AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003274

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003274.t1 MTR_2g029560 97.093 344 10 0 1 344 1 344 0.0 684
MS.gene003274.t1 MTR_2g029730 84.638 345 52 1 1 344 1 345 0.0 595
MS.gene003274.t1 MTR_2g029740 68.142 339 103 1 1 334 1 339 2.66e-168 473
MS.gene003274.t1 MTR_2g029820 66.377 345 109 2 1 338 1 345 1.03e-166 469
MS.gene003274.t1 MTR_2g029800 66.087 345 110 2 1 338 1 345 6.11e-165 464
MS.gene003274.t1 MTR_2g029815 66.857 350 109 2 1 343 1 350 7.67e-165 464
MS.gene003274.t1 MTR_2g029830 71.613 310 88 0 22 331 26 335 1.16e-162 458
MS.gene003274.t1 MTR_2g029750 64.881 336 113 1 1 331 1 336 1.67e-159 450
MS.gene003274.t1 MTR_2g028980 65.749 327 112 0 9 335 14 340 8.21e-158 446
MS.gene003274.t1 MTR_2g029860 64.023 353 115 3 4 344 1 353 5.39e-156 441
MS.gene003274.t1 MTR_2g029850 62.784 352 123 2 1 344 1 352 1.01e-153 436
MS.gene003274.t1 MTR_2g029910 62.974 343 119 3 10 344 11 353 1.05e-152 433
MS.gene003274.t1 MTR_2g029830 73.384 263 70 0 69 331 5 267 4.25e-140 399
MS.gene003274.t1 MTR_7g093370 57.595 316 133 1 12 326 57 372 7.29e-125 363
MS.gene003274.t1 MTR_1g054205 53.823 327 150 1 1 326 1 327 7.19e-123 357
MS.gene003274.t1 MTR_4g125940 53.094 307 140 2 22 326 26 330 8.13e-109 321
MS.gene003274.t1 MTR_5g021060 50.993 302 147 1 24 325 30 330 1.96e-107 317
MS.gene003274.t1 MTR_8g076820 49.669 302 151 1 24 325 30 330 1.37e-104 310
MS.gene003274.t1 MTR_5g017850 51.148 305 145 3 22 325 25 326 7.61e-103 305
MS.gene003274.t1 MTR_4g125940 55.435 276 119 2 53 326 2 275 2.06e-102 302
MS.gene003274.t1 MTR_5g017860 49.843 319 155 4 9 325 11 326 5.52e-102 303
MS.gene003274.t1 MTR_2g040000 49.186 307 151 2 23 326 28 332 3.05e-100 299
MS.gene003274.t1 MTR_4g029200 48.197 305 149 2 21 325 43 338 1.10e-97 293
MS.gene003274.t1 MTR_1g022970 48.013 302 157 0 24 325 46 347 1.70e-97 293
MS.gene003274.t1 MTR_3g094650 50.662 302 138 4 22 321 26 318 2.68e-97 291
MS.gene003274.t1 MTR_5g074760 47.619 315 154 5 14 325 15 321 5.31e-97 290
MS.gene003274.t1 MTR_2g084080 45.963 322 165 2 4 325 5 317 3.41e-96 288
MS.gene003274.t1 MTR_5g074970 45.566 327 165 5 3 325 9 326 3.92e-96 288
MS.gene003274.t1 MTR_2g084110 49.180 305 144 3 22 325 23 317 6.49e-96 287
MS.gene003274.t1 MTR_4g122640 46.689 302 158 2 24 325 38 336 1.21e-95 287
MS.gene003274.t1 MTR_5g074740 46.984 315 156 5 14 325 15 321 2.63e-95 286
MS.gene003274.t1 MTR_5g074860 48.039 306 148 4 22 324 27 324 3.49e-95 286
MS.gene003274.t1 MTR_4g029190 48.208 307 147 4 22 325 43 340 6.77e-95 286
MS.gene003274.t1 MTR_5g049280 44.720 322 169 4 10 325 19 337 6.71e-94 283
MS.gene003274.t1 MTR_5g083860 46.440 323 160 5 7 325 12 325 7.23e-94 283
MS.gene003274.t1 MTR_3g466200 46.372 317 158 5 12 325 13 320 7.49e-94 282
MS.gene003274.t1 MTR_3g072190 46.535 303 153 2 23 325 25 318 9.41e-94 282
MS.gene003274.t1 MTR_5g074710 46.984 315 156 5 14 325 15 321 1.05e-93 282
MS.gene003274.t1 MTR_2g084090 47.213 305 151 3 22 325 23 318 1.08e-93 282
MS.gene003274.t1 MTR_7g072510 46.711 304 153 2 22 325 18 312 2.99e-93 280
MS.gene003274.t1 MTR_4g029170 46.395 319 158 5 10 325 13 321 3.54e-93 281
MS.gene003274.t1 MTR_5g014100 46.452 310 162 2 20 325 22 331 5.43e-93 281
MS.gene003274.t1 MTR_4g083710 49.186 307 146 4 22 325 25 324 6.78e-92 278
MS.gene003274.t1 MTR_3g094670 47.095 327 158 5 1 321 1 318 2.45e-91 276
MS.gene003274.t1 MTR_2g084010 44.785 326 171 3 1 325 1 318 2.51e-91 276
MS.gene003274.t1 MTR_7g072480 46.711 304 153 2 22 325 22 316 4.27e-91 275
MS.gene003274.t1 MTR_2g084020 44.479 326 172 3 1 325 1 318 2.11e-90 273
MS.gene003274.t1 MTR_4g029180 48.000 300 145 4 28 325 31 321 3.74e-90 273
MS.gene003274.t1 MTR_3g094630 47.468 316 155 4 12 325 16 322 6.07e-89 270
MS.gene003274.t1 MTR_2g084000 45.246 305 157 4 22 325 24 319 9.78e-87 264
MS.gene003274.t1 MTR_1g115900 43.038 316 168 5 13 326 17 322 4.36e-86 263
MS.gene003274.t1 MTR_7g026990 43.692 325 164 6 6 326 14 323 1.17e-85 261
MS.gene003274.t1 MTR_4g074995 46.906 307 140 4 22 325 22 308 4.26e-85 259
MS.gene003274.t1 MTR_3g466180 43.810 315 167 3 11 325 19 323 1.28e-84 259
MS.gene003274.t1 MTR_3g467600 44.625 307 160 3 22 325 25 324 4.80e-84 257
MS.gene003274.t1 MTR_4g133800 44.295 298 155 6 29 325 46 333 1.57e-83 256
MS.gene003274.t1 MTR_4g046713 41.896 327 185 5 1 325 3 326 2.18e-83 256
MS.gene003274.t1 MTR_2g088770 42.415 323 179 6 5 325 8 325 2.64e-82 253
MS.gene003274.t1 MTR_2g008710 45.364 302 154 5 28 325 31 325 4.69e-82 252
MS.gene003274.t1 MTR_4g030890 42.763 304 169 3 22 325 98 396 9.28e-82 254
MS.gene003274.t1 MTR_2g029880 60.190 211 72 3 136 344 9 209 1.50e-81 247
MS.gene003274.t1 MTR_4g031140 42.763 304 167 4 24 326 28 325 8.61e-81 250
MS.gene003274.t1 MTR_4g074990 42.378 328 163 3 1 325 1 305 1.86e-80 248
MS.gene003274.t1 MTR_5g022870 42.904 303 163 7 24 325 23 316 7.40e-80 246
MS.gene003274.t1 MTR_4g114210 43.042 309 164 6 22 325 19 320 1.04e-79 246
MS.gene003274.t1 MTR_1g101830 39.077 325 192 4 1 325 4 322 2.41e-79 245
MS.gene003274.t1 MTR_2g437770 43.092 304 161 6 24 326 50 342 1.33e-78 244
MS.gene003274.t1 MTR_6g043280 41.846 325 169 7 10 325 19 332 1.43e-78 244
MS.gene003274.t1 MTR_1g086320 40.606 330 185 4 5 325 6 333 7.67e-78 242
MS.gene003274.t1 MTR_1g038680 42.574 303 166 5 28 325 33 332 1.10e-77 241
MS.gene003274.t1 MTR_1g077000 42.053 302 162 5 24 325 39 327 1.19e-77 241
MS.gene003274.t1 MTR_3g092990 40.065 307 181 2 21 326 23 327 3.65e-77 240
MS.gene003274.t1 MTR_1g086490 40.774 336 181 5 6 325 7 340 3.23e-76 238
MS.gene003274.t1 MTR_7g107520 41.562 320 180 5 6 325 8 320 3.75e-76 237
MS.gene003274.t1 MTR_8g075100 41.914 303 166 7 24 325 26 319 7.58e-76 236
MS.gene003274.t1 MTR_1g025980 41.584 303 168 6 24 325 24 318 9.03e-76 236
MS.gene003274.t1 MTR_3g072190 45.174 259 133 2 67 325 2 251 2.90e-75 233
MS.gene003274.t1 MTR_6g043240 42.378 328 164 8 10 326 19 332 7.17e-75 235
MS.gene003274.t1 MTR_0155s0040 39.062 320 181 6 6 325 10 315 6.86e-74 231
MS.gene003274.t1 MTR_5g074860 41.830 306 128 5 22 324 27 285 5.07e-73 228
MS.gene003274.t1 MTR_7g086820 39.869 306 175 5 20 325 16 312 5.46e-73 229
MS.gene003274.t1 MTR_4g074980 42.105 304 144 4 22 325 23 294 6.49e-73 228
MS.gene003274.t1 MTR_5g016010 39.339 333 188 8 1 324 1 328 6.23e-71 224
MS.gene003274.t1 MTR_6g027440 40.994 322 182 5 4 325 1 314 9.02e-71 223
MS.gene003274.t1 MTR_7g029030 40.426 329 180 7 4 325 1 320 9.91e-71 223
MS.gene003274.t1 MTR_4g074980 47.257 237 116 2 22 255 23 253 1.11e-70 221
MS.gene003274.t1 MTR_4g132490 39.016 305 179 4 23 325 28 327 3.23e-69 219
MS.gene003274.t1 MTR_6g043460 42.000 300 161 6 24 321 36 324 8.82e-69 219
MS.gene003274.t1 MTR_1g009750 39.458 332 190 7 1 325 1 328 1.19e-68 218
MS.gene003274.t1 MTR_1g090760 38.111 307 185 4 22 325 26 330 4.92e-68 217
MS.gene003274.t1 MTR_2g008160 41.479 311 166 9 22 325 22 323 5.29e-67 214
MS.gene003274.t1 MTR_4g087965 38.361 305 181 5 23 322 41 343 8.06e-67 214
MS.gene003274.t1 MTR_4g127670 39.404 302 175 4 23 321 23 319 7.88e-65 208
MS.gene003274.t1 MTR_3g092990 37.785 307 177 3 21 326 23 316 1.05e-64 207
MS.gene003274.t1 MTR_4g095450 38.182 330 191 5 1 324 1 323 1.35e-64 207
MS.gene003274.t1 MTR_8g062780 35.220 318 202 3 10 325 9 324 3.32e-63 204
MS.gene003274.t1 MTR_2g008730 45.714 245 125 4 85 325 61 301 6.84e-63 202
MS.gene003274.t1 MTR_7g086870 37.377 305 179 5 22 326 20 312 7.19e-63 202
MS.gene003274.t1 MTR_3g105790 39.934 303 172 4 22 321 23 318 1.55e-62 202
MS.gene003274.t1 MTR_5g033470 36.774 310 187 6 22 325 71 377 5.87e-60 197
MS.gene003274.t1 MTR_2g099175 37.013 308 182 5 23 325 35 335 7.84e-60 196
MS.gene003274.t1 MTR_1g009750 36.970 330 184 8 1 325 1 311 2.85e-59 193
MS.gene003274.t1 MTR_0286s0010 37.013 308 185 7 22 325 32 334 1.32e-58 192
MS.gene003274.t1 MTR_6g008075 37.013 308 185 7 22 325 32 334 1.32e-58 192
MS.gene003274.t1 MTR_2g067440 33.634 333 187 6 22 324 58 386 2.56e-56 188
MS.gene003274.t1 MTR_2g078610 34.835 333 182 7 22 322 74 403 5.81e-55 185
MS.gene003274.t1 MTR_1g066710 33.762 311 195 4 20 327 23 325 6.82e-55 182
MS.gene003274.t1 MTR_2g077990 34.835 333 182 7 22 322 74 403 8.98e-55 184
MS.gene003274.t1 MTR_1g066380 34.084 311 194 4 20 327 23 325 1.71e-54 181
MS.gene003274.t1 MTR_1g066640 34.405 311 193 4 20 327 23 325 2.08e-53 179
MS.gene003274.t1 MTR_1g066680 34.405 311 192 5 20 327 23 324 6.54e-53 177
MS.gene003274.t1 MTR_2g008160 36.977 311 145 9 22 325 22 288 1.34e-52 175
MS.gene003274.t1 MTR_0147s0010 32.710 321 180 4 24 324 77 381 2.95e-52 177
MS.gene003274.t1 MTR_5g074700 42.672 232 108 6 97 325 5 214 4.60e-50 166
MS.gene003274.t1 MTR_2g078280 34.472 322 176 7 22 311 74 392 1.24e-49 171
MS.gene003274.t1 MTR_2g067450 35.505 307 188 7 22 324 9 309 2.00e-49 168
MS.gene003274.t1 MTR_3g072210 43.750 192 99 3 135 325 55 238 2.67e-46 157
MS.gene003274.t1 MTR_3g105790 41.026 234 132 3 91 321 12 242 4.19e-46 157
MS.gene003274.t1 MTR_2g008160 47.024 168 85 3 22 189 22 185 6.95e-46 155
MS.gene003274.t1 MTR_1g066380 34.601 263 161 4 68 327 3 257 3.86e-45 155
MS.gene003274.t1 MTR_4g132110 32.558 301 192 4 28 325 36 328 8.47e-45 156
MS.gene003274.t1 MTR_4g132110 32.026 306 192 5 28 325 36 333 2.18e-42 150
MS.gene003274.t1 MTR_7g072490 37.600 250 93 4 70 319 2 188 6.92e-40 140
MS.gene003274.t1 MTR_3g072260 47.328 131 62 1 11 134 6 136 1.40e-32 119
MS.gene003274.t1 MTR_5g058120 39.877 163 85 4 159 321 6 155 1.86e-27 108
MS.gene003274.t1 MTR_2g029930 57.000 100 15 3 22 107 17 102 1.11e-25 99.4
MS.gene003274.t1 MTR_2g078560 29.204 226 127 4 130 324 96 319 3.26e-25 103
MS.gene003274.t1 MTR_7g086790 31.383 188 107 4 71 258 17 182 1.73e-22 93.6
MS.gene003274.t1 MTR_2g077980 28.058 278 152 10 86 322 11 281 1.55e-21 93.2
MS.gene003274.t1 MTR_1g089005 40.336 119 64 2 24 136 15 132 1.08e-20 87.8
MS.gene003274.t1 MTR_3g462850 35.862 145 84 4 188 326 9 150 1.68e-20 87.0
MS.gene003274.t1 MTR_1g098320 46.591 88 45 1 244 331 45 130 3.11e-20 85.9
MS.gene003274.t1 MTR_4g114220 48.750 80 31 2 51 130 30 99 3.14e-18 80.5
MS.gene003274.t1 MTR_6g048160 53.521 71 29 2 63 133 22 88 5.49e-18 78.2
MS.gene003274.t1 MTR_5g074770 40.860 93 54 1 232 324 17 108 2.36e-16 74.3
MS.gene003274.t1 MTR_4g031040 30.286 175 78 3 83 257 1 131 1.51e-15 73.2
MS.gene003274.t1 MTR_4g012865 47.059 68 36 0 28 95 81 148 6.04e-13 66.2
MS.gene003274.t1 MTR_7g086810 30.894 123 59 1 20 142 2 98 1.26e-12 67.0
MS.gene003274.t1 MTR_7g086785 36.842 76 47 1 67 142 1 75 6.72e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003274.t1 AT5G06720 57.632 321 136 0 6 326 14 334 6.48e-133 382
MS.gene003274.t1 AT5G06730 56.535 329 143 0 6 334 15 343 7.32e-133 383
MS.gene003274.t1 AT2G38380 55.828 326 141 2 3 325 8 333 6.93e-130 375
MS.gene003274.t1 AT4G08770 55.627 311 136 2 21 329 21 331 1.77e-126 366
MS.gene003274.t1 AT3G32980 57.009 321 134 3 12 328 17 337 5.90e-125 363
MS.gene003274.t1 AT3G49120 56.075 321 137 3 12 328 18 338 7.34e-125 362
MS.gene003274.t1 AT2G38390 54.601 326 145 2 3 325 8 333 6.14e-124 360
MS.gene003274.t1 AT4G08780 54.019 311 141 2 21 329 21 331 2.72e-122 356
MS.gene003274.t1 AT3G49110 55.556 324 139 3 7 328 19 339 9.82e-122 355
MS.gene003274.t1 AT2G18140 50.993 302 147 1 24 325 35 335 8.45e-107 316
MS.gene003274.t1 AT5G19890 51.070 327 151 5 1 325 8 327 2.01e-106 315
MS.gene003274.t1 AT2G18150 50.000 300 149 1 26 325 38 336 1.69e-105 313
MS.gene003274.t1 AT4G36430 47.335 319 166 2 9 326 14 331 2.25e-104 310
MS.gene003274.t1 AT5G66390 47.771 314 162 2 12 325 22 333 9.05e-104 308
MS.gene003274.t1 AT5G19880 51.140 307 147 2 22 325 23 329 4.24e-103 306
MS.gene003274.t1 AT1G44970 50.164 305 152 0 21 325 42 346 2.72e-102 305
MS.gene003274.t1 AT1G49570 48.867 309 153 3 18 323 42 348 4.25e-101 302
MS.gene003274.t1 AT3G50990 47.386 306 160 1 22 327 39 343 1.30e-99 298
MS.gene003274.t1 AT1G14550 48.197 305 150 3 22 325 24 321 1.17e-95 287
MS.gene003274.t1 AT5G05340 47.386 306 150 4 22 325 28 324 1.16e-94 285
MS.gene003274.t1 AT1G14540 46.273 322 166 2 4 325 1 315 1.21e-92 279
MS.gene003274.t1 AT1G68850 46.945 311 151 8 24 325 30 335 5.91e-92 278
MS.gene003274.t1 AT4G16270 45.215 303 161 4 24 325 50 348 8.24e-91 276
MS.gene003274.t1 AT5G58390 46.769 325 159 6 6 325 1 316 8.22e-90 272
MS.gene003274.t1 AT2G35380 48.344 302 152 3 28 325 34 335 2.12e-89 271
MS.gene003274.t1 AT5G58400 44.062 320 167 5 9 325 15 325 8.62e-86 262
MS.gene003274.t1 AT3G03670 42.587 317 179 2 9 325 8 321 2.01e-84 258
MS.gene003274.t1 AT2G22420 42.020 307 163 5 24 325 23 319 1.91e-81 251
MS.gene003274.t1 AT2G41480 41.994 331 179 7 1 325 5 328 3.16e-80 248
MS.gene003274.t1 AT1G71695 43.831 308 161 6 24 328 44 342 1.31e-79 247
MS.gene003274.t1 AT5G51890 38.318 321 191 5 6 325 8 322 3.89e-79 245
MS.gene003274.t1 AT4G11290 41.337 329 183 6 4 325 1 326 8.79e-79 244
MS.gene003274.t1 AT5G64120 42.508 327 169 8 9 325 11 328 1.69e-78 243
MS.gene003274.t1 AT3G01190 41.433 321 180 6 6 325 8 321 2.13e-78 243
MS.gene003274.t1 AT5G15180 41.311 305 169 5 24 325 32 329 4.06e-78 243
MS.gene003274.t1 AT5G17820 40.850 306 169 5 20 325 20 313 1.90e-77 240
MS.gene003274.t1 AT5G42180 42.053 302 166 6 24 324 23 316 1.32e-76 238
MS.gene003274.t1 AT5G17820 40.850 306 169 5 20 325 73 366 4.90e-76 238
MS.gene003274.t1 AT4G25980 41.066 319 177 5 12 325 14 326 5.84e-76 237
MS.gene003274.t1 AT1G05260 40.373 322 186 5 7 326 9 326 7.41e-76 236
MS.gene003274.t1 AT4G37530 42.671 307 171 3 22 325 25 329 8.28e-75 234
MS.gene003274.t1 AT5G39580 44.333 300 156 7 28 325 29 319 2.47e-74 233
MS.gene003274.t1 AT3G21770 40.777 309 177 5 16 322 21 325 8.72e-74 231
MS.gene003274.t1 AT4G33420 41.325 317 167 7 15 325 22 325 1.34e-73 231
MS.gene003274.t1 AT4G33420 41.325 317 167 7 15 325 69 372 7.14e-73 230
MS.gene003274.t1 AT2G18980 40.810 321 179 5 9 325 10 323 7.92e-73 229
MS.gene003274.t1 AT1G30870 40.523 306 169 6 24 326 51 346 2.97e-70 223
MS.gene003274.t1 AT1G05240 39.286 308 173 5 24 325 26 325 4.63e-70 222
MS.gene003274.t1 AT1G05250 39.286 308 173 5 24 325 26 325 4.63e-70 222
MS.gene003274.t1 AT4G33870 35.928 334 176 5 24 322 68 398 7.85e-69 221
MS.gene003274.t1 AT4G30170 39.610 308 175 5 22 325 25 325 8.51e-69 218
MS.gene003274.t1 AT5G14130 39.355 310 173 7 22 325 30 330 3.87e-68 217
MS.gene003274.t1 AT4G31760 38.462 325 181 5 13 325 9 326 5.90e-68 216
MS.gene003274.t1 AT5G14130 39.355 310 173 7 22 325 71 371 9.12e-68 217
MS.gene003274.t1 AT5G64100 42.053 302 160 7 28 325 41 331 1.05e-67 216
MS.gene003274.t1 AT5G40150 38.782 312 182 4 16 325 24 328 5.94e-67 214
MS.gene003274.t1 AT3G49960 37.461 323 197 3 6 325 9 329 7.34e-67 214
MS.gene003274.t1 AT4G37520 39.414 307 181 3 22 325 25 329 7.74e-67 213
MS.gene003274.t1 AT2G35380 46.964 247 127 3 83 325 1 247 1.66e-66 210
MS.gene003274.t1 AT3G28200 37.987 308 177 5 22 325 19 316 2.32e-66 212
MS.gene003274.t1 AT5G64110 40.532 301 168 5 28 325 38 330 4.65e-66 211
MS.gene003274.t1 AT5G67400 40.909 308 175 5 22 325 25 329 2.11e-65 210
MS.gene003274.t1 AT4G37530 44.314 255 139 2 22 273 25 279 3.61e-65 207
MS.gene003274.t1 AT4G37520 39.088 307 179 4 22 325 25 326 4.10e-65 209
MS.gene003274.t1 AT2G24800 40.260 308 173 5 22 325 29 329 6.17e-65 209
MS.gene003274.t1 AT2G34060 38.636 308 180 6 21 322 39 343 1.39e-64 208
MS.gene003274.t1 AT5G24070 41.135 282 153 6 51 327 64 337 3.30e-64 207
MS.gene003274.t1 AT1G77100 39.938 323 176 8 11 325 7 319 4.48e-64 206
MS.gene003274.t1 AT4G26010 37.342 316 182 6 11 325 9 309 6.05e-64 205
MS.gene003274.t1 AT4G26010 37.037 324 184 7 5 325 31 337 1.25e-63 206
MS.gene003274.t1 AT2G39040 39.228 311 178 7 22 325 44 350 1.91e-63 205
MS.gene003274.t1 AT2G43480 41.071 280 152 6 51 325 64 335 6.21e-62 201
MS.gene003274.t1 AT5G22410 35.806 310 185 7 18 322 22 322 8.32e-60 195
MS.gene003274.t1 AT1G24110 34.528 307 194 5 22 325 20 322 1.19e-59 195
MS.gene003274.t1 AT5G47000 33.438 317 201 5 12 325 21 330 1.12e-58 192
MS.gene003274.t1 AT1G34510 36.076 316 186 6 11 325 9 309 1.67e-58 191
MS.gene003274.t1 AT4G17690 36.066 305 184 5 24 325 26 322 8.80e-58 190
MS.gene003274.t1 AT3G17070 33.131 329 204 7 7 325 17 339 1.40e-53 179
MS.gene003274.t1 AT2G37130 33.121 314 198 5 16 325 22 327 1.17e-49 169
MS.gene003274.t1 AT4G21960 32.047 337 211 6 1 327 1 329 4.52e-48 165
MS.gene003274.t1 AT2G37130 33.444 302 189 5 28 325 3 296 1.07e-47 163
MS.gene003274.t1 AT4G25980 45.604 182 95 3 12 193 59 236 3.52e-47 161
MS.gene003274.t1 AT3G17070 31.786 280 178 7 52 325 4 276 5.55e-40 142
MS.gene003274.t1 AT5G39580 45.614 171 88 3 28 198 29 194 6.78e-39 138
MS.gene003274.t1 AT2G24800 43.023 172 94 1 22 193 29 196 7.11e-35 128
MS.gene003274.t1 AT1G77490 25.279 269 151 10 58 309 106 341 3.43e-15 76.6
MS.gene003274.t1 AT1G77490 25.279 269 151 10 58 309 106 341 5.11e-15 76.3
MS.gene003274.t1 AT3G42570 29.787 141 86 4 53 191 20 149 2.97e-12 64.3

Find 70 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGTTCCCTGTTCCATTT+TGG 0.151832 2.4:+60168789 None:intergenic
AGGGAACAATCTCACTAATT+TGG 0.252401 2.4:-60168777 MS.gene003274:CDS
TAGGGTGTCCATGATTAAAA+TGG 0.263076 2.4:-60168591 MS.gene003274:CDS
AAGTTGATCCAATGAGAAAA+AGG 0.270141 2.4:+60169645 None:intergenic
AATGAGACTGGCACCAATTC+GGG 0.277255 2.4:+60171798 None:intergenic
CCTCTTAATGAGTTTATGTT+TGG 0.284231 2.4:+60171086 None:intergenic
CACTTTGAAGTAAGCCTTTG+TGG 0.319319 2.4:+60168702 None:intergenic
GCAGATTCCTCTGGATTATC+TGG 0.328156 2.4:-60168506 MS.gene003274:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.4:+60171841 None:intergenic
CGTGAGATATGTCCCCAAAA+TGG 0.335411 2.4:-60168803 MS.gene003274:CDS
CTGGTGATCAAGGGGAAATT+AGG 0.335959 2.4:-60168550 MS.gene003274:CDS
GCCTTTGTGGCTTTGAAGAT+TGG 0.338713 2.4:+60168715 None:intergenic
CATTAAGACTGCACACAAAA+AGG 0.341081 2.4:+60171924 None:intergenic
CATAAACTCATTAAGAGGTT+TGG 0.346112 2.4:-60171081 MS.gene003274:CDS
CAAATTGATTTGGTGTAGTA+AGG 0.382467 2.4:+60168753 None:intergenic
ATGGGTTCCATGAATGTACT+AGG 0.387048 2.4:-60171952 MS.gene003274:CDS
AAAGCTGCATTTCTTGTTCA+AGG 0.391405 2.4:-60169622 MS.gene003274:CDS
CCAAACATAAACTCATTAAG+AGG 0.391730 2.4:-60171086 MS.gene003274:CDS
ATGATTAAAATGGCTAATAT+TGG 0.393103 2.4:-60168581 MS.gene003274:CDS
TCCCTCACTGATCCCCGAAT+TGG 0.403147 2.4:-60171811 MS.gene003274:CDS
TTTATTAATGCAGATTCCTC+TGG 0.406967 2.4:-60168515 MS.gene003274:CDS
GAATTGGTGCCAGTCTCATT+AGG 0.407331 2.4:-60171795 MS.gene003274:CDS
GCTAATATTGGTGTACTAAC+TGG 0.408331 2.4:-60168569 MS.gene003274:CDS
GGCAAATTCCATTGGGAAGA+AGG 0.414683 2.4:-60169717 MS.gene003274:CDS
AATTTGTTGTCAAATTGATT+TGG 0.417521 2.4:+60168743 None:intergenic
TAATGAGACTGGCACCAATT+CGG 0.418061 2.4:+60171797 None:intergenic
ATATGTCCCCAAAATGGAAC+AGG 0.420463 2.4:-60168797 MS.gene003274:CDS
GGTATAGAAATGGACATGTT+TGG 0.432530 2.4:+60171863 None:intergenic
TTATACAATTTCAATAGCAC+TGG 0.440155 2.4:-60168869 MS.gene003274:CDS
GGCCACCCCTAGTACATTCA+TGG 0.444356 2.4:+60171945 None:intergenic
AACACAATAGGGTATAGAAA+TGG 0.446200 2.4:+60171853 None:intergenic
ATGGCAATAGTATCTGCATT+AGG 0.448956 2.4:+60168659 None:intergenic
ATATGACTCTAAACACAATA+GGG 0.454551 2.4:+60171842 None:intergenic
GGTGTACTAACTGGTGATCA+AGG 0.458052 2.4:-60168560 MS.gene003274:CDS
ATACTTGAACAAAGCAATCA+TGG 0.458644 2.4:+60171764 None:intergenic
GTTGTGTTTAGAGTTTGATC+AGG 0.458651 2.4:+60168842 None:intergenic
CCCTCATGGCAAATTCCATT+GGG 0.466184 2.4:-60169724 MS.gene003274:CDS
TGTGCAGTCTTAATGCATGC+TGG 0.471905 2.4:-60171916 MS.gene003274:CDS
TCCCTCATGGCAAATTCCAT+TGG 0.478606 2.4:-60169725 MS.gene003274:CDS
AGCTCAAGTAGCTTCTGTTC+TGG 0.481365 2.4:-60170979 MS.gene003274:intron
AATTCTCAAAGAAGAGAGCT+TGG 0.499261 2.4:+60168615 None:intergenic
TGTCCAGGTGCTCATACGTT+CGG 0.501965 2.4:-60168923 MS.gene003274:intron
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.4:-60169589 MS.gene003274:intron
CCCAATGGAATTTGCCATGA+GGG 0.510090 2.4:+60169724 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.4:-60171836 MS.gene003274:CDS
CATGTTTGGCTGTAAAATGA+AGG 0.525454 2.4:+60171877 None:intergenic
GTGTACTAACTGGTGATCAA+GGG 0.539547 2.4:-60168559 MS.gene003274:CDS
TTGGTTTATGAACAGGGAGG+AGG 0.539593 2.4:-60169748 MS.gene003274:intron
AAACTATCCCTTCTTCCCAA+TGG 0.540488 2.4:+60169709 None:intergenic
AAGCTGCATTTCTTGTTCAA+GGG 0.544571 2.4:-60169621 MS.gene003274:CDS
TTCCATGAATGTACTAGGGG+TGG 0.544977 2.4:-60171947 MS.gene003274:CDS
TGGGTTCCATGAATGTACTA+GGG 0.550297 2.4:-60171951 MS.gene003274:CDS
GCAAATTCCATTGGGAAGAA+GGG 0.554150 2.4:-60169716 MS.gene003274:CDS
GAAATGAAGCCTAATGAGAC+TGG 0.563857 2.4:+60171786 None:intergenic
GTGCAGTCTTAATGCATGCT+GGG 0.565360 2.4:-60171915 MS.gene003274:CDS
ACCAATTCGGGGATCAGTGA+GGG 0.574096 2.4:+60171810 None:intergenic
TGTTTGTGACAGGGTTGCGA+TGG 0.579435 2.4:-60171161 MS.gene003274:intron
TCAGCACAAGAAACAGTGGC+TGG 0.593952 2.4:+60171017 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.4:-60169738 MS.gene003274:intron
TCCAATCTTCAAAGCCACAA+AGG 0.630443 2.4:-60168716 MS.gene003274:CDS
ATGAGACTGGCACCAATTCG+GGG 0.640565 2.4:+60171799 None:intergenic
ACTACTAAAGCTATTAACAA+TGG 0.641189 2.4:+60168640 None:intergenic
GATTCCTCTGGATTATCTGG+TGG 0.641989 2.4:-60168503 MS.gene003274:CDS
TGTACTAACTGGTGATCAAG+GGG 0.649642 2.4:-60168558 MS.gene003274:CDS
AATATCAGCACAAGAAACAG+TGG 0.657026 2.4:+60171013 None:intergenic
CACCAATTCGGGGATCAGTG+AGG 0.657501 2.4:+60171809 None:intergenic
GGGTTCCATGAATGTACTAG+GGG 0.674090 2.4:-60171950 MS.gene003274:CDS
TCCCAATGGAATTTGCCATG+AGG 0.679713 2.4:+60169723 None:intergenic
TATGTCCCCAAAATGGAACA+GGG 0.733433 2.4:-60168796 MS.gene003274:CDS
TGCACCACCAGATAATCCAG+AGG 0.739615 2.4:+60168499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATATATATATAAAAGG+GGG + chr2.4:60170357-60170376 None:intergenic 10.0%
!! GAATTATATATATATAAAAG+GGG + chr2.4:60170358-60170377 None:intergenic 10.0%
!!! ACTAATATAAATAATTTGTT+TGG - chr2.4:60169975-60169994 MS.gene003274:intron 10.0%
!!! ATTATTTTTAGTATATATGT+AGG + chr2.4:60169849-60169868 None:intergenic 10.0%
!!! TTTTTTTTTTTAAAAATAGC+AGG - chr2.4:60169545-60169564 MS.gene003274:intron 10.0%
!! AATTTGAAGATAATTTACAT+CGG + chr2.4:60171068-60171087 None:intergenic 15.0%
!! TAAACTAGTAACTAATATAT+TGG - chr2.4:60170654-60170673 MS.gene003274:intron 15.0%
!!! AAAAAAAAATCGATTTACAT+TGG + chr2.4:60171211-60171230 None:intergenic 15.0%
!!! AAAAATGTTTGTTTTTACAA+TGG - chr2.4:60171179-60171198 MS.gene003274:intron 15.0%
!!! AACTTTTTATTAAACTTTGT+TGG + chr2.4:60171293-60171312 None:intergenic 15.0%
!!! AGTTTTATAGTGATAATTTT+GGG - chr2.4:60169721-60169740 MS.gene003274:CDS 15.0%
!!! ATTAAGTAGATAAAAACTTT+TGG - chr2.4:60170123-60170142 MS.gene003274:intron 15.0%
!!! TAGTTTTATAGTGATAATTT+TGG - chr2.4:60169720-60169739 MS.gene003274:CDS 15.0%
!!! TTAAGTAGATAAAAACTTTT+GGG - chr2.4:60170124-60170143 MS.gene003274:intron 15.0%
!!! TTTTGTGTGTATTTATTTTT+TGG - chr2.4:60170276-60170295 MS.gene003274:intron 15.0%
!! AATAACCAAAATTATTGTAG+TGG + chr2.4:60168794-60168813 None:intergenic 20.0%
!! AGAAATCATGATCTATATAT+AGG + chr2.4:60168724-60168743 None:intergenic 20.0%
!! AGAATACAGAAAAATAAAAG+TGG + chr2.4:60170603-60170622 None:intergenic 20.0%
!! ATGATTAAAATGGCTAATAT+TGG - chr2.4:60171840-60171859 MS.gene003274:CDS 20.0%
!! GTAATCAATGAATTAATATC+TGG - chr2.4:60169573-60169592 MS.gene003274:intron 20.0%
!! TACAAAATTGTTAGAATTTC+AGG + chr2.4:60171476-60171495 None:intergenic 20.0%
!! TTAATCATAACCGATATAAA+AGG + chr2.4:60171149-60171168 None:intergenic 20.0%
!!! AAATTAAAGTGGATTGTATT+AGG + chr2.4:60168764-60168783 None:intergenic 20.0%
!!! AAGTTTTTATCTACTTAATG+TGG + chr2.4:60170122-60170141 None:intergenic 20.0%
!!! AATATATTGGTTTATGAACA+GGG - chr2.4:60170667-60170686 MS.gene003274:intron 20.0%
!!! AATATTAGCCATTTTAATCA+TGG + chr2.4:60171841-60171860 None:intergenic 20.0%
!!! AATTTGTTGTCAAATTGATT+TGG + chr2.4:60171681-60171700 None:intergenic 20.0%
!!! AGTTTTTATCTACTTAATGT+GGG + chr2.4:60170121-60170140 None:intergenic 20.0%
!!! ATTTTATTGTTTTCTTTTGC+AGG - chr2.4:60169688-60169707 MS.gene003274:CDS 20.0%
!!! TAATATATTGGTTTATGAAC+AGG - chr2.4:60170666-60170685 MS.gene003274:intron 20.0%
!!! TAATTAATGTTCTAAGAGAA+TGG + chr2.4:60169606-60169625 None:intergenic 20.0%
!!! TATTAGTTACTAGTTTAAGA+TGG + chr2.4:60170651-60170670 None:intergenic 20.0%
!!! TCGATTTTTTTTTTGTACAA+CGG - chr2.4:60171218-60171237 MS.gene003274:intron 20.0%
!!! TGGTGAACATTTTTTTTTTT+GGG + chr2.4:60171273-60171292 None:intergenic 20.0%
!!! TTATTTTTATTTTGACGAAC+AGG - chr2.4:60169810-60169829 MS.gene003274:intron 20.0%
!!! TTGGTGAACATTTTTTTTTT+TGG + chr2.4:60171274-60171293 None:intergenic 20.0%
!!! TTTTATCTATATAACTAGCT+AGG + chr2.4:60169506-60169525 None:intergenic 20.0%
!!! TTTTATTGTTTTCTTTTGCA+GGG - chr2.4:60169689-60169708 MS.gene003274:CDS 20.0%
!!! TTTTTGTATGTTTTGTTTTC+AGG + chr2.4:60169936-60169955 None:intergenic 20.0%
! AATATGACTCTAAACACAAT+AGG + chr2.4:60168583-60168602 None:intergenic 25.0%
! ACTACTAAAGCTATTAACAA+TGG + chr2.4:60171784-60171803 None:intergenic 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.4:60168582-60168601 None:intergenic 25.0%
! TAAGACTTAAACCAATAGTA+AGG + chr2.4:60170509-60170528 None:intergenic 25.0%
! TACAATAAGAGAATCTACAT+CGG + chr2.4:60171013-60171032 None:intergenic 25.0%
! TTATACAATTTCAATAGCAC+TGG - chr2.4:60171552-60171571 MS.gene003274:intron 25.0%
!! AAATCGATTTACATTGGTTA+AGG + chr2.4:60171205-60171224 None:intergenic 25.0%
!! ATGAACCACTACAATAATTT+TGG - chr2.4:60168786-60168805 MS.gene003274:CDS 25.0%
!! ATTGTGTTACTGAAAAAACA+TGG - chr2.4:60169121-60169140 MS.gene003274:intron 25.0%
!! CATAGATTTTTGTCTTTTAG+TGG - chr2.4:60169192-60169211 MS.gene003274:intron 25.0%
!! TAACAATTTTGTATATGTCC+AGG - chr2.4:60171483-60171502 MS.gene003274:intron 25.0%
!! TATATAGGAAGAGCTTTATA+TGG + chr2.4:60168709-60168728 None:intergenic 25.0%
!! TTGAAAGTGACCTTTTATAT+CGG - chr2.4:60171136-60171155 MS.gene003274:CDS 25.0%
!!! ACTATTGGTTTAAGTCTTAA+CGG - chr2.4:60170510-60170529 MS.gene003274:intron 25.0%
!!! ACTGATGGATTTTTCTATAA+CGG + chr2.4:60169017-60169036 None:intergenic 25.0%
!!! ATTAGCTTTAGTCAAACAAA+AGG + chr2.4:60170032-60170051 None:intergenic 25.0%
!!! TCTCTTCTTTGAGAATTTTA+GGG - chr2.4:60171812-60171831 MS.gene003274:CDS 25.0%
!!! TTTTTTTTTGGGTACAATGT+TGG + chr2.4:60171262-60171281 None:intergenic 25.0%
AACACAATAGGGTATAGAAA+TGG + chr2.4:60168571-60168590 None:intergenic 30.0%
AACGTCAATAAAGTTACTGA+CGG - chr2.4:60168906-60168925 MS.gene003274:CDS 30.0%
ACAATAAGAGAATCTACATC+GGG + chr2.4:60171012-60171031 None:intergenic 30.0%
ACATGCATAAACAACAACTT+TGG + chr2.4:60169243-60169262 None:intergenic 30.0%
AGTTGATCCAATGAGAAAAA+GGG + chr2.4:60170778-60170797 None:intergenic 30.0%
ATACTTGAACAAAGCAATCA+TGG + chr2.4:60168660-60168679 None:intergenic 30.0%
ATCTGATGAAGAATTACTGA+GGG - chr2.4:60168956-60168975 MS.gene003274:intron 30.0%
ATGATACTTGAAACTACTAC+TGG - chr2.4:60169653-60169672 MS.gene003274:CDS 30.0%
CATAAACTCATTAAGAGGTT+TGG - chr2.4:60169340-60169359 MS.gene003274:intron 30.0%
CCAAACATAAACTCATTAAG+AGG - chr2.4:60169335-60169354 MS.gene003274:intron 30.0%
CCTCTTAATGAGTTTATGTT+TGG + chr2.4:60169338-60169357 None:intergenic 30.0%
GATTCTCTTATTGTAGAATG+TGG - chr2.4:60171018-60171037 MS.gene003274:CDS 30.0%
GTGGTTCATTCAAATTAAAG+TGG + chr2.4:60168775-60168794 None:intergenic 30.0%
GTTCAACTCAAATACTAATC+CGG + chr2.4:60170483-60170502 None:intergenic 30.0%
TGCTCACTAAAATAATTGAC+AGG - chr2.4:60169777-60169796 MS.gene003274:intron 30.0%
TTCATGTGCACTACATTAAT+TGG + chr2.4:60169061-60169080 None:intergenic 30.0%
TTTATTAATGCAGATTCCTC+TGG - chr2.4:60171906-60171925 MS.gene003274:CDS 30.0%
TTTCCTTCAGTAATTACTGA+CGG - chr2.4:60168982-60169001 MS.gene003274:intron 30.0%
! AAGTTGATCCAATGAGAAAA+AGG + chr2.4:60170779-60170798 None:intergenic 30.0%
! AATACACATTACTGGCTAAT+CGG - chr2.4:60168857-60168876 MS.gene003274:CDS 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.4:60168585-60168604 MS.gene003274:CDS 30.0%
!! CAAATTGATTTGGTGTAGTA+AGG + chr2.4:60171671-60171690 None:intergenic 30.0%
!! CTCTCTTCTTTGAGAATTTT+AGG - chr2.4:60171811-60171830 MS.gene003274:CDS 30.0%
!! GCTAATGTTGAACTTGTTAA+AGG - chr2.4:60170046-60170065 MS.gene003274:intron 30.0%
!! TTTCTTGCCTCTTTGATTTT+TGG - chr2.4:60170238-60170257 MS.gene003274:intron 30.0%
!!! AGATAAAAACTTTTGGGTTG+TGG - chr2.4:60170130-60170149 MS.gene003274:intron 30.0%
!!! AGGTGTTTTCTTTTGGTTTT+GGG - chr2.4:60170213-60170232 MS.gene003274:intron 30.0%
!!! ATAAAAACTTTTGGGTTGTG+GGG - chr2.4:60170132-60170151 MS.gene003274:intron 30.0%
!!! GATAAAAACTTTTGGGTTGT+GGG - chr2.4:60170131-60170150 MS.gene003274:intron 30.0%
!!! TTCTTGTTTTACGATACTGA+TGG + chr2.4:60169032-60169051 None:intergenic 30.0%
AAAGCTGCATTTCTTGTTCA+AGG - chr2.4:60170799-60170818 MS.gene003274:intron 35.0%
AAGCTGCATTTCTTGTTCAA+GGG - chr2.4:60170800-60170819 MS.gene003274:intron 35.0%
AATATCAGCACAAGAAACAG+TGG + chr2.4:60169411-60169430 None:intergenic 35.0%
AATTCTCAAAGAAGAGAGCT+TGG + chr2.4:60171809-60171828 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.4:60170832-60170851 MS.gene003274:intron 35.0%
ACATCCACCAAAAATCAAAG+AGG + chr2.4:60170248-60170267 None:intergenic 35.0%
ACCAGCAGTTAAGACTTATA+TGG - chr2.4:60170577-60170596 MS.gene003274:intron 35.0%
AGGGAACAATCTCACTAATT+TGG - chr2.4:60171644-60171663 MS.gene003274:intron 35.0%
AGTTGAACTCTCCTTACTAT+TGG - chr2.4:60170495-60170514 MS.gene003274:intron 35.0%
ATGGCAATAGTATCTGCATT+AGG + chr2.4:60171765-60171784 None:intergenic 35.0%
ATTCCGTCAGTAATTACTGA+AGG + chr2.4:60168988-60169007 None:intergenic 35.0%
CAAAAGGTTCAACATTAGCT+AGG + chr2.4:60170016-60170035 None:intergenic 35.0%
CATGTTTGGCTGTAAAATGA+AGG + chr2.4:60168547-60168566 None:intergenic 35.0%
CATTAAGACTGCACACAAAA+AGG + chr2.4:60168500-60168519 None:intergenic 35.0%
CCAGTAATGTGTATTACTGA+GGG + chr2.4:60168852-60168871 None:intergenic 35.0%
GATCTGATGAAGAATTACTG+AGG - chr2.4:60168955-60168974 MS.gene003274:intron 35.0%
GCTAATATTGGTGTACTAAC+TGG - chr2.4:60171852-60171871 MS.gene003274:CDS 35.0%
GGTATAGAAATGGACATGTT+TGG + chr2.4:60168561-60168580 None:intergenic 35.0%
GGTTTAAGTCTTAACTTTCG+TGG + chr2.4:60170560-60170579 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.4:60169251-60169270 MS.gene003274:intron 35.0%
TAGCTAAAATTGAACCCCAT+TGG - chr2.4:60169877-60169896 MS.gene003274:intron 35.0%
TCAAATACTAATCCGGTAGA+TGG + chr2.4:60170476-60170495 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.4:60169250-60169269 MS.gene003274:intron 35.0%
TTGATCTGATCAAAGCCAAT+GGG + chr2.4:60169895-60169914 None:intergenic 35.0%
TTGGTTTAAGTCTTAACGGT+TGG - chr2.4:60170514-60170533 MS.gene003274:intron 35.0%
! ATTGTTCCCTGTTCCATTTT+GGG + chr2.4:60171634-60171653 None:intergenic 35.0%
! GTTGTGTTTAGAGTTTGATC+AGG + chr2.4:60171582-60171601 None:intergenic 35.0%
! TAGGGTGTCCATGATTAAAA+TGG - chr2.4:60171830-60171849 MS.gene003274:CDS 35.0%
!! AAAGTGGATTGTATTAGGTC+TGG + chr2.4:60168759-60168778 None:intergenic 35.0%
!! AGTGATAATTTTGGGTAACG+AGG - chr2.4:60169729-60169748 MS.gene003274:CDS 35.0%
!! ATATTGGTTTATGAACAGGG+AGG - chr2.4:60170670-60170689 MS.gene003274:intron 35.0%
!! GATGGATTTTTCTATAACGG+CGG + chr2.4:60169014-60169033 None:intergenic 35.0%
!! GCACTTTTGTTGTACTGTTT+GGG - chr2.4:60170325-60170344 MS.gene003274:intron 35.0%
!! TGCACTTTTGTTGTACTGTT+TGG - chr2.4:60170324-60170343 MS.gene003274:intron 35.0%
!!! ATTTTTTGGTGTACCTCTCT+AGG - chr2.4:60170290-60170309 MS.gene003274:intron 35.0%
!!! GAGGTGTTTTCTTTTGGTTT+TGG - chr2.4:60170212-60170231 MS.gene003274:intron 35.0%
!!! GGTGTTTTCTTTTGGTTTTG+GGG - chr2.4:60170214-60170233 MS.gene003274:intron 35.0%
!!! GTGTTTTCTTTTGGTTTTGG+GGG - chr2.4:60170215-60170234 MS.gene003274:intron 35.0%
!!! TGGAAGGTTTTGATTTGCAA+GGG + chr2.4:60170752-60170771 None:intergenic 35.0%
!!! TTTTTTGGTGTACCTCTCTA+GGG - chr2.4:60170291-60170310 MS.gene003274:intron 35.0%
AAACTATCCCTTCTTCCCAA+TGG + chr2.4:60170715-60170734 None:intergenic 40.0%
ATATGTCCCCAAAATGGAAC+AGG - chr2.4:60171624-60171643 MS.gene003274:intron 40.0%
ATGGGTTCCATGAATGTACT+AGG - chr2.4:60168469-60168488 MS.gene003274:CDS 40.0%
ATTAGACACTTTCTTGTCCC+TGG - chr2.4:60171085-60171104 MS.gene003274:CDS 40.0%
CCCTCAGTAATACACATTAC+TGG - chr2.4:60168849-60168868 MS.gene003274:CDS 40.0%
GAAATGAAGCCTAATGAGAC+TGG + chr2.4:60168638-60168657 None:intergenic 40.0%
GCAAATTCCATTGGGAAGAA+GGG - chr2.4:60170705-60170724 MS.gene003274:intron 40.0%
GCCAGTAATGTGTATTACTG+AGG + chr2.4:60168853-60168872 None:intergenic 40.0%
GCCATATAAGTCTTAACTGC+TGG + chr2.4:60170581-60170600 None:intergenic 40.0%
GTGTACTAACTGGTGATCAA+GGG - chr2.4:60171862-60171881 MS.gene003274:CDS 40.0%
GTTGATCTGATCAAAGCCAA+TGG + chr2.4:60169896-60169915 None:intergenic 40.0%
TAATGAGACTGGCACCAATT+CGG + chr2.4:60168627-60168646 None:intergenic 40.0%
TATGTCCCCAAAATGGAACA+GGG - chr2.4:60171625-60171644 MS.gene003274:intron 40.0%
TCCAATCTTCAAAGCCACAA+AGG - chr2.4:60171705-60171724 MS.gene003274:intron 40.0%
TGATCTGATCAAAGCCAATG+GGG + chr2.4:60169894-60169913 None:intergenic 40.0%
TGGGTTCCATGAATGTACTA+GGG - chr2.4:60168470-60168489 MS.gene003274:CDS 40.0%
TGTACTAACTGGTGATCAAG+GGG - chr2.4:60171863-60171882 MS.gene003274:CDS 40.0%
TTAGACACTTTCTTGTCCCT+GGG - chr2.4:60171086-60171105 MS.gene003274:CDS 40.0%
! GATTGTTCCCTGTTCCATTT+TGG + chr2.4:60171635-60171654 None:intergenic 40.0%
! TTACTGACGGAATTTTCCCT+CGG - chr2.4:60168919-60168938 MS.gene003274:CDS 40.0%
! TTGTTCCCTGTTCCATTTTG+GGG + chr2.4:60171633-60171652 None:intergenic 40.0%
!! AACTTGTTAAAGGAGCGTCT+AGG - chr2.4:60170056-60170075 MS.gene003274:intron 40.0%
!! CACTTTGAAGTAAGCCTTTG+TGG + chr2.4:60171722-60171741 None:intergenic 40.0%
!! CTTGCCTCTTTGATTTTTGG+TGG - chr2.4:60170241-60170260 MS.gene003274:intron 40.0%
!! TTTTTGGTGTACCTCTCTAG+GGG - chr2.4:60170292-60170311 MS.gene003274:intron 40.0%
!!! CTGGAAGGTTTTGATTTGCA+AGG + chr2.4:60170753-60170772 None:intergenic 40.0%
!!! GATTTTTGGTGGATGTAGCT+TGG - chr2.4:60170252-60170271 MS.gene003274:intron 40.0%
AAAACACCTCCTCGACAAAC+CGG + chr2.4:60170202-60170221 None:intergenic 45.0%
AATGAGACTGGCACCAATTC+GGG + chr2.4:60168626-60168645 None:intergenic 45.0%
AGCTCAAGTAGCTTCTGTTC+TGG - chr2.4:60169442-60169461 MS.gene003274:intron 45.0%
ATCACTCACTCCATTACCGA+GGG + chr2.4:60168938-60168957 None:intergenic 45.0%
CAACAAAAAGACCCCTAGAG+AGG + chr2.4:60170306-60170325 None:intergenic 45.0%
CCCAATGGAATTTGCCATGA+GGG + chr2.4:60170700-60170719 None:intergenic 45.0%
CCCTCATGGCAAATTCCATT+GGG - chr2.4:60170697-60170716 MS.gene003274:intron 45.0%
CGTGAGATATGTCCCCAAAA+TGG - chr2.4:60171618-60171637 MS.gene003274:intron 45.0%
CTGGTGATCAAGGGGAAATT+AGG - chr2.4:60171871-60171890 MS.gene003274:CDS 45.0%
GATTCCTCTGGATTATCTGG+TGG - chr2.4:60171918-60171937 MS.gene003274:CDS 45.0%
GCAGATTCCTCTGGATTATC+TGG - chr2.4:60171915-60171934 MS.gene003274:CDS 45.0%
GGATATGTCGTACGTGAGAA+GGG + chr2.4:60170630-60170649 None:intergenic 45.0%
GGCAAATTCCATTGGGAAGA+AGG - chr2.4:60170704-60170723 MS.gene003274:intron 45.0%
GGGTTCCATGAATGTACTAG+GGG - chr2.4:60168471-60168490 MS.gene003274:CDS 45.0%
GGTGTACTAACTGGTGATCA+AGG - chr2.4:60171861-60171880 MS.gene003274:CDS 45.0%
GTGCAGTCTTAATGCATGCT+GGG - chr2.4:60168506-60168525 MS.gene003274:CDS 45.0%
TAGACACTTTCTTGTCCCTG+GGG - chr2.4:60171087-60171106 MS.gene003274:CDS 45.0%
TCCCAATGGAATTTGCCATG+AGG + chr2.4:60170701-60170720 None:intergenic 45.0%
TCCCTCATGGCAAATTCCAT+TGG - chr2.4:60170696-60170715 MS.gene003274:intron 45.0%
TGGATATGTCGTACGTGAGA+AGG + chr2.4:60170631-60170650 None:intergenic 45.0%
TGTGCAGTCTTAATGCATGC+TGG - chr2.4:60168505-60168524 MS.gene003274:CDS 45.0%
TTCCATGAATGTACTAGGGG+TGG - chr2.4:60168474-60168493 MS.gene003274:CDS 45.0%
TTGGTTTATGAACAGGGAGG+AGG - chr2.4:60170673-60170692 MS.gene003274:intron 45.0%
! ACGGAATTTTCCCTCGGTAA+TGG - chr2.4:60168925-60168944 MS.gene003274:intron 45.0%
! CTTTCAATTTTCCAGCGTCG+AGG + chr2.4:60171123-60171142 None:intergenic 45.0%
! TCCAATGAGAAAAAGGGTGC+TGG + chr2.4:60170772-60170791 None:intergenic 45.0%
! TCCAGCACCCTTTTTCTCAT+TGG - chr2.4:60170768-60170787 MS.gene003274:intron 45.0%
!! AAAGGAGCGTCTAGGATTCA+TGG - chr2.4:60170064-60170083 MS.gene003274:intron 45.0%
!! ATGAGAAAAAGGGTGCTGGA+AGG + chr2.4:60170768-60170787 None:intergenic 45.0%
!! GAATTGGTGCCAGTCTCATT+AGG - chr2.4:60168626-60168645 MS.gene003274:CDS 45.0%
!! GCCTTTGTGGCTTTGAAGAT+TGG + chr2.4:60171709-60171728 None:intergenic 45.0%
!!! GGTTTTGATTTGCAAGGGCT+TGG + chr2.4:60170747-60170766 None:intergenic 45.0%
!!! GTCGAGGAGGTGTTTTCTTT+TGG - chr2.4:60170206-60170225 MS.gene003274:intron 45.0%
!! AGAATTATATATATATAAAA+GGG + chr2.4:60170359-60170378 None:intergenic 5.0%
!! TAGAATTATATATATATAAA+AGG + chr2.4:60170360-60170379 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+TGG + chr2.4:60170388-60170407 None:intergenic 5.0%
ACCAATTCGGGGATCAGTGA+GGG + chr2.4:60168614-60168633 None:intergenic 50.0%
ATGAGACTGGCACCAATTCG+GGG + chr2.4:60168625-60168644 None:intergenic 50.0%
CGAGGTGAAAAATGACCCCA+GGG + chr2.4:60171105-60171124 None:intergenic 50.0%
CGGTAGATGGAAGAGTCTCA+CGG + chr2.4:60170463-60170482 None:intergenic 50.0%
CGTGAGACTCTTCCATCTAC+CGG - chr2.4:60170461-60170480 MS.gene003274:intron 50.0%
GATCACTCACTCCATTACCG+AGG + chr2.4:60168939-60168958 None:intergenic 50.0%
TCAGCACAAGAAACAGTGGC+TGG + chr2.4:60169407-60169426 None:intergenic 50.0%
TCGAGGTGAAAAATGACCCC+AGG + chr2.4:60171106-60171125 None:intergenic 50.0%
TGCACCACCAGATAATCCAG+AGG + chr2.4:60171925-60171944 None:intergenic 50.0%
TGTCCAGGTGCTCATACGTT+CGG - chr2.4:60171498-60171517 MS.gene003274:intron 50.0%
TGTTTGTGACAGGGTTGCGA+TGG - chr2.4:60169260-60169279 MS.gene003274:intron 50.0%
!!! AACTTTTGGGTTGTGGGGTC+TGG - chr2.4:60170137-60170156 MS.gene003274:intron 50.0%
!!! GTCATTTTTCACCTCGACGC+TGG - chr2.4:60171109-60171128 MS.gene003274:CDS 50.0%
ACACCACTACACCCCAACGA+AGG + chr2.4:60170164-60170183 None:intergenic 55.0%
CACCAATTCGGGGATCAGTG+AGG + chr2.4:60168615-60168634 None:intergenic 55.0%
CTTCCGAACGTATGAGCACC+TGG + chr2.4:60171504-60171523 None:intergenic 55.0%
GGCCACCCCTAGTACATTCA+TGG + chr2.4:60168479-60168498 None:intergenic 55.0%
TCCCTCACTGATCCCCGAAT+TGG - chr2.4:60168610-60168629 MS.gene003274:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.4:60170683-60170702 MS.gene003274:intron 60.0%
ACCTCCTCGACAAACCGGAC+AGG + chr2.4:60170197-60170216 None:intergenic 60.0%
CTCGACAAACCGGACAGGAG+CGG + chr2.4:60170192-60170211 None:intergenic 60.0%
GGTCCTTCGTTGGGGTGTAG+TGG - chr2.4:60170158-60170177 MS.gene003274:intron 60.0%
GTGGGGTCTGGTCCTTCGTT+GGG - chr2.4:60170149-60170168 MS.gene003274:intron 60.0%
TGGGGTCTGGTCCTTCGTTG+GGG - chr2.4:60170150-60170169 MS.gene003274:intron 60.0%
TGTGGGGTCTGGTCCTTCGT+TGG - chr2.4:60170148-60170167 MS.gene003274:intron 60.0%
! TCCTGTCCGGTTTGTCGAGG+AGG - chr2.4:60170193-60170212 MS.gene003274:intron 60.0%
GTGTGTCAGCCGCTCCTGTC+CGG - chr2.4:60170180-60170199 MS.gene003274:intron 65.0%
! CGCTCCTGTCCGGTTTGTCG+AGG - chr2.4:60170190-60170209 MS.gene003274:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 60168469 60171974 60168469 ID=MS.gene003274
chr2.4 mRNA 60168469 60171974 60168469 ID=MS.gene003274.t1;Parent=MS.gene003274
chr2.4 exon 60171768 60171974 60171768 ID=MS.gene003274.t1.exon1;Parent=MS.gene003274.t1
chr2.4 CDS 60171768 60171974 60171768 ID=cds.MS.gene003274.t1;Parent=MS.gene003274.t1
chr2.4 exon 60170980 60171171 60170980 ID=MS.gene003274.t1.exon2;Parent=MS.gene003274.t1
chr2.4 CDS 60170980 60171171 60170980 ID=cds.MS.gene003274.t1;Parent=MS.gene003274.t1
chr2.4 exon 60169590 60169755 60169590 ID=MS.gene003274.t1.exon3;Parent=MS.gene003274.t1
chr2.4 CDS 60169590 60169755 60169590 ID=cds.MS.gene003274.t1;Parent=MS.gene003274.t1
chr2.4 exon 60168469 60168938 60168469 ID=MS.gene003274.t1.exon4;Parent=MS.gene003274.t1
chr2.4 CDS 60168469 60168938 60168469 ID=cds.MS.gene003274.t1;Parent=MS.gene003274.t1
Gene Sequence

>MS.gene003274

ATGGGTTCCATGAATGTACTAGGGGTGGCCTTTTTGTGTGCAGTCTTAATGCATGCTGGGTATGCTCAGCTTAATCCTTCATTTTACAGCCAAACATGTCCATTTCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATTGGTGCCAGTCTCATTAGGCTTCATTTCCATGATTGCTTTGTTCAAGTATGTTATTGTTAATTACTTTTTGTTCATCCATATAAAGCTCTTCCTATATATAGATCATGATTTCTAATTTTCTTATACCAGACCTAATACAATCCACTTTAATTTGAATGAACCACTACAATAATTTTGGTTATTATTGACGAAATTAATCTCTCAGTAATGAATCAAATCCCTCAGTAATACACATTACTGGCTAATCGGTGACAAAAAATTCTTTCAGTAATACTAACGTCAATAAAGTTACTGACGGAATTTTCCCTCGGTAATGGAGTGAGTGATCTGATGAAGAATTACTGAGGGATTTTTCCTTCAGTAATTACTGACGGAATAGTCCGCCGTTATAGAAAAATCCATCAGTATCGTAAAACAAGAAATTCAACCAATTAATGTAGTGCACATGAACACTACAATGTAAATTTTTGTTTTTAGTTAAAATTTTAAAATTGTGTTACTGAAAAAACATGGTGTTGAAAAAGTTTGTAAGAAAGATCTTTCTTTAAAGTAGTGTGTTTGCATAGATTTTTGTCTTTTAGTGGTAAAGACACAAATGAAAATCTTATACCAAAGTTGTTGTTTATGCATGTTTGTGACAGGGTTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACATAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAAATGAATGTCCAGCCACTGTTTCTTGTGCTGATATTCTTACTATTGCAGCTCAAGTAGCTTCTGTTCTGGTATGTTTTATCATTAATTTCATCAACTTTTTTTAATTACCTAGCTAGTTATATAGATAAAATAATTACAAATATTTATTTTTTTTTTTTTTAAAAATAGCAGGAGCTAGTAATCAATGAATTAATATCTGGAAAATTTCCATTCTCTTAGAACATTAATTAATGTATATAGTTAATTATCAATCATACATGATACTTGAAACTACTACTGGCAATATGAAATAATTTTATTGTTTTCTTTTGCAGGGTGAATTTTTAGTTTTATAGTGATAATTTTGGGTAACGAGGAATAGTTTGACTAATTAATCTATTTTGCTCACTAAAATAATTGACAGGATCTCAATTTTTATTTTTATTTTGACGAACAGGATCTCAACTTGATCCTACATATATACTAAAAATAATGAATGTCATAGCTAAAATTGAACCCCATTGGCTTTGATCAGATCAACAAATGAGCAAAAGTTGACCTGAAAACAAAACATACAAAAAAAAGTACATTTGATCATCAACTAATATAAATAATTTGTTTGGACTCTAATAATCACGCCTAGCTAATGTTGAACCTTTTGTTTGACTAAAGCTAATGTTGAACTTGTTAAAGGAGCGTCTAGGATTCATGGTGTTCTAAGTTTAAATATGTTAAGTTAAATTCCCACATTAAGTAGATAAAAACTTTTGGGTTGTGGGGTCTGGTCCTTCGTTGGGGTGTAGTGGTGTGTCAGCCGCTCCTGTCCGGTTTGTCGAGGAGGTGTTTTCTTTTGGTTTTGGGGGTTTCTTGCCTCTTTGATTTTTGGTGGATGTAGCTTGGTTTTTGTGTGTATTTATTTTTTGGTGTACCTCTCTAGGGGTCTTTTTGTTGCACTTTTGTTGTACTGTTTGGGTCTTTACCCCCTTTTATATATATATAATTCTATTTTGCCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGATAAAAACTTTTAATATGATAAAATTAAGCCGTGAGACTCTTCCATCTACCGGATTAGTATTTGAGTTGAACTCTCCTTACTATTGGTTTAAGTCTTAACGGTTGGTCATTTTATTGAGAATTGAACCACGAAAGTTAAGACTTAAACCAGCAGTTAAGACTTATATGGCCACTTTTATTTTTCTGTATTCTTTTTCCCTTCTCACGTACGACATATCCATCTTAAACTAGTAACTAATATATTGGTTTATGAACAGGGAGGAGGTCCCTCATGGCAAATTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACCAAGCCCTTGCAAATCAAAACCTTCCAGCACCCTTTTTCTCATTGGATCAACTTAAAGCTGCATTTCTTGTTCAAGGGCTCAACACTACAGATTTAGTTACACTCTCAGGTATTGAATATGATCATTTTCATACTTACGAACAATTTAATAGAAAAGCTTTACGCATGCATCAAATCATATATTATGATGTCGCAATTCACTATACACTAATACATAATGACTTTTTACACTAGCTAAAATTGAATTTTTAAATCGATTTTGAACCCGATGTAGATTCTCTTATTGTAGAATGTGGTCACGTTTTACATCAATTATTCAACCGATGTAAATTATCTTCAAATTAGACACTTTCTTGTCCCTGGGGTCATTTTTCACCTCGACGCTGGAAAATTGAAAGTGACCTTTTATATCGGTTATGATTAAAATCGATGTGAAAAATGTTTGTTTTTACAATGGCCTTAACCAATGTAAATCGATTTTTTTTTTGTACAACGGTTATAGTAAAAATGTTCACCAACATTGTACCCAAAAAAAAAAATGTTCACCAACAAAGTTTAATAAAAAGTTCTACACATTATATCAAATCATATAAATAATAATGTCACACATTCACTAAACATTTGCACAATTATCTATACACGACGTGACGATGTCTATGTAAAACTAATTTACATTGTAATAAATATTGTAATTAAACTCGTAGAAATATTATGCAACATATATGTAACCTGAAATTCTAACAATTTTGTATATGTCCAGGTGCTCATACGTTCGGAAGAGCTAAGTGTAGCACATTCATTAATCGTTTATACAATTTCAATAGCACTGGAAATCCTGATCAAACTCTAAACACAACTTACTTGCAAACATTGCGTGAGATATGTCCCCAAAATGGAACAGGGAACAATCTCACTAATTTGGACCTTACTACACCAAATCAATTTGACAACAAATTTTACTCCAATCTTCAAAGCCACAAAGGCTTACTTCAAAGTGATCAAGAGCTATTCTCAACTCCTAATGCAGATACTATTGCCATTGTTAATAGCTTTAGTAGTAACCAAGCTCTCTTCTTTGAGAATTTTAGGGTGTCCATGATTAAAATGGCTAATATTGGTGTACTAACTGGTGATCAAGGGGAAATTAGGTTGCAATGTAATTTTATTAATGCAGATTCCTCTGGATTATCTGGTGGTGCATCAAAAGATGAACTTTTAAGCTCATTCTAA
Protein sequence

>MS.gene003274.t1

MGSMNVLGVAFLCAVLMHAGYAQLNPSFYSQTCPFLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNINSLRGLDVVNQIKTAVENECPATVSCADILTIAAQVASVLGGGPSWQIPLGRRDSLTANQALANQNLPAPFFSLDQLKAAFLVQGLNTTDLVTLSGAHTFGRAKCSTFINRLYNFNSTGNPDQTLNTTYLQTLREICPQNGTGNNLTNLDLTTPNQFDNKFYSNLQSHKGLLQSDQELFSTPNADTIAIVNSFSSNQALFFENFRVSMIKMANIGVLTGDQGEIRLQCNFINADSSGLSGGASKDELLSSF