AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003289

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003289.t1 MTR_2g029910 94.334 353 20 0 1 353 1 353 0.0 677
MS.gene003289.t1 MTR_2g029850 75.214 351 85 2 4 353 3 352 0.0 520
MS.gene003289.t1 MTR_2g029860 74.000 350 86 4 7 353 6 353 0.0 504
MS.gene003289.t1 MTR_2g029820 68.079 354 108 2 4 353 3 355 8.70e-177 494
MS.gene003289.t1 MTR_2g029800 67.806 351 110 2 4 352 3 352 1.90e-173 486
MS.gene003289.t1 MTR_2g029815 66.570 344 113 2 11 353 10 352 1.46e-165 466
MS.gene003289.t1 MTR_2g029830 68.263 334 100 3 23 351 21 353 6.01e-160 452
MS.gene003289.t1 MTR_2g029740 63.842 354 123 2 3 352 2 354 6.15e-160 452
MS.gene003289.t1 MTR_2g029750 63.842 354 122 3 4 353 3 354 7.06e-158 447
MS.gene003289.t1 MTR_2g028980 62.429 354 128 2 3 352 2 354 1.68e-154 438
MS.gene003289.t1 MTR_2g029560 62.059 340 121 3 14 353 13 344 3.59e-147 419
MS.gene003289.t1 MTR_2g029730 60.350 343 128 3 11 353 11 345 3.46e-141 404
MS.gene003289.t1 MTR_2g029830 67.376 282 86 3 75 351 5 285 4.13e-129 371
MS.gene003289.t1 MTR_7g093370 58.766 308 125 2 26 332 65 371 7.59e-120 351
MS.gene003289.t1 MTR_1g054205 58.065 310 128 2 24 332 18 326 6.48e-118 344
MS.gene003289.t1 MTR_2g029880 72.897 214 47 2 140 353 7 209 3.19e-103 303
MS.gene003289.t1 MTR_8g076820 50.329 304 149 2 30 333 30 331 5.21e-103 306
MS.gene003289.t1 MTR_5g021060 49.505 303 151 2 30 332 30 330 3.56e-99 296
MS.gene003289.t1 MTR_4g125940 48.071 337 164 5 1 333 1 330 7.98e-98 293
MS.gene003289.t1 MTR_5g017860 48.039 306 154 3 28 332 25 326 8.82e-97 290
MS.gene003289.t1 MTR_1g022970 49.505 303 152 1 30 332 46 347 1.21e-96 291
MS.gene003289.t1 MTR_2g084090 48.701 308 149 2 25 332 20 318 1.36e-96 290
MS.gene003289.t1 MTR_5g017850 48.039 306 154 3 28 332 25 326 4.80e-96 288
MS.gene003289.t1 MTR_4g029170 47.962 319 154 5 16 332 13 321 8.57e-94 283
MS.gene003289.t1 MTR_3g094650 47.222 324 157 4 6 328 8 318 1.29e-93 282
MS.gene003289.t1 MTR_2g084080 46.154 325 165 3 8 332 3 317 8.49e-93 280
MS.gene003289.t1 MTR_7g072510 47.386 306 151 3 27 332 17 312 1.02e-92 280
MS.gene003289.t1 MTR_4g083710 49.026 308 148 4 27 332 24 324 2.56e-92 279
MS.gene003289.t1 MTR_4g029180 50.662 302 137 5 33 332 30 321 4.71e-92 278
MS.gene003289.t1 MTR_3g466200 46.914 324 157 5 11 332 10 320 5.86e-92 278
MS.gene003289.t1 MTR_2g084110 48.701 308 148 4 25 332 20 317 7.53e-92 277
MS.gene003289.t1 MTR_3g072190 47.557 307 151 3 26 332 22 318 8.49e-92 277
MS.gene003289.t1 MTR_2g040000 47.727 308 155 3 29 333 28 332 2.74e-91 276
MS.gene003289.t1 MTR_2g084020 45.846 325 167 3 8 332 3 318 6.75e-91 275
MS.gene003289.t1 MTR_2g084010 46.154 325 166 3 8 332 3 318 2.09e-90 274
MS.gene003289.t1 MTR_2g084000 46.732 306 154 3 27 332 23 319 5.85e-90 273
MS.gene003289.t1 MTR_5g014100 47.039 304 156 3 33 332 29 331 1.45e-89 272
MS.gene003289.t1 MTR_4g122640 45.875 303 160 3 30 332 38 336 1.51e-89 272
MS.gene003289.t1 MTR_7g072480 48.525 305 147 3 28 332 22 316 3.29e-89 271
MS.gene003289.t1 MTR_5g049280 43.770 313 172 4 24 333 27 338 1.69e-88 270
MS.gene003289.t1 MTR_3g094670 45.988 324 161 4 6 328 8 318 7.37e-88 267
MS.gene003289.t1 MTR_4g125940 51.986 277 128 3 59 333 2 275 1.20e-87 265
MS.gene003289.t1 MTR_4g029200 46.129 310 157 3 23 332 39 338 5.99e-87 266
MS.gene003289.t1 MTR_3g094630 46.341 328 162 4 6 332 8 322 7.59e-87 265
MS.gene003289.t1 MTR_5g074970 46.296 324 162 5 12 332 12 326 8.51e-87 265
MS.gene003289.t1 MTR_5g074760 45.373 335 166 6 1 332 1 321 1.14e-85 262
MS.gene003289.t1 MTR_5g074740 46.774 310 153 5 28 334 23 323 3.16e-85 261
MS.gene003289.t1 MTR_4g074995 46.429 308 143 5 27 332 21 308 8.42e-85 259
MS.gene003289.t1 MTR_5g083860 42.342 333 174 5 5 332 6 325 2.49e-84 258
MS.gene003289.t1 MTR_3g467600 47.742 310 151 5 26 332 23 324 4.63e-84 258
MS.gene003289.t1 MTR_4g029190 46.602 309 152 6 27 332 42 340 4.66e-84 258
MS.gene003289.t1 MTR_4g030890 45.307 309 161 5 25 332 95 396 2.04e-83 259
MS.gene003289.t1 MTR_3g466180 43.987 316 167 3 17 332 18 323 1.77e-82 254
MS.gene003289.t1 MTR_5g074860 45.679 324 164 6 12 332 11 325 5.14e-82 253
MS.gene003289.t1 MTR_5g074710 46.302 311 153 6 28 334 23 323 5.63e-82 252
MS.gene003289.t1 MTR_4g031140 43.506 308 166 5 26 332 24 324 8.65e-82 253
MS.gene003289.t1 MTR_2g088770 43.887 319 172 6 16 332 12 325 1.66e-80 249
MS.gene003289.t1 MTR_4g046713 43.478 322 173 6 12 332 13 326 2.94e-80 248
MS.gene003289.t1 MTR_1g115900 42.679 321 172 6 14 332 11 321 2.26e-78 243
MS.gene003289.t1 MTR_4g074990 43.413 334 154 7 1 332 5 305 7.75e-78 241
MS.gene003289.t1 MTR_4g133800 43.377 302 157 7 35 334 46 335 4.12e-76 238
MS.gene003289.t1 MTR_3g092990 39.634 328 191 4 7 333 6 327 8.29e-76 237
MS.gene003289.t1 MTR_3g072190 48.077 260 125 3 73 332 2 251 2.49e-75 233
MS.gene003289.t1 MTR_1g101830 43.689 309 163 7 26 332 23 322 6.32e-75 234
MS.gene003289.t1 MTR_2g008710 43.189 301 163 5 34 332 31 325 1.31e-74 234
MS.gene003289.t1 MTR_7g107520 41.745 321 180 5 12 332 7 320 2.50e-74 233
MS.gene003289.t1 MTR_4g114210 40.810 321 177 7 17 332 8 320 2.67e-74 233
MS.gene003289.t1 MTR_8g075100 40.909 308 173 6 25 332 21 319 4.75e-74 232
MS.gene003289.t1 MTR_5g016010 40.909 330 183 7 7 331 6 328 3.06e-72 228
MS.gene003289.t1 MTR_5g022870 41.424 309 170 8 25 332 18 316 6.85e-72 226
MS.gene003289.t1 MTR_4g074980 41.566 332 152 6 1 332 5 294 1.00e-70 223
MS.gene003289.t1 MTR_6g043280 39.595 346 175 9 9 333 1 333 2.10e-70 223
MS.gene003289.t1 MTR_1g009750 42.395 309 167 6 29 332 26 328 2.26e-70 223
MS.gene003289.t1 MTR_2g437770 41.196 301 164 5 33 332 53 341 3.04e-70 223
MS.gene003289.t1 MTR_4g132490 38.855 332 194 5 5 332 1 327 3.88e-70 222
MS.gene003289.t1 MTR_1g086320 38.253 332 199 4 5 332 4 333 8.27e-70 221
MS.gene003289.t1 MTR_1g025980 40.264 303 173 5 30 332 24 318 8.37e-70 221
MS.gene003289.t1 MTR_7g086820 39.016 305 176 5 28 332 18 312 1.42e-69 220
MS.gene003289.t1 MTR_1g086490 37.318 343 200 5 4 334 3 342 2.65e-69 221
MS.gene003289.t1 MTR_7g026990 40.134 299 168 5 34 332 35 322 4.44e-68 217
MS.gene003289.t1 MTR_4g095450 43.730 311 160 8 23 328 20 320 5.28e-68 216
MS.gene003289.t1 MTR_4g074980 45.455 264 127 5 1 262 5 253 1.28e-67 213
MS.gene003289.t1 MTR_0155s0040 37.578 322 181 8 11 332 14 315 2.52e-67 214
MS.gene003289.t1 MTR_6g043460 42.525 301 159 6 30 328 36 324 3.24e-67 215
MS.gene003289.t1 MTR_7g029030 42.038 314 163 8 25 332 20 320 6.20e-67 214
MS.gene003289.t1 MTR_2g008160 40.764 314 169 9 26 332 20 323 2.51e-66 212
MS.gene003289.t1 MTR_4g127670 43.092 304 162 5 29 328 23 319 3.36e-66 212
MS.gene003289.t1 MTR_1g077000 38.614 303 172 5 30 332 39 327 4.39e-66 212
MS.gene003289.t1 MTR_6g043240 42.157 306 158 9 30 332 42 331 8.44e-66 212
MS.gene003289.t1 MTR_1g090760 35.988 339 205 5 1 334 1 332 8.60e-66 211
MS.gene003289.t1 MTR_4g087965 39.016 305 180 4 29 329 41 343 1.23e-65 211
MS.gene003289.t1 MTR_1g038680 38.158 304 179 5 34 332 33 332 1.48e-64 208
MS.gene003289.t1 MTR_2g067440 37.322 351 181 8 16 331 40 386 1.04e-63 207
MS.gene003289.t1 MTR_3g092990 37.386 329 188 5 6 333 5 316 2.43e-63 204
MS.gene003289.t1 MTR_5g074860 39.198 324 146 5 12 332 11 286 1.70e-62 201
MS.gene003289.t1 MTR_1g009750 39.739 307 161 7 29 332 26 311 3.79e-62 201
MS.gene003289.t1 MTR_8g062780 36.335 322 197 4 16 334 10 326 8.88e-62 201
MS.gene003289.t1 MTR_2g078610 35.328 351 189 7 15 329 55 403 8.69e-60 198
MS.gene003289.t1 MTR_2g077990 35.714 350 187 7 15 328 55 402 1.27e-59 197
MS.gene003289.t1 MTR_6g027440 38.141 312 179 7 23 332 15 314 6.01e-59 193
MS.gene003289.t1 MTR_2g099175 34.304 309 192 4 29 333 35 336 3.35e-58 192
MS.gene003289.t1 MTR_0147s0010 35.494 324 174 4 27 331 74 381 3.75e-58 193
MS.gene003289.t1 MTR_7g086870 36.513 304 180 5 30 333 22 312 5.39e-58 190
MS.gene003289.t1 MTR_5g033470 35.256 312 192 8 27 332 70 377 6.97e-57 189
MS.gene003289.t1 MTR_2g078280 35.000 340 183 7 15 318 55 392 4.93e-55 185
MS.gene003289.t1 MTR_3g105790 36.508 315 191 4 22 334 17 324 7.80e-55 182
MS.gene003289.t1 MTR_0286s0010 34.839 310 194 5 26 332 30 334 1.56e-54 182
MS.gene003289.t1 MTR_6g008075 34.839 310 194 5 26 332 30 334 1.56e-54 182
MS.gene003289.t1 MTR_2g008730 36.877 301 158 5 34 332 31 301 2.45e-52 175
MS.gene003289.t1 MTR_2g067450 37.217 309 181 6 28 331 9 309 1.56e-51 174
MS.gene003289.t1 MTR_1g066380 34.528 307 191 4 28 332 25 323 1.34e-50 172
MS.gene003289.t1 MTR_2g008160 35.669 314 150 9 26 332 20 288 6.83e-50 169
MS.gene003289.t1 MTR_1g066640 34.740 308 191 4 27 332 24 323 1.37e-49 169
MS.gene003289.t1 MTR_1g066710 33.766 308 194 4 27 332 24 323 1.40e-49 169
MS.gene003289.t1 MTR_1g066680 34.740 308 190 5 27 332 24 322 8.49e-49 167
MS.gene003289.t1 MTR_4g132110 34.323 303 189 4 33 333 35 329 1.23e-48 167
MS.gene003289.t1 MTR_4g132110 33.657 309 188 6 33 333 35 334 3.71e-47 163
MS.gene003289.t1 MTR_3g072210 44.792 192 96 4 142 332 56 238 7.37e-44 151
MS.gene003289.t1 MTR_5g074700 40.426 235 114 6 103 334 5 216 1.91e-43 149
MS.gene003289.t1 MTR_2g008160 44.828 174 92 3 26 199 20 189 3.98e-42 146
MS.gene003289.t1 MTR_7g072490 39.200 250 88 4 76 325 2 187 5.91e-41 143
MS.gene003289.t1 MTR_1g066380 35.632 261 158 4 74 332 3 255 2.19e-40 143
MS.gene003289.t1 MTR_3g105790 37.083 240 146 3 97 334 12 248 2.85e-37 134
MS.gene003289.t1 MTR_3g072260 54.545 110 50 0 29 138 25 134 2.24e-35 126
MS.gene003289.t1 MTR_2g029930 56.250 112 21 3 15 112 4 101 1.26e-30 112
MS.gene003289.t1 MTR_2g077980 31.655 278 143 11 92 329 11 281 3.05e-25 103
MS.gene003289.t1 MTR_2g078560 31.416 226 123 5 136 331 96 319 3.30e-25 104
MS.gene003289.t1 MTR_3g462850 38.462 143 84 4 194 333 9 150 4.12e-23 94.4
MS.gene003289.t1 MTR_5g058120 37.805 164 88 3 165 328 6 155 4.97e-23 96.7
MS.gene003289.t1 MTR_7g086790 32.919 161 86 4 77 236 17 156 5.48e-20 87.0
MS.gene003289.t1 MTR_1g098320 48.780 82 40 1 251 332 45 124 9.47e-20 84.7
MS.gene003289.t1 MTR_1g089005 37.405 131 68 3 15 139 7 129 2.30e-17 78.6
MS.gene003289.t1 MTR_4g012865 46.479 71 38 0 27 97 74 144 7.53e-17 77.0
MS.gene003289.t1 MTR_5g074770 42.529 87 49 1 245 331 23 108 3.67e-15 71.2
MS.gene003289.t1 MTR_6g048160 50.685 73 32 2 69 141 22 90 5.76e-15 70.1
MS.gene003289.t1 MTR_4g114220 46.835 79 32 2 56 134 29 97 6.73e-15 71.6
MS.gene003289.t1 MTR_4g031040 39.516 124 55 4 142 264 27 131 1.88e-13 67.4
MS.gene003289.t1 MTR_7g107500 46.053 76 38 2 257 332 25 97 1.52e-11 60.8
MS.gene003289.t1 MTR_7g086810 30.579 121 58 1 28 148 4 98 1.75e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003289.t1 AT5G06730 58.896 326 133 1 15 340 18 342 2.12e-130 377
MS.gene003289.t1 AT5G06720 59.119 318 129 1 15 332 17 333 5.03e-129 373
MS.gene003289.t1 AT2G38380 55.183 328 140 3 26 352 27 348 1.01e-124 362
MS.gene003289.t1 AT2G38390 53.049 328 147 3 26 352 27 348 1.59e-119 349
MS.gene003289.t1 AT3G32980 54.232 319 143 3 26 342 27 344 3.05e-117 343
MS.gene003289.t1 AT3G49120 53.943 317 143 3 26 340 28 343 1.66e-115 339
MS.gene003289.t1 AT4G08770 51.393 323 154 3 26 346 20 341 8.54e-114 334
MS.gene003289.t1 AT3G49110 53.312 317 145 3 26 340 29 344 2.72e-113 333
MS.gene003289.t1 AT4G08780 50.774 323 156 3 26 346 20 341 2.83e-111 328
MS.gene003289.t1 AT5G66390 46.567 335 174 3 1 332 1 333 1.32e-100 300
MS.gene003289.t1 AT2G18140 47.239 326 169 3 7 332 13 335 6.92e-99 296
MS.gene003289.t1 AT2G18150 48.837 301 152 2 32 332 38 336 2.47e-98 295
MS.gene003289.t1 AT1G44970 48.718 312 157 2 21 332 38 346 7.52e-98 294
MS.gene003289.t1 AT3G50990 50.649 308 150 2 25 332 36 341 1.14e-97 293
MS.gene003289.t1 AT4G36430 47.573 309 160 2 25 333 25 331 2.42e-97 292
MS.gene003289.t1 AT5G19880 50.159 315 151 5 22 332 17 329 9.43e-97 290
MS.gene003289.t1 AT5G19890 51.948 308 137 6 28 332 28 327 7.68e-96 288
MS.gene003289.t1 AT5G05340 49.020 306 146 3 28 332 28 324 2.07e-93 282
MS.gene003289.t1 AT1G49570 46.557 305 159 2 28 330 46 348 1.93e-92 280
MS.gene003289.t1 AT1G14550 48.534 307 149 5 27 332 23 321 3.00e-92 279
MS.gene003289.t1 AT4G16270 45.545 303 161 3 30 332 50 348 2.93e-89 272
MS.gene003289.t1 AT1G68850 45.246 305 162 5 33 333 33 336 1.70e-88 270
MS.gene003289.t1 AT1G14540 46.605 324 155 5 9 332 10 315 4.47e-88 268
MS.gene003289.t1 AT5G58390 45.955 309 156 4 26 332 17 316 1.94e-85 261
MS.gene003289.t1 AT2G35380 46.395 319 162 5 18 332 22 335 1.59e-83 257
MS.gene003289.t1 AT1G71695 45.342 322 164 6 30 349 44 355 6.90e-83 256
MS.gene003289.t1 AT5G58400 44.828 319 162 5 16 332 19 325 4.20e-82 253
MS.gene003289.t1 AT2G22420 41.896 327 177 4 6 332 6 319 1.22e-81 252
MS.gene003289.t1 AT3G03670 39.877 326 191 4 7 332 1 321 2.43e-77 241
MS.gene003289.t1 AT5G17820 40.867 323 177 7 10 332 5 313 3.53e-77 240
MS.gene003289.t1 AT2G41480 43.210 324 167 8 15 332 16 328 3.54e-77 240
MS.gene003289.t1 AT1G05260 43.871 310 163 8 28 333 24 326 2.11e-76 238
MS.gene003289.t1 AT5G17820 40.867 323 177 7 10 332 58 366 5.89e-76 238
MS.gene003289.t1 AT4G11290 42.284 324 181 5 11 332 7 326 1.14e-75 236
MS.gene003289.t1 AT5G64120 43.667 300 158 7 34 332 39 328 2.07e-74 233
MS.gene003289.t1 AT2G18980 42.236 322 174 5 15 332 10 323 2.90e-74 233
MS.gene003289.t1 AT3G21770 41.987 312 174 5 19 328 18 324 2.06e-73 231
MS.gene003289.t1 AT5G51890 40.584 308 175 5 26 332 22 322 2.90e-73 230
MS.gene003289.t1 AT4G37530 42.444 311 171 5 26 332 23 329 1.15e-71 226
MS.gene003289.t1 AT5G67400 40.841 333 184 6 9 332 1 329 2.48e-71 225
MS.gene003289.t1 AT4G30170 41.935 310 168 6 27 332 24 325 2.21e-70 223
MS.gene003289.t1 AT4G25980 39.755 327 181 7 11 332 11 326 3.82e-70 222
MS.gene003289.t1 AT5G64110 43.894 303 156 7 34 332 38 330 5.10e-70 222
MS.gene003289.t1 AT5G15180 38.922 334 192 7 1 332 6 329 2.34e-69 220
MS.gene003289.t1 AT5G14130 41.424 309 175 4 25 332 27 330 3.51e-69 220
MS.gene003289.t1 AT5G14130 42.258 310 171 6 25 332 68 371 9.29e-69 220
MS.gene003289.t1 AT5G42180 38.486 317 186 6 15 331 9 316 2.28e-68 217
MS.gene003289.t1 AT5G39580 39.697 330 182 8 4 332 6 319 9.90e-68 216
MS.gene003289.t1 AT3G01190 37.963 324 192 6 9 332 7 321 2.54e-67 215
MS.gene003289.t1 AT4G37520 40.129 309 177 5 28 332 25 329 7.09e-66 211
MS.gene003289.t1 AT3G49960 39.210 329 187 7 9 332 9 329 2.93e-65 210
MS.gene003289.t1 AT1G05240 38.188 309 176 6 30 332 26 325 4.15e-65 209
MS.gene003289.t1 AT1G05250 38.188 309 176 6 30 332 26 325 4.15e-65 209
MS.gene003289.t1 AT4G37520 39.806 309 175 6 28 332 25 326 8.87e-65 208
MS.gene003289.t1 AT4G26010 39.423 312 166 7 25 332 17 309 2.19e-64 207
MS.gene003289.t1 AT4G26010 39.159 309 171 6 25 332 45 337 4.42e-64 207
MS.gene003289.t1 AT4G33420 36.254 331 196 6 2 332 10 325 3.54e-63 204
MS.gene003289.t1 AT4G33870 34.125 337 185 4 27 329 65 398 8.80e-63 206
MS.gene003289.t1 AT4G33420 36.254 331 196 6 2 332 57 372 1.65e-62 204
MS.gene003289.t1 AT5G64100 40.397 302 166 7 34 332 41 331 3.02e-62 202
MS.gene003289.t1 AT2G35380 46.371 248 128 4 89 332 1 247 1.23e-61 197
MS.gene003289.t1 AT3G28200 36.893 309 186 4 25 332 16 316 2.66e-61 199
MS.gene003289.t1 AT1G77100 38.782 312 174 7 26 332 20 319 3.09e-61 199
MS.gene003289.t1 AT5G40150 37.097 310 187 3 24 332 26 328 5.78e-61 199
MS.gene003289.t1 AT4G37530 43.295 261 142 4 26 282 23 281 2.15e-60 196
MS.gene003289.t1 AT1G30870 37.500 304 176 6 33 333 54 346 3.72e-60 197
MS.gene003289.t1 AT5G24070 37.338 308 175 7 33 332 38 335 4.33e-60 197
MS.gene003289.t1 AT2G39040 39.936 313 176 8 27 332 43 350 1.33e-59 196
MS.gene003289.t1 AT2G34060 36.688 308 187 5 27 329 39 343 5.53e-59 194
MS.gene003289.t1 AT4G31760 34.731 334 208 5 1 332 1 326 8.50e-59 193
MS.gene003289.t1 AT2G43480 33.528 343 203 7 7 332 1 335 1.96e-58 192
MS.gene003289.t1 AT4G17690 36.246 309 187 4 30 336 26 326 3.10e-58 191
MS.gene003289.t1 AT2G24800 37.459 307 184 3 28 332 29 329 1.41e-57 190
MS.gene003289.t1 AT5G47000 35.370 311 192 4 28 336 31 334 1.53e-56 187
MS.gene003289.t1 AT5G22410 36.102 313 185 8 22 329 20 322 2.59e-56 187
MS.gene003289.t1 AT1G34510 35.948 306 179 6 28 332 20 309 4.68e-56 185
MS.gene003289.t1 AT1G24110 35.385 325 200 7 11 332 5 322 4.74e-55 183
MS.gene003289.t1 AT3G17070 35.693 339 197 8 3 332 13 339 5.09e-52 176
MS.gene003289.t1 AT4G21960 35.082 305 184 5 33 333 34 328 1.93e-51 174
MS.gene003289.t1 AT2G37130 34.628 309 191 5 27 332 27 327 3.69e-49 168
MS.gene003289.t1 AT2G37130 34.653 303 187 5 33 332 2 296 6.06e-48 164
MS.gene003289.t1 AT4G25980 44.186 172 92 3 26 197 67 234 7.29e-41 145
MS.gene003289.t1 AT5G39580 38.136 236 124 6 4 232 6 226 2.05e-38 137
MS.gene003289.t1 AT3G17070 35.556 270 154 8 72 332 18 276 6.20e-36 132
MS.gene003289.t1 AT2G24800 40.237 169 95 3 28 195 29 192 4.76e-31 118

Find 77 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGGCTTCCATGATTAAAA+TGG 0.133915 2.4:+59658416 MS.gene003289:CDS
CCTCTTATTGAGTTGTTATT+TGG 0.150840 2.4:-59656649 None:intergenic
ACGGATCTTGTTGCACTTTC+AGG 0.216062 2.4:+59657847 MS.gene003289:CDS
ATGATTAAAATGGGTAATAT+TGG 0.243225 2.4:+59658426 MS.gene003289:CDS
TGCTAATATTTCATCTGTTC+TGG 0.254326 2.4:+59656756 MS.gene003289:CDS
ACCATCTTCTGATGAATCTT+TGG 0.276196 2.4:-59658526 None:intergenic
ACAATCGATCAACGAATAAA+AGG 0.285049 2.4:-59658116 None:intergenic
AGCTACCAACCTCACCAATT+TGG 0.293065 2.4:+59658230 MS.gene003289:CDS
AAACTATCTCTTCTTCCTAA+TGG 0.298706 2.4:-59657727 None:intergenic
CTTGCTAATTCAAGCCTTCC+TGG 0.310257 2.4:+59657766 MS.gene003289:CDS
CGCAGGCTCTTGGTCCTGAT+TGG 0.312320 2.4:+59657698 MS.gene003289:intron
GGTAATATTGGAGTGTTAAC+TGG 0.323726 2.4:+59658438 MS.gene003289:CDS
GTATGCTTGCCAGTTTCATT+AGG 0.349331 2.4:+59656348 MS.gene003289:CDS
GTAGCTAGATTGCCAATATC+AGG 0.351672 2.4:-59658213 None:intergenic
AAGCTTCAAAGAAAAGAGTT+TGG 0.356755 2.4:-59658392 None:intergenic
TTAATTCAGTAAGAAGAAAT+CGG 0.362570 2.4:-59657792 None:intergenic
CAAGCAATATGCCCTGATAT+TGG 0.367408 2.4:+59658201 MS.gene003289:CDS
ACCATTTCCAGCTTGGAGAT+TGG 0.375597 2.4:-59658292 None:intergenic
AAAACCTCCTTTCTTAATCA+AGG 0.377685 2.4:+59657814 MS.gene003289:CDS
TAACAACTCAATAAGAGGTT+TGG 0.401893 2.4:+59656654 MS.gene003289:CDS
TGGACAATGGAAGTGACATT+TGG 0.402176 2.4:-59656290 None:intergenic
AAAGTGAAGCCTAATGAAAC+TGG 0.404928 2.4:-59656357 None:intergenic
GCAGGCTCTTGGTCCTGATT+GGG 0.406274 2.4:+59657699 MS.gene003289:intron
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2.4:+59656209 MS.gene003289:CDS
TCCAATCTCCAAGCTGGAAA+TGG 0.422629 2.4:+59658291 MS.gene003289:CDS
TAGTTTGAGTCGAATGCATC+GGG 0.422778 2.4:-59658264 None:intergenic
TAATTCAGTAAGAAGAAATC+GGG 0.424072 2.4:-59657791 None:intergenic
CCTGATTGGGAAGTTCCATT+AGG 0.430222 2.4:+59657712 MS.gene003289:CDS
CCAAATAACAACTCAATAAG+AGG 0.437760 2.4:+59656649 MS.gene003289:CDS
AAGGCTTCCATGATTAAAAT+GGG 0.443699 2.4:+59658417 MS.gene003289:CDS
CCTAATGGAACTTCCCAATC+AGG 0.449764 2.4:-59657712 None:intergenic
TGATGAATCTTTGGTGACTT+TGG 0.453307 2.4:-59658517 None:intergenic
CAAGTGTCCTTGTAGAAGTT+AGG 0.456671 2.4:-59656266 None:intergenic
TGACCTAATTCGCAGGCTCT+TGG 0.463579 2.4:+59657688 MS.gene003289:intron
AAACATTTGCCAAGACACTT+TGG 0.466188 2.4:-59656310 None:intergenic
GAAACAAACCATTTCCAGCT+TGG 0.469111 2.4:-59658299 None:intergenic
TGTGTAGTGGTTGTGCTTGG+AGG 0.472368 2.4:+59656212 MS.gene003289:CDS
ATTGTGAGCGAGCAAGGAGC+TGG 0.476440 2.4:+59656625 MS.gene003289:CDS
TTCCATTGTCCAAAGTGTCT+TGG 0.498754 2.4:+59656301 MS.gene003289:CDS
AGTAATGTTGTGTTAAGAGT+TGG 0.499331 2.4:-59658168 None:intergenic
GTGTAGTGGTTGTGCTTGGA+GGG 0.502187 2.4:+59656213 MS.gene003289:CDS
GATACTATTGTGAGCGAGCA+AGG 0.508528 2.4:+59656619 MS.gene003289:CDS
TGTGCAGATATTCTTGCACT+TGG 0.512900 2.4:+59656733 MS.gene003289:CDS
TACGTCCAAATTGGTGAGGT+TGG 0.516617 2.4:-59658235 None:intergenic
CTTTGGTGACTTTGGTAGCA+AGG 0.519220 2.4:-59658509 None:intergenic
GTCGAGACCTTGATTAAGAA+AGG 0.525021 2.4:-59657821 None:intergenic
TACTACTCCAATCTCCAAGC+TGG 0.529234 2.4:+59658285 MS.gene003289:CDS
GTTGTGTTAAGAGTTGGATC+AGG 0.529705 2.4:-59658162 None:intergenic
GTAAGAAGAAATCGGGGACC+AGG 0.538411 2.4:-59657784 None:intergenic
AGCAGCTTTGTGCTGTGTAG+TGG 0.540972 2.4:+59656199 MS.gene003289:CDS
AAGTTGTGCATTTGAAGAGA+AGG 0.544272 2.4:-59656240 None:intergenic
AGTTGTGCATTTGAAGAGAA+GGG 0.549134 2.4:-59656239 None:intergenic
ACCAAAGATTCATCAGAAGA+TGG 0.551368 2.4:+59658525 MS.gene003289:CDS
GGTGCTCATACAATTGGTAG+AGG 0.555046 2.4:+59658087 MS.gene003289:intron
AACGGTATCATCGCCAGTTG+TGG 0.558581 2.4:-59658343 None:intergenic
GTAGTTTGAGTCGAATGCAT+CGG 0.574576 2.4:-59658265 None:intergenic
TGCCAAGACACTTTGGACAA+TGG 0.586007 2.4:-59656303 None:intergenic
TGCTTACGTCCAAATTGGTG+AGG 0.594113 2.4:-59658239 None:intergenic
TCTGCACAAGACACAACACT+AGG 0.601116 2.4:-59656718 None:intergenic
TTGTACAATTTCAATAACAC+CGG 0.601734 2.4:+59658135 MS.gene003289:CDS
GGAGTGTTAACTGGAACTCA+AGG 0.602686 2.4:+59658447 MS.gene003289:CDS
TTGTGAGCGAGCAAGGAGCT+GGG 0.604313 2.4:+59656626 MS.gene003289:CDS
ACTTGATCCTAACTTCTACA+AGG 0.616898 2.4:+59656259 MS.gene003289:CDS
AAAACTATTGACAATAGCAA+CGG 0.620180 2.4:-59658361 None:intergenic
ATGAAACTGGCAAGCATACG+AGG 0.628320 2.4:-59656344 None:intergenic
TAGCTAGATTGCCAATATCA+GGG 0.630539 2.4:-59658212 None:intergenic
AAGAGTTGGATCAGGAACTC+CGG 0.633072 2.4:-59658154 None:intergenic
GAAGAAATCGGGGACCAGGA+AGG 0.643746 2.4:-59657780 None:intergenic
CTGCACAAGACACAACACTA+GGG 0.647712 2.4:-59656717 None:intergenic
AATTCAGTAAGAAGAAATCG+GGG 0.655543 2.4:-59657790 None:intergenic
GAGACCTTGATTAAGAAAGG+AGG 0.668028 2.4:-59657818 None:intergenic
GTTTGAGTCGAATGCATCGG+GGG 0.672996 2.4:-59658262 None:intergenic
TGAAAGTGCAACAAGATCCG+TGG 0.681611 2.4:-59657845 None:intergenic
TAATCAAGGTCTCGACACCA+CGG 0.684464 2.4:+59657828 MS.gene003289:CDS
GAATCAAATCAAAGCCGCAG+TGG 0.686967 2.4:+59656684 MS.gene003289:CDS
AGTTTGAGTCGAATGCATCG+GGG 0.731684 2.4:-59658263 None:intergenic
AGGGCAAGCAAGTTCCACTG+CGG 0.840601 2.4:-59656698 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAACAAAAATAACTTA+AGG - chr2.4:59657404-59657423 None:intergenic 10.0%
!! ATAAATATCTAAATTCTAAA+GGG + chr2.4:59656955-59656974 MS.gene003289:intron 10.0%
!! TTAAAAATAGTATATTTACA+AGG - chr2.4:59657433-59657452 None:intergenic 10.0%
!! TTATATTTATGTTTATGAAA+GGG + chr2.4:59656565-59656584 MS.gene003289:intron 10.0%
!! TTTATATTTATGTTTATGAA+AGG + chr2.4:59656564-59656583 MS.gene003289:intron 10.0%
!!! AAAAAAAAGTATTAGAAAAT+TGG - chr2.4:59656420-59656439 None:intergenic 10.0%
!!! ATAATATGAATAAATTTTGT+AGG - chr2.4:59657485-59657504 None:intergenic 10.0%
!!! ATTAAATTTTGTAAGTAAAA+AGG - chr2.4:59656916-59656935 None:intergenic 10.0%
!!! ATTTTCTAATACTTTTTTTT+TGG + chr2.4:59656420-59656439 MS.gene003289:intron 10.0%
!!! TAATATGAATAAATTTTGTA+GGG - chr2.4:59657484-59657503 None:intergenic 10.0%
!! AGGAAATATGAATATATATA+GGG - chr2.4:59656795-59656814 None:intergenic 15.0%
!! GATAAATATCTAAATTCTAA+AGG + chr2.4:59656954-59656973 MS.gene003289:intron 15.0%
!! TAGGAAATATGAATATATAT+AGG - chr2.4:59656796-59656815 None:intergenic 15.0%
!! TATTAAAAGCAATTAAACAA+AGG - chr2.4:59657570-59657589 None:intergenic 15.0%
!! ATGATTAAAATGGGTAATAT+TGG + chr2.4:59658426-59658445 MS.gene003289:CDS 20.0%
!! GGGAATAAAACAAAATAATA+AGG - chr2.4:59657464-59657483 None:intergenic 20.0%
!! TAAAGGTTTAAATATCCAAA+TGG + chr2.4:59657345-59657364 MS.gene003289:intron 20.0%
!! TCAAAAGAAAGTTATAAAGA+AGG - chr2.4:59657048-59657067 None:intergenic 20.0%
!! TCAGTTATTATTGAAACTTA+TGG - chr2.4:59656840-59656859 None:intergenic 20.0%
!! TTAATTCAGTAAGAAGAAAT+CGG - chr2.4:59657795-59657814 None:intergenic 20.0%
!!! AAAACAAGTTTTAACATATG+TGG + chr2.4:59656865-59656884 MS.gene003289:intron 20.0%
!!! AAACAAAGGCATTTTTTTAA+AGG - chr2.4:59657556-59657575 None:intergenic 20.0%
!!! AAATGTACACATGATTTTTA+AGG - chr2.4:59657944-59657963 None:intergenic 20.0%
!!! AATATTACCCATTTTAATCA+TGG - chr2.4:59658427-59658446 None:intergenic 20.0%
!!! ATATGCTTTGATCATTTTTT+AGG + chr2.4:59658066-59658085 MS.gene003289:intron 20.0%
!!! TGATTGATCTTTTTCTATTT+AGG - chr2.4:59657310-59657329 None:intergenic 20.0%
!!! TTCTAATACTTTTTTTTTGG+TGG + chr2.4:59656423-59656442 MS.gene003289:intron 20.0%
! AAAACTATTGACAATAGCAA+CGG - chr2.4:59658364-59658383 None:intergenic 25.0%
! ATATGAATATATATAGGGTG+TGG - chr2.4:59656790-59656809 None:intergenic 25.0%
! CATCTTTGATCAAATAATCA+AGG + chr2.4:59657246-59657265 MS.gene003289:intron 25.0%
! CTTGATTATTTGATCAAAGA+TGG - chr2.4:59657248-59657267 None:intergenic 25.0%
! TAAAGAAAGAACAATGATCA+TGG - chr2.4:59657011-59657030 None:intergenic 25.0%
! TAATTCAGTAAGAAGAAATC+GGG - chr2.4:59657794-59657813 None:intergenic 25.0%
! TATAATAATAACAAGTCGTG+AGG - chr2.4:59657607-59657626 None:intergenic 25.0%
! TGATCAAATAATCAAGGATT+GGG + chr2.4:59657252-59657271 MS.gene003289:intron 25.0%
! TTGATCAAATAATCAAGGAT+TGG + chr2.4:59657251-59657270 MS.gene003289:intron 25.0%
! TTGTACAATTTCAATAACAC+CGG + chr2.4:59658135-59658154 MS.gene003289:CDS 25.0%
!! CTAAAAACGTGACTAAATTT+TGG + chr2.4:59656522-59656541 MS.gene003289:intron 25.0%
!! GTGTAGAGATATAGATTTTA+AGG - chr2.4:59657888-59657907 None:intergenic 25.0%
!!! TCTTTTCTTTGAAGCTTTTA+AGG + chr2.4:59658398-59658417 MS.gene003289:CDS 25.0%
AAAACCTCCTTTCTTAATCA+AGG + chr2.4:59657814-59657833 MS.gene003289:CDS 30.0%
AAACTATCTCTTCTTCCTAA+TGG - chr2.4:59657730-59657749 None:intergenic 30.0%
AAGCATATACAATTAGACAC+CGG - chr2.4:59658054-59658073 None:intergenic 30.0%
AAGCTTCAAAGAAAAGAGTT+TGG - chr2.4:59658395-59658414 None:intergenic 30.0%
AAGGCTTCCATGATTAAAAT+GGG + chr2.4:59658417-59658436 MS.gene003289:CDS 30.0%
AATTCAGTAAGAAGAAATCG+GGG - chr2.4:59657793-59657812 None:intergenic 30.0%
ACAATCGATCAACGAATAAA+AGG - chr2.4:59658119-59658138 None:intergenic 30.0%
ACTCATTATGTAGGTATACT+CGG + chr2.4:59658028-59658047 MS.gene003289:intron 30.0%
AGTAATGTTGTGTTAAGAGT+TGG - chr2.4:59658171-59658190 None:intergenic 30.0%
ATTATTTGATCAAAGATGGC+CGG - chr2.4:59657244-59657263 None:intergenic 30.0%
CCAAATAACAACTCAATAAG+AGG + chr2.4:59656649-59656668 MS.gene003289:CDS 30.0%
CTCTCAAGATAAAGTCTAAT+AGG + chr2.4:59657515-59657534 MS.gene003289:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr2.4:59656459-59656478 None:intergenic 30.0%
TAACAACTCAATAAGAGGTT+TGG + chr2.4:59656654-59656673 MS.gene003289:CDS 30.0%
TAAGGCTTCCATGATTAAAA+TGG + chr2.4:59658416-59658435 MS.gene003289:CDS 30.0%
TCAAAATCATTGACATTTGC+AGG - chr2.4:59657373-59657392 None:intergenic 30.0%
TCATGTGGAAGGAAAAAAAA+AGG - chr2.4:59656891-59656910 None:intergenic 30.0%
TGCTAATATTTCATCTGTTC+TGG + chr2.4:59656756-59656775 MS.gene003289:CDS 30.0%
! ACATTAATAGTCTTACCGTT+AGG + chr2.4:59656981-59657000 MS.gene003289:intron 30.0%
! CCTCTTATTGAGTTGTTATT+TGG - chr2.4:59656652-59656671 None:intergenic 30.0%
! TGTACATTTTACAACCGTTT+CGG + chr2.4:59657955-59657974 MS.gene003289:intron 30.0%
! TTTTTCTCTCCTAGAATAGT+GGG - chr2.4:59657158-59657177 None:intergenic 30.0%
!!! TTTTTAGGTGCTCATACAAT+TGG + chr2.4:59658081-59658100 MS.gene003289:intron 30.0%
!!! TTTTTTCTCTCCTAGAATAG+TGG - chr2.4:59657159-59657178 None:intergenic 30.0%
!!! TTTTTTTTTCCTTCCACATG+AGG + chr2.4:59656890-59656909 MS.gene003289:intron 30.0%
AAACATTTGCCAAGACACTT+TGG - chr2.4:59656313-59656332 None:intergenic 35.0%
AAAGTGAAGCCTAATGAAAC+TGG - chr2.4:59656360-59656379 None:intergenic 35.0%
AAGTTGTGCATTTGAAGAGA+AGG - chr2.4:59656243-59656262 None:intergenic 35.0%
AATGATCATGGTTGACCTAA+CGG - chr2.4:59656999-59657018 None:intergenic 35.0%
ACCAAAGATTCATCAGAAGA+TGG + chr2.4:59658525-59658544 MS.gene003289:CDS 35.0%
ACCATCTTCTGATGAATCTT+TGG - chr2.4:59658529-59658548 None:intergenic 35.0%
ACTTGATCCTAACTTCTACA+AGG + chr2.4:59656259-59656278 MS.gene003289:CDS 35.0%
AGTTGTGCATTTGAAGAGAA+GGG - chr2.4:59656242-59656261 None:intergenic 35.0%
AGTTTAAATCTCCTCCGAAA+CGG - chr2.4:59657972-59657991 None:intergenic 35.0%
GAGCTGATAACTCATTATGT+AGG + chr2.4:59658019-59658038 MS.gene003289:intron 35.0%
TAGCTAGATTGCCAATATCA+GGG - chr2.4:59658215-59658234 None:intergenic 35.0%
TCGTCTTAGGAATGAGATAT+AGG - chr2.4:59656815-59656834 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr2.4:59656454-59656473 None:intergenic 35.0%
! GGTAATATTGGAGTGTTAAC+TGG + chr2.4:59658438-59658457 MS.gene003289:CDS 35.0%
! TGATGAATCTTTGGTGACTT+TGG - chr2.4:59658520-59658539 None:intergenic 35.0%
!! GAAACTTTCTAGCTACTTAG+TGG - chr2.4:59657285-59657304 None:intergenic 35.0%
!! TACTTGTGTCTCATTTTTCC+TGG + chr2.4:59657665-59657684 MS.gene003289:intron 35.0%
!!! TTTTTTTTTGGTGGTGTCTC+CGG + chr2.4:59656432-59656451 MS.gene003289:intron 35.0%
AGCAATGAAAGTCTCTTAGC+CGG + chr2.4:59657222-59657241 MS.gene003289:intron 40.0%
ATTATGTAGGTATACTCGGC+CGG + chr2.4:59658032-59658051 MS.gene003289:intron 40.0%
CAAGCAATATGCCCTGATAT+TGG + chr2.4:59658201-59658220 MS.gene003289:CDS 40.0%
CAAGTGTCCTTGTAGAAGTT+AGG - chr2.4:59656269-59656288 None:intergenic 40.0%
GAAACAAACCATTTCCAGCT+TGG - chr2.4:59658302-59658321 None:intergenic 40.0%
GAAACTTATGGAGTCGTCTT+AGG - chr2.4:59656828-59656847 None:intergenic 40.0%
GAGACCTTGATTAAGAAAGG+AGG - chr2.4:59657821-59657840 None:intergenic 40.0%
GTAAGTAAAAAGGCCTCATG+TGG - chr2.4:59656906-59656925 None:intergenic 40.0%
GTAGCTAGATTGCCAATATC+AGG - chr2.4:59658216-59658235 None:intergenic 40.0%
GTAGTTTGAGTCGAATGCAT+CGG - chr2.4:59658268-59658287 None:intergenic 40.0%
GTATGCTTGCCAGTTTCATT+AGG + chr2.4:59656348-59656367 MS.gene003289:CDS 40.0%
GTCGAGACCTTGATTAAGAA+AGG - chr2.4:59657824-59657843 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+AGG - chr2.4:59658165-59658184 None:intergenic 40.0%
TAGTTTGAGTCGAATGCATC+GGG - chr2.4:59658267-59658286 None:intergenic 40.0%
TGACATTTGCAGGTACCATT+TGG - chr2.4:59657363-59657382 None:intergenic 40.0%
TGGACAATGGAAGTGACATT+TGG - chr2.4:59656293-59656312 None:intergenic 40.0%
TGTGCAGATATTCTTGCACT+TGG + chr2.4:59656733-59656752 MS.gene003289:CDS 40.0%
! ACATTTTACAACCGTTTCGG+AGG + chr2.4:59657958-59657977 MS.gene003289:intron 40.0%
! TTCCATTGTCCAAAGTGTCT+TGG + chr2.4:59656301-59656320 MS.gene003289:CDS 40.0%
!! CTTTCTAGCTACTTAGTGGA+TGG - chr2.4:59657281-59657300 None:intergenic 40.0%
!!! CAAGAGCTTTTTTCCACAAC+TGG + chr2.4:59658330-59658349 MS.gene003289:CDS 40.0%
AAGAGTTGGATCAGGAACTC+CGG - chr2.4:59658157-59658176 None:intergenic 45.0%
ACCATTTCCAGCTTGGAGAT+TGG - chr2.4:59658295-59658314 None:intergenic 45.0%
ACGGATCTTGTTGCACTTTC+AGG + chr2.4:59657847-59657866 MS.gene003289:CDS 45.0%
AGCTACCAACCTCACCAATT+TGG + chr2.4:59658230-59658249 MS.gene003289:CDS 45.0%
AGTTTGAGTCGAATGCATCG+GGG - chr2.4:59658266-59658285 None:intergenic 45.0%
ATGAAACTGGCAAGCATACG+AGG - chr2.4:59656347-59656366 None:intergenic 45.0%
CCTAATGGAACTTCCCAATC+AGG - chr2.4:59657715-59657734 None:intergenic 45.0%
CCTGATTGGGAAGTTCCATT+AGG + chr2.4:59657712-59657731 MS.gene003289:CDS 45.0%
CTGCACAAGACACAACACTA+GGG - chr2.4:59656720-59656739 None:intergenic 45.0%
CTTGCTAATTCAAGCCTTCC+TGG + chr2.4:59657766-59657785 MS.gene003289:CDS 45.0%
GAATCAAATCAAAGCCGCAG+TGG + chr2.4:59656684-59656703 MS.gene003289:CDS 45.0%
GATACTATTGTGAGCGAGCA+AGG + chr2.4:59656619-59656638 MS.gene003289:CDS 45.0%
GGTGCTCATACAATTGGTAG+AGG + chr2.4:59658087-59658106 MS.gene003289:intron 45.0%
GTAAAAAGGCCTCATGTGGA+AGG - chr2.4:59656902-59656921 None:intergenic 45.0%
TAATCAAGGTCTCGACACCA+CGG + chr2.4:59657828-59657847 MS.gene003289:CDS 45.0%
TACGTCCAAATTGGTGAGGT+TGG - chr2.4:59658238-59658257 None:intergenic 45.0%
TACTACTCCAATCTCCAAGC+TGG + chr2.4:59658285-59658304 MS.gene003289:CDS 45.0%
TCCAATCTCCAAGCTGGAAA+TGG + chr2.4:59658291-59658310 MS.gene003289:CDS 45.0%
TCGGAGGAGATTTAAACTCG+AGG + chr2.4:59657974-59657993 MS.gene003289:intron 45.0%
TCTGCACAAGACACAACACT+AGG - chr2.4:59656721-59656740 None:intergenic 45.0%
TGCCAAGACACTTTGGACAA+TGG - chr2.4:59656306-59656325 None:intergenic 45.0%
TGCTTACGTCCAAATTGGTG+AGG - chr2.4:59658242-59658261 None:intergenic 45.0%
! CTTTGGTGACTTTGGTAGCA+AGG - chr2.4:59658512-59658531 None:intergenic 45.0%
! GGAGTGTTAACTGGAACTCA+AGG + chr2.4:59658447-59658466 MS.gene003289:CDS 45.0%
! TGAAAGTGCAACAAGATCCG+TGG - chr2.4:59657848-59657867 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr2.4:59656481-59656500 None:intergenic 45.0%
!! CAATTAAAATATATATTTAA+AGG + chr2.4:59657328-59657347 MS.gene003289:intron 5.0%
AACGGTATCATCGCCAGTTG+TGG - chr2.4:59658346-59658365 None:intergenic 50.0%
CCAACTGAGCTAAGCTCACA+AGG + chr2.4:59656483-59656502 MS.gene003289:intron 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG - chr2.4:59656486-59656505 None:intergenic 50.0%
GTAAGAAGAAATCGGGGACC+AGG - chr2.4:59657787-59657806 None:intergenic 50.0%
GTGTAGTGGTTGTGCTTGGA+GGG + chr2.4:59656213-59656232 MS.gene003289:CDS 50.0%
GTTTGAGTCGAATGCATCGG+GGG - chr2.4:59658265-59658284 None:intergenic 50.0%
TCGAACCTGCCCACTATTCT+AGG + chr2.4:59657146-59657165 MS.gene003289:intron 50.0%
TGACCTAATTCGCAGGCTCT+TGG + chr2.4:59657688-59657707 MS.gene003289:intron 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG + chr2.4:59656209-59656228 MS.gene003289:CDS 50.0%
TGTGTAGTGGTTGTGCTTGG+AGG + chr2.4:59656212-59656231 MS.gene003289:CDS 50.0%
TTCCTGGTGACCTAATTCGC+AGG + chr2.4:59657681-59657700 MS.gene003289:intron 50.0%
! AGCAGCTTTGTGCTGTGTAG+TGG + chr2.4:59656199-59656218 MS.gene003289:CDS 50.0%
!! TCTCTCCTAGAATAGTGGGC+AGG - chr2.4:59657154-59657173 None:intergenic 50.0%
AGCCTGCGAATTAGGTCACC+AGG - chr2.4:59657686-59657705 None:intergenic 55.0%
AGGGCAAGCAAGTTCCACTG+CGG - chr2.4:59656701-59656720 None:intergenic 55.0%
ATTGTGAGCGAGCAAGGAGC+TGG + chr2.4:59656625-59656644 MS.gene003289:CDS 55.0%
GAAGAAATCGGGGACCAGGA+AGG - chr2.4:59657783-59657802 None:intergenic 55.0%
GCAGGCTCTTGGTCCTGATT+GGG + chr2.4:59657699-59657718 MS.gene003289:intron 55.0%
GGACCAAGAGCCTGCGAATT+AGG - chr2.4:59657694-59657713 None:intergenic 55.0%
TTGTGAGCGAGCAAGGAGCT+GGG + chr2.4:59656626-59656645 MS.gene003289:CDS 55.0%
!! GGGGGTGCTTACGTCCAAAT+TGG - chr2.4:59658247-59658266 None:intergenic 55.0%
CGCAGGCTCTTGGTCCTGAT+TGG + chr2.4:59657698-59657717 MS.gene003289:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 59656173 59658566 59656173 ID=MS.gene003289
chr2.4 mRNA 59656173 59658566 59656173 ID=MS.gene003289.t1;Parent=MS.gene003289
chr2.4 exon 59656173 59656397 59656173 ID=MS.gene003289.t1.exon1;Parent=MS.gene003289.t1
chr2.4 CDS 59656173 59656397 59656173 ID=cds.MS.gene003289.t1;Parent=MS.gene003289.t1
chr2.4 exon 59656586 59656777 59656586 ID=MS.gene003289.t1.exon2;Parent=MS.gene003289.t1
chr2.4 CDS 59656586 59656777 59656586 ID=cds.MS.gene003289.t1;Parent=MS.gene003289.t1
chr2.4 exon 59657703 59657868 59657703 ID=MS.gene003289.t1.exon3;Parent=MS.gene003289.t1
chr2.4 CDS 59657703 59657868 59657703 ID=cds.MS.gene003289.t1;Parent=MS.gene003289.t1
chr2.4 exon 59658088 59658566 59658088 ID=MS.gene003289.t1.exon4;Parent=MS.gene003289.t1
chr2.4 CDS 59658088 59658566 59658088 ID=cds.MS.gene003289.t1;Parent=MS.gene003289.t1
Gene Sequence

>MS.gene003289

ATGAACTCTTCTTTTCATCTCACATTAGCAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTTCCCTTCTCTTCAAATGCACAACTTGATCCTAACTTCTACAAGGACACTTGTCCAAATGTCACTTCCATTGTCCAAAGTGTCTTGGCAAATGTTTCTCAGACAGATCCTCGTATGCTTGCCAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGTATGTATTATATTATATACCAATTTTCTAATACTTTTTTTTTGGTGGTGTCTCCGGACCTTGCATATATTATGCATTGTCCATACCAACTGAGCTAAGCTCACAAGGACAATTTTCTAATACTCTAAAAACGTGACTAAATTTTGGATATTAATAGCTCATATATTTTATATTTATGTTTATGAAAGGGTTGTGATGCATCACTCTTGTTGAATGACACTGATACTATTGTGAGCGAGCAAGGAGCTGGGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAGCCGCAGTGGAACTTGCTTGCCCTAGTGTTGTGTCTTGTGCAGATATTCTTGCACTTGGTGCTAATATTTCATCTGTTCTGGTATATGTTCCACACCCTATATATATTCATATTTCCTATATCTCATTCCTAAGACGACTCCATAAGTTTCAATAATAACTGAGATGTAAAACAAGTTTTAACATATGTGGCCTTTTTTTTTCCTTCCACATGAGGCCTTTTTACTTACAAAATTTAATAAAAATAACTTTTTTGTTGATAAATATCTAAATTCTAAAGGGAGAACATTAATAGTCTTACCGTTAGGTCAACCATGATCATTGTTCTTTCTTTATAATGCAAATTGTTCCTTCTTTATAACTTTCTTTTGATTTTGTTTTTCATTATCTTTAAAACTTATCTTATTCAAACTCTAATAGACGTGTTTAATAAAAAAAATTAAATCTTCTTCGAACCTGCCCACTATTCTAGGAGAGAAAAAAATAAATATAAAATGAGTTGATGACTTTGTTAAAACAAGTCATTAGCAATGAAAGTCTCTTAGCCGGCCATCTTTGATCAAATAATCAAGGATTGGGATTCCATCCACTAAGTAGCTAGAAAGTTTCAGCCTAAATAGAAAAAGATCAATCAATTAAAATATATATTTAAAGGTTTAAATATCCAAATGGTACCTGCAAATGTCAATGATTTTGATTTAAGTTCCTTAAGTTATTTTTGTTTTATTTTCAGTCCTTGTAAATATACTATTTTTAACTTTTGATCCTTATTATTTTGTTTTATTCCCTACAAAATTTATTCATATTATCGATTTTAGTCTCTCAAGATAAAGTCTAATAGGAATTTTTGACAAGTACCTTTAAAAAAATGCCTTTGTTTAATTGCTTTTAATAAACTATTTTTTTTTCCTCACGACTTGTTATTATTATATGATTTTTTCTTTTCTTGTTGCGTTCTTACTATTATTTTACTTGTGTCTCATTTTTCCTGGTGACCTAATTCGCAGGCTCTTGGTCCTGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTGAATGCAAGTCAAGCTCTTGCTAATTCAAGCCTTCCTGGTCCCCGATTTCTTCTTACTGAATTAAAAACCTCCTTTCTTAATCAAGGTCTCGACACCACGGATCTTGTTGCACTTTCAGGTATAAATGTTTCTCTCCTTAAAATCTATATCTCTACACAAAACATGTGTACATATATTTCTATACGCGTGTCCTTAAAAATCATGTGTACATTTTACAACCGTTTCGGAGGAGATTTAAACTCGAGGTTATAAAAAATTTAAAATCATTGAGCTGATAACTCATTATGTAGGTATACTCGGCCGGTGTCTAATTGTATATGCTTTGATCATTTTTTAGGTGCTCATACAATTGGTAGAGGTGTATGCCTTTTATTCGTTGATCGATTGTACAATTTCAATAACACCGGAGTTCCTGATCCAACTCTTAACACAACATTACTACAATCATTGCAAGCAATATGCCCTGATATTGGCAATCTAGCTACCAACCTCACCAATTTGGACGTAAGCACCCCCGATGCATTCGACTCAAACTACTACTCCAATCTCCAAGCTGGAAATGGTTTGTTTCAGAGTGATCAAGAGCTTTTTTCCACAACTGGCGATGATACCGTTGCTATTGTCAATAGTTTTAGCAGCAACCAAACTCTTTTCTTTGAAGCTTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGAGTGTTAACTGGAACTCAAGGTGAAGTTAGAACACACTGTAACTTTGTTAATACTGTTAGCCTTGCTACCAAAGTCACCAAAGATTCATCAGAAGATGGTATTGTTAGCTCATTCTAA
Protein sequence

>MS.gene003289.t1

MNSSFHLTLAALCCVVVVLGGFPFSSNAQLDPNFYKDTCPNVTSIVQSVLANVSQTDPRMLASFIRLHFHDCFVQGCDASLLLNDTDTIVSEQGAGPNNNSIRGLDVVNQIKAAVELACPSVVSCADILALGANISSVLALGPDWEVPLGRRDSLNASQALANSSLPGPRFLLTELKTSFLNQGLDTTDLVALSGAHTIGRGVCLLFVDRLYNFNNTGVPDPTLNTTLLQSLQAICPDIGNLATNLTNLDVSTPDAFDSNYYSNLQAGNGLFQSDQELFSTTGDDTVAIVNSFSSNQTLFFEAFKASMIKMGNIGVLTGTQGEVRTHCNFVNTVSLATKVTKDSSEDGIVSSF