Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02083.t1 | CAA62226.1 | 98.6 | 357 | 3 | 1 | 1 | 357 | 1 | 355 | 2.00E-196 | 694.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02083.t1 | Q9LEH3 | 63.2 | 307 | 112 | 1 | 27 | 332 | 21 | 327 | 2.1e-106 | 387.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02083.t1 | Q43790 | 98.6 | 357 | 3 | 1 | 1 | 357 | 1 | 355 | 1.4e-196 | 694.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02083.t1 | MTR_2g029820 | 97.759 | 357 | 6 | 1 | 1 | 357 | 1 | 355 | 0.0 | 713 |
MS.gene02083.t1 | MTR_2g029815 | 89.636 | 357 | 32 | 2 | 1 | 357 | 1 | 352 | 0.0 | 648 |
MS.gene02083.t1 | MTR_2g029800 | 84.314 | 357 | 52 | 2 | 1 | 357 | 1 | 353 | 0.0 | 615 |
MS.gene02083.t1 | MTR_2g029830 | 80.899 | 356 | 64 | 2 | 1 | 355 | 1 | 353 | 0.0 | 574 |
MS.gene02083.t1 | MTR_2g028980 | 71.709 | 357 | 99 | 1 | 1 | 357 | 1 | 355 | 0.0 | 528 |
MS.gene02083.t1 | MTR_2g029850 | 73.109 | 357 | 89 | 4 | 1 | 356 | 1 | 351 | 0.0 | 526 |
MS.gene02083.t1 | MTR_2g029740 | 71.148 | 357 | 101 | 1 | 1 | 357 | 1 | 355 | 0.0 | 520 |
MS.gene02083.t1 | MTR_2g029860 | 72.346 | 358 | 93 | 5 | 1 | 357 | 1 | 353 | 0.0 | 515 |
MS.gene02083.t1 | MTR_2g029750 | 69.748 | 357 | 105 | 2 | 1 | 357 | 1 | 354 | 0.0 | 508 |
MS.gene02083.t1 | MTR_2g029830 | 84.342 | 281 | 43 | 1 | 76 | 355 | 5 | 285 | 8.92e-176 | 489 |
MS.gene02083.t1 | MTR_2g029910 | 66.854 | 356 | 111 | 3 | 3 | 357 | 4 | 353 | 1.32e-174 | 489 |
MS.gene02083.t1 | MTR_2g029560 | 65.418 | 347 | 111 | 2 | 1 | 347 | 1 | 338 | 1.19e-163 | 461 |
MS.gene02083.t1 | MTR_2g029730 | 63.966 | 358 | 115 | 3 | 1 | 357 | 1 | 345 | 6.65e-163 | 459 |
MS.gene02083.t1 | MTR_7g093370 | 60.586 | 307 | 120 | 1 | 27 | 332 | 65 | 371 | 1.48e-133 | 386 |
MS.gene02083.t1 | MTR_1g054205 | 59.164 | 311 | 126 | 1 | 23 | 332 | 16 | 326 | 5.67e-133 | 383 |
MS.gene02083.t1 | MTR_5g021060 | 52.805 | 303 | 142 | 1 | 31 | 333 | 30 | 331 | 8.49e-110 | 324 |
MS.gene02083.t1 | MTR_8g076820 | 50.495 | 303 | 149 | 1 | 31 | 333 | 30 | 331 | 9.27e-108 | 319 |
MS.gene02083.t1 | MTR_4g125940 | 50.617 | 324 | 156 | 2 | 12 | 333 | 9 | 330 | 4.59e-107 | 317 |
MS.gene02083.t1 | MTR_5g017860 | 51.148 | 305 | 145 | 3 | 29 | 332 | 25 | 326 | 4.12e-104 | 309 |
MS.gene02083.t1 | MTR_2g040000 | 49.837 | 307 | 149 | 2 | 30 | 333 | 28 | 332 | 4.40e-104 | 309 |
MS.gene02083.t1 | MTR_5g017850 | 49.673 | 306 | 148 | 4 | 29 | 332 | 25 | 326 | 3.58e-101 | 301 |
MS.gene02083.t1 | MTR_1g022970 | 48.675 | 302 | 155 | 0 | 31 | 332 | 46 | 347 | 3.03e-98 | 295 |
MS.gene02083.t1 | MTR_4g125940 | 53.986 | 276 | 123 | 2 | 60 | 333 | 2 | 275 | 2.85e-96 | 287 |
MS.gene02083.t1 | MTR_3g094650 | 47.950 | 317 | 150 | 4 | 14 | 328 | 15 | 318 | 9.40e-96 | 288 |
MS.gene02083.t1 | MTR_4g029200 | 48.254 | 315 | 154 | 2 | 18 | 332 | 33 | 338 | 1.15e-95 | 288 |
MS.gene02083.t1 | MTR_2g084080 | 45.768 | 319 | 164 | 2 | 14 | 332 | 8 | 317 | 1.79e-95 | 287 |
MS.gene02083.t1 | MTR_4g029170 | 48.113 | 318 | 154 | 4 | 17 | 332 | 13 | 321 | 3.50e-94 | 284 |
MS.gene02083.t1 | MTR_2g084000 | 48.852 | 305 | 148 | 2 | 28 | 332 | 23 | 319 | 3.91e-94 | 283 |
MS.gene02083.t1 | MTR_2g088770 | 45.988 | 324 | 169 | 5 | 12 | 333 | 7 | 326 | 7.31e-94 | 283 |
MS.gene02083.t1 | MTR_3g094670 | 47.273 | 330 | 157 | 5 | 1 | 328 | 4 | 318 | 8.53e-94 | 283 |
MS.gene02083.t1 | MTR_5g083860 | 45.706 | 326 | 163 | 4 | 9 | 332 | 12 | 325 | 2.21e-93 | 282 |
MS.gene02083.t1 | MTR_4g083710 | 47.975 | 321 | 155 | 4 | 15 | 332 | 13 | 324 | 8.70e-93 | 280 |
MS.gene02083.t1 | MTR_3g466200 | 46.154 | 325 | 159 | 5 | 11 | 332 | 9 | 320 | 1.03e-92 | 280 |
MS.gene02083.t1 | MTR_7g072510 | 44.172 | 326 | 163 | 3 | 7 | 332 | 6 | 312 | 1.47e-92 | 279 |
MS.gene02083.t1 | MTR_4g046713 | 45.455 | 319 | 170 | 3 | 15 | 332 | 11 | 326 | 2.23e-92 | 279 |
MS.gene02083.t1 | MTR_2g084090 | 47.436 | 312 | 152 | 5 | 23 | 332 | 17 | 318 | 7.09e-92 | 278 |
MS.gene02083.t1 | MTR_5g074970 | 46.828 | 331 | 159 | 6 | 7 | 332 | 8 | 326 | 7.87e-92 | 278 |
MS.gene02083.t1 | MTR_3g072190 | 47.525 | 303 | 150 | 2 | 30 | 332 | 25 | 318 | 9.62e-92 | 277 |
MS.gene02083.t1 | MTR_2g084020 | 45.141 | 319 | 167 | 2 | 14 | 332 | 8 | 318 | 9.62e-92 | 277 |
MS.gene02083.t1 | MTR_2g084110 | 44.828 | 319 | 167 | 2 | 14 | 332 | 8 | 317 | 2.03e-91 | 276 |
MS.gene02083.t1 | MTR_3g094630 | 47.006 | 334 | 160 | 5 | 1 | 332 | 4 | 322 | 5.10e-91 | 276 |
MS.gene02083.t1 | MTR_2g084010 | 45.455 | 319 | 166 | 2 | 14 | 332 | 8 | 318 | 6.09e-91 | 275 |
MS.gene02083.t1 | MTR_4g029190 | 49.351 | 308 | 144 | 5 | 28 | 332 | 42 | 340 | 8.09e-91 | 276 |
MS.gene02083.t1 | MTR_4g029180 | 48.173 | 301 | 145 | 4 | 34 | 332 | 30 | 321 | 1.26e-90 | 275 |
MS.gene02083.t1 | MTR_4g122640 | 43.155 | 336 | 177 | 4 | 7 | 332 | 5 | 336 | 1.32e-89 | 273 |
MS.gene02083.t1 | MTR_7g072480 | 45.768 | 319 | 160 | 3 | 14 | 332 | 11 | 316 | 5.74e-88 | 268 |
MS.gene02083.t1 | MTR_4g114210 | 44.099 | 322 | 164 | 6 | 18 | 332 | 8 | 320 | 7.83e-88 | 267 |
MS.gene02083.t1 | MTR_5g014100 | 46.865 | 303 | 157 | 2 | 34 | 332 | 29 | 331 | 1.18e-87 | 267 |
MS.gene02083.t1 | MTR_7g107520 | 43.887 | 319 | 173 | 4 | 14 | 332 | 8 | 320 | 2.24e-87 | 266 |
MS.gene02083.t1 | MTR_4g074995 | 46.106 | 321 | 148 | 5 | 15 | 332 | 10 | 308 | 2.94e-87 | 266 |
MS.gene02083.t1 | MTR_5g074760 | 46.254 | 307 | 154 | 4 | 29 | 332 | 23 | 321 | 7.78e-87 | 265 |
MS.gene02083.t1 | MTR_5g074740 | 46.254 | 307 | 154 | 4 | 29 | 332 | 23 | 321 | 9.66e-87 | 265 |
MS.gene02083.t1 | MTR_5g049280 | 43.987 | 316 | 166 | 6 | 25 | 333 | 27 | 338 | 1.76e-86 | 265 |
MS.gene02083.t1 | MTR_5g074860 | 44.311 | 334 | 173 | 5 | 1 | 331 | 1 | 324 | 2.13e-86 | 264 |
MS.gene02083.t1 | MTR_1g115900 | 41.742 | 333 | 180 | 5 | 3 | 333 | 2 | 322 | 2.51e-86 | 264 |
MS.gene02083.t1 | MTR_3g466180 | 45.397 | 315 | 163 | 2 | 18 | 332 | 18 | 323 | 3.22e-86 | 263 |
MS.gene02083.t1 | MTR_3g092990 | 43.125 | 320 | 179 | 2 | 15 | 333 | 10 | 327 | 3.77e-86 | 263 |
MS.gene02083.t1 | MTR_5g074710 | 46.906 | 307 | 152 | 4 | 29 | 332 | 23 | 321 | 3.91e-86 | 263 |
MS.gene02083.t1 | MTR_2g029880 | 60.648 | 216 | 71 | 3 | 141 | 356 | 7 | 208 | 9.53e-86 | 258 |
MS.gene02083.t1 | MTR_4g031140 | 41.667 | 312 | 177 | 3 | 27 | 338 | 24 | 330 | 3.55e-84 | 259 |
MS.gene02083.t1 | MTR_4g030890 | 43.042 | 309 | 171 | 3 | 26 | 334 | 95 | 398 | 1.49e-83 | 259 |
MS.gene02083.t1 | MTR_2g008710 | 44.702 | 302 | 156 | 5 | 35 | 332 | 31 | 325 | 1.56e-83 | 256 |
MS.gene02083.t1 | MTR_3g467600 | 45.031 | 322 | 167 | 3 | 14 | 332 | 10 | 324 | 2.07e-83 | 256 |
MS.gene02083.t1 | MTR_4g133800 | 45.302 | 298 | 152 | 6 | 36 | 332 | 46 | 333 | 2.61e-83 | 256 |
MS.gene02083.t1 | MTR_6g043240 | 46.951 | 328 | 146 | 10 | 31 | 353 | 42 | 346 | 1.43e-82 | 255 |
MS.gene02083.t1 | MTR_7g086820 | 42.020 | 307 | 169 | 5 | 29 | 335 | 18 | 315 | 2.92e-81 | 250 |
MS.gene02083.t1 | MTR_6g043280 | 42.442 | 344 | 165 | 8 | 11 | 334 | 4 | 334 | 5.20e-80 | 248 |
MS.gene02083.t1 | MTR_4g074990 | 41.925 | 322 | 158 | 4 | 14 | 332 | 10 | 305 | 1.54e-79 | 246 |
MS.gene02083.t1 | MTR_5g016010 | 41.791 | 335 | 184 | 6 | 1 | 331 | 1 | 328 | 4.48e-79 | 245 |
MS.gene02083.t1 | MTR_1g009750 | 45.277 | 307 | 160 | 5 | 30 | 332 | 26 | 328 | 9.75e-79 | 244 |
MS.gene02083.t1 | MTR_1g086490 | 40.233 | 343 | 191 | 5 | 1 | 332 | 1 | 340 | 4.53e-78 | 243 |
MS.gene02083.t1 | MTR_1g086320 | 40.000 | 330 | 188 | 4 | 9 | 332 | 8 | 333 | 9.34e-78 | 242 |
MS.gene02083.t1 | MTR_1g101830 | 42.810 | 306 | 169 | 4 | 27 | 332 | 23 | 322 | 9.76e-78 | 242 |
MS.gene02083.t1 | MTR_7g026990 | 39.432 | 317 | 182 | 3 | 17 | 333 | 17 | 323 | 1.07e-77 | 241 |
MS.gene02083.t1 | MTR_5g022870 | 40.549 | 328 | 181 | 8 | 6 | 332 | 2 | 316 | 1.24e-77 | 241 |
MS.gene02083.t1 | MTR_4g087965 | 43.279 | 305 | 166 | 5 | 30 | 329 | 41 | 343 | 1.31e-77 | 242 |
MS.gene02083.t1 | MTR_2g437770 | 43.522 | 301 | 158 | 6 | 34 | 333 | 53 | 342 | 2.12e-77 | 241 |
MS.gene02083.t1 | MTR_1g038680 | 43.046 | 302 | 166 | 4 | 35 | 332 | 33 | 332 | 3.42e-77 | 241 |
MS.gene02083.t1 | MTR_6g043460 | 44.333 | 300 | 154 | 6 | 31 | 328 | 36 | 324 | 2.02e-76 | 239 |
MS.gene02083.t1 | MTR_8g075100 | 41.368 | 307 | 172 | 5 | 26 | 332 | 21 | 319 | 3.44e-76 | 238 |
MS.gene02083.t1 | MTR_4g127670 | 45.545 | 303 | 155 | 5 | 30 | 328 | 23 | 319 | 5.25e-76 | 237 |
MS.gene02083.t1 | MTR_4g095450 | 43.711 | 318 | 165 | 6 | 16 | 328 | 12 | 320 | 2.56e-74 | 233 |
MS.gene02083.t1 | MTR_3g072190 | 46.718 | 259 | 129 | 2 | 74 | 332 | 2 | 251 | 2.75e-74 | 230 |
MS.gene02083.t1 | MTR_6g027440 | 40.557 | 323 | 175 | 8 | 14 | 332 | 5 | 314 | 1.12e-73 | 231 |
MS.gene02083.t1 | MTR_3g092990 | 40.625 | 320 | 176 | 3 | 15 | 333 | 10 | 316 | 2.54e-73 | 230 |
MS.gene02083.t1 | MTR_4g132490 | 39.375 | 320 | 184 | 5 | 18 | 332 | 13 | 327 | 3.38e-73 | 230 |
MS.gene02083.t1 | MTR_4g074980 | 40.881 | 318 | 155 | 5 | 15 | 332 | 10 | 294 | 9.09e-73 | 228 |
MS.gene02083.t1 | MTR_7g029030 | 41.433 | 321 | 179 | 5 | 14 | 332 | 7 | 320 | 1.57e-71 | 226 |
MS.gene02083.t1 | MTR_1g025980 | 39.937 | 318 | 183 | 5 | 14 | 331 | 8 | 317 | 1.78e-71 | 226 |
MS.gene02083.t1 | MTR_1g090760 | 40.741 | 324 | 182 | 6 | 15 | 332 | 11 | 330 | 3.11e-71 | 225 |
MS.gene02083.t1 | MTR_1g077000 | 37.725 | 334 | 193 | 7 | 1 | 332 | 7 | 327 | 2.92e-70 | 223 |
MS.gene02083.t1 | MTR_2g099175 | 37.681 | 345 | 192 | 8 | 1 | 332 | 1 | 335 | 2.50e-69 | 221 |
MS.gene02083.t1 | MTR_0155s0040 | 37.231 | 325 | 185 | 6 | 14 | 332 | 4 | 315 | 2.63e-69 | 220 |
MS.gene02083.t1 | MTR_4g074980 | 44.841 | 252 | 129 | 3 | 14 | 262 | 9 | 253 | 5.02e-69 | 217 |
MS.gene02083.t1 | MTR_7g086870 | 40.260 | 308 | 166 | 7 | 29 | 333 | 20 | 312 | 6.29e-69 | 219 |
MS.gene02083.t1 | MTR_2g008160 | 40.514 | 311 | 173 | 6 | 27 | 332 | 20 | 323 | 8.79e-69 | 219 |
MS.gene02083.t1 | MTR_1g009750 | 42.020 | 307 | 153 | 6 | 30 | 332 | 26 | 311 | 1.49e-68 | 218 |
MS.gene02083.t1 | MTR_5g074860 | 38.922 | 334 | 152 | 5 | 1 | 331 | 1 | 285 | 2.89e-66 | 211 |
MS.gene02083.t1 | MTR_8g062780 | 37.654 | 324 | 193 | 5 | 14 | 333 | 7 | 325 | 1.20e-65 | 211 |
MS.gene02083.t1 | MTR_5g033470 | 38.462 | 312 | 179 | 7 | 29 | 332 | 71 | 377 | 8.47e-64 | 207 |
MS.gene02083.t1 | MTR_2g008730 | 37.920 | 327 | 167 | 6 | 11 | 332 | 6 | 301 | 2.56e-63 | 204 |
MS.gene02083.t1 | MTR_0286s0010 | 39.550 | 311 | 177 | 7 | 27 | 332 | 30 | 334 | 2.35e-62 | 202 |
MS.gene02083.t1 | MTR_6g008075 | 39.550 | 311 | 177 | 7 | 27 | 332 | 30 | 334 | 2.35e-62 | 202 |
MS.gene02083.t1 | MTR_2g067440 | 35.411 | 353 | 188 | 7 | 17 | 333 | 40 | 388 | 2.96e-62 | 204 |
MS.gene02083.t1 | MTR_2g078610 | 35.795 | 352 | 185 | 8 | 16 | 329 | 55 | 403 | 3.28e-62 | 204 |
MS.gene02083.t1 | MTR_2g077990 | 35.897 | 351 | 184 | 8 | 16 | 328 | 55 | 402 | 1.05e-61 | 203 |
MS.gene02083.t1 | MTR_3g105790 | 39.032 | 310 | 179 | 4 | 26 | 332 | 20 | 322 | 1.39e-61 | 200 |
MS.gene02083.t1 | MTR_1g066710 | 38.511 | 309 | 177 | 5 | 29 | 333 | 25 | 324 | 2.70e-61 | 199 |
MS.gene02083.t1 | MTR_1g066380 | 37.662 | 308 | 181 | 4 | 29 | 333 | 25 | 324 | 3.14e-59 | 194 |
MS.gene02083.t1 | MTR_1g066640 | 37.987 | 308 | 180 | 4 | 29 | 333 | 25 | 324 | 1.17e-58 | 192 |
MS.gene02083.t1 | MTR_0147s0010 | 35.185 | 324 | 174 | 4 | 28 | 331 | 74 | 381 | 1.55e-58 | 194 |
MS.gene02083.t1 | MTR_4g132110 | 37.013 | 308 | 181 | 5 | 34 | 337 | 35 | 333 | 2.60e-58 | 192 |
MS.gene02083.t1 | MTR_2g078280 | 35.484 | 341 | 179 | 8 | 16 | 318 | 55 | 392 | 4.56e-57 | 191 |
MS.gene02083.t1 | MTR_4g132110 | 36.741 | 313 | 180 | 6 | 34 | 337 | 35 | 338 | 5.21e-57 | 189 |
MS.gene02083.t1 | MTR_1g066680 | 37.419 | 310 | 178 | 6 | 29 | 333 | 25 | 323 | 2.61e-56 | 186 |
MS.gene02083.t1 | MTR_2g067450 | 37.459 | 307 | 182 | 6 | 29 | 331 | 9 | 309 | 1.81e-55 | 184 |
MS.gene02083.t1 | MTR_2g008160 | 35.370 | 311 | 154 | 6 | 27 | 332 | 20 | 288 | 8.74e-52 | 174 |
MS.gene02083.t1 | MTR_1g066380 | 38.931 | 262 | 149 | 4 | 75 | 333 | 3 | 256 | 1.56e-48 | 164 |
MS.gene02083.t1 | MTR_2g008160 | 44.382 | 178 | 95 | 3 | 27 | 204 | 20 | 193 | 6.15e-45 | 153 |
MS.gene02083.t1 | MTR_3g072210 | 45.026 | 191 | 96 | 3 | 143 | 332 | 56 | 238 | 3.37e-44 | 152 |
MS.gene02083.t1 | MTR_3g105790 | 39.496 | 238 | 138 | 3 | 98 | 332 | 12 | 246 | 3.24e-43 | 150 |
MS.gene02083.t1 | MTR_5g074700 | 39.655 | 232 | 115 | 5 | 104 | 332 | 5 | 214 | 7.64e-43 | 148 |
MS.gene02083.t1 | MTR_7g072490 | 36.948 | 249 | 94 | 3 | 77 | 325 | 2 | 187 | 2.04e-39 | 139 |
MS.gene02083.t1 | MTR_3g072260 | 55.238 | 105 | 47 | 0 | 30 | 134 | 25 | 129 | 2.00e-34 | 124 |
MS.gene02083.t1 | MTR_2g029930 | 58.261 | 115 | 20 | 3 | 14 | 114 | 2 | 102 | 1.52e-33 | 120 |
MS.gene02083.t1 | MTR_5g058120 | 42.945 | 163 | 80 | 3 | 166 | 328 | 6 | 155 | 4.25e-32 | 121 |
MS.gene02083.t1 | MTR_2g077980 | 32.857 | 280 | 145 | 10 | 93 | 333 | 11 | 286 | 4.90e-30 | 116 |
MS.gene02083.t1 | MTR_2g078560 | 32.018 | 228 | 122 | 5 | 137 | 333 | 96 | 321 | 6.18e-28 | 111 |
MS.gene02083.t1 | MTR_3g462850 | 40.411 | 146 | 76 | 6 | 195 | 333 | 9 | 150 | 9.05e-24 | 95.9 |
MS.gene02083.t1 | MTR_7g086790 | 32.292 | 192 | 108 | 4 | 78 | 269 | 17 | 186 | 5.17e-22 | 92.4 |
MS.gene02083.t1 | MTR_1g089005 | 41.270 | 126 | 60 | 3 | 16 | 135 | 7 | 124 | 2.28e-21 | 89.7 |
MS.gene02083.t1 | MTR_1g098320 | 48.193 | 83 | 41 | 1 | 253 | 335 | 47 | 127 | 1.19e-17 | 79.0 |
MS.gene02083.t1 | MTR_4g114220 | 47.059 | 85 | 35 | 2 | 51 | 135 | 23 | 97 | 1.94e-17 | 78.6 |
MS.gene02083.t1 | MTR_6g048160 | 54.930 | 71 | 28 | 2 | 70 | 140 | 22 | 88 | 2.59e-17 | 76.6 |
MS.gene02083.t1 | MTR_4g012865 | 45.070 | 71 | 39 | 0 | 28 | 98 | 74 | 144 | 4.20e-17 | 77.8 |
MS.gene02083.t1 | MTR_5g074770 | 42.529 | 87 | 49 | 1 | 245 | 331 | 23 | 108 | 9.54e-16 | 72.8 |
MS.gene02083.t1 | MTR_7g107500 | 41.414 | 99 | 54 | 3 | 234 | 332 | 3 | 97 | 1.05e-13 | 66.6 |
MS.gene02083.t1 | MTR_7g086810 | 31.405 | 121 | 57 | 1 | 29 | 149 | 4 | 98 | 1.17e-13 | 70.1 |
MS.gene02083.t1 | MTR_3g107060 | 26.471 | 272 | 152 | 8 | 46 | 316 | 91 | 315 | 2.46e-13 | 70.5 |
MS.gene02083.t1 | MTR_4g031040 | 28.571 | 175 | 81 | 3 | 90 | 264 | 1 | 131 | 4.04e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02083.t1 | AT5G06730 | 56.211 | 322 | 141 | 0 | 14 | 335 | 16 | 337 | 7.01e-132 | 381 |
MS.gene02083.t1 | AT5G06720 | 55.728 | 323 | 143 | 0 | 10 | 332 | 11 | 333 | 2.35e-131 | 379 |
MS.gene02083.t1 | AT2G38380 | 53.714 | 350 | 149 | 4 | 12 | 357 | 9 | 349 | 1.73e-128 | 372 |
MS.gene02083.t1 | AT2G38390 | 52.000 | 350 | 155 | 4 | 12 | 357 | 9 | 349 | 3.51e-126 | 366 |
MS.gene02083.t1 | AT3G49120 | 54.203 | 345 | 150 | 3 | 7 | 349 | 14 | 352 | 5.27e-125 | 363 |
MS.gene02083.t1 | AT3G32980 | 56.308 | 325 | 140 | 2 | 27 | 349 | 27 | 351 | 1.91e-124 | 362 |
MS.gene02083.t1 | AT3G49110 | 55.692 | 325 | 142 | 2 | 27 | 349 | 29 | 353 | 1.08e-121 | 355 |
MS.gene02083.t1 | AT4G08770 | 55.312 | 320 | 141 | 2 | 27 | 344 | 20 | 339 | 5.03e-121 | 353 |
MS.gene02083.t1 | AT4G08780 | 53.750 | 320 | 146 | 2 | 27 | 344 | 20 | 339 | 2.06e-117 | 344 |
MS.gene02083.t1 | AT5G19880 | 51.553 | 322 | 150 | 3 | 14 | 332 | 11 | 329 | 8.91e-113 | 332 |
MS.gene02083.t1 | AT2G18150 | 51.316 | 304 | 147 | 1 | 29 | 332 | 34 | 336 | 6.57e-108 | 319 |
MS.gene02083.t1 | AT2G18140 | 49.231 | 325 | 160 | 2 | 8 | 332 | 16 | 335 | 8.26e-108 | 319 |
MS.gene02083.t1 | AT4G36430 | 51.623 | 308 | 148 | 1 | 26 | 333 | 25 | 331 | 1.02e-106 | 316 |
MS.gene02083.t1 | AT5G66390 | 49.675 | 308 | 154 | 1 | 25 | 332 | 27 | 333 | 2.54e-106 | 315 |
MS.gene02083.t1 | AT5G19890 | 50.311 | 322 | 152 | 4 | 14 | 333 | 13 | 328 | 4.61e-104 | 309 |
MS.gene02083.t1 | AT3G50990 | 49.837 | 307 | 153 | 1 | 26 | 332 | 36 | 341 | 1.78e-102 | 306 |
MS.gene02083.t1 | AT1G44970 | 49.196 | 311 | 156 | 1 | 22 | 332 | 38 | 346 | 1.69e-100 | 301 |
MS.gene02083.t1 | AT1G14550 | 48.852 | 305 | 148 | 3 | 29 | 332 | 24 | 321 | 4.79e-98 | 293 |
MS.gene02083.t1 | AT5G05340 | 48.039 | 306 | 148 | 3 | 29 | 332 | 28 | 324 | 2.34e-96 | 289 |
MS.gene02083.t1 | AT4G16270 | 47.855 | 303 | 153 | 4 | 31 | 332 | 50 | 348 | 9.25e-94 | 283 |
MS.gene02083.t1 | AT1G14540 | 47.170 | 318 | 160 | 4 | 15 | 332 | 6 | 315 | 1.11e-92 | 280 |
MS.gene02083.t1 | AT1G49570 | 45.902 | 305 | 160 | 3 | 29 | 330 | 46 | 348 | 1.47e-92 | 281 |
MS.gene02083.t1 | AT1G68850 | 46.382 | 304 | 157 | 5 | 35 | 333 | 34 | 336 | 3.65e-91 | 276 |
MS.gene02083.t1 | AT1G05260 | 42.388 | 335 | 182 | 6 | 1 | 333 | 1 | 326 | 1.44e-86 | 265 |
MS.gene02083.t1 | AT2G41480 | 44.753 | 324 | 165 | 6 | 14 | 332 | 14 | 328 | 2.13e-86 | 264 |
MS.gene02083.t1 | AT5G58390 | 45.597 | 318 | 161 | 5 | 14 | 328 | 4 | 312 | 1.34e-85 | 261 |
MS.gene02083.t1 | AT4G11290 | 42.056 | 321 | 182 | 3 | 14 | 332 | 8 | 326 | 1.36e-85 | 262 |
MS.gene02083.t1 | AT1G71695 | 46.429 | 308 | 153 | 6 | 31 | 335 | 44 | 342 | 3.24e-85 | 262 |
MS.gene02083.t1 | AT2G35380 | 47.682 | 302 | 154 | 3 | 35 | 332 | 34 | 335 | 3.71e-85 | 261 |
MS.gene02083.t1 | AT5G58400 | 45.031 | 322 | 165 | 4 | 14 | 332 | 13 | 325 | 1.44e-84 | 259 |
MS.gene02083.t1 | AT3G03670 | 42.453 | 318 | 179 | 3 | 15 | 332 | 8 | 321 | 2.31e-84 | 259 |
MS.gene02083.t1 | AT2G22420 | 42.628 | 312 | 174 | 3 | 31 | 342 | 23 | 329 | 7.53e-84 | 258 |
MS.gene02083.t1 | AT2G18980 | 45.652 | 322 | 164 | 5 | 15 | 332 | 9 | 323 | 1.67e-83 | 256 |
MS.gene02083.t1 | AT5G15180 | 40.774 | 336 | 185 | 7 | 4 | 332 | 1 | 329 | 1.30e-82 | 254 |
MS.gene02083.t1 | AT3G21770 | 43.038 | 316 | 174 | 5 | 20 | 333 | 18 | 329 | 4.97e-82 | 253 |
MS.gene02083.t1 | AT3G01190 | 41.538 | 325 | 179 | 7 | 9 | 332 | 7 | 321 | 1.11e-81 | 252 |
MS.gene02083.t1 | AT4G30170 | 45.307 | 309 | 158 | 5 | 28 | 332 | 24 | 325 | 1.26e-81 | 252 |
MS.gene02083.t1 | AT5G14130 | 43.034 | 323 | 175 | 5 | 15 | 332 | 12 | 330 | 1.67e-81 | 251 |
MS.gene02083.t1 | AT5G14130 | 43.034 | 323 | 175 | 5 | 15 | 332 | 53 | 371 | 2.78e-81 | 253 |
MS.gene02083.t1 | AT5G64120 | 43.960 | 298 | 159 | 5 | 35 | 332 | 39 | 328 | 3.89e-81 | 251 |
MS.gene02083.t1 | AT1G05240 | 44.156 | 308 | 158 | 5 | 31 | 332 | 26 | 325 | 1.18e-80 | 249 |
MS.gene02083.t1 | AT1G05250 | 44.156 | 308 | 158 | 5 | 31 | 332 | 26 | 325 | 1.18e-80 | 249 |
MS.gene02083.t1 | AT5G51890 | 43.648 | 307 | 166 | 5 | 27 | 332 | 22 | 322 | 9.77e-80 | 247 |
MS.gene02083.t1 | AT4G37530 | 43.689 | 309 | 169 | 3 | 27 | 332 | 23 | 329 | 2.45e-79 | 246 |
MS.gene02083.t1 | AT5G67400 | 43.252 | 326 | 175 | 5 | 14 | 332 | 7 | 329 | 2.55e-79 | 246 |
MS.gene02083.t1 | AT5G17820 | 41.447 | 304 | 166 | 5 | 29 | 332 | 22 | 313 | 7.50e-79 | 244 |
MS.gene02083.t1 | AT5G17820 | 41.447 | 304 | 166 | 5 | 29 | 332 | 75 | 366 | 9.26e-78 | 243 |
MS.gene02083.t1 | AT3G49960 | 42.073 | 328 | 178 | 5 | 9 | 332 | 10 | 329 | 9.04e-77 | 239 |
MS.gene02083.t1 | AT4G25980 | 41.479 | 311 | 171 | 5 | 27 | 332 | 22 | 326 | 2.83e-76 | 238 |
MS.gene02083.t1 | AT5G39580 | 43.667 | 300 | 158 | 7 | 35 | 332 | 29 | 319 | 7.59e-76 | 237 |
MS.gene02083.t1 | AT4G37520 | 41.042 | 307 | 176 | 3 | 29 | 332 | 25 | 329 | 7.87e-74 | 232 |
MS.gene02083.t1 | AT5G64110 | 44.371 | 302 | 155 | 7 | 35 | 332 | 38 | 330 | 1.29e-73 | 231 |
MS.gene02083.t1 | AT4G37520 | 40.717 | 307 | 174 | 4 | 29 | 332 | 25 | 326 | 2.53e-72 | 228 |
MS.gene02083.t1 | AT5G64100 | 42.193 | 301 | 161 | 7 | 35 | 332 | 41 | 331 | 3.23e-72 | 228 |
MS.gene02083.t1 | AT2G39040 | 42.444 | 311 | 168 | 7 | 29 | 332 | 44 | 350 | 1.02e-71 | 227 |
MS.gene02083.t1 | AT4G33420 | 38.906 | 329 | 185 | 8 | 4 | 332 | 13 | 325 | 1.35e-71 | 226 |
MS.gene02083.t1 | AT4G33420 | 38.906 | 329 | 185 | 8 | 4 | 332 | 60 | 372 | 5.72e-71 | 226 |
MS.gene02083.t1 | AT5G42180 | 40.252 | 318 | 180 | 7 | 15 | 331 | 8 | 316 | 2.02e-70 | 223 |
MS.gene02083.t1 | AT2G34060 | 40.260 | 308 | 175 | 6 | 28 | 329 | 39 | 343 | 2.00e-69 | 221 |
MS.gene02083.t1 | AT2G24800 | 40.909 | 308 | 171 | 5 | 29 | 332 | 29 | 329 | 1.62e-68 | 218 |
MS.gene02083.t1 | AT4G37530 | 45.136 | 257 | 138 | 2 | 27 | 280 | 23 | 279 | 5.19e-68 | 215 |
MS.gene02083.t1 | AT4G33870 | 35.629 | 334 | 169 | 6 | 35 | 329 | 72 | 398 | 8.12e-68 | 219 |
MS.gene02083.t1 | AT5G24070 | 38.348 | 339 | 182 | 9 | 11 | 333 | 9 | 336 | 8.52e-68 | 217 |
MS.gene02083.t1 | AT4G31760 | 38.710 | 310 | 182 | 3 | 25 | 332 | 23 | 326 | 1.27e-67 | 216 |
MS.gene02083.t1 | AT4G17690 | 39.159 | 309 | 177 | 5 | 31 | 336 | 26 | 326 | 5.68e-66 | 212 |
MS.gene02083.t1 | AT2G43480 | 37.101 | 345 | 185 | 10 | 9 | 332 | 2 | 335 | 7.75e-66 | 211 |
MS.gene02083.t1 | AT1G77100 | 38.906 | 329 | 185 | 7 | 9 | 332 | 2 | 319 | 1.25e-65 | 211 |
MS.gene02083.t1 | AT5G40150 | 39.423 | 312 | 180 | 4 | 23 | 332 | 24 | 328 | 1.69e-65 | 211 |
MS.gene02083.t1 | AT1G24110 | 37.805 | 328 | 193 | 6 | 8 | 332 | 3 | 322 | 4.19e-65 | 209 |
MS.gene02083.t1 | AT5G47000 | 37.462 | 331 | 193 | 6 | 9 | 336 | 15 | 334 | 4.58e-65 | 209 |
MS.gene02083.t1 | AT4G26010 | 40.193 | 311 | 164 | 8 | 26 | 332 | 17 | 309 | 1.54e-64 | 207 |
MS.gene02083.t1 | AT4G26010 | 40.193 | 311 | 164 | 8 | 26 | 332 | 45 | 337 | 2.26e-64 | 208 |
MS.gene02083.t1 | AT3G28200 | 37.540 | 309 | 183 | 4 | 26 | 332 | 16 | 316 | 5.52e-63 | 204 |
MS.gene02083.t1 | AT5G22410 | 36.728 | 324 | 183 | 9 | 15 | 328 | 10 | 321 | 2.75e-62 | 202 |
MS.gene02083.t1 | AT1G30870 | 38.487 | 304 | 174 | 6 | 35 | 335 | 55 | 348 | 4.24e-62 | 202 |
MS.gene02083.t1 | AT4G21960 | 36.970 | 330 | 189 | 7 | 14 | 333 | 8 | 328 | 2.49e-61 | 200 |
MS.gene02083.t1 | AT2G35380 | 45.749 | 247 | 130 | 3 | 90 | 332 | 1 | 247 | 4.59e-61 | 196 |
MS.gene02083.t1 | AT1G34510 | 39.414 | 307 | 168 | 8 | 29 | 333 | 20 | 310 | 2.85e-60 | 196 |
MS.gene02083.t1 | AT3G17070 | 38.095 | 336 | 186 | 10 | 10 | 332 | 13 | 339 | 6.15e-58 | 191 |
MS.gene02083.t1 | AT2G37130 | 36.570 | 309 | 184 | 5 | 28 | 332 | 27 | 327 | 9.28e-56 | 185 |
MS.gene02083.t1 | AT2G37130 | 36.634 | 303 | 180 | 5 | 34 | 332 | 2 | 296 | 2.16e-54 | 181 |
MS.gene02083.t1 | AT4G25980 | 41.475 | 217 | 118 | 4 | 27 | 238 | 67 | 279 | 5.24e-49 | 166 |
MS.gene02083.t1 | AT3G17070 | 37.546 | 269 | 149 | 10 | 73 | 332 | 18 | 276 | 4.94e-41 | 145 |
MS.gene02083.t1 | AT5G39580 | 46.512 | 172 | 85 | 4 | 35 | 205 | 29 | 194 | 3.06e-40 | 142 |
MS.gene02083.t1 | AT2G24800 | 42.442 | 172 | 95 | 1 | 29 | 200 | 29 | 196 | 3.73e-37 | 134 |
MS.gene02083.t1 | AT1G77490 | 28.137 | 263 | 151 | 9 | 65 | 316 | 106 | 341 | 1.28e-15 | 78.2 |
MS.gene02083.t1 | AT1G77490 | 28.137 | 263 | 151 | 9 | 65 | 316 | 106 | 341 | 1.53e-15 | 77.8 |
MS.gene02083.t1 | AT3G09640 | 25.352 | 213 | 117 | 5 | 105 | 315 | 74 | 246 | 3.54e-13 | 68.9 |
MS.gene02083.t1 | AT3G09640 | 25.352 | 213 | 117 | 5 | 105 | 315 | 74 | 246 | 3.54e-13 | 68.9 |
MS.gene02083.t1 | AT3G42570 | 31.507 | 146 | 87 | 4 | 55 | 198 | 15 | 149 | 2.57e-11 | 61.6 |
Find 69 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGACAAGTGTTCCTGTAAA+AGG | 0.264524 | 2.2:+58067125 | None:intergenic |
AATTCAAAATCAGTAGAATT+AGG | 0.272602 | 2.2:-58065216 | MS.gene02083:CDS |
TAGGGCTGCTATGATCAAAA+TGG | 0.283772 | 2.2:-58065298 | MS.gene02083:CDS |
GGAAATATTGGTGTGTTAAC+CGG | 0.297989 | 2.2:-58065276 | MS.gene02083:CDS |
TCTAATCTCTCCTTGGTTCC+CGG | 0.308228 | 2.2:+58065257 | None:intergenic |
CCTCTTAATGAGTTTCTGTT+TGG | 0.310696 | 2.2:+58066146 | None:intergenic |
ATTTCAGGTGCTCATACATT+TGG | 0.340486 | 2.2:-58065630 | MS.gene02083:intron |
TAGTTCTTGTCAAATTTATC+AGG | 0.341189 | 2.2:+58065450 | None:intergenic |
CAGAAACTCATTAAGAGGTT+TGG | 0.342785 | 2.2:-58066141 | MS.gene02083:CDS |
CGAACAATGGAACTAACATT+TGG | 0.350033 | 2.2:+58067105 | None:intergenic |
AGGAGTCGTTGGATCGAAAT+TGG | 0.358608 | 2.2:+58065470 | None:intergenic |
CCAAACAGAAACTCATTAAG+AGG | 0.372095 | 2.2:-58066146 | MS.gene02083:CDS |
CCTGACTGGAAGGTTCCTTT+AGG | 0.381585 | 2.2:-58065899 | MS.gene02083:CDS |
CAAGAGTTGTTCTCAACATC+TGG | 0.390230 | 2.2:-58065384 | MS.gene02083:CDS |
ATGATCAAAATGGGAAATAT+TGG | 0.401401 | 2.2:-58065288 | MS.gene02083:CDS |
ATTGTGGTTGTGCTTGTGCT+TGG | 0.425578 | 2.2:-58067186 | MS.gene02083:CDS |
CCATTGTTCGTGAAGTCATA+AGG | 0.434806 | 2.2:-58067092 | MS.gene02083:CDS |
GAATTTGTTGACAATGCTAA+TGG | 0.449121 | 2.2:+58065353 | None:intergenic |
GTATGCTTGCTAGTCTTGTC+AGG | 0.452656 | 2.2:-58067047 | MS.gene02083:CDS |
AAACCATCTCTTCTTCCTAA+AGG | 0.452959 | 2.2:+58065884 | None:intergenic |
TTGTACAACTTCAGCGGTAC+GGG | 0.454738 | 2.2:-58065576 | MS.gene02083:CDS |
AATCAAAACAGCTGTGGAAA+AGG | 0.458727 | 2.2:-58066105 | MS.gene02083:CDS |
AGGAAGAAGAGATGGTTTAA+CGG | 0.466894 | 2.2:-58065879 | MS.gene02083:CDS |
AGGTCTCGATACTACTGATC+TGG | 0.469058 | 2.2:-58065777 | MS.gene02083:CDS |
GTGGTTGTGCTTGTGCTTGG+AGG | 0.473632 | 2.2:-58067183 | MS.gene02083:CDS |
TCAGCACAAGAAACTGTGTT+AGG | 0.474603 | 2.2:+58066077 | None:intergenic |
AAGTAAGTTGTGTTAAGAGT+TGG | 0.480928 | 2.2:+58065543 | None:intergenic |
AGATTCATCTGAGGAGGGTA+TGG | 0.483874 | 2.2:-58065172 | MS.gene02083:CDS |
ACTGATCTGGTTGCACTCTC+CGG | 0.486593 | 2.2:-58065764 | MS.gene02083:intron |
AATAGGCAGATGGTCCTGAC+TGG | 0.492532 | 2.2:-58065913 | MS.gene02083:intron |
CCTAAAGGAACCTTCCAGTC+AGG | 0.502692 | 2.2:+58065899 | None:intergenic |
AGGGCTGCTATGATCAAAAT+GGG | 0.502945 | 2.2:-58065297 | MS.gene02083:CDS |
TTCGTGCCAGGTCCACCATT+GGG | 0.506163 | 2.2:+58065498 | None:intergenic |
TGGTTGTGCTTGTGCTTGGA+GGG | 0.513541 | 2.2:-58067182 | MS.gene02083:CDS |
AGTTGTGTTAAGAGTTGGAT+CGG | 0.517053 | 2.2:+58065548 | None:intergenic |
TCAAATTTATCAGGAGTCGT+TGG | 0.517441 | 2.2:+58065459 | None:intergenic |
GAAATATTGGTGTGTTAACC+GGG | 0.517789 | 2.2:-58065275 | MS.gene02083:CDS |
AATAGCTTTGTGCTGTATTG+TGG | 0.521315 | 2.2:-58067202 | MS.gene02083:CDS |
CCTTATGACTTCACGAACAA+TGG | 0.525359 | 2.2:+58067092 | None:intergenic |
TCAGTAGTATTGAAAGGAGC+TGG | 0.530365 | 2.2:+58065827 | None:intergenic |
ATATGTCCCAATGGTGGACC+TGG | 0.533119 | 2.2:-58065504 | MS.gene02083:CDS |
TACCGCTGAAGTTGTACAAT+CGG | 0.535831 | 2.2:+58065580 | None:intergenic |
AAGTTGTGCATTTGAAGAGA+AGG | 0.538902 | 2.2:+58067155 | None:intergenic |
GTTCGTGCCAGGTCCACCAT+TGG | 0.546841 | 2.2:+58065497 | None:intergenic |
AGTTGATCAGTAGTATTGAA+AGG | 0.552774 | 2.2:+58065821 | None:intergenic |
AAAGCTGCATTTGCTGCTCA+AGG | 0.555072 | 2.2:-58065797 | MS.gene02083:CDS |
GTTGTGTTAAGAGTTGGATC+GGG | 0.555195 | 2.2:+58065549 | None:intergenic |
GGCAGATGGTCCTGACTGGA+AGG | 0.562824 | 2.2:-58065909 | MS.gene02083:CDS |
CTCAACAGATTCATCTGAGG+AGG | 0.565301 | 2.2:-58065178 | MS.gene02083:CDS |
AGCTATTGCTACAGCACGAA+GGG | 0.567185 | 2.2:+58067218 | None:intergenic |
ATTGTACAACTTCAGCGGTA+CGG | 0.567546 | 2.2:-58065577 | MS.gene02083:CDS |
AGTTGTGCATTTGAAGAGAA+GGG | 0.569161 | 2.2:+58067156 | None:intergenic |
TCGTTGGATCGAAATTGGTA+AGG | 0.570774 | 2.2:+58065475 | None:intergenic |
CAAGTGTTCCTGTAAAAGGA+TGG | 0.579502 | 2.2:+58067129 | None:intergenic |
GTTCCTTTAGGAAGAAGAGA+TGG | 0.584332 | 2.2:-58065887 | MS.gene02083:CDS |
AAATTGGTAAGGTTCGTGCC+AGG | 0.584556 | 2.2:+58065486 | None:intergenic |
CGCACAATATGTCCCAATGG+TGG | 0.600150 | 2.2:-58065510 | MS.gene02083:CDS |
TGCTGAATTATCATCTACAC+TGG | 0.600987 | 2.2:-58066039 | MS.gene02083:intron |
CTCCTCAGATGAATCTGTTG+AGG | 0.607998 | 2.2:+58065179 | None:intergenic |
GAATCAAATCAAAACAGCTG+TGG | 0.608984 | 2.2:-58066111 | MS.gene02083:CDS |
GATGAAATAAAATAGGCAGA+TGG | 0.618837 | 2.2:-58065923 | MS.gene02083:intron |
AGCCGATTGTACAACTTCAG+CGG | 0.631715 | 2.2:-58065582 | MS.gene02083:CDS |
AGCATCTTGTTCACTCACAA+CGG | 0.632766 | 2.2:+58066172 | None:intergenic |
TTGCGCACAATATGTCCCAA+TGG | 0.640051 | 2.2:-58065513 | MS.gene02083:CDS |
GGTGTGTTAACCGGGAACCA+AGG | 0.643371 | 2.2:-58065267 | MS.gene02083:CDS |
TCAACAGATTCATCTGAGGA+GGG | 0.655752 | 2.2:-58065177 | MS.gene02083:CDS |
AAGCTATTGCTACAGCACGA+AGG | 0.675693 | 2.2:+58067217 | None:intergenic |
ACAAGACTAGCAAGCATACG+AGG | 0.681087 | 2.2:+58067051 | None:intergenic |
TGCCTCAACAGATTCATCTG+AGG | 0.692262 | 2.2:-58065181 | MS.gene02083:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGTTTAAAAAATTCTAAT+TGG | - | chr2.2:58066662-58066681 | MS.gene02083:intron | 10.0% |
!! | AAAATATATAGTATAGTTTG+AGG | + | chr2.2:58066380-58066399 | None:intergenic | 15.0% |
!! | TAGCAAATAAGTAATATATT+TGG | - | chr2.2:58065560-58065579 | MS.gene02083:CDS | 15.0% |
!! | TATTGAATTTGAAAATTCAA+TGG | + | chr2.2:58066412-58066431 | None:intergenic | 15.0% |
!!! | ATTTTTCAAAAAAGAAAGAT+TGG | + | chr2.2:58066026-58066045 | None:intergenic | 15.0% |
!!! | TTACTAATTTTGCAATAATT+TGG | + | chr2.2:58065951-58065970 | None:intergenic | 15.0% |
!! | AATTCAAAATCAGTAGAATT+AGG | - | chr2.2:58067167-58067186 | MS.gene02083:CDS | 20.0% |
!! | ATGTACTAATTCTACTTAAA+TGG | + | chr2.2:58065504-58065523 | None:intergenic | 20.0% |
!! | ATTAGTTGTATAACATAGAT+AGG | + | chr2.2:58065603-58065622 | None:intergenic | 20.0% |
!! | TACTAATTAACAAAACAGAA+AGG | + | chr2.2:58065719-58065738 | None:intergenic | 20.0% |
!! | TCATACTACTATAAGATTAT+AGG | + | chr2.2:58065476-58065495 | None:intergenic | 20.0% |
!! | TGTACTAATTCTACTTAAAT+GGG | + | chr2.2:58065503-58065522 | None:intergenic | 20.0% |
!! | TTGAAAAATAAAGTTATCGA+TGG | - | chr2.2:58066037-58066056 | MS.gene02083:intron | 20.0% |
!!! | GTTTTGTGATGAAATAAAAT+AGG | - | chr2.2:58066453-58066472 | MS.gene02083:intron | 20.0% |
! | ATGATCAAAATGGGAAATAT+TGG | - | chr2.2:58067095-58067114 | MS.gene02083:CDS | 25.0% |
! | ATTAGTATATCCGTATATGA+CGG | - | chr2.2:58065732-58065751 | MS.gene02083:intron | 25.0% |
! | TAGTTCTTGTCAAATTTATC+AGG | + | chr2.2:58066936-58066955 | None:intergenic | 25.0% |
! | TATATATGTTTCTCGATTTC+AGG | - | chr2.2:58066738-58066757 | MS.gene02083:intron | 25.0% |
! | TCTAATCTTCAAGTGAAAAA+AGG | - | chr2.2:58066960-58066979 | MS.gene02083:intron | 25.0% |
! | TGAATGAATATGCAAAAACT+AGG | + | chr2.2:58065401-58065420 | None:intergenic | 25.0% |
!! | CTCAAAAAAAGCTTTTTGAT+CGG | + | chr2.2:58067060-58067079 | None:intergenic | 25.0% |
!!! | ACTTAAAAAGTGTTACATAC+CGG | + | chr2.2:58066641-58066660 | None:intergenic | 25.0% |
AAGTAAGTTGTGTTAAGAGT+TGG | + | chr2.2:58066843-58066862 | None:intergenic | 30.0% | |
ATTATGCATGTTATTGTAGC+CGG | + | chr2.2:58066097-58066116 | None:intergenic | 30.0% | |
GATGAAATAAAATAGGCAGA+TGG | - | chr2.2:58066460-58066479 | MS.gene02083:intron | 30.0% | |
GCTATAAATTCTTGACTTCT+TGG | - | chr2.2:58065446-58065465 | MS.gene02083:CDS | 30.0% | |
TACTGACATGTTACATTCAA+TGG | + | chr2.2:58065782-58065801 | None:intergenic | 30.0% | |
! | AGTTGATCAGTAGTATTGAA+AGG | + | chr2.2:58066565-58066584 | None:intergenic | 30.0% |
! | ATTGTTTTCTAATCTCTCCT+TGG | + | chr2.2:58067136-58067155 | None:intergenic | 30.0% |
!! | GAATTTGTTGACAATGCTAA+TGG | + | chr2.2:58067033-58067052 | None:intergenic | 30.0% |
!! | TGACTGACTTTAAAACCTTT+AGG | + | chr2.2:58066063-58066082 | None:intergenic | 30.0% |
!!! | AAGCTTTTTTTGAGAGCTTT+AGG | - | chr2.2:58067066-58067085 | MS.gene02083:CDS | 30.0% |
!!! | AGCTTTTTTTGAGAGCTTTA+GGG | - | chr2.2:58067067-58067086 | MS.gene02083:CDS | 30.0% |
!!! | GATTTTGATTAGCAAGTAAC+TGG | + | chr2.2:58066534-58066553 | None:intergenic | 30.0% |
AAACCATCTCTTCTTCCTAA+AGG | + | chr2.2:58066502-58066521 | None:intergenic | 35.0% | |
AAGTTGTGCATTTGAAGAGA+AGG | + | chr2.2:58065231-58065250 | None:intergenic | 35.0% | |
AATCAAAACAGCTGTGGAAA+AGG | - | chr2.2:58066278-58066297 | MS.gene02083:intron | 35.0% | |
AGGAAGAAGAGATGGTTTAA+CGG | - | chr2.2:58066504-58066523 | MS.gene02083:intron | 35.0% | |
AGTTGTGCATTTGAAGAGAA+GGG | + | chr2.2:58065230-58065249 | None:intergenic | 35.0% | |
AGTTGTGTTAAGAGTTGGAT+CGG | + | chr2.2:58066838-58066857 | None:intergenic | 35.0% | |
CAGAAACTCATTAAGAGGTT+TGG | - | chr2.2:58066242-58066261 | MS.gene02083:intron | 35.0% | |
CCAAACAGAAACTCATTAAG+AGG | - | chr2.2:58066237-58066256 | MS.gene02083:intron | 35.0% | |
CCTCTTAATGAGTTTCTGTT+TGG | + | chr2.2:58066240-58066259 | None:intergenic | 35.0% | |
CGAACAATGGAACTAACATT+TGG | + | chr2.2:58065281-58065300 | None:intergenic | 35.0% | |
GAAATATTGGTGTGTTAACC+GGG | - | chr2.2:58067108-58067127 | MS.gene02083:CDS | 35.0% | |
GAATCAAATCAAAACAGCTG+TGG | - | chr2.2:58066272-58066291 | MS.gene02083:intron | 35.0% | |
GGAAATATTGGTGTGTTAAC+CGG | - | chr2.2:58067107-58067126 | MS.gene02083:CDS | 35.0% | |
GTCAGTCATGTAAAGTTATC+CGG | - | chr2.2:58066075-58066094 | MS.gene02083:CDS | 35.0% | |
TAAAGTTATCGATGGCCTAA+AGG | - | chr2.2:58066045-58066064 | MS.gene02083:CDS | 35.0% | |
TCAAATTTATCAGGAGTCGT+TGG | + | chr2.2:58066927-58066946 | None:intergenic | 35.0% | |
TGCTGAATTATCATCTACAC+TGG | - | chr2.2:58066344-58066363 | MS.gene02083:intron | 35.0% | |
! | AACTTGATCCATCCTTTTAC+AGG | - | chr2.2:58065246-58065265 | MS.gene02083:CDS | 35.0% |
! | ATTTCAGGTGCTCATACATT+TGG | - | chr2.2:58066753-58066772 | MS.gene02083:intron | 35.0% |
! | TATTCGAACTCAAGTTTGCT+AGG | + | chr2.2:58065671-58065690 | None:intergenic | 35.0% |
!! | AATAGCTTTGTGCTGTATTG+TGG | - | chr2.2:58065181-58065200 | MS.gene02083:CDS | 35.0% |
!! | GTGTTGAATGATTAGTTCTG+AGG | + | chr2.2:58065880-58065899 | None:intergenic | 35.0% |
AGCATCTTGTTCACTCACAA+CGG | + | chr2.2:58066214-58066233 | None:intergenic | 40.0% | |
AGGGCTGCTATGATCAAAAT+GGG | - | chr2.2:58067086-58067105 | MS.gene02083:CDS | 40.0% | |
AGTATATCCGTATATGACGG+TGG | - | chr2.2:58065735-58065754 | MS.gene02083:intron | 40.0% | |
ATGTGATCCATGACTGTAAC+AGG | - | chr2.2:58066152-58066171 | MS.gene02083:CDS | 40.0% | |
ATTGTACAACTTCAGCGGTA+CGG | - | chr2.2:58066806-58066825 | MS.gene02083:intron | 40.0% | |
CAAGAGTTGTTCTCAACATC+TGG | - | chr2.2:58066999-58067018 | MS.gene02083:intron | 40.0% | |
CAAGTGTTCCTGTAAAAGGA+TGG | + | chr2.2:58065257-58065276 | None:intergenic | 40.0% | |
CCATTGTTCGTGAAGTCATA+AGG | - | chr2.2:58065291-58065310 | MS.gene02083:CDS | 40.0% | |
CCTTATGACTTCACGAACAA+TGG | + | chr2.2:58065294-58065313 | None:intergenic | 40.0% | |
GTATATCCGTATATGACGGT+GGG | - | chr2.2:58065736-58065755 | MS.gene02083:intron | 40.0% | |
GTTGTGTTAAGAGTTGGATC+GGG | + | chr2.2:58066837-58066856 | None:intergenic | 40.0% | |
TACCGCTGAAGTTGTACAAT+CGG | + | chr2.2:58066806-58066825 | None:intergenic | 40.0% | |
TAGGGCTGCTATGATCAAAA+TGG | - | chr2.2:58067085-58067104 | MS.gene02083:CDS | 40.0% | |
TCAACAGATTCATCTGAGGA+GGG | - | chr2.2:58067206-58067225 | MS.gene02083:CDS | 40.0% | |
TCAGCACAAGAAACTGTGTT+AGG | + | chr2.2:58066309-58066328 | None:intergenic | 40.0% | |
TCGTTGGATCGAAATTGGTA+AGG | + | chr2.2:58066911-58066930 | None:intergenic | 40.0% | |
TGGACAAGTGTTCCTGTAAA+AGG | + | chr2.2:58065261-58065280 | None:intergenic | 40.0% | |
TGTGATCCATGACTGTAACA+GGG | - | chr2.2:58066153-58066172 | MS.gene02083:CDS | 40.0% | |
! | GTTCCTTTAGGAAGAAGAGA+TGG | - | chr2.2:58066496-58066515 | MS.gene02083:intron | 40.0% |
! | TCAGTAGTATTGAAAGGAGC+TGG | + | chr2.2:58066559-58066578 | None:intergenic | 40.0% |
AAATTGGTAAGGTTCGTGCC+AGG | + | chr2.2:58066900-58066919 | None:intergenic | 45.0% | |
AAGCTATTGCTACAGCACGA+AGG | + | chr2.2:58065169-58065188 | None:intergenic | 45.0% | |
ACAAGACTAGCAAGCATACG+AGG | + | chr2.2:58065335-58065354 | None:intergenic | 45.0% | |
ACATAGATAGGAGCAGCACA+AGG | + | chr2.2:58065591-58065610 | None:intergenic | 45.0% | |
AGATTCATCTGAGGAGGGTA+TGG | - | chr2.2:58067211-58067230 | MS.gene02083:CDS | 45.0% | |
AGCCGATTGTACAACTTCAG+CGG | - | chr2.2:58066801-58066820 | MS.gene02083:intron | 45.0% | |
AGCTATTGCTACAGCACGAA+GGG | + | chr2.2:58065168-58065187 | None:intergenic | 45.0% | |
AGGAGTCGTTGGATCGAAAT+TGG | + | chr2.2:58066916-58066935 | None:intergenic | 45.0% | |
AGGTCTCGATACTACTGATC+TGG | - | chr2.2:58066606-58066625 | MS.gene02083:intron | 45.0% | |
ATTGTGGTTGTGCTTGTGCT+TGG | - | chr2.2:58065197-58065216 | MS.gene02083:CDS | 45.0% | |
CTCAACAGATTCATCTGAGG+AGG | - | chr2.2:58067205-58067224 | MS.gene02083:CDS | 45.0% | |
CTCCTCAGATGAATCTGTTG+AGG | + | chr2.2:58067207-58067226 | None:intergenic | 45.0% | |
TCACAACCCTGTTACAGTCA+TGG | + | chr2.2:58066162-58066181 | None:intergenic | 45.0% | |
TCTAATCTCTCCTTGGTTCC+CGG | + | chr2.2:58067129-58067148 | None:intergenic | 45.0% | |
TGCCTCAACAGATTCATCTG+AGG | - | chr2.2:58067202-58067221 | MS.gene02083:CDS | 45.0% | |
TTGCGCACAATATGTCCCAA+TGG | - | chr2.2:58066870-58066889 | MS.gene02083:intron | 45.0% | |
TTGTACAACTTCAGCGGTAC+GGG | - | chr2.2:58066807-58066826 | MS.gene02083:intron | 45.0% | |
! | AAAGCTGCATTTGCTGCTCA+AGG | - | chr2.2:58066586-58066605 | MS.gene02083:intron | 45.0% |
!! | GTATGCTTGCTAGTCTTGTC+AGG | - | chr2.2:58065336-58065355 | MS.gene02083:CDS | 45.0% |
!!! | TTATAATGTATATTTTTTTT+CGG | + | chr2.2:58065834-58065853 | None:intergenic | 5.0% |
AATAGGCAGATGGTCCTGAC+TGG | - | chr2.2:58066470-58066489 | MS.gene02083:intron | 50.0% | |
ACTGATCTGGTTGCACTCTC+CGG | - | chr2.2:58066619-58066638 | MS.gene02083:intron | 50.0% | |
ATATGACGGTGGGTCGAACA+AGG | - | chr2.2:58065746-58065765 | MS.gene02083:intron | 50.0% | |
CCTAAAGGAACCTTCCAGTC+AGG | + | chr2.2:58066487-58066506 | None:intergenic | 50.0% | |
CCTGACTGGAAGGTTCCTTT+AGG | - | chr2.2:58066484-58066503 | MS.gene02083:intron | 50.0% | |
CGCACAATATGTCCCAATGG+TGG | - | chr2.2:58066873-58066892 | MS.gene02083:intron | 50.0% | |
GTTCGACCCACCGTCATATA+CGG | + | chr2.2:58065745-58065764 | None:intergenic | 50.0% | |
TGGTTGTGCTTGTGCTTGGA+GGG | - | chr2.2:58065201-58065220 | MS.gene02083:CDS | 50.0% | |
!! | ATATGTCCCAATGGTGGACC+TGG | - | chr2.2:58066879-58066898 | MS.gene02083:intron | 50.0% |
GGTGTGTTAACCGGGAACCA+AGG | - | chr2.2:58067116-58067135 | MS.gene02083:CDS | 55.0% | |
GTGGTTGTGCTTGTGCTTGG+AGG | - | chr2.2:58065200-58065219 | MS.gene02083:CDS | 55.0% | |
TTCGTGCCAGGTCCACCATT+GGG | + | chr2.2:58066888-58066907 | None:intergenic | 55.0% | |
GGCAGATGGTCCTGACTGGA+AGG | - | chr2.2:58066474-58066493 | MS.gene02083:intron | 60.0% | |
GTTCGTGCCAGGTCCACCAT+TGG | + | chr2.2:58066889-58066908 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 58065158 | 58067247 | 58065158 | ID=MS.gene02083 |
chr2.2 | mRNA | 58065158 | 58067247 | 58065158 | ID=MS.gene02083.t1;Parent=MS.gene02083 |
chr2.2 | exon | 58067020 | 58067247 | 58067020 | ID=MS.gene02083.t1.exon1;Parent=MS.gene02083.t1 |
chr2.2 | CDS | 58067020 | 58067247 | 58067020 | ID=cds.MS.gene02083.t1;Parent=MS.gene02083.t1 |
chr2.2 | exon | 58066040 | 58066231 | 58066040 | ID=MS.gene02083.t1.exon2;Parent=MS.gene02083.t1 |
chr2.2 | CDS | 58066040 | 58066231 | 58066040 | ID=cds.MS.gene02083.t1;Parent=MS.gene02083.t1 |
chr2.2 | exon | 58065765 | 58065930 | 58065765 | ID=MS.gene02083.t1.exon3;Parent=MS.gene02083.t1 |
chr2.2 | CDS | 58065765 | 58065930 | 58065765 | ID=cds.MS.gene02083.t1;Parent=MS.gene02083.t1 |
chr2.2 | exon | 58065158 | 58065645 | 58065158 | ID=MS.gene02083.t1.exon4;Parent=MS.gene02083.t1 |
chr2.2 | CDS | 58065158 | 58065645 | 58065158 | ID=cds.MS.gene02083.t1;Parent=MS.gene02083.t1 |
Gene Sequence |
Protein sequence |