150 |
MS.gene02085.t1 | MTR_1g066380 | 36.090 | 266 | 153 | 5 | 74 | 333 | 3 | 257 | 1.50e-43 | 151 |
MS.gene02085.t1 | MTR_5g074700 | 40.517 | 232 | 113 | 6 | 103 | 331 | 5 | 214 | 2.37e-43 | 149 |
MS.gene02085.t1 | MTR_3g072210 | 46.073 | 191 | 94 | 4 | 142 | 331 | 56 | 238 | 2.84e-43 | 150 |
MS.gene02085.t1 | MTR_3g105790 | 39.506 | 243 | 142 | 3 | 91 | 331 | 7 | 246 | 3.86e-43 | 150 |
MS.gene02085.t1 | MTR_7g072490 | 38.000 | 250 | 92 | 4 | 75 | 324 | 1 | 187 | 2.37e-39 | 139 |
MS.gene02085.t1 | MTR_3g072260 | 55.833 | 120 | 51 | 1 | 29 | 148 | 25 | 142 | 5.44e-37 | 130 |
MS.gene02085.t1 | MTR_2g029930 | 57.522 | 113 | 20 | 3 | 15 | 113 | 4 | 102 | 4.43e-32 | 116 |
MS.gene02085.t1 | MTR_2g078560 | 30.973 | 226 | 123 | 5 | 136 | 330 | 96 | 319 | 3.16e-26 | 107 |
MS.gene02085.t1 | MTR_7g086790 | 34.010 | 197 | 106 | 5 | 77 | 272 | 17 | 190 | 7.49e-26 | 102 |
MS.gene02085.t1 | MTR_5g058120 | 39.264 | 163 | 86 | 3 | 165 | 327 | 6 | 155 | 4.02e-25 | 102 |
MS.gene02085.t1 | MTR_2g077980 | 30.483 | 269 | 144 | 8 | 99 | 328 | 17 | 281 | 1.26e-24 | 102 |
MS.gene02085.t1 | MTR_1g089005 | 38.931 | 131 | 66 | 3 | 15 | 139 | 7 | 129 | 7.15e-20 | 85.5 |
MS.gene02085.t1 | MTR_3g462850 | 35.862 | 145 | 82 | 6 | 194 | 331 | 9 | 149 | 1.42e-17 | 79.0 |
MS.gene02085.t1 | MTR_6g048160 | 54.930 | 71 | 28 | 2 | 69 | 139 | 22 | 88 | 3.83e-17 | 76.3 |
MS.gene02085.t1 | MTR_4g012865 | 50.746 | 67 | 33 | 0 | 27 | 93 | 74 | 140 | 4.01e-17 | 77.8 |
MS.gene02085.t1 | MTR_4g114220 | 51.282 | 78 | 28 | 2 | 57 | 134 | 30 | 97 | 2.24e-16 | 75.5 |
MS.gene02085.t1 | MTR_1g098320 | 46.988 | 83 | 42 | 1 | 252 | 334 | 47 | 127 | 1.35e-15 | 73.2 |
MS.gene02085.t1 | MTR_7g107500 | 44.444 | 99 | 51 | 3 | 233 | 331 | 3 | 97 | 2.53e-14 | 68.6 |
MS.gene02085.t1 | MTR_4g031040 | 30.814 | 172 | 75 | 3 | 92 | 263 | 4 | 131 | 5.31e-14 | 68.9 |
MS.gene02085.t1 | MTR_3g107060 | 25.373 | 268 | 150 | 9 | 45 | 310 | 91 | 310 | 1.29e-12 | 68.2 |
MS.gene02085.t1 | MTR_7g086810 | 30.579 | 121 | 58 | 1 | 28 | 148 | 4 | 98 | 2.13e-12 | 66.6 |
MS.gene02085.t1 | MTR_5g074770 | 39.535 | 86 | 51 | 1 | 245 | 330 | 24 | 108 | 1.52e-11 | 61.2 |
MS.gene02085.t1 | MTR_7g086785 | 31.618 | 136 | 86 | 3 | 75 | 207 | 3 | 134 | 8.28e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02085.t1 | AT5G06720 | 57.862 | 318 | 134 | 0 | 15 | 332 | 17 | 334 | 8.50e-128 | 370 |
MS.gene02085.t1 | AT5G06730 | 54.896 | 337 | 152 | 0 | 15 | 351 | 18 | 354 | 3.46e-127 | 369 |
MS.gene02085.t1 | AT4G08770 | 55.911 | 313 | 136 | 2 | 26 | 336 | 20 | 332 | 2.29e-123 | 359 |
MS.gene02085.t1 | AT3G49110 | 57.827 | 313 | 130 | 2 | 26 | 336 | 29 | 341 | 2.44e-123 | 359 |
MS.gene02085.t1 | AT3G49120 | 55.963 | 327 | 139 | 3 | 15 | 336 | 14 | 340 | 2.55e-123 | 359 |
MS.gene02085.t1 | AT2G38380 | 51.420 | 352 | 161 | 3 | 5 | 352 | 3 | 348 | 4.23e-122 | 356 |
MS.gene02085.t1 | AT2G38390 | 51.412 | 354 | 164 | 3 | 1 | 352 | 1 | 348 | 6.32e-121 | 353 |
MS.gene02085.t1 | AT4G08780 | 54.952 | 313 | 139 | 2 | 26 | 336 | 20 | 332 | 2.16e-120 | 351 |
MS.gene02085.t1 | AT3G32980 | 53.709 | 337 | 151 | 3 | 5 | 336 | 3 | 339 | 6.11e-120 | 350 |
MS.gene02085.t1 | AT5G19880 | 51.456 | 309 | 147 | 2 | 26 | 331 | 21 | 329 | 5.88e-106 | 314 |
MS.gene02085.t1 | AT5G66390 | 46.108 | 334 | 176 | 2 | 1 | 331 | 1 | 333 | 1.63e-100 | 300 |
MS.gene02085.t1 | AT2G18150 | 50.336 | 298 | 147 | 1 | 34 | 331 | 40 | 336 | 2.21e-100 | 300 |
MS.gene02085.t1 | AT2G18140 | 50.671 | 298 | 146 | 1 | 34 | 331 | 39 | 335 | 4.67e-100 | 299 |
MS.gene02085.t1 | AT4G36430 | 48.860 | 307 | 156 | 1 | 25 | 331 | 25 | 330 | 4.90e-99 | 296 |
MS.gene02085.t1 | AT3G50990 | 47.883 | 307 | 159 | 1 | 25 | 331 | 36 | 341 | 9.46e-98 | 293 |
MS.gene02085.t1 | AT1G44970 | 47.022 | 319 | 161 | 1 | 21 | 331 | 28 | 346 | 5.37e-97 | 291 |
MS.gene02085.t1 | AT5G19890 | 48.693 | 306 | 149 | 4 | 28 | 331 | 28 | 327 | 2.40e-92 | 279 |
MS.gene02085.t1 | AT5G05340 | 47.712 | 306 | 149 | 3 | 28 | 331 | 28 | 324 | 9.04e-91 | 275 |
MS.gene02085.t1 | AT1G14540 | 46.372 | 317 | 163 | 3 | 15 | 331 | 6 | 315 | 2.50e-90 | 273 |
MS.gene02085.t1 | AT1G14550 | 45.732 | 328 | 167 | 4 | 5 | 331 | 4 | 321 | 3.71e-90 | 273 |
MS.gene02085.t1 | AT1G49570 | 48.197 | 305 | 153 | 3 | 28 | 329 | 46 | 348 | 6.75e-90 | 274 |
MS.gene02085.t1 | AT4G16270 | 46.535 | 303 | 157 | 4 | 30 | 331 | 50 | 348 | 2.85e-88 | 270 |
MS.gene02085.t1 | AT2G41480 | 43.544 | 333 | 169 | 7 | 9 | 331 | 5 | 328 | 4.13e-85 | 261 |
MS.gene02085.t1 | AT4G11290 | 43.260 | 319 | 177 | 3 | 15 | 331 | 10 | 326 | 5.14e-85 | 260 |
MS.gene02085.t1 | AT1G68850 | 43.564 | 303 | 165 | 5 | 34 | 331 | 34 | 335 | 3.60e-84 | 258 |
MS.gene02085.t1 | AT3G03670 | 41.231 | 325 | 187 | 3 | 7 | 331 | 1 | 321 | 6.60e-84 | 257 |
MS.gene02085.t1 | AT5G58390 | 44.937 | 316 | 162 | 4 | 15 | 327 | 6 | 312 | 9.91e-84 | 257 |
MS.gene02085.t1 | AT2G22420 | 43.960 | 298 | 162 | 3 | 34 | 331 | 27 | 319 | 3.04e-83 | 256 |
MS.gene02085.t1 | AT3G21770 | 43.730 | 311 | 169 | 5 | 19 | 327 | 18 | 324 | 6.84e-83 | 255 |
MS.gene02085.t1 | AT2G35380 | 45.752 | 306 | 162 | 3 | 30 | 331 | 30 | 335 | 1.38e-82 | 254 |
MS.gene02085.t1 | AT1G71695 | 44.410 | 322 | 167 | 6 | 30 | 349 | 44 | 355 | 2.20e-82 | 254 |
MS.gene02085.t1 | AT1G05260 | 40.841 | 333 | 187 | 6 | 1 | 331 | 1 | 325 | 3.68e-82 | 253 |
MS.gene02085.t1 | AT5G58400 | 44.201 | 319 | 163 | 5 | 16 | 331 | 19 | 325 | 9.91e-81 | 249 |
MS.gene02085.t1 | AT5G17820 | 41.776 | 304 | 165 | 5 | 28 | 331 | 22 | 313 | 9.19e-80 | 246 |
MS.gene02085.t1 | AT5G15180 | 41.748 | 309 | 171 | 5 | 26 | 331 | 27 | 329 | 2.01e-79 | 246 |
MS.gene02085.t1 | AT5G64120 | 41.390 | 331 | 183 | 6 | 4 | 331 | 6 | 328 | 3.98e-79 | 245 |
MS.gene02085.t1 | AT5G17820 | 41.776 | 304 | 165 | 5 | 28 | 331 | 75 | 366 | 1.85e-78 | 245 |
MS.gene02085.t1 | AT2G18980 | 42.136 | 337 | 175 | 6 | 1 | 331 | 1 | 323 | 1.95e-78 | 243 |
MS.gene02085.t1 | AT4G30170 | 42.718 | 309 | 166 | 4 | 27 | 331 | 24 | 325 | 3.49e-78 | 243 |
MS.gene02085.t1 | AT5G14130 | 42.947 | 319 | 171 | 6 | 19 | 331 | 17 | 330 | 9.84e-78 | 242 |
MS.gene02085.t1 | AT5G14130 | 42.947 | 319 | 171 | 6 | 19 | 331 | 58 | 371 | 3.43e-77 | 242 |
MS.gene02085.t1 | AT5G39580 | 42.169 | 332 | 170 | 8 | 4 | 331 | 6 | 319 | 9.23e-77 | 239 |
MS.gene02085.t1 | AT4G37530 | 43.871 | 310 | 167 | 5 | 26 | 331 | 23 | 329 | 9.34e-77 | 239 |
MS.gene02085.t1 | AT1G05240 | 41.883 | 308 | 165 | 5 | 30 | 331 | 26 | 325 | 3.76e-76 | 238 |
MS.gene02085.t1 | AT1G05250 | 41.883 | 308 | 165 | 5 | 30 | 331 | 26 | 325 | 3.76e-76 | 238 |
MS.gene02085.t1 | AT3G01190 | 40.994 | 322 | 175 | 9 | 14 | 331 | 11 | 321 | 5.13e-76 | 237 |
MS.gene02085.t1 | AT5G51890 | 41.346 | 312 | 166 | 7 | 26 | 331 | 22 | 322 | 4.53e-74 | 232 |
MS.gene02085.t1 | AT4G25980 | 40.184 | 326 | 180 | 6 | 11 | 331 | 11 | 326 | 2.01e-73 | 231 |
MS.gene02085.t1 | AT2G39040 | 43.087 | 311 | 166 | 6 | 28 | 331 | 44 | 350 | 3.05e-73 | 231 |
MS.gene02085.t1 | AT5G64110 | 42.727 | 330 | 168 | 7 | 14 | 331 | 10 | 330 | 3.60e-73 | 230 |
MS.gene02085.t1 | AT5G67400 | 38.906 | 329 | 194 | 4 | 7 | 331 | 4 | 329 | 2.73e-71 | 225 |
MS.gene02085.t1 | AT3G49960 | 39.634 | 328 | 186 | 7 | 9 | 331 | 9 | 329 | 1.20e-68 | 218 |
MS.gene02085.t1 | AT5G64100 | 40.199 | 301 | 167 | 6 | 34 | 331 | 41 | 331 | 2.11e-68 | 218 |
MS.gene02085.t1 | AT4G37520 | 41.234 | 308 | 174 | 5 | 28 | 331 | 25 | 329 | 2.20e-68 | 218 |
MS.gene02085.t1 | AT4G33420 | 37.273 | 330 | 193 | 6 | 2 | 331 | 10 | 325 | 5.43e-68 | 217 |
MS.gene02085.t1 | AT4G33870 | 35.629 | 334 | 177 | 4 | 30 | 328 | 68 | 398 | 8.33e-68 | 219 |
MS.gene02085.t1 | AT4G26010 | 40.514 | 311 | 163 | 7 | 25 | 331 | 17 | 309 | 1.01e-67 | 216 |
MS.gene02085.t1 | AT4G26010 | 40.514 | 311 | 163 | 7 | 25 | 331 | 45 | 337 | 1.74e-67 | 216 |
MS.gene02085.t1 | AT4G33420 | 37.771 | 323 | 187 | 6 | 9 | 331 | 64 | 372 | 2.39e-67 | 216 |
MS.gene02085.t1 | AT1G77100 | 41.290 | 310 | 168 | 7 | 26 | 331 | 20 | 319 | 2.67e-67 | 214 |
MS.gene02085.t1 | AT4G37520 | 40.909 | 308 | 172 | 6 | 28 | 331 | 25 | 326 | 4.92e-67 | 214 |
MS.gene02085.t1 | AT5G42180 | 38.199 | 322 | 179 | 8 | 15 | 330 | 9 | 316 | 1.59e-66 | 213 |
MS.gene02085.t1 | AT2G24800 | 39.935 | 308 | 174 | 5 | 28 | 331 | 29 | 329 | 5.03e-66 | 212 |
MS.gene02085.t1 | AT4G31760 | 37.425 | 334 | 198 | 5 | 1 | 331 | 1 | 326 | 1.07e-65 | 211 |
MS.gene02085.t1 | AT4G37530 | 44.922 | 256 | 136 | 4 | 26 | 277 | 23 | 277 | 4.14e-65 | 208 |
MS.gene02085.t1 | AT3G28200 | 38.710 | 310 | 178 | 6 | 25 | 331 | 16 | 316 | 1.09e-64 | 208 |
MS.gene02085.t1 | AT5G40150 | 38.658 | 313 | 181 | 5 | 22 | 331 | 24 | 328 | 3.23e-64 | 207 |
MS.gene02085.t1 | AT5G24070 | 37.864 | 309 | 177 | 7 | 34 | 335 | 39 | 339 | 6.86e-62 | 201 |
MS.gene02085.t1 | AT4G17690 | 38.462 | 312 | 167 | 8 | 30 | 331 | 26 | 322 | 8.46e-62 | 201 |
MS.gene02085.t1 | AT1G24110 | 35.366 | 328 | 203 | 6 | 11 | 335 | 5 | 326 | 1.63e-60 | 197 |
MS.gene02085.t1 | AT5G47000 | 36.156 | 307 | 186 | 5 | 28 | 331 | 31 | 330 | 8.56e-60 | 196 |
MS.gene02085.t1 | AT2G35380 | 45.344 | 247 | 131 | 3 | 89 | 331 | 1 | 247 | 9.38e-60 | 193 |
MS.gene02085.t1 | AT2G43480 | 36.228 | 334 | 187 | 9 | 16 | 331 | 10 | 335 | 1.57e-59 | 195 |
MS.gene02085.t1 | AT1G30870 | 36.859 | 312 | 180 | 7 | 30 | 334 | 47 | 348 | 3.16e-59 | 195 |
MS.gene02085.t1 | AT2G34060 | 37.338 | 308 | 184 | 6 | 27 | 328 | 39 | 343 | 8.13e-59 | 194 |
MS.gene02085.t1 | AT5G22410 | 35.738 | 305 | 182 | 8 | 28 | 327 | 26 | 321 | 8.49e-59 | 193 |
MS.gene02085.t1 | AT1G34510 | 36.721 | 305 | 177 | 6 | 28 | 331 | 20 | 309 | 1.77e-57 | 189 |
MS.gene02085.t1 | AT3G17070 | 36.919 | 344 | 195 | 7 | 2 | 331 | 4 | 339 | 1.34e-55 | 185 |
MS.gene02085.t1 | AT4G21960 | 36.275 | 306 | 178 | 5 | 34 | 333 | 35 | 329 | 9.19e-55 | 182 |
MS.gene02085.t1 | AT2G37130 | 35.577 | 312 | 183 | 6 | 27 | 331 | 27 | 327 | 4.34e-53 | 178 |
MS.gene02085.t1 | AT2G37130 | 35.738 | 305 | 178 | 6 | 34 | 331 | 3 | 296 | 1.24e-51 | 173 |
MS.gene02085.t1 | AT4G25980 | 44.385 | 187 | 96 | 4 | 11 | 197 | 56 | 234 | 8.94e-46 | 158 |
MS.gene02085.t1 | AT5G39580 | 40.586 | 239 | 114 | 7 | 4 | 232 | 6 | 226 | 1.12e-43 | 151 |
MS.gene02085.t1 | AT3G17070 | 36.940 | 268 | 152 | 7 | 72 | 331 | 18 | 276 | 7.52e-39 | 139 |
MS.gene02085.t1 | AT2G24800 | 39.881 | 168 | 97 | 1 | 28 | 195 | 29 | 192 | 1.94e-34 | 127 |
Find 68 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACAATGTAACTTTGTTAA+TGG | 0.179025 | 2.2:-58042673 | MS.gene02085:CDS |
ACAGATCTAGTTGCACTTTC+AGG | 0.203942 | 2.2:-58043247 | MS.gene02085:intron |
AACTTTGTTAATGGAAATTC+TGG | 0.240702 | 2.2:-58042664 | MS.gene02085:CDS |
ACGAGTGAGCAAACAGCTTT+TGG | 0.284734 | 2.2:-58044572 | MS.gene02085:CDS |
TGCTGAAATTTCCTCTGTTC+TGG | 0.292342 | 2.2:-58044444 | MS.gene02085:intron |
TTATACAATTTCAGCAATAC+TGG | 0.314890 | 2.2:-58043015 | MS.gene02085:CDS |
ACTTGATAATTCCTTCTATA+GGG | 0.325295 | 2.2:-58044997 | MS.gene02085:CDS |
AGTAAAATTAAAGTGTTAAC+TGG | 0.326483 | 2.2:-58042715 | MS.gene02085:CDS |
AATCCTTAGGTTTGAATAGT+AGG | 0.329533 | 2.2:+58042870 | None:intergenic |
AACTTGATAATTCCTTCTAT+AGG | 0.337654 | 2.2:-58044998 | MS.gene02085:CDS |
TCAAACCTAAGGATTCAAAA+AGG | 0.355435 | 2.2:-58042862 | MS.gene02085:CDS |
AAGCTTCAAAGAAAAGAGTT+TGG | 0.356755 | 2.2:+58042761 | None:intergenic |
AAACTATCTCTTCTTCCTAA+TGG | 0.358275 | 2.2:+58043367 | None:intergenic |
CCTAATGGCACTTTCCAATC+AGG | 0.380919 | 2.2:+58043382 | None:intergenic |
CTCTTCTTTCAGTCTCTCAT+TGG | 0.381133 | 2.2:-58045078 | MS.gene02085:CDS |
CGAACAATGGAATGAACATT+AGG | 0.390558 | 2.2:+58044966 | None:intergenic |
TGGTAGCACCCTCACTGATT+TGG | 0.390806 | 2.2:-58042923 | MS.gene02085:CDS |
TAGGCCGAGTCGAATGTATC+TGG | 0.391018 | 2.2:+58042889 | None:intergenic |
GGAAATAACAACTCAATAAG+AGG | 0.392602 | 2.2:-58044551 | MS.gene02085:CDS |
CGACTCTCTGGTGACTTTAG+TGG | 0.401206 | 2.2:+58042636 | None:intergenic |
TAACAACTCAATAAGAGGTT+TGG | 0.401893 | 2.2:-58044546 | MS.gene02085:CDS |
TGCTGTGTAGTGGTTGTGCT+TGG | 0.416566 | 2.2:-58045047 | MS.gene02085:CDS |
TGCAGGCTCATGGTCCTGAT+TGG | 0.421033 | 2.2:-58043396 | MS.gene02085:intron |
AGGACAAGTGTCCCTATAGA+AGG | 0.426368 | 2.2:+58044986 | None:intergenic |
AAACTTTGATAGACAAGGTC+TGG | 0.436585 | 2.2:-58043275 | MS.gene02085:CDS |
TGTTCTCAATGTTTGTAAGT+AGG | 0.437059 | 2.2:+58042966 | None:intergenic |
CCTGATTGGAAAGTGCCATT+AGG | 0.443282 | 2.2:-58043382 | MS.gene02085:CDS |
TTACTTGAACAAAGCAATCA+TGG | 0.449029 | 2.2:+58044877 | None:intergenic |
CACTTGTGGAAGACAATACT+TGG | 0.453813 | 2.2:+58042824 | None:intergenic |
CCATTGTTCGTGAAGTACTA+AGG | 0.455847 | 2.2:-58044953 | MS.gene02085:CDS |
ACCATCCTCTGACGACTCTC+TGG | 0.456258 | 2.2:+58042624 | None:intergenic |
CTAAGGTTGAAAGCGGGACT+AGG | 0.465831 | 2.2:+58043310 | None:intergenic |
TGTGTAGTGGTTGTGCTTGG+AGG | 0.472368 | 2.2:-58045044 | MS.gene02085:CDS |
TCAGCACAAGAAACAGTGTT+AGG | 0.474603 | 2.2:+58044482 | None:intergenic |
GGTTGTGTTGAGAGTTGGAT+CGG | 0.510394 | 2.2:+58042987 | None:intergenic |
GTGTAGTGGTTGTGCTTGGA+GGG | 0.511558 | 2.2:-58045043 | MS.gene02085:CDS |
AATCGTGTCCGCGCCACTTG+TGG | 0.515958 | 2.2:+58042810 | None:intergenic |
GTTGTGTTGAGAGTTGGATC+GGG | 0.519078 | 2.2:+58042988 | None:intergenic |
GTGCTACCAGGTCCACCATT+GGG | 0.521697 | 2.2:+58042937 | None:intergenic |
AAGTAGGTTGTGTTGAGAGT+TGG | 0.531334 | 2.2:+58042982 | None:intergenic |
CCTTAGTACTTCACGAACAA+TGG | 0.533136 | 2.2:+58044953 | None:intergenic |
CGGCCTACTATTCAAACCTA+AGG | 0.534403 | 2.2:-58042873 | MS.gene02085:CDS |
ATATGTCCCAATGGTGGACC+TGG | 0.538663 | 2.2:-58042943 | MS.gene02085:CDS |
AAGTTGTGCATTTGAAGAGA+AGG | 0.538902 | 2.2:+58045016 | None:intergenic |
TCGAATGTATCTGGAGTGGT+TGG | 0.542044 | 2.2:+58042898 | None:intergenic |
TAACATAATTTGCAGGCTCA+TGG | 0.549890 | 2.2:-58043406 | MS.gene02085:intron |
GGCAGCTTTGTGCTGTGTAG+TGG | 0.549901 | 2.2:-58045057 | MS.gene02085:CDS |
CACTCCAGATACATTCGACT+CGG | 0.554414 | 2.2:-58042893 | MS.gene02085:CDS |
GGTGCTCATACAATTGGTAG+AGG | 0.557485 | 2.2:-58043063 | MS.gene02085:CDS |
GGTGCTACCAGGTCCACCAT+TGG | 0.558869 | 2.2:+58042936 | None:intergenic |
ACCAGAGAGTCGTCAGAGGA+TGG | 0.568887 | 2.2:-58042625 | MS.gene02085:CDS |
AAATCAGTGAGGGTGCTACC+AGG | 0.569044 | 2.2:+58042925 | None:intergenic |
AGTTGTGCATTTGAAGAGAA+GGG | 0.569161 | 2.2:+58045017 | None:intergenic |
AAAGTGTTAACTGGATCTCA+AGG | 0.570509 | 2.2:-58042706 | MS.gene02085:CDS |
CAAGTATTGTCTTCCACAAG+TGG | 0.571698 | 2.2:-58042823 | MS.gene02085:CDS |
CTCACTCGTAATCGTCGAAG+TGG | 0.599207 | 2.2:+58044586 | None:intergenic |
CAGTTCACTAAGGTTGAAAG+CGG | 0.609485 | 2.2:+58043303 | None:intergenic |
TTGAGAACAATATGTCCCAA+TGG | 0.615307 | 2.2:-58042952 | MS.gene02085:CDS |
GTTGTTGAAACTATTGACAA+TGG | 0.615780 | 2.2:+58042786 | None:intergenic |
AGTTCACTAAGGTTGAAAGC+GGG | 0.618851 | 2.2:+58043304 | None:intergenic |
AGAACAATATGTCCCAATGG+TGG | 0.636134 | 2.2:-58042949 | MS.gene02085:CDS |
GGTTGGATCCAAATCAGTGA+GGG | 0.645444 | 2.2:+58042915 | None:intergenic |
AGTCACCAGAGAGTCGTCAG+AGG | 0.647099 | 2.2:-58042629 | MS.gene02085:CDS |
ATTGTCTTCCACAAGTGGCG+CGG | 0.651259 | 2.2:-58042818 | MS.gene02085:CDS |
CGAGTCGAATGTATCTGGAG+TGG | 0.659011 | 2.2:+58042894 | None:intergenic |
AATGGAACATACCAGAACAG+AGG | 0.692344 | 2.2:+58044433 | None:intergenic |
ATCAAACTAGCAAGTATACG+AGG | 0.711443 | 2.2:+58044912 | None:intergenic |
TGGTTGGATCCAAATCAGTG+AGG | 0.728918 | 2.2:+58042914 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATTTCTCTAATTT+AGG | + | chr2.2:58044481-58044500 | None:intergenic | 10.0% |
!! | TAAAAAAAAATAGTACATAT+TGG | + | chr2.2:58042967-58042986 | None:intergenic | 10.0% |
!!! | TACTATTTTTTTTTAAAACT+CGG | - | chr2.2:58042972-58042991 | MS.gene02085:CDS | 10.0% |
!!! | TTCATCATTTTTAATTAATT+AGG | - | chr2.2:58042841-58042860 | MS.gene02085:CDS | 10.0% |
!! | ATAAGCAATAAATAATTAGA+GGG | - | chr2.2:58044075-58044094 | MS.gene02085:intron | 15.0% |
!! | ATAGTTTACATTTGTAAAAA+AGG | + | chr2.2:58044162-58044181 | None:intergenic | 15.0% |
!! | TATAAGCAATAAATAATTAG+AGG | - | chr2.2:58044074-58044093 | MS.gene02085:intron | 15.0% |
!! | TTATATCTATGTTTATGAAA+GGG | - | chr2.2:58043054-58043073 | MS.gene02085:CDS | 15.0% |
!! | TTTATATCTATGTTTATGAA+AGG | - | chr2.2:58043053-58043072 | MS.gene02085:CDS | 15.0% |
!! | TTTATTTGCATTTATGATAA+GGG | + | chr2.2:58044037-58044056 | None:intergenic | 15.0% |
!!! | ATATGTTTTGGTAAATTTTT+AGG | - | chr2.2:58044605-58044624 | MS.gene02085:CDS | 15.0% |
!!! | TTTTATTTGCATTTATGATA+AGG | + | chr2.2:58044038-58044057 | None:intergenic | 15.0% |
!! | AAAAAAAACTTTGATAGACA+AGG | - | chr2.2:58044409-58044428 | MS.gene02085:intron | 20.0% |
!! | AAACAATGTAACTTTGTTAA+TGG | - | chr2.2:58045016-58045035 | MS.gene02085:CDS | 20.0% |
!! | GCTAAATAAGAGTAAAAAAA+AGG | + | chr2.2:58044196-58044215 | None:intergenic | 20.0% |
!! | GTATTTATTAAAGACAAAGT+TGG | + | chr2.2:58043650-58043669 | None:intergenic | 20.0% |
!! | TTCAAATCTCATTTGTAAAA+TGG | + | chr2.2:58044527-58044546 | None:intergenic | 20.0% |
!!! | AGTAAAATTAAAGTGTTAAC+TGG | - | chr2.2:58044974-58044993 | MS.gene02085:CDS | 20.0% |
!!! | CAAATACCAAAAATGTTTTT+CGG | + | chr2.2:58043021-58043040 | None:intergenic | 20.0% |
!!! | TCTAAATCATGTTTAGTTTT+TGG | - | chr2.2:58042871-58042890 | MS.gene02085:CDS | 20.0% |
!!! | TTTACTCATTTTAATCATTG+AGG | + | chr2.2:58044960-58044979 | None:intergenic | 20.0% |
!!! | TTTTACCAAAAACTACAATT+TGG | + | chr2.2:58042902-58042921 | None:intergenic | 20.0% |
! | AAACAAATCAATGCATACTA+AGG | + | chr2.2:58043896-58043915 | None:intergenic | 25.0% |
! | AACTTTGTTAATGGAAATTC+TGG | - | chr2.2:58045025-58045044 | MS.gene02085:CDS | 25.0% |
! | ATGAAAGTGACATAAGAAAA+GGG | - | chr2.2:58043383-58043402 | MS.gene02085:CDS | 25.0% |
! | GTAAACTAGAACTAGAAAAA+TGG | + | chr2.2:58043283-58043302 | None:intergenic | 25.0% |
! | TAGAACTAGAAAAATGGAAA+TGG | + | chr2.2:58043277-58043296 | None:intergenic | 25.0% |
! | TTATACAATTTCAGCAATAC+TGG | - | chr2.2:58044674-58044693 | MS.gene02085:intron | 25.0% |
!! | AACTTGATAATTCCTTCTAT+AGG | - | chr2.2:58042691-58042710 | MS.gene02085:CDS | 25.0% |
!! | ACTTGATAATTCCTTCTATA+GGG | - | chr2.2:58042692-58042711 | MS.gene02085:CDS | 25.0% |
!! | ATTCTAGTAACATAATTTGC+AGG | - | chr2.2:58044276-58044295 | MS.gene02085:intron | 25.0% |
!! | ATTGCTGCAAATTTATTTCT+AGG | - | chr2.2:58043927-58043946 | MS.gene02085:intron | 25.0% |
!! | GCATCTAATTGTATATGTTT+TGG | - | chr2.2:58044593-58044612 | MS.gene02085:CDS | 25.0% |
!! | TAACTCCAAATTGTAGTTTT+TGG | - | chr2.2:58042894-58042913 | MS.gene02085:CDS | 25.0% |
!!! | AGTTTTTTTTCAGTTCACTA+AGG | + | chr2.2:58044399-58044418 | None:intergenic | 25.0% |
!!! | TCTTTTCTTTGAAGCTTTTA+AGG | - | chr2.2:58044934-58044953 | MS.gene02085:CDS | 25.0% |
AAACTATCTCTTCTTCCTAA+TGG | + | chr2.2:58044325-58044344 | None:intergenic | 30.0% | |
AAGCTTCAAAGAAAAGAGTT+TGG | + | chr2.2:58044931-58044950 | None:intergenic | 30.0% | |
AATCCTTAGGTTTGAATAGT+AGG | + | chr2.2:58044822-58044841 | None:intergenic | 30.0% | |
CATGAAAGTGACATAAGAAA+AGG | - | chr2.2:58043382-58043401 | MS.gene02085:CDS | 30.0% | |
GGAAATAACAACTCAATAAG+AGG | - | chr2.2:58043138-58043157 | MS.gene02085:intron | 30.0% | |
GTCTTTCTCTCGTAAAATAT+AGG | - | chr2.2:58043735-58043754 | MS.gene02085:intron | 30.0% | |
GTTGTTGAAACTATTGACAA+TGG | + | chr2.2:58044906-58044925 | None:intergenic | 30.0% | |
TAACAACTCAATAAGAGGTT+TGG | - | chr2.2:58043143-58043162 | MS.gene02085:intron | 30.0% | |
TCAAACCTAAGGATTCAAAA+AGG | - | chr2.2:58044827-58044846 | MS.gene02085:intron | 30.0% | |
TGAAAGTGACATAAGAAAAG+GGG | - | chr2.2:58043384-58043403 | MS.gene02085:CDS | 30.0% | |
TGTTCTCAATGTTTGTAAGT+AGG | + | chr2.2:58044726-58044745 | None:intergenic | 30.0% | |
TTACTTGAACAAAGCAATCA+TGG | + | chr2.2:58042815-58042834 | None:intergenic | 30.0% | |
! | ACTGATCCGAAAAACATTTT+TGG | - | chr2.2:58043012-58043031 | MS.gene02085:CDS | 30.0% |
! | AGGAAGATTTTCATTAGCAA+GGG | + | chr2.2:58044362-58044381 | None:intergenic | 30.0% |
! | ATAAACTAACGAGACGTTTT+AGG | - | chr2.2:58043558-58043577 | MS.gene02085:intron | 30.0% |
! | CTACAAATAATTTTCCGTGA+GGG | + | chr2.2:58043464-58043483 | None:intergenic | 30.0% |
! | TAGGAAGATTTTCATTAGCA+AGG | + | chr2.2:58044363-58044382 | None:intergenic | 30.0% |
! | TCTACAAATAATTTTCCGTG+AGG | + | chr2.2:58043465-58043484 | None:intergenic | 30.0% |
!! | AAAATGTTTTTCGGATCAGT+CGG | + | chr2.2:58043012-58043031 | None:intergenic | 30.0% |
!! | GGGGAAAAAAAGTATTAAAG+TGG | - | chr2.2:58043403-58043422 | MS.gene02085:intron | 30.0% |
!!! | TTTTTAGGTGCTCATACAAT+TGG | - | chr2.2:58044620-58044639 | MS.gene02085:intron | 30.0% |
AAACTTTGATAGACAAGGTC+TGG | - | chr2.2:58044414-58044433 | MS.gene02085:intron | 35.0% | |
AAGTTGTGCATTTGAAGAGA+AGG | + | chr2.2:58042676-58042695 | None:intergenic | 35.0% | |
ACACATATACGTACATCATG+AGG | + | chr2.2:58044573-58044592 | None:intergenic | 35.0% | |
AGTTGTGCATTTGAAGAGAA+GGG | + | chr2.2:58042675-58042694 | None:intergenic | 35.0% | |
ATCAAACTAGCAAGTATACG+AGG | + | chr2.2:58042780-58042799 | None:intergenic | 35.0% | |
ATTTGAACTCCGTTCGTTAA+GGG | - | chr2.2:58044540-58044559 | MS.gene02085:CDS | 35.0% | |
CGAACAATGGAATGAACATT+AGG | + | chr2.2:58042726-58042745 | None:intergenic | 35.0% | |
TAAAACTCGGTATCTGATCA+AGG | - | chr2.2:58042985-58043004 | MS.gene02085:CDS | 35.0% | |
TTGAGAACAATATGTCCCAA+TGG | - | chr2.2:58044737-58044756 | MS.gene02085:intron | 35.0% | |
! | AAAGTGTTAACTGGATCTCA+AGG | - | chr2.2:58044983-58045002 | MS.gene02085:CDS | 35.0% |
! | ACAAGCCTTTTTGAATCCTT+AGG | + | chr2.2:58044835-58044854 | None:intergenic | 35.0% |
! | ATTTGTCGTATTTTCCCTCA+CGG | - | chr2.2:58043447-58043466 | MS.gene02085:intron | 35.0% |
! | CGTCTCGTTAGTTTATTCTT+AGG | + | chr2.2:58043554-58043573 | None:intergenic | 35.0% |
! | TAACATAATTTGCAGGCTCA+TGG | - | chr2.2:58044283-58044302 | MS.gene02085:intron | 35.0% |
AAGTAGGTTGTGTTGAGAGT+TGG | + | chr2.2:58044710-58044729 | None:intergenic | 40.0% | |
AATGGAACATACCAGAACAG+AGG | + | chr2.2:58043259-58043278 | None:intergenic | 40.0% | |
ACAGATCTAGTTGCACTTTC+AGG | - | chr2.2:58044442-58044461 | MS.gene02085:intron | 40.0% | |
AGAACAATATGTCCCAATGG+TGG | - | chr2.2:58044740-58044759 | MS.gene02085:intron | 40.0% | |
AGTTCACTAAGGTTGAAAGC+GGG | + | chr2.2:58044388-58044407 | None:intergenic | 40.0% | |
CACTTGTGGAAGACAATACT+TGG | + | chr2.2:58044868-58044887 | None:intergenic | 40.0% | |
CAGTTCACTAAGGTTGAAAG+CGG | + | chr2.2:58044389-58044408 | None:intergenic | 40.0% | |
CCTTAGTACTTCACGAACAA+TGG | + | chr2.2:58042739-58042758 | None:intergenic | 40.0% | |
CTCTTCTTTCAGTCTCTCAT+TGG | - | chr2.2:58042611-58042630 | MS.gene02085:CDS | 40.0% | |
GACACTCATTGTGAAACAGA+GGG | - | chr2.2:58043830-58043849 | MS.gene02085:intron | 40.0% | |
GATTTGAACTCCGTTCGTTA+AGG | - | chr2.2:58044539-58044558 | MS.gene02085:CDS | 40.0% | |
TCAGCACAAGAAACAGTGTT+AGG | + | chr2.2:58043210-58043229 | None:intergenic | 40.0% | |
TGCTGAAATTTCCTCTGTTC+TGG | - | chr2.2:58043245-58043264 | MS.gene02085:intron | 40.0% | |
! | CAAGTATTGTCTTCCACAAG+TGG | - | chr2.2:58044866-58044885 | MS.gene02085:intron | 40.0% |
! | CCATTGTTCGTGAAGTACTA+AGG | - | chr2.2:58042736-58042755 | MS.gene02085:CDS | 40.0% |
AGGACAAGTGTCCCTATAGA+AGG | + | chr2.2:58042706-58042725 | None:intergenic | 45.0% | |
CACTCCAGATACATTCGACT+CGG | - | chr2.2:58044796-58044815 | MS.gene02085:intron | 45.0% | |
CCTAATGGCACTTTCCAATC+AGG | + | chr2.2:58044310-58044329 | None:intergenic | 45.0% | |
CGACACTCATTGTGAAACAG+AGG | - | chr2.2:58043829-58043848 | MS.gene02085:intron | 45.0% | |
CGGCCTACTATTCAAACCTA+AGG | - | chr2.2:58044816-58044835 | MS.gene02085:intron | 45.0% | |
GGCATATCACCCTTAACGAA+CGG | + | chr2.2:58044552-58044571 | None:intergenic | 45.0% | |
GGTGCTCATACAATTGGTAG+AGG | - | chr2.2:58044626-58044645 | MS.gene02085:intron | 45.0% | |
GGTTGGATCCAAATCAGTGA+GGG | + | chr2.2:58044777-58044796 | None:intergenic | 45.0% | |
GGTTGTGTTGAGAGTTGGAT+CGG | + | chr2.2:58044705-58044724 | None:intergenic | 45.0% | |
GTTGTGTTGAGAGTTGGATC+GGG | + | chr2.2:58044704-58044723 | None:intergenic | 45.0% | |
TGGTTGGATCCAAATCAGTG+AGG | + | chr2.2:58044778-58044797 | None:intergenic | 45.0% | |
! | ACGAGTGAGCAAACAGCTTT+TGG | - | chr2.2:58043117-58043136 | MS.gene02085:intron | 45.0% |
! | TCGAATGTATCTGGAGTGGT+TGG | + | chr2.2:58044794-58044813 | None:intergenic | 45.0% |
!! | CCTGATTGGAAAGTGCCATT+AGG | - | chr2.2:58044307-58044326 | MS.gene02085:intron | 45.0% |
ATTGTCTTCCACAAGTGGCG+CGG | - | chr2.2:58044871-58044890 | MS.gene02085:intron | 50.0% | |
CGACTCTCTGGTGACTTTAG+TGG | + | chr2.2:58045056-58045075 | None:intergenic | 50.0% | |
CGAGTCGAATGTATCTGGAG+TGG | + | chr2.2:58044798-58044817 | None:intergenic | 50.0% | |
CTAAGGTTGAAAGCGGGACT+AGG | + | chr2.2:58044382-58044401 | None:intergenic | 50.0% | |
CTCACTCGTAATCGTCGAAG+TGG | + | chr2.2:58043106-58043125 | None:intergenic | 50.0% | |
GTGTAGTGGTTGTGCTTGGA+GGG | - | chr2.2:58042646-58042665 | MS.gene02085:CDS | 50.0% | |
TAGGCCGAGTCGAATGTATC+TGG | + | chr2.2:58044803-58044822 | None:intergenic | 50.0% | |
TGCTGTGTAGTGGTTGTGCT+TGG | - | chr2.2:58042642-58042661 | MS.gene02085:CDS | 50.0% | |
TGTGTAGTGGTTGTGCTTGG+AGG | - | chr2.2:58042645-58042664 | MS.gene02085:CDS | 50.0% | |
! | TGGTAGCACCCTCACTGATT+TGG | - | chr2.2:58044766-58044785 | MS.gene02085:intron | 50.0% |
!! | AAATCAGTGAGGGTGCTACC+AGG | + | chr2.2:58044767-58044786 | None:intergenic | 50.0% |
!! | ATATGTCCCAATGGTGGACC+TGG | - | chr2.2:58044746-58044765 | MS.gene02085:intron | 50.0% |
ACCAGAGAGTCGTCAGAGGA+TGG | - | chr2.2:58045064-58045083 | MS.gene02085:CDS | 55.0% | |
ACCATCCTCTGACGACTCTC+TGG | + | chr2.2:58045068-58045087 | None:intergenic | 55.0% | |
AGTCACCAGAGAGTCGTCAG+AGG | - | chr2.2:58045060-58045079 | MS.gene02085:CDS | 55.0% | |
GTGCTACCAGGTCCACCATT+GGG | + | chr2.2:58044755-58044774 | None:intergenic | 55.0% | |
TGCAGGCTCATGGTCCTGAT+TGG | - | chr2.2:58044293-58044312 | MS.gene02085:intron | 55.0% | |
! | GGCAGCTTTGTGCTGTGTAG+TGG | - | chr2.2:58042632-58042651 | MS.gene02085:CDS | 55.0% |
AATCGTGTCCGCGCCACTTG+TGG | + | chr2.2:58044882-58044901 | None:intergenic | 60.0% | |
! | GGTGCTACCAGGTCCACCAT+TGG | + | chr2.2:58044756-58044775 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 58042606 | 58045105 | 58042606 | ID=MS.gene02085 |
chr2.2 | mRNA | 58042606 | 58045105 | 58042606 | ID=MS.gene02085.t1;Parent=MS.gene02085 |
chr2.2 | exon | 58044881 | 58045105 | 58044881 | ID=MS.gene02085.t1.exon1;Parent=MS.gene02085.t1 |
chr2.2 | CDS | 58044881 | 58045105 | 58044881 | ID=cds.MS.gene02085.t1;Parent=MS.gene02085.t1 |
chr2.2 | exon | 58044445 | 58044636 | 58044445 | ID=MS.gene02085.t1.exon2;Parent=MS.gene02085.t1 |
chr2.2 | CDS | 58044445 | 58044636 | 58044445 | ID=cds.MS.gene02085.t1;Parent=MS.gene02085.t1 |
chr2.2 | exon | 58043248 | 58043413 | 58043248 | ID=MS.gene02085.t1.exon3;Parent=MS.gene02085.t1 |
chr2.2 | CDS | 58043248 | 58043413 | 58043248 | ID=cds.MS.gene02085.t1;Parent=MS.gene02085.t1 |
chr2.2 | exon | 58042606 | 58043084 | 58042606 | ID=MS.gene02085.t1.exon4;Parent=MS.gene02085.t1 |
chr2.2 | CDS | 58042606 | 58043084 | 58042606 | ID=cds.MS.gene02085.t1;Parent=MS.gene02085.t1 |
Gene Sequence |
Protein sequence |