AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003285

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003285.t1 MTR_2g029830 98.310 355 6 0 1 355 1 355 0.0 712
MS.gene003285.t1 MTR_2g029820 80.672 357 64 2 1 354 1 355 0.0 588
MS.gene003285.t1 MTR_2g029815 81.897 348 62 1 1 347 1 348 0.0 584
MS.gene003285.t1 MTR_2g029800 82.029 345 57 2 1 342 1 343 0.0 577
MS.gene003285.t1 MTR_2g029830 98.227 282 5 0 74 355 6 287 0.0 566
MS.gene003285.t1 MTR_2g028980 71.508 358 96 3 1 355 1 355 0.0 517
MS.gene003285.t1 MTR_2g029740 71.229 358 97 3 1 355 1 355 0.0 510
MS.gene003285.t1 MTR_2g029750 70.670 358 98 3 1 355 1 354 0.0 509
MS.gene003285.t1 MTR_2g029860 70.455 352 96 3 4 353 6 351 2.78e-178 498
MS.gene003285.t1 MTR_2g029850 71.629 356 92 4 1 353 1 350 3.77e-178 498
MS.gene003285.t1 MTR_2g029560 68.358 335 99 1 1 335 4 331 3.69e-166 467
MS.gene003285.t1 MTR_2g029910 67.241 348 106 4 7 353 11 351 7.17e-165 464
MS.gene003285.t1 MTR_2g029730 67.470 332 101 1 4 335 8 332 1.88e-162 458
MS.gene003285.t1 MTR_7g093370 59.568 324 126 2 7 329 52 371 1.45e-133 386
MS.gene003285.t1 MTR_1g054205 56.575 327 139 2 4 329 2 326 6.95e-129 372
MS.gene003285.t1 MTR_5g021060 52.649 302 142 1 28 329 30 330 6.97e-111 327
MS.gene003285.t1 MTR_8g076820 50.165 303 150 1 28 330 30 331 2.00e-107 318
MS.gene003285.t1 MTR_4g125940 50.755 331 158 3 2 330 3 330 1.45e-106 315
MS.gene003285.t1 MTR_2g040000 49.080 326 159 3 8 330 11 332 4.24e-104 309
MS.gene003285.t1 MTR_5g017860 48.916 323 155 4 8 329 13 326 2.26e-103 307
MS.gene003285.t1 MTR_2g084080 46.933 326 164 2 4 329 1 317 1.27e-100 300
MS.gene003285.t1 MTR_5g017850 47.059 323 161 4 8 329 13 326 5.64e-100 298
MS.gene003285.t1 MTR_4g125940 55.072 276 120 2 57 330 2 275 7.45e-99 294
MS.gene003285.t1 MTR_1g022970 49.338 302 153 0 28 329 46 347 1.57e-98 296
MS.gene003285.t1 MTR_3g072190 47.077 325 161 3 7 329 3 318 2.83e-98 294
MS.gene003285.t1 MTR_3g094650 48.287 321 152 4 7 325 10 318 5.26e-97 291
MS.gene003285.t1 MTR_3g466200 48.160 326 154 5 7 329 7 320 6.83e-97 290
MS.gene003285.t1 MTR_2g084000 47.706 327 162 3 4 329 1 319 3.06e-96 289
MS.gene003285.t1 MTR_2g084090 46.483 327 165 3 4 329 1 318 4.73e-96 288
MS.gene003285.t1 MTR_2g084110 45.706 326 168 2 4 329 1 317 6.07e-96 288
MS.gene003285.t1 MTR_7g072510 47.697 304 150 2 26 329 18 312 1.17e-95 287
MS.gene003285.t1 MTR_4g083710 47.305 334 161 5 1 329 1 324 5.81e-95 286
MS.gene003285.t1 MTR_5g074970 47.273 330 159 5 4 329 8 326 9.06e-95 285
MS.gene003285.t1 MTR_4g029200 48.065 310 152 2 20 329 38 338 1.23e-94 285
MS.gene003285.t1 MTR_4g029170 48.265 317 153 4 15 329 14 321 1.94e-94 284
MS.gene003285.t1 MTR_2g084010 45.706 326 169 2 4 329 1 318 2.03e-93 281
MS.gene003285.t1 MTR_2g084020 45.399 326 170 2 4 329 1 318 3.07e-93 281
MS.gene003285.t1 MTR_5g083860 45.988 324 162 4 8 329 13 325 8.39e-93 280
MS.gene003285.t1 MTR_5g049280 45.048 313 167 5 22 330 27 338 2.38e-92 280
MS.gene003285.t1 MTR_3g094670 47.095 327 162 3 1 325 1 318 9.67e-92 277
MS.gene003285.t1 MTR_7g072480 46.201 329 164 3 1 329 1 316 1.23e-91 277
MS.gene003285.t1 MTR_5g074740 45.652 322 164 4 11 329 8 321 6.75e-91 275
MS.gene003285.t1 MTR_5g074760 45.679 324 165 4 11 331 8 323 9.55e-91 275
MS.gene003285.t1 MTR_4g029180 49.000 300 142 4 32 329 31 321 1.81e-90 274
MS.gene003285.t1 MTR_3g094630 47.734 331 159 4 1 329 4 322 1.13e-89 272
MS.gene003285.t1 MTR_2g088770 44.548 321 169 6 11 329 12 325 1.74e-89 272
MS.gene003285.t1 MTR_1g115900 43.692 325 170 5 8 330 9 322 1.92e-89 272
MS.gene003285.t1 MTR_4g122640 45.545 303 160 3 28 329 38 336 3.00e-89 271
MS.gene003285.t1 MTR_4g029190 48.208 307 147 5 26 329 43 340 7.18e-89 271
MS.gene003285.t1 MTR_4g046713 44.828 319 172 3 12 329 11 326 7.46e-89 270
MS.gene003285.t1 MTR_5g074710 45.289 329 169 5 4 329 1 321 3.03e-88 268
MS.gene003285.t1 MTR_5g014100 45.752 306 162 2 28 329 26 331 3.81e-88 268
MS.gene003285.t1 MTR_4g074995 47.368 323 142 7 11 329 10 308 1.67e-87 266
MS.gene003285.t1 MTR_3g466180 45.741 317 163 2 13 329 16 323 2.30e-87 266
MS.gene003285.t1 MTR_7g107520 43.865 326 177 4 4 329 1 320 2.87e-87 266
MS.gene003285.t1 MTR_4g114210 43.478 322 169 6 13 329 7 320 3.83e-86 263
MS.gene003285.t1 MTR_2g029880 62.500 216 66 4 138 353 7 207 8.73e-86 258
MS.gene003285.t1 MTR_2g008710 46.026 302 152 5 32 329 31 325 9.68e-86 262
MS.gene003285.t1 MTR_5g074860 43.827 324 171 4 8 328 9 324 8.93e-85 259
MS.gene003285.t1 MTR_4g074990 45.201 323 146 6 11 329 10 305 2.67e-84 258
MS.gene003285.t1 MTR_4g031140 41.883 308 174 3 28 335 28 330 1.40e-83 257
MS.gene003285.t1 MTR_3g467600 44.136 324 171 3 9 329 8 324 8.83e-83 254
MS.gene003285.t1 MTR_4g030890 42.444 311 174 3 23 333 95 400 6.22e-82 255
MS.gene003285.t1 MTR_7g026990 39.755 327 187 3 4 330 7 323 1.48e-81 251
MS.gene003285.t1 MTR_3g092990 41.250 320 185 2 12 330 10 327 4.33e-81 250
MS.gene003285.t1 MTR_4g133800 43.960 298 156 6 33 329 46 333 4.09e-80 248
MS.gene003285.t1 MTR_3g072190 48.263 259 125 2 71 329 2 251 1.53e-79 244
MS.gene003285.t1 MTR_7g086820 41.639 305 169 5 26 330 18 313 4.20e-79 245
MS.gene003285.t1 MTR_2g437770 43.322 307 162 6 25 330 47 342 1.86e-78 244
MS.gene003285.t1 MTR_5g022870 42.208 308 168 7 23 329 18 316 2.19e-78 243
MS.gene003285.t1 MTR_1g101830 42.671 307 168 5 24 329 23 322 3.65e-78 243
MS.gene003285.t1 MTR_1g038680 42.715 302 167 5 32 329 33 332 7.22e-78 242
MS.gene003285.t1 MTR_8g075100 41.722 302 168 5 28 329 26 319 1.17e-77 241
MS.gene003285.t1 MTR_6g043240 43.119 327 164 8 28 351 42 349 1.53e-77 242
MS.gene003285.t1 MTR_4g074980 43.125 320 146 7 11 329 10 294 1.64e-77 240
MS.gene003285.t1 MTR_4g087965 42.623 305 168 5 27 326 41 343 1.69e-77 242
MS.gene003285.t1 MTR_1g009750 44.625 307 162 5 27 329 26 328 4.02e-77 240
MS.gene003285.t1 MTR_1g086320 39.818 329 188 4 7 329 9 333 5.72e-76 238
MS.gene003285.t1 MTR_6g043280 42.810 306 161 6 28 331 41 334 5.83e-76 238
MS.gene003285.t1 MTR_1g086490 40.719 334 185 5 7 329 9 340 7.33e-76 238
MS.gene003285.t1 MTR_7g029030 41.975 324 173 5 11 329 7 320 2.20e-75 236
MS.gene003285.t1 MTR_4g095450 43.344 323 167 7 8 325 9 320 6.04e-75 234
MS.gene003285.t1 MTR_4g132490 40.000 320 182 5 15 329 13 327 1.74e-74 233
MS.gene003285.t1 MTR_5g016010 41.748 309 173 4 24 328 23 328 6.08e-74 232
MS.gene003285.t1 MTR_4g074980 47.431 253 120 5 11 259 10 253 3.46e-73 228
MS.gene003285.t1 MTR_4g127670 43.894 303 160 5 27 325 23 319 6.83e-73 229
MS.gene003285.t1 MTR_1g025980 39.571 326 189 5 4 329 1 318 8.48e-73 229
MS.gene003285.t1 MTR_1g090760 39.144 327 193 4 8 330 7 331 2.10e-72 228
MS.gene003285.t1 MTR_1g077000 39.404 302 170 6 28 329 39 327 1.35e-70 223
MS.gene003285.t1 MTR_2g008160 41.158 311 171 6 24 329 20 323 7.72e-70 221
MS.gene003285.t1 MTR_7g086870 40.584 308 165 8 26 330 20 312 3.84e-69 219
MS.gene003285.t1 MTR_6g027440 39.252 321 182 7 11 329 5 314 4.47e-69 219
MS.gene003285.t1 MTR_3g092990 38.750 320 182 3 12 330 10 316 1.01e-68 218
MS.gene003285.t1 MTR_5g033470 39.617 313 174 9 26 329 71 377 2.36e-68 219
MS.gene003285.t1 MTR_8g062780 38.226 327 187 5 7 329 9 324 4.49e-68 217
MS.gene003285.t1 MTR_6g043460 40.667 300 165 6 28 325 36 324 4.97e-67 215
MS.gene003285.t1 MTR_2g008730 39.818 329 162 6 6 329 4 301 9.53e-67 213
MS.gene003285.t1 MTR_0155s0040 36.667 330 186 7 8 329 1 315 4.85e-66 211
MS.gene003285.t1 MTR_1g009750 41.042 307 156 6 27 329 26 311 5.02e-66 211
MS.gene003285.t1 MTR_2g099175 38.141 312 175 7 27 330 35 336 1.73e-65 211
MS.gene003285.t1 MTR_3g105790 39.934 303 172 4 26 325 23 318 3.56e-65 209
MS.gene003285.t1 MTR_5g074860 37.963 324 151 4 8 328 9 285 3.36e-64 206
MS.gene003285.t1 MTR_0286s0010 38.264 311 181 7 24 329 30 334 4.75e-62 202
MS.gene003285.t1 MTR_6g008075 38.264 311 181 7 24 329 30 334 4.75e-62 202
MS.gene003285.t1 MTR_1g066710 37.540 309 182 4 26 331 25 325 6.95e-62 201
MS.gene003285.t1 MTR_2g067440 35.522 335 182 6 26 330 58 388 1.42e-60 199
MS.gene003285.t1 MTR_2g078610 36.061 330 176 7 28 325 76 402 1.41e-59 197
MS.gene003285.t1 MTR_2g077990 35.843 332 178 7 26 325 74 402 3.10e-59 196
MS.gene003285.t1 MTR_1g066380 36.570 309 185 4 26 331 25 325 8.36e-58 190
MS.gene003285.t1 MTR_4g132110 36.190 315 190 4 23 334 27 333 1.75e-57 190
MS.gene003285.t1 MTR_1g066640 36.893 309 184 4 26 331 25 325 8.50e-57 188
MS.gene003285.t1 MTR_0147s0010 34.891 321 173 4 28 328 77 381 1.74e-56 189
MS.gene003285.t1 MTR_2g078280 36.025 322 171 7 26 315 74 392 5.11e-56 187
MS.gene003285.t1 MTR_4g132110 36.250 320 188 6 23 334 27 338 5.98e-56 186
MS.gene003285.t1 MTR_1g066680 36.893 309 183 5 26 331 25 324 6.04e-56 186
MS.gene003285.t1 MTR_2g067450 36.808 307 184 6 26 328 9 309 2.50e-54 181
MS.gene003285.t1 MTR_2g008160 36.013 311 152 6 24 329 20 288 1.32e-53 178
MS.gene003285.t1 MTR_3g072210 46.073 191 94 3 140 329 56 238 1.91e-47 160
MS.gene003285.t1 MTR_1g066380 37.308 260 152 4 75 331 6 257 5.93e-47 160
MS.gene003285.t1 MTR_3g105790 39.916 238 137 3 91 325 8 242 2.19e-46 158
MS.gene003285.t1 MTR_2g008160 47.059 170 86 3 24 193 20 185 3.97e-46 156
MS.gene003285.t1 MTR_5g074700 40.773 233 113 5 101 330 5 215 1.18e-45 155
MS.gene003285.t1 MTR_7g072490 38.400 250 91 4 73 322 1 187 1.68e-43 149
MS.gene003285.t1 MTR_3g072260 51.562 128 58 1 13 136 7 134 9.02e-36 127
MS.gene003285.t1 MTR_2g029930 56.140 114 22 3 11 110 2 101 1.30e-31 115
MS.gene003285.t1 MTR_5g058120 40.491 163 84 3 163 325 6 155 2.16e-29 114
MS.gene003285.t1 MTR_2g077980 30.961 281 149 11 90 330 11 286 2.19e-27 109
MS.gene003285.t1 MTR_2g078560 30.531 226 124 5 134 328 96 319 8.47e-27 108
MS.gene003285.t1 MTR_3g462850 39.860 143 81 5 192 330 9 150 2.48e-24 97.4
MS.gene003285.t1 MTR_7g086790 32.292 192 108 4 75 266 17 186 1.44e-23 96.7
MS.gene003285.t1 MTR_1g089005 38.462 130 73 2 14 137 1 129 6.61e-20 85.9
MS.gene003285.t1 MTR_1g098320 43.750 96 52 1 250 345 47 140 4.16e-19 83.2
MS.gene003285.t1 MTR_6g048160 54.930 71 28 2 67 137 22 88 9.50e-18 77.8
MS.gene003285.t1 MTR_4g114220 47.436 78 31 2 55 132 30 97 4.06e-16 74.7
MS.gene003285.t1 MTR_5g074770 42.529 87 49 1 242 328 23 108 1.26e-15 72.4
MS.gene003285.t1 MTR_7g107500 41.414 99 54 3 231 329 3 97 4.05e-14 67.8
MS.gene003285.t1 MTR_3g088160 26.236 263 156 8 62 313 121 356 6.45e-14 72.8
MS.gene003285.t1 MTR_4g012865 45.588 68 37 0 28 95 77 144 7.31e-14 68.9
MS.gene003285.t1 MTR_3g088160 26.236 263 156 8 62 313 121 356 1.01e-13 72.4
MS.gene003285.t1 MTR_7g086810 30.579 121 58 1 26 146 4 98 1.53e-12 67.0
MS.gene003285.t1 MTR_4g031040 27.429 175 83 3 87 261 1 131 1.53e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003285.t1 AT5G06730 54.467 347 154 1 8 354 13 355 5.84e-132 381
MS.gene003285.t1 AT5G06720 56.522 322 140 0 8 329 12 333 9.65e-131 377
MS.gene003285.t1 AT2G38380 56.456 333 134 3 24 355 27 349 3.94e-130 376
MS.gene003285.t1 AT2G38390 54.655 333 140 3 24 355 27 349 1.38e-127 370
MS.gene003285.t1 AT3G32980 54.830 352 154 3 1 347 1 352 5.13e-127 369
MS.gene003285.t1 AT3G49120 55.294 340 147 3 13 347 14 353 4.21e-126 366
MS.gene003285.t1 AT3G49110 55.233 344 147 4 9 347 13 354 7.35e-125 363
MS.gene003285.t1 AT4G08770 55.312 320 141 2 24 341 20 339 4.70e-123 358
MS.gene003285.t1 AT4G08780 54.062 320 145 2 24 341 20 339 4.06e-121 353
MS.gene003285.t1 AT5G19880 49.848 329 160 3 4 329 3 329 1.39e-110 326
MS.gene003285.t1 AT2G18140 51.987 302 144 1 28 329 35 335 1.01e-108 321
MS.gene003285.t1 AT5G66390 49.675 308 154 1 22 329 27 333 1.48e-107 318
MS.gene003285.t1 AT2G18150 50.662 302 148 1 28 329 36 336 1.23e-105 313
MS.gene003285.t1 AT4G36430 50.000 308 153 1 23 330 25 331 8.88e-105 311
MS.gene003285.t1 AT5G19890 53.268 306 135 4 26 329 28 327 3.27e-104 310
MS.gene003285.t1 AT3G50990 49.191 309 156 1 23 331 36 343 1.44e-102 306
MS.gene003285.t1 AT1G44970 49.342 304 154 0 26 329 43 346 2.54e-100 300
MS.gene003285.t1 AT1G14550 50.654 306 141 5 26 329 24 321 9.98e-99 295
MS.gene003285.t1 AT1G14540 50.464 323 151 5 8 329 1 315 2.68e-98 294
MS.gene003285.t1 AT5G05340 48.208 307 148 3 25 329 27 324 6.49e-96 288
MS.gene003285.t1 AT1G68850 46.154 312 162 5 24 330 26 336 1.68e-94 285
MS.gene003285.t1 AT1G49570 46.885 305 157 3 26 327 46 348 5.70e-93 281
MS.gene003285.t1 AT4G16270 46.980 298 155 2 32 329 54 348 7.80e-92 279
MS.gene003285.t1 AT5G58390 46.462 325 162 5 8 329 1 316 4.21e-91 276
MS.gene003285.t1 AT2G35380 48.675 302 151 3 32 329 34 335 2.51e-90 274
MS.gene003285.t1 AT4G11290 41.745 321 183 3 11 329 8 326 2.92e-87 266
MS.gene003285.t1 AT5G58400 44.753 324 165 5 9 329 13 325 8.07e-86 263
MS.gene003285.t1 AT2G41480 43.827 324 169 6 11 329 13 328 2.35e-85 261
MS.gene003285.t1 AT3G03670 42.767 318 178 3 12 329 8 321 1.29e-84 259
MS.gene003285.t1 AT1G71695 45.015 331 160 7 28 355 44 355 1.95e-84 260
MS.gene003285.t1 AT3G21770 42.405 316 176 4 17 330 18 329 2.41e-84 259
MS.gene003285.t1 AT1G05260 41.265 332 187 6 1 330 1 326 2.86e-83 256
MS.gene003285.t1 AT5G15180 41.141 333 188 6 1 329 1 329 4.07e-83 256
MS.gene003285.t1 AT2G22420 40.060 332 188 4 8 339 9 329 7.66e-82 252
MS.gene003285.t1 AT2G18980 43.939 330 168 6 6 329 5 323 1.31e-81 251
MS.gene003285.t1 AT4G30170 44.156 308 161 4 26 329 25 325 2.35e-81 251
MS.gene003285.t1 AT5G64120 44.816 299 155 6 32 329 39 328 5.26e-81 250
MS.gene003285.t1 AT4G25980 43.689 309 163 5 26 329 24 326 3.55e-80 248
MS.gene003285.t1 AT3G01190 43.046 302 166 5 28 329 26 321 1.83e-79 246
MS.gene003285.t1 AT5G67400 42.724 323 178 4 11 329 10 329 7.61e-79 245
MS.gene003285.t1 AT5G14130 42.593 324 175 6 12 329 12 330 1.42e-78 244
MS.gene003285.t1 AT5G14130 42.593 324 175 6 12 329 53 371 2.50e-78 245
MS.gene003285.t1 AT4G37530 43.548 310 168 4 24 329 23 329 5.05e-78 243
MS.gene003285.t1 AT5G17820 41.824 318 170 8 13 329 10 313 5.80e-78 242
MS.gene003285.t1 AT3G49960 42.368 321 178 4 13 329 12 329 1.52e-77 241
MS.gene003285.t1 AT5G51890 41.368 307 173 5 24 329 22 322 3.78e-77 240
MS.gene003285.t1 AT5G17820 41.824 318 170 8 13 329 63 366 6.52e-77 241
MS.gene003285.t1 AT1G05240 42.434 304 161 5 32 329 30 325 2.39e-76 238
MS.gene003285.t1 AT1G05250 42.434 304 161 5 32 329 30 325 2.39e-76 238
MS.gene003285.t1 AT5G39580 44.482 299 157 6 32 329 29 319 1.82e-75 236
MS.gene003285.t1 AT4G33420 40.439 319 176 7 11 329 21 325 1.56e-74 233
MS.gene003285.t1 AT4G33420 40.439 319 176 7 11 329 68 372 5.98e-74 234
MS.gene003285.t1 AT5G42180 39.394 330 184 8 1 328 1 316 1.72e-72 228
MS.gene003285.t1 AT2G34060 41.176 306 171 6 27 326 41 343 2.66e-72 228
MS.gene003285.t1 AT4G37520 40.584 308 176 4 26 329 25 329 2.91e-71 225
MS.gene003285.t1 AT4G31760 39.062 320 184 5 13 329 15 326 1.44e-70 223
MS.gene003285.t1 AT5G64110 43.709 302 157 7 32 329 38 330 1.46e-70 223
MS.gene003285.t1 AT5G40150 39.557 316 174 5 20 329 24 328 7.80e-70 221
MS.gene003285.t1 AT4G37520 40.260 308 174 5 26 329 25 326 9.63e-70 221
MS.gene003285.t1 AT2G39040 41.667 312 171 6 25 329 43 350 1.32e-69 222
MS.gene003285.t1 AT3G28200 39.032 310 177 5 23 329 16 316 3.24e-69 219
MS.gene003285.t1 AT5G64100 41.528 301 163 7 32 329 41 331 3.80e-69 220
MS.gene003285.t1 AT2G24800 39.935 308 174 5 26 329 29 329 2.90e-68 218
MS.gene003285.t1 AT4G26010 40.836 311 162 8 23 329 17 309 3.80e-68 217
MS.gene003285.t1 AT5G24070 40.260 308 165 7 34 333 43 339 4.29e-68 218
MS.gene003285.t1 AT1G77100 40.248 323 178 7 11 329 8 319 5.01e-68 217
MS.gene003285.t1 AT4G26010 40.909 308 160 8 26 329 48 337 6.50e-68 217
MS.gene003285.t1 AT4G37530 45.736 258 135 3 24 277 23 279 1.11e-67 214
MS.gene003285.t1 AT4G33870 35.030 334 171 6 32 326 72 398 3.14e-67 217
MS.gene003285.t1 AT1G24110 38.125 320 189 6 14 329 8 322 1.64e-66 213
MS.gene003285.t1 AT2G35380 47.368 247 126 3 87 329 1 247 5.29e-66 209
MS.gene003285.t1 AT2G43480 40.728 302 160 7 36 329 45 335 5.95e-66 212
MS.gene003285.t1 AT1G30870 38.291 316 178 7 22 332 45 348 1.40e-65 211
MS.gene003285.t1 AT4G17690 38.562 306 177 5 28 330 26 323 1.65e-64 208
MS.gene003285.t1 AT5G47000 37.338 308 183 5 26 330 31 331 1.18e-62 203
MS.gene003285.t1 AT5G22410 36.308 325 185 10 12 326 10 322 5.27e-60 196
MS.gene003285.t1 AT1G34510 38.361 305 172 6 26 329 20 309 1.39e-59 194
MS.gene003285.t1 AT4G21960 36.964 303 180 4 32 331 35 329 8.39e-59 193
MS.gene003285.t1 AT3G17070 35.988 339 198 8 2 329 9 339 1.95e-56 187
MS.gene003285.t1 AT2G37130 34.951 309 189 5 25 329 27 327 8.26e-54 180
MS.gene003285.t1 AT2G37130 35.430 302 183 5 32 329 3 296 1.49e-53 179
MS.gene003285.t1 AT4G25980 42.857 217 115 4 24 235 67 279 6.10e-50 169
MS.gene003285.t1 AT3G17070 35.821 268 155 8 70 329 18 276 4.20e-41 145
MS.gene003285.t1 AT5G39580 47.368 171 85 3 32 202 29 194 2.33e-40 142
MS.gene003285.t1 AT2G24800 41.860 172 96 1 26 197 29 196 4.62e-38 136
MS.gene003285.t1 AT4G08390 26.415 265 153 10 62 313 126 361 1.57e-14 74.3
MS.gene003285.t1 AT4G08390 26.415 265 153 10 62 313 127 362 1.67e-14 74.3
MS.gene003285.t1 AT4G08390 26.415 265 153 10 62 313 127 362 1.67e-14 74.3
MS.gene003285.t1 AT4G08390 26.415 265 153 10 62 313 127 362 1.67e-14 74.3
MS.gene003285.t1 AT3G09640 25.862 232 124 8 85 312 59 246 5.30e-14 71.6
MS.gene003285.t1 AT3G09640 25.862 232 124 8 85 312 59 246 5.30e-14 71.6
MS.gene003285.t1 AT1G77490 26.336 262 155 8 62 312 106 340 6.13e-14 72.8
MS.gene003285.t1 AT1G77490 26.336 262 155 8 62 312 106 340 8.05e-14 72.8
MS.gene003285.t1 AT3G42570 31.683 101 68 1 96 195 49 149 1.94e-11 62.0

Find 65 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTCTTTGAGAGCTTTA+AGG 0.108597 2.4:-59707452 MS.gene003285:CDS
CCTCTTAGAGAATTGTTATT+TGG 0.160624 2.4:+59708273 None:intergenic
CTCCAATCTTCAAGTGAAAA+AGG 0.168173 2.4:-59707560 MS.gene003285:CDS
TAAGGCTGCAATGATTAAAA+TGG 0.175071 2.4:-59707434 MS.gene003285:CDS
GGCAATATTGGTGTGCTAAC+AGG 0.250866 2.4:-59707412 MS.gene003285:CDS
TATGTGGTGTGTTGTGCTTT+TGG 0.321585 2.4:-59709853 MS.gene003285:CDS
TCCGGCTCCATTCAATTCCT+TGG 0.334088 2.4:-59707936 MS.gene003285:CDS
ATTTCAGGTGCTCATACATT+TGG 0.340486 2.4:-59707766 MS.gene003285:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2.4:+59707586 None:intergenic
TAACAATTCTCTAAGAGGTT+TGG 0.350241 2.4:-59708268 MS.gene003285:CDS
CCAAATAACAATTCTCTAAG+AGG 0.353113 2.4:-59708273 MS.gene003285:CDS
AGTTGTGCATCTGAGGAAAA+AGG 0.355870 2.4:+59709813 None:intergenic
AGGAGTCGTTGGATCGAAAT+TGG 0.358608 2.4:+59707606 None:intergenic
TGCTCAAGCATCCTCTGTTC+TGG 0.373097 2.4:-59708166 MS.gene003285:intron
ATGATTAAAATGGGCAATAT+TGG 0.376995 2.4:-59707424 MS.gene003285:CDS
ATCCTCTAATGATTCTACTA+TGG 0.377320 2.4:+59707312 None:intergenic
CCTAGTTGGACAGTTCCTTT+AGG 0.383887 2.4:-59708007 MS.gene003285:CDS
ATCCATAGTAGAATCATTAG+AGG 0.411122 2.4:-59707314 MS.gene003285:CDS
AAGAGTTGGATCGGGACTTC+CGG 0.417193 2.4:+59707693 None:intergenic
GCTCATTGCGCACAATTTGT+TGG 0.422197 2.4:-59707739 MS.gene003285:CDS
AGTTGATCCAAGGAATTGAA+TGG 0.434442 2.4:+59707929 None:intergenic
GAATTTGTTGACAATGCTAA+TGG 0.451627 2.4:+59707489 None:intergenic
AAGGCTGCAATGATTAAAAT+GGG 0.452725 2.4:-59707433 MS.gene003285:CDS
GGACAGTTCCTTTAGGAAGA+AGG 0.457817 2.4:-59708000 MS.gene003285:CDS
TACTGATCTAGTTGCACTCT+CGG 0.466976 2.4:-59707873 MS.gene003285:CDS
CAAGAATTATTCTCAACATC+AGG 0.473757 2.4:-59707520 MS.gene003285:CDS
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.4:+59708204 None:intergenic
AAACCATCCCTTCTTCCTAA+AGG 0.477418 2.4:+59707992 None:intergenic
AAGTAAGTTGTGTTAAGAGT+TGG 0.480928 2.4:+59707679 None:intergenic
GCATGCTTGCTAGTCTCGTC+AGG 0.492600 2.4:-59709704 MS.gene003285:CDS
ACTTGCAAATCAAAATCTTC+CGG 0.502470 2.4:-59707954 MS.gene003285:CDS
TTCGTGCCAGGTCCACCATT+GGG 0.506163 2.4:+59707634 None:intergenic
GGTGTGCTAACAGGGACAAA+AGG 0.508960 2.4:-59707403 MS.gene003285:CDS
AGTTGTGTTAAGAGTTGGAT+CGG 0.517053 2.4:+59707684 None:intergenic
TCAAATTTATCAGGAGTCGT+TGG 0.517441 2.4:+59707595 None:intergenic
TCCAAGGAATTGAATGGAGC+CGG 0.518137 2.4:+59707935 None:intergenic
TACAGGCACAAGGTCCTAGT+TGG 0.519137 2.4:-59708021 MS.gene003285:intron
GACAGTTCCTTTAGGAAGAA+GGG 0.519926 2.4:-59707999 MS.gene003285:CDS
TTGTACAACTTCAGCAGTAC+CGG 0.523950 2.4:-59707712 MS.gene003285:CDS
GCAATATTGGTGTGCTAACA+GGG 0.525835 2.4:-59707411 MS.gene003285:CDS
CCTAAAGGAACTGTCCAACT+AGG 0.526146 2.4:+59708007 None:intergenic
TGATTCTACTATGGATGCTA+TGG 0.530449 2.4:+59707321 None:intergenic
AAAGCTGCATTTGCTGCTCA+AGG 0.531000 2.4:-59707905 MS.gene003285:CDS
ATATGTCCCAATGGTGGACC+TGG 0.533119 2.4:-59707640 MS.gene003285:CDS
TGTTAAGACATTGCTAACAA+TGG 0.542625 2.4:+59709749 None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG 0.546841 2.4:+59707633 None:intergenic
TGCAGCTTTAAGTTGATCCA+AGG 0.550246 2.4:+59707919 None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG 0.555195 2.4:+59707685 None:intergenic
ACTGATCTAGTTGCACTCTC+GGG 0.569804 2.4:-59707872 MS.gene003285:intron
CTAACAATGGAACTAACAGT+TGG 0.570134 2.4:+59709762 None:intergenic
TCGTTGGATCGAAATTGGTA+AGG 0.570774 2.4:+59707611 None:intergenic
CAACTAGATCAGTAGTATTG+AGG 0.571363 2.4:+59707882 None:intergenic
GGGACTAAGTTGTGCATCTG+AGG 0.581590 2.4:+59709806 None:intergenic
TTCTACTATGGATGCTATGG+TGG 0.582608 2.4:+59707324 None:intergenic
AAATTGGTAAGGTTCGTGCC+AGG 0.584556 2.4:+59707622 None:intergenic
GTTCCTTTAGGAAGAAGGGA+TGG 0.594643 2.4:-59707995 MS.gene003285:CDS
CGCACAATATGTCCCAATGG+TGG 0.600150 2.4:-59707646 MS.gene003285:CDS
ACACCACATAGAAGTTGCTA+AGG 0.602167 2.4:+59709866 None:intergenic
ATAGTAGAATCATTAGAGGA+TGG 0.616700 2.4:-59707310 MS.gene003285:CDS
ACTCCTTAGCAACTTCTATG+TGG 0.626841 2.4:-59709869 MS.gene003285:CDS
TTGCGCACAATATGTCCCAA+TGG 0.640051 2.4:-59707649 MS.gene003285:CDS
ACGAGACTAGCAAGCATGCG+AGG 0.661835 2.4:+59709708 None:intergenic
AGTATTGTTCAGCAAAACTG+AGG 0.702311 2.4:+59708326 None:intergenic
TAGGGCATATACCAGAACAG+AGG 0.720428 2.4:+59708155 None:intergenic
GATGAAATAATACAGGCACA+AGG 0.736966 2.4:-59708031 MS.gene003285:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATTATAATATAATA+TGG - chr2.4:59707589-59707608 MS.gene003285:CDS 0.0%
!!! AATTTTTCGAAAAAAAAAAT+AGG - chr2.4:59707997-59708016 MS.gene003285:CDS 10.0%
!!! ATTTTTCGAAAAAAAAAATA+GGG - chr2.4:59707998-59708017 MS.gene003285:CDS 10.0%
!! ATATATTACACAACTAAAAA+TGG - chr2.4:59707652-59707671 MS.gene003285:CDS 15.0%
!! TTTAGTTGTGTAATATATAT+AGG + chr2.4:59707650-59707669 None:intergenic 15.0%
!!! ACAGAAATATTTTTAGAATT+AGG + chr2.4:59709031-59709050 None:intergenic 15.0%
!!! CAGAAATATTTTTAGAATTA+GGG + chr2.4:59709030-59709049 None:intergenic 15.0%
!!! CTTGTAAAAAAAAAATTTTC+CGG - chr2.4:59708281-59708300 MS.gene003285:CDS 15.0%
!!! GGAAAATTTTTTTTTTACAA+GGG + chr2.4:59708282-59708301 None:intergenic 15.0%
!!! TTATCTCATCTTTTATTTTA+GGG - chr2.4:59708180-59708199 MS.gene003285:CDS 15.0%
!! AATTGTTCGAAGAAAAAAAT+AGG - chr2.4:59708635-59708654 MS.gene003285:intron 20.0%
!! ATTGTTCGAAGAAAAAAATA+GGG - chr2.4:59708636-59708655 MS.gene003285:intron 20.0%
!! TAATTTAATACAACATCACA+AGG - chr2.4:59709050-59709069 MS.gene003285:intron 20.0%
!! TAGTATTGTCTAAAAATTGA+AGG - chr2.4:59708077-59708096 MS.gene003285:intron 20.0%
!! TTGAATTCCTAAAAAATAGA+AGG - chr2.4:59708440-59708459 MS.gene003285:intron 20.0%
!!! ATCCTTCTATTTTTAGTAAA+TGG + chr2.4:59707799-59707818 None:intergenic 20.0%
!!! CGGAAAATTTTTTTTTTACA+AGG + chr2.4:59708283-59708302 None:intergenic 20.0%
!!! CTTATCTCATCTTTTATTTT+AGG - chr2.4:59708179-59708198 MS.gene003285:CDS 20.0%
!!! TCCTTCTATTTTTAGTAAAT+GGG + chr2.4:59707798-59707817 None:intergenic 20.0%
!!! TTCTAATCCTTCTATTTTTT+AGG + chr2.4:59708450-59708469 None:intergenic 20.0%
!!! TTTTTTAAAAAAATCTGACC+TGG + chr2.4:59708414-59708433 None:intergenic 20.0%
! AAAAGACAAGTAATGTCAAA+AGG + chr2.4:59707753-59707772 None:intergenic 25.0%
! AAATAGAAGGATTAGAACAA+AGG - chr2.4:59707807-59707826 MS.gene003285:intron 25.0%
! ACGTGTAAAAAAAAAATTCC+AGG - chr2.4:59708393-59708412 MS.gene003285:intron 25.0%
! ATGATTAAAATGGGCAATAT+TGG - chr2.4:59709740-59709759 MS.gene003285:CDS 25.0%
! CGCATAAATTATAGAACATA+TGG + chr2.4:59708776-59708795 None:intergenic 25.0%
! TACCTATGATGAAATAATAC+AGG - chr2.4:59709126-59709145 MS.gene003285:intron 25.0%
! TAGTTCTTGTCAAATTTATC+AGG + chr2.4:59709581-59709600 None:intergenic 25.0%
! TCCCATTTACTAAAAATAGA+AGG - chr2.4:59707794-59707813 MS.gene003285:intron 25.0%
! TGATATGTTGTTGATACAAA+AGG - chr2.4:59707912-59707931 MS.gene003285:CDS 25.0%
! TTTACTGAACTAGTAAAGTT+AGG - chr2.4:59708141-59708160 MS.gene003285:intron 25.0%
!! AAAGTTGATTCATATACACT+TGG + chr2.4:59708103-59708122 None:intergenic 25.0%
!! ATGTGATCTATAATTTTCAC+AGG - chr2.4:59708806-59708825 MS.gene003285:intron 25.0%
!! GTTAGCAGTAACTTTTTAAT+AGG - chr2.4:59708726-59708745 MS.gene003285:intron 25.0%
!! TGTGATCTATAATTTTCACA+GGG - chr2.4:59708807-59708826 MS.gene003285:intron 25.0%
!! TTTAGTAGTAGAATGGTTTT+AGG + chr2.4:59708504-59708523 None:intergenic 25.0%
!!! TCTAATTTGACGTCTTTTTT+AGG + chr2.4:59707715-59707734 None:intergenic 25.0%
!!! TGGAATTTTTTTTTTACACG+TGG + chr2.4:59708394-59708413 None:intergenic 25.0%
AAGGCTGCAATGATTAAAAT+GGG - chr2.4:59709731-59709750 MS.gene003285:CDS 30.0%
AAGTAAGTTGTGTTAAGAGT+TGG + chr2.4:59709488-59709507 None:intergenic 30.0%
ACTTGCAAATCAAAATCTTC+CGG - chr2.4:59709210-59709229 MS.gene003285:intron 30.0%
ATAGTAGAATCATTAGAGGA+TGG - chr2.4:59709854-59709873 MS.gene003285:CDS 30.0%
ATCCATAGTAGAATCATTAG+AGG - chr2.4:59709850-59709869 MS.gene003285:CDS 30.0%
ATCCTCTAATGATTCTACTA+TGG + chr2.4:59709855-59709874 None:intergenic 30.0%
CAAGAATTATTCTCAACATC+AGG - chr2.4:59709644-59709663 MS.gene003285:intron 30.0%
CCAAATAACAATTCTCTAAG+AGG - chr2.4:59708891-59708910 MS.gene003285:intron 30.0%
CCTATAATATAGGTCATTTC+CGG - chr2.4:59708221-59708240 MS.gene003285:CDS 30.0%
CGGAAATGACCTATATTATA+GGG + chr2.4:59708223-59708242 None:intergenic 30.0%
GGAAATGACCTATATTATAG+GGG + chr2.4:59708222-59708241 None:intergenic 30.0%
TAAGGCTGCAATGATTAAAA+TGG - chr2.4:59709730-59709749 MS.gene003285:CDS 30.0%
TATGTATGTTTCTCGATTTC+AGG - chr2.4:59709383-59709402 MS.gene003285:intron 30.0%
TCCAATCTTCAAGTGAAAAA+GGG - chr2.4:59709605-59709624 MS.gene003285:intron 30.0%
TCTTTGAATACAACATCACA+AGG - chr2.4:59709085-59709104 MS.gene003285:intron 30.0%
TGCCTGTATTATTTCATCAT+AGG + chr2.4:59709131-59709150 None:intergenic 30.0%
TGTTAAGACATTGCTAACAA+TGG + chr2.4:59707418-59707437 None:intergenic 30.0%
TTCTCTCTTTAGTAGTAGAA+TGG + chr2.4:59708511-59708530 None:intergenic 30.0%
! AATCAAACCGGAATTTTTAC+AGG + chr2.4:59708255-59708274 None:intergenic 30.0%
! ATCAAACCGGAATTTTTACA+GGG + chr2.4:59708254-59708273 None:intergenic 30.0%
! CCTCTTAGAGAATTGTTATT+TGG + chr2.4:59708894-59708913 None:intergenic 30.0%
! GTTTTTCACCCCTATAATAT+AGG - chr2.4:59708211-59708230 MS.gene003285:CDS 30.0%
! TAACAATTCTCTAAGAGGTT+TGG - chr2.4:59708896-59708915 MS.gene003285:intron 30.0%
! TTTAGTGGTAGAATGGTTTT+AGG + chr2.4:59707858-59707877 None:intergenic 30.0%
!! ACAAGTTTTGCTGTAAAAAG+TGG + chr2.4:59707382-59707401 None:intergenic 30.0%
!! CAAGTTTTGCTGTAAAAAGT+GGG + chr2.4:59707381-59707400 None:intergenic 30.0%
!! GAATTTGTTGACAATGCTAA+TGG + chr2.4:59709678-59709697 None:intergenic 30.0%
!! GTACTTCTCTTACTTTTCTT+AGG + chr2.4:59707970-59707989 None:intergenic 30.0%
!!! GATTTTGATTTGCAAGTGTT+CGG + chr2.4:59709207-59709226 None:intergenic 30.0%
AGTATTGTTCAGCAAAACTG+AGG + chr2.4:59708841-59708860 None:intergenic 35.0%
AGTTGATCCAAGGAATTGAA+TGG + chr2.4:59709238-59709257 None:intergenic 35.0%
AGTTGTGTTAAGAGTTGGAT+CGG + chr2.4:59709483-59709502 None:intergenic 35.0%
ATATATATAGGAGTTGCGCA+TGG + chr2.4:59707638-59707657 None:intergenic 35.0%
ATTCTACCACTAAAGAGAGA+AGG - chr2.4:59707864-59707883 MS.gene003285:intron 35.0%
CAACTAGATCAGTAGTATTG+AGG + chr2.4:59709285-59709304 None:intergenic 35.0%
CCAATCTTCAAGTGAAAAAG+GGG - chr2.4:59709606-59709625 MS.gene003285:intron 35.0%
CCGGAAATGACCTATATTAT+AGG + chr2.4:59708224-59708243 None:intergenic 35.0%
CTAACAATGGAACTAACAGT+TGG + chr2.4:59707405-59707424 None:intergenic 35.0%
CTCCAATCTTCAAGTGAAAA+AGG - chr2.4:59709604-59709623 MS.gene003285:intron 35.0%
GATGAAATAATACAGGCACA+AGG - chr2.4:59709133-59709152 MS.gene003285:intron 35.0%
TCAAATTTATCAGGAGTCGT+TGG + chr2.4:59709572-59709591 None:intergenic 35.0%
TGATTCTACTATGGATGCTA+TGG + chr2.4:59709846-59709865 None:intergenic 35.0%
TTCTCTCTTTAGTGGTAGAA+TGG + chr2.4:59707865-59707884 None:intergenic 35.0%
TTTGTTCCTTCTCTCTTTAG+TGG + chr2.4:59707873-59707892 None:intergenic 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.4:59709398-59709417 MS.gene003285:intron 35.0%
! TACAAGGGCATAAATCAAAC+CGG + chr2.4:59708267-59708286 None:intergenic 35.0%
! TCAAACCGGAATTTTTACAG+GGG + chr2.4:59708253-59708272 None:intergenic 35.0%
!! CTTTCATGACTGTTTTGTTC+TGG - chr2.4:59707488-59707507 MS.gene003285:CDS 35.0%
!!! CTCAAAGAAAGCGTTTTGAT+CGG + chr2.4:59709705-59709724 None:intergenic 35.0%
AAACCATCCCTTCTTCCTAA+AGG + chr2.4:59709175-59709194 None:intergenic 40.0%
ACACCACATAGAAGTTGCTA+AGG + chr2.4:59707301-59707320 None:intergenic 40.0%
ACTCCTTAGCAACTTCTATG+TGG - chr2.4:59707295-59707314 MS.gene003285:CDS 40.0%
AGTTGTGCATCTGAGGAAAA+AGG + chr2.4:59707354-59707373 None:intergenic 40.0%
GCAATATTGGTGTGCTAACA+GGG - chr2.4:59709753-59709772 MS.gene003285:CDS 40.0%
GTTGTGTTAAGAGTTGGATC+GGG + chr2.4:59709482-59709501 None:intergenic 40.0%
TACTGATCTAGTTGCACTCT+CGG - chr2.4:59709291-59709310 MS.gene003285:intron 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.4:59708963-59708982 None:intergenic 40.0%
TCGTTGGATCGAAATTGGTA+AGG + chr2.4:59709556-59709575 None:intergenic 40.0%
TTCTACTATGGATGCTATGG+TGG + chr2.4:59709843-59709862 None:intergenic 40.0%
TTGTACAACTTCAGCAGTAC+CGG - chr2.4:59709452-59709471 MS.gene003285:intron 40.0%
TTTCGCCCCTGTAAAAATTC+CGG - chr2.4:59708245-59708264 MS.gene003285:CDS 40.0%
! ATTTTTACAGGGGCGAAAAC+CGG + chr2.4:59708243-59708262 None:intergenic 40.0%
! CGCTTTCTTTGAGAGCTTTA+AGG - chr2.4:59709712-59709731 MS.gene003285:CDS 40.0%
! GACAGTTCCTTTAGGAAGAA+GGG - chr2.4:59709165-59709184 MS.gene003285:intron 40.0%
! TATGTGGTGTGTTGTGCTTT+TGG - chr2.4:59707311-59707330 MS.gene003285:CDS 40.0%
!! CCCCTTTTTCACTTGAAGAT+TGG + chr2.4:59709609-59709628 None:intergenic 40.0%
!! TGCAGCTTTAAGTTGATCCA+AGG + chr2.4:59709248-59709267 None:intergenic 40.0%
AAATTGGTAAGGTTCGTGCC+AGG + chr2.4:59709545-59709564 None:intergenic 45.0%
ACTGATCTAGTTGCACTCTC+GGG - chr2.4:59709292-59709311 MS.gene003285:intron 45.0%
AGCAGTCAACTAAAGACGTG+TGG + chr2.4:59707526-59707545 None:intergenic 45.0%
AGGAGTCGTTGGATCGAAAT+TGG + chr2.4:59709561-59709580 None:intergenic 45.0%
CCTAAAGGAACTGTCCAACT+AGG + chr2.4:59709160-59709179 None:intergenic 45.0%
CCTAGTTGGACAGTTCCTTT+AGG - chr2.4:59709157-59709176 MS.gene003285:intron 45.0%
GCTCATTGCGCACAATTTGT+TGG - chr2.4:59709425-59709444 MS.gene003285:intron 45.0%
GGCAATATTGGTGTGCTAAC+AGG - chr2.4:59709752-59709771 MS.gene003285:CDS 45.0%
TAGGGCATATACCAGAACAG+AGG + chr2.4:59709012-59709031 None:intergenic 45.0%
TCCAAGGAATTGAATGGAGC+CGG + chr2.4:59709232-59709251 None:intergenic 45.0%
TTGCGCACAATATGTCCCAA+TGG - chr2.4:59709515-59709534 MS.gene003285:intron 45.0%
! AAAGCTGCATTTGCTGCTCA+AGG - chr2.4:59709259-59709278 MS.gene003285:intron 45.0%
! GGACAGTTCCTTTAGGAAGA+AGG - chr2.4:59709164-59709183 MS.gene003285:intron 45.0%
! GTTCCTTTAGGAAGAAGGGA+TGG - chr2.4:59709169-59709188 MS.gene003285:intron 45.0%
!! GTTGTGCTTTTGGTTGTGCT+TGG - chr2.4:59707321-59707340 MS.gene003285:CDS 45.0%
AAGAGTTGGATCGGGACTTC+CGG + chr2.4:59709474-59709493 None:intergenic 50.0%
ACTCAGCAGATTCGCTTACG+TGG - chr2.4:59708325-59708344 MS.gene003285:CDS 50.0%
CGCACAATATGTCCCAATGG+TGG - chr2.4:59709518-59709537 MS.gene003285:intron 50.0%
CGTAAGCGAATCTGCTGAGT+TGG + chr2.4:59708325-59708344 None:intergenic 50.0%
GGGACTAAGTTGTGCATCTG+AGG + chr2.4:59707361-59707380 None:intergenic 50.0%
GGTGTGCTAACAGGGACAAA+AGG - chr2.4:59709761-59709780 MS.gene003285:CDS 50.0%
TACAGGCACAAGGTCCTAGT+TGG - chr2.4:59709143-59709162 MS.gene003285:intron 50.0%
TCCGGCTCCATTCAATTCCT+TGG - chr2.4:59709228-59709247 MS.gene003285:intron 50.0%
TGCTCAAGCATCCTCTGTTC+TGG - chr2.4:59708998-59709017 MS.gene003285:intron 50.0%
! AAGCGAATCTGCTGAGTTGG+AGG + chr2.4:59708322-59708341 None:intergenic 50.0%
! AGCGAATCTGCTGAGTTGGA+GGG + chr2.4:59708321-59708340 None:intergenic 50.0%
!! ATATGTCCCAATGGTGGACC+TGG - chr2.4:59709524-59709543 MS.gene003285:intron 50.0%
!! GTGCTTTTGGTTGTGCTTGG+AGG - chr2.4:59707324-59707343 MS.gene003285:CDS 50.0%
ACGAGACTAGCAAGCATGCG+AGG + chr2.4:59707459-59707478 None:intergenic 55.0%
TTCGTGCCAGGTCCACCATT+GGG + chr2.4:59709533-59709552 None:intergenic 55.0%
! CGAATCTGCTGAGTTGGAGG+GGG + chr2.4:59708319-59708338 None:intergenic 55.0%
! GAATCTGCTGAGTTGGAGGG+GGG + chr2.4:59708318-59708337 None:intergenic 55.0%
! GCATGCTTGCTAGTCTCGTC+AGG - chr2.4:59707460-59707479 MS.gene003285:CDS 55.0%
! GCGAATCTGCTGAGTTGGAG+GGG + chr2.4:59708320-59708339 None:intergenic 55.0%
GTTCGTGCCAGGTCCACCAT+TGG + chr2.4:59709534-59709553 None:intergenic 60.0%
! CTGCTGAGTTGGAGGGGGGA+GGG + chr2.4:59708314-59708333 None:intergenic 65.0%
! TCTGCTGAGTTGGAGGGGGG+AGG + chr2.4:59708315-59708334 None:intergenic 65.0%
! TGCTGAGTTGGAGGGGGGAG+GGG + chr2.4:59708313-59708332 None:intergenic 65.0%
!!! GAGGGGGGAGGGGTGTTTTC+CGG + chr2.4:59708303-59708322 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 59707291 59709895 59707291 ID=MS.gene003285
chr2.4 mRNA 59707291 59709895 59707291 ID=MS.gene003285.t1;Parent=MS.gene003285
chr2.4 exon 59709677 59709895 59709677 ID=MS.gene003285.t1.exon1;Parent=MS.gene003285.t1
chr2.4 CDS 59709677 59709895 59709677 ID=cds.MS.gene003285.t1;Parent=MS.gene003285.t1
chr2.4 exon 59708167 59708358 59708167 ID=MS.gene003285.t1.exon2;Parent=MS.gene003285.t1
chr2.4 CDS 59708167 59708358 59708167 ID=cds.MS.gene003285.t1;Parent=MS.gene003285.t1
chr2.4 exon 59707873 59708038 59707873 ID=MS.gene003285.t1.exon3;Parent=MS.gene003285.t1
chr2.4 CDS 59707873 59708038 59707873 ID=cds.MS.gene003285.t1;Parent=MS.gene003285.t1
chr2.4 exon 59707291 59707781 59707291 ID=MS.gene003285.t1.exon4;Parent=MS.gene003285.t1
chr2.4 CDS 59707291 59707781 59707291 ID=cds.MS.gene003285.t1;Parent=MS.gene003285.t1
Gene Sequence

>MS.gene003285

ATGAACTCCTTAGCAACTTCTATGTGGTGTGTTGTGCTTTTGGTTGTGCTTGGAGGACTACCTTTTTCCTCAGATGCACAACTTAGTCCCACTTTTTACAGCAAAACTTGTCCAACTGTTAGTTCCATTGTTAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCTCGCATGCTTGCTAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCTGGTAATTTATGTATCCACACGTCTTTAGTTGACTGCTTTATATTTCTAATATTATCTTTAGATTTATAACTATTAGTTTAAAATATATTATAATATAATATGGTAAAATAATATAGTTAGTTCGATCCATGCGCAACTCCTATATATATTACACAACTAAAAATGGTAAATAATCGTCTACTACAACTAATCAACATACGTTTCCTAAAAAAGACGTCAAATTAGATCTATCTTCATTCATCCTTTTGACATTACTTGTCTTTTGATCGAACTTTTATTAAAATGTCCCATTTACTAAAAATAGAAGGATTAGAACAAAGGAAAAAACAGAAAAATAATTCTTACACCTAAAACCATTCTACCACTAAAGAGAGAAGGAACAAATTGAATTAAATGATATATGTGATATGTTGTTGATACAAAAGGAAGAGAGATAAAGAGAAAACATGTAAAATGTGCCTAAGAAAAGTAAGAGAAGTACAAAATATAATTTTTCGAAAAAAAAAATAGGGTTGTATTAATCATCTTGCACTTCTTTTTGTTTTATTTTATAAAATTATGCATTAACTAGTATTGTCTAAAAATTGAAGGCCAAGTGTATATGAATCAACTTTCTTATTAGTAAAGTTTTTTTTACTGAACTAGTAAAGTTAGGTTTAACAAAAAACGACTTATCTCATCTTTTATTTTAGGGTTAATAGTGTTTTTCACCCCTATAATATAGGTCATTTCCGGTTTTCGCCCCTGTAAAAATTCCGGTTTGATTTATGCCCTTGTAAAAAAAAAATTTTCCGGAAAACACCCCTCCCCCCTCCAACTCAGCAGATTCGCTTACGTGGCGCTGACTTGACTTTTTTTTTTCATTTTTTATTTTTTTTAATGCCACGTGTAAAAAAAAAATTCCAGGTCAGATTTTTTTAAAAAAATTATTTTGAATTCCTAAAAAATAGAAGGATTAGAACAAAGGAAAAAATAGAAAAATAATTCTTACACCTAAAACCATTCTACTACTAAAGAGAGAAGAAATAAATTGAATTGAATGATATATGTGATATGCTGTTGATACAAGAGATAAAGAGAAAATAAAATATAAAATGTGCGTAAGAAAAGTAAGAAGTACAAAGATAATTGTTCGAAGAAAAAAATAGGGTTGTATTAATTGTCTTGCACTTCTTTTTGTTTAATTATATAAAATTATACATTTAACTAGTTTTTATGTTAGCAGTAACTTTTTAATAGGTTTTTTATATAACAATATTATTTACCATATGTTCTATAATTTATGCGTCAAAAAATAATGTGATCTATAATTTTCACAGGGATGTGATGCCTCAGTTTTGCTGAACAATACTGCTACAATCGTAAGCGAACAACAAGCTTTTCCAAATAACAATTCTCTAAGAGGTTTGGATGTTGTGAATCAGATCAAAAATGCTGTAGAAAGTGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTCAAGCATCCTCTGTTCTGGTATATGCCCTAATTCTAAAAATATTTCTGTAATTTAATACAACATCACAAGGCTAAGTGTAACATCTTTGAATACAACATCACAAGGCTAAGTGTAACATCATTTTACCTATGATGAAATAATACAGGCACAAGGTCCTAGTTGGACAGTTCCTTTAGGAAGAAGGGATGGTTTAACTGCAAACCGAACACTTGCAAATCAAAATCTTCCGGCTCCATTCAATTCCTTGGATCAACTTAAAGCTGCATTTGCTGCTCAAGGCCTCAATACTACTGATCTAGTTGCACTCTCGGGTATGTGCTTTTTTTAGCGATGATATTGACGTTATATAAACGTAAAAATTATATATATGATTATTGATTTATGTATGTTTCTCGATTTCAGGTGCTCATACATTTGGAAGAGCTCATTGCGCACAATTTGTTGGTCGATTGTACAACTTCAGCAGTACCGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTGAAAAAGGGGTTGCTTCAAAGTGATCAAGAATTATTCTCAACATCAGGTGCAGATACCATTAGCATTGTCAACAAATTCAGCACCGATCAAAACGCTTTCTTTGAGAGCTTTAAGGCTGCAATGATTAAAATGGGCAATATTGGTGTGCTAACAGGGACAAAAGGAGAGATTAGAAAACAATGCAACTTTGTGAACTCAAATTCTGCAGAACTAGATTTAGCCACCATAGCATCCATAGTAGAATCATTAGAGGATGGTATTGCTAGTGTAATATAA
Protein sequence

>MS.gene003285.t1

MNSLATSMWCVVLLVVLGGLPFSSDAQLSPTFYSKTCPTVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVLGCDASVLLNNTATIVSEQQAFPNNNSLRGLDVVNQIKNAVESACPNTVSCADILALAAQASSVLAQGPSWTVPLGRRDGLTANRTLANQNLPAPFNSLDQLKAAFAAQGLNTTDLVALSGAHTFGRAHCAQFVGRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSTDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSNSAELDLATIASIVESLEDGIASVI