Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003286.t1 | AAB41811.1 | 100 | 353 | 0 | 0 | 1 | 353 | 1 | 353 | 3.20E-199 | 704.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003286.t1 | Q9LEH3 | 63.5 | 307 | 111 | 1 | 26 | 331 | 21 | 327 | 4.4e-104 | 379.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003286.t1 | Q40366 | 100.0 | 353 | 0 | 0 | 1 | 353 | 1 | 353 | 2.3e-199 | 704.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003286.t1 | MTR_2g029850 | 95.714 | 350 | 15 | 0 | 4 | 353 | 3 | 352 | 0.0 | 689 |
MS.gene003286.t1 | MTR_2g029860 | 77.077 | 349 | 77 | 3 | 7 | 353 | 6 | 353 | 0.0 | 540 |
MS.gene003286.t1 | MTR_2g029820 | 73.043 | 345 | 90 | 1 | 11 | 352 | 10 | 354 | 0.0 | 522 |
MS.gene003286.t1 | MTR_2g029910 | 73.729 | 354 | 91 | 2 | 1 | 353 | 1 | 353 | 0.0 | 521 |
MS.gene003286.t1 | MTR_2g029800 | 71.875 | 352 | 94 | 2 | 4 | 352 | 3 | 352 | 0.0 | 514 |
MS.gene003286.t1 | MTR_2g029815 | 71.930 | 342 | 96 | 0 | 11 | 352 | 10 | 351 | 0.0 | 507 |
MS.gene003286.t1 | MTR_2g029830 | 72.372 | 333 | 88 | 2 | 23 | 351 | 21 | 353 | 2.65e-173 | 486 |
MS.gene003286.t1 | MTR_2g028980 | 66.193 | 352 | 116 | 1 | 4 | 352 | 3 | 354 | 9.52e-168 | 472 |
MS.gene003286.t1 | MTR_2g029740 | 65.909 | 352 | 117 | 1 | 4 | 352 | 3 | 354 | 6.46e-167 | 469 |
MS.gene003286.t1 | MTR_2g029750 | 64.489 | 352 | 121 | 2 | 4 | 352 | 3 | 353 | 5.65e-161 | 454 |
MS.gene003286.t1 | MTR_2g029730 | 64.826 | 344 | 111 | 3 | 10 | 352 | 10 | 344 | 4.44e-154 | 437 |
MS.gene003286.t1 | MTR_2g029560 | 61.823 | 351 | 124 | 3 | 4 | 353 | 3 | 344 | 4.90e-151 | 429 |
MS.gene003286.t1 | MTR_2g029830 | 72.598 | 281 | 73 | 2 | 75 | 351 | 5 | 285 | 3.45e-144 | 409 |
MS.gene003286.t1 | MTR_7g093370 | 60.065 | 308 | 122 | 1 | 26 | 332 | 65 | 372 | 3.28e-128 | 372 |
MS.gene003286.t1 | MTR_1g054205 | 58.333 | 312 | 129 | 1 | 22 | 332 | 16 | 327 | 1.69e-124 | 361 |
MS.gene003286.t1 | MTR_2g029880 | 72.430 | 214 | 48 | 3 | 140 | 353 | 7 | 209 | 7.97e-104 | 304 |
MS.gene003286.t1 | MTR_4g125940 | 50.784 | 319 | 153 | 2 | 15 | 331 | 13 | 329 | 1.31e-102 | 305 |
MS.gene003286.t1 | MTR_8g076820 | 50.000 | 298 | 148 | 1 | 34 | 331 | 34 | 330 | 4.98e-100 | 299 |
MS.gene003286.t1 | MTR_5g021060 | 49.329 | 298 | 150 | 1 | 34 | 331 | 34 | 330 | 1.80e-98 | 295 |
MS.gene003286.t1 | MTR_2g084080 | 47.531 | 324 | 161 | 2 | 8 | 331 | 3 | 317 | 5.77e-98 | 293 |
MS.gene003286.t1 | MTR_1g022970 | 49.007 | 302 | 154 | 0 | 30 | 331 | 46 | 347 | 9.11e-98 | 293 |
MS.gene003286.t1 | MTR_2g084110 | 48.615 | 325 | 156 | 3 | 8 | 331 | 3 | 317 | 3.66e-97 | 291 |
MS.gene003286.t1 | MTR_7g072510 | 45.938 | 320 | 156 | 3 | 12 | 331 | 10 | 312 | 9.03e-97 | 290 |
MS.gene003286.t1 | MTR_2g040000 | 48.693 | 306 | 152 | 2 | 29 | 331 | 28 | 331 | 8.25e-95 | 285 |
MS.gene003286.t1 | MTR_3g094650 | 48.297 | 323 | 152 | 4 | 7 | 327 | 9 | 318 | 3.92e-94 | 283 |
MS.gene003286.t1 | MTR_2g084090 | 46.769 | 325 | 163 | 3 | 8 | 331 | 3 | 318 | 4.57e-94 | 283 |
MS.gene003286.t1 | MTR_5g017850 | 47.869 | 305 | 155 | 3 | 28 | 331 | 25 | 326 | 5.30e-94 | 283 |
MS.gene003286.t1 | MTR_5g017860 | 47.869 | 305 | 155 | 3 | 28 | 331 | 25 | 326 | 5.97e-94 | 283 |
MS.gene003286.t1 | MTR_4g125940 | 53.818 | 275 | 123 | 2 | 59 | 331 | 2 | 274 | 2.25e-93 | 280 |
MS.gene003286.t1 | MTR_2g084020 | 45.988 | 324 | 167 | 2 | 8 | 331 | 3 | 318 | 4.28e-93 | 281 |
MS.gene003286.t1 | MTR_4g029170 | 48.113 | 318 | 154 | 4 | 16 | 331 | 13 | 321 | 4.56e-93 | 281 |
MS.gene003286.t1 | MTR_3g072190 | 48.515 | 303 | 147 | 2 | 29 | 331 | 25 | 318 | 1.43e-92 | 279 |
MS.gene003286.t1 | MTR_3g466200 | 46.914 | 324 | 156 | 5 | 11 | 331 | 10 | 320 | 6.90e-92 | 278 |
MS.gene003286.t1 | MTR_7g072480 | 47.619 | 315 | 156 | 2 | 17 | 331 | 11 | 316 | 7.62e-92 | 277 |
MS.gene003286.t1 | MTR_2g084010 | 46.296 | 324 | 166 | 2 | 8 | 331 | 3 | 318 | 1.15e-91 | 277 |
MS.gene003286.t1 | MTR_4g029200 | 47.588 | 311 | 152 | 4 | 22 | 331 | 38 | 338 | 1.22e-91 | 278 |
MS.gene003286.t1 | MTR_4g029180 | 49.333 | 300 | 141 | 4 | 34 | 331 | 31 | 321 | 6.45e-91 | 275 |
MS.gene003286.t1 | MTR_2g088770 | 46.226 | 318 | 165 | 5 | 16 | 331 | 12 | 325 | 1.34e-90 | 275 |
MS.gene003286.t1 | MTR_4g083710 | 46.395 | 319 | 161 | 3 | 16 | 331 | 13 | 324 | 3.77e-89 | 271 |
MS.gene003286.t1 | MTR_5g014100 | 45.752 | 306 | 162 | 2 | 30 | 331 | 26 | 331 | 3.26e-87 | 266 |
MS.gene003286.t1 | MTR_5g074970 | 45.399 | 326 | 161 | 5 | 12 | 331 | 12 | 326 | 4.07e-87 | 266 |
MS.gene003286.t1 | MTR_2g084000 | 46.078 | 306 | 155 | 3 | 27 | 331 | 23 | 319 | 1.02e-86 | 265 |
MS.gene003286.t1 | MTR_4g029190 | 46.753 | 308 | 152 | 5 | 27 | 331 | 42 | 340 | 4.80e-85 | 261 |
MS.gene003286.t1 | MTR_4g114210 | 44.375 | 320 | 166 | 6 | 17 | 331 | 8 | 320 | 2.59e-84 | 258 |
MS.gene003286.t1 | MTR_3g094670 | 46.130 | 323 | 159 | 4 | 7 | 327 | 9 | 318 | 3.82e-84 | 258 |
MS.gene003286.t1 | MTR_1g115900 | 43.302 | 321 | 171 | 5 | 14 | 332 | 11 | 322 | 4.69e-84 | 258 |
MS.gene003286.t1 | MTR_4g122640 | 41.593 | 339 | 179 | 5 | 7 | 331 | 3 | 336 | 1.15e-83 | 257 |
MS.gene003286.t1 | MTR_4g074995 | 44.514 | 319 | 154 | 4 | 16 | 331 | 10 | 308 | 2.22e-83 | 255 |
MS.gene003286.t1 | MTR_5g083860 | 44.311 | 334 | 165 | 7 | 5 | 331 | 6 | 325 | 2.30e-83 | 256 |
MS.gene003286.t1 | MTR_4g046713 | 42.056 | 321 | 178 | 5 | 12 | 331 | 13 | 326 | 3.54e-83 | 256 |
MS.gene003286.t1 | MTR_3g094630 | 45.872 | 327 | 162 | 4 | 7 | 331 | 9 | 322 | 8.56e-83 | 254 |
MS.gene003286.t1 | MTR_5g074860 | 45.652 | 322 | 164 | 5 | 12 | 330 | 11 | 324 | 1.45e-82 | 254 |
MS.gene003286.t1 | MTR_7g107520 | 42.500 | 320 | 178 | 4 | 12 | 331 | 7 | 320 | 6.94e-82 | 252 |
MS.gene003286.t1 | MTR_5g049280 | 41.905 | 315 | 172 | 6 | 24 | 331 | 27 | 337 | 1.01e-81 | 252 |
MS.gene003286.t1 | MTR_4g030890 | 42.997 | 307 | 170 | 3 | 25 | 331 | 95 | 396 | 2.10e-81 | 254 |
MS.gene003286.t1 | MTR_3g467600 | 45.631 | 309 | 158 | 4 | 26 | 331 | 23 | 324 | 3.62e-81 | 250 |
MS.gene003286.t1 | MTR_5g074760 | 42.560 | 336 | 177 | 5 | 1 | 333 | 1 | 323 | 3.29e-80 | 248 |
MS.gene003286.t1 | MTR_3g092990 | 40.184 | 326 | 189 | 3 | 7 | 331 | 6 | 326 | 1.05e-79 | 247 |
MS.gene003286.t1 | MTR_5g074740 | 44.300 | 307 | 160 | 4 | 28 | 331 | 23 | 321 | 1.16e-79 | 246 |
MS.gene003286.t1 | MTR_3g466180 | 42.857 | 315 | 171 | 2 | 17 | 331 | 18 | 323 | 1.33e-79 | 246 |
MS.gene003286.t1 | MTR_4g031140 | 41.806 | 299 | 169 | 3 | 34 | 332 | 32 | 325 | 1.75e-79 | 247 |
MS.gene003286.t1 | MTR_4g074990 | 42.814 | 334 | 155 | 6 | 1 | 331 | 5 | 305 | 6.09e-79 | 244 |
MS.gene003286.t1 | MTR_1g086320 | 39.577 | 331 | 189 | 5 | 7 | 331 | 8 | 333 | 6.54e-79 | 245 |
MS.gene003286.t1 | MTR_1g086490 | 39.286 | 336 | 190 | 5 | 7 | 331 | 8 | 340 | 3.21e-78 | 243 |
MS.gene003286.t1 | MTR_5g074710 | 44.300 | 307 | 160 | 4 | 28 | 331 | 23 | 321 | 5.09e-78 | 242 |
MS.gene003286.t1 | MTR_4g133800 | 43.000 | 300 | 156 | 7 | 35 | 331 | 46 | 333 | 6.58e-78 | 242 |
MS.gene003286.t1 | MTR_8g075100 | 42.222 | 315 | 158 | 9 | 25 | 331 | 21 | 319 | 6.65e-78 | 242 |
MS.gene003286.t1 | MTR_2g008710 | 42.667 | 300 | 165 | 4 | 34 | 331 | 31 | 325 | 1.98e-77 | 241 |
MS.gene003286.t1 | MTR_7g026990 | 41.424 | 309 | 170 | 5 | 25 | 332 | 25 | 323 | 4.43e-77 | 240 |
MS.gene003286.t1 | MTR_5g016010 | 40.060 | 332 | 190 | 5 | 3 | 330 | 2 | 328 | 7.94e-77 | 239 |
MS.gene003286.t1 | MTR_6g043280 | 44.620 | 316 | 153 | 7 | 18 | 331 | 37 | 332 | 6.57e-76 | 237 |
MS.gene003286.t1 | MTR_0155s0040 | 39.875 | 321 | 174 | 6 | 11 | 331 | 14 | 315 | 8.42e-76 | 236 |
MS.gene003286.t1 | MTR_2g437770 | 42.089 | 316 | 167 | 7 | 22 | 332 | 38 | 342 | 1.54e-75 | 236 |
MS.gene003286.t1 | MTR_3g072190 | 48.263 | 259 | 125 | 2 | 73 | 331 | 2 | 251 | 2.36e-75 | 233 |
MS.gene003286.t1 | MTR_7g086820 | 40.461 | 304 | 172 | 5 | 28 | 331 | 18 | 312 | 3.82e-75 | 234 |
MS.gene003286.t1 | MTR_5g022870 | 40.584 | 308 | 173 | 7 | 25 | 331 | 18 | 316 | 1.41e-74 | 233 |
MS.gene003286.t1 | MTR_4g074980 | 41.994 | 331 | 151 | 6 | 1 | 331 | 5 | 294 | 8.55e-74 | 230 |
MS.gene003286.t1 | MTR_4g132490 | 39.394 | 330 | 192 | 5 | 5 | 331 | 3 | 327 | 2.06e-73 | 231 |
MS.gene003286.t1 | MTR_1g009750 | 40.656 | 305 | 177 | 2 | 29 | 331 | 26 | 328 | 5.71e-72 | 227 |
MS.gene003286.t1 | MTR_1g101830 | 39.216 | 306 | 180 | 4 | 26 | 331 | 23 | 322 | 5.80e-72 | 227 |
MS.gene003286.t1 | MTR_6g043240 | 42.415 | 323 | 168 | 8 | 30 | 349 | 42 | 349 | 5.97e-72 | 228 |
MS.gene003286.t1 | MTR_4g087965 | 41.311 | 305 | 172 | 5 | 29 | 328 | 41 | 343 | 1.61e-71 | 226 |
MS.gene003286.t1 | MTR_1g038680 | 40.264 | 303 | 173 | 5 | 34 | 331 | 33 | 332 | 9.11e-71 | 224 |
MS.gene003286.t1 | MTR_1g077000 | 39.735 | 302 | 169 | 5 | 30 | 331 | 39 | 327 | 1.36e-70 | 223 |
MS.gene003286.t1 | MTR_1g025980 | 40.391 | 307 | 164 | 7 | 30 | 330 | 24 | 317 | 1.35e-69 | 221 |
MS.gene003286.t1 | MTR_4g127670 | 42.193 | 301 | 168 | 3 | 29 | 327 | 23 | 319 | 1.85e-69 | 220 |
MS.gene003286.t1 | MTR_7g029030 | 39.088 | 307 | 181 | 2 | 25 | 331 | 20 | 320 | 5.43e-69 | 219 |
MS.gene003286.t1 | MTR_4g074980 | 44.318 | 264 | 129 | 4 | 1 | 261 | 5 | 253 | 7.61e-68 | 214 |
MS.gene003286.t1 | MTR_3g092990 | 38.037 | 326 | 185 | 4 | 7 | 331 | 6 | 315 | 8.85e-68 | 216 |
MS.gene003286.t1 | MTR_6g043460 | 42.000 | 300 | 161 | 6 | 30 | 327 | 36 | 324 | 5.86e-67 | 214 |
MS.gene003286.t1 | MTR_1g090760 | 36.283 | 339 | 207 | 5 | 1 | 335 | 1 | 334 | 6.52e-67 | 214 |
MS.gene003286.t1 | MTR_2g008160 | 40.836 | 311 | 172 | 7 | 26 | 331 | 20 | 323 | 1.67e-66 | 213 |
MS.gene003286.t1 | MTR_4g095450 | 39.806 | 309 | 176 | 4 | 22 | 327 | 19 | 320 | 6.84e-66 | 211 |
MS.gene003286.t1 | MTR_7g086870 | 39.145 | 304 | 173 | 6 | 28 | 331 | 20 | 311 | 1.89e-64 | 207 |
MS.gene003286.t1 | MTR_6g027440 | 38.080 | 323 | 191 | 6 | 9 | 331 | 1 | 314 | 5.82e-64 | 206 |
MS.gene003286.t1 | MTR_2g099175 | 37.662 | 308 | 180 | 6 | 29 | 331 | 35 | 335 | 1.05e-62 | 203 |
MS.gene003286.t1 | MTR_5g074860 | 39.130 | 322 | 146 | 4 | 12 | 330 | 11 | 285 | 3.89e-62 | 200 |
MS.gene003286.t1 | MTR_0147s0010 | 37.346 | 324 | 167 | 5 | 27 | 330 | 74 | 381 | 4.14e-62 | 203 |
MS.gene003286.t1 | MTR_8g062780 | 35.849 | 318 | 199 | 4 | 16 | 331 | 10 | 324 | 6.44e-62 | 201 |
MS.gene003286.t1 | MTR_1g009750 | 37.049 | 305 | 171 | 3 | 29 | 331 | 26 | 311 | 1.68e-61 | 199 |
MS.gene003286.t1 | MTR_3g105790 | 39.806 | 309 | 178 | 4 | 25 | 331 | 20 | 322 | 2.36e-61 | 199 |
MS.gene003286.t1 | MTR_2g067440 | 34.615 | 364 | 197 | 8 | 3 | 330 | 28 | 386 | 4.54e-61 | 201 |
MS.gene003286.t1 | MTR_2g078610 | 34.188 | 351 | 192 | 6 | 15 | 328 | 55 | 403 | 8.97e-60 | 198 |
MS.gene003286.t1 | MTR_2g077990 | 34.758 | 351 | 188 | 7 | 15 | 327 | 55 | 402 | 3.58e-59 | 196 |
MS.gene003286.t1 | MTR_5g033470 | 34.185 | 313 | 193 | 7 | 27 | 331 | 70 | 377 | 8.74e-58 | 192 |
MS.gene003286.t1 | MTR_2g067450 | 37.061 | 313 | 175 | 7 | 28 | 330 | 9 | 309 | 1.65e-55 | 184 |
MS.gene003286.t1 | MTR_2g008730 | 35.474 | 327 | 179 | 5 | 8 | 331 | 4 | 301 | 1.91e-55 | 183 |
MS.gene003286.t1 | MTR_2g078280 | 34.897 | 341 | 181 | 8 | 15 | 317 | 55 | 392 | 6.23e-55 | 185 |
MS.gene003286.t1 | MTR_0286s0010 | 34.516 | 310 | 194 | 6 | 26 | 331 | 30 | 334 | 8.23e-55 | 183 |
MS.gene003286.t1 | MTR_6g008075 | 34.516 | 310 | 194 | 6 | 26 | 331 | 30 | 334 | 8.23e-55 | 183 |
MS.gene003286.t1 | MTR_1g066710 | 35.599 | 309 | 188 | 5 | 28 | 333 | 25 | 325 | 1.67e-54 | 182 |
MS.gene003286.t1 | MTR_1g066680 | 36.538 | 312 | 180 | 6 | 28 | 333 | 25 | 324 | 2.44e-54 | 181 |
MS.gene003286.t1 | MTR_1g066380 | 34.936 | 312 | 186 | 5 | 28 | 333 | 25 | 325 | 4.97e-53 | 178 |
MS.gene003286.t1 | MTR_1g066640 | 35.897 | 312 | 183 | 5 | 28 | 333 | 25 | 325 | 8.38e-53 | 177 |
MS.gene003286.t1 | MTR_4g132110 | 35.443 | 316 | 183 | 6 | 26 | 331 | 24 | 328 | 3.58e-52 | 176 |
MS.gene003286.t1 | MTR_4g132110 | 35.202 | 321 | 182 | 8 | 26 | 331 | 24 | 333 | 3.38e-50 | 171 |
MS.gene003286.t1 | MTR_2g008160 | 35.370 | 311 | 154 | 7 | 26 | 331 | 20 | 288 | 7.19e-49 | 166 |
MS.gene003286.t1 | MTR_1g066380 | 36.466 | 266 | 152 | 5 | 74 | 333 | 3 | 257 | 5.37e-44 | 152 |
MS.gene003286.t1 | MTR_2g008160 | 45.402 | 174 | 91 | 3 | 26 | 199 | 20 | 189 | 5.57e-44 | 150 |
MS.gene003286.t1 | MTR_5g074700 | 40.517 | 232 | 113 | 6 | 103 | 331 | 5 | 214 | 2.02e-43 | 149 |
MS.gene003286.t1 | MTR_3g072210 | 46.073 | 191 | 94 | 4 | 142 | 331 | 56 | 238 | 2.09e-43 | 150 |
MS.gene003286.t1 | MTR_3g105790 | 39.506 | 243 | 142 | 3 | 91 | 331 | 7 | 246 | 2.75e-43 | 150 |
MS.gene003286.t1 | MTR_7g072490 | 38.000 | 250 | 92 | 4 | 75 | 324 | 1 | 187 | 1.67e-39 | 139 |
MS.gene003286.t1 | MTR_3g072260 | 55.833 | 120 | 51 | 1 | 29 | 148 | 25 | 142 | 5.98e-37 | 130 |
MS.gene003286.t1 | MTR_2g029930 | 57.522 | 113 | 20 | 3 | 15 | 113 | 4 | 102 | 5.30e-32 | 116 |
MS.gene003286.t1 | MTR_2g078560 | 30.973 | 226 | 123 | 5 | 136 | 330 | 96 | 319 | 2.27e-26 | 107 |
MS.gene003286.t1 | MTR_7g086790 | 34.010 | 197 | 106 | 5 | 77 | 272 | 17 | 190 | 8.57e-26 | 102 |
MS.gene003286.t1 | MTR_5g058120 | 39.877 | 163 | 85 | 3 | 165 | 327 | 6 | 155 | 1.34e-25 | 103 |
MS.gene003286.t1 | MTR_2g077980 | 30.483 | 269 | 144 | 8 | 99 | 328 | 17 | 281 | 1.08e-24 | 102 |
MS.gene003286.t1 | MTR_1g089005 | 38.931 | 131 | 66 | 3 | 15 | 139 | 7 | 129 | 8.50e-20 | 85.5 |
MS.gene003286.t1 | MTR_3g462850 | 35.172 | 145 | 83 | 6 | 194 | 331 | 9 | 149 | 3.49e-17 | 78.2 |
MS.gene003286.t1 | MTR_6g048160 | 54.930 | 71 | 28 | 2 | 69 | 139 | 22 | 88 | 3.83e-17 | 76.3 |
MS.gene003286.t1 | MTR_4g012865 | 50.746 | 67 | 33 | 0 | 27 | 93 | 74 | 140 | 4.26e-17 | 77.8 |
MS.gene003286.t1 | MTR_4g114220 | 51.282 | 78 | 28 | 2 | 57 | 134 | 30 | 97 | 2.15e-16 | 75.5 |
MS.gene003286.t1 | MTR_1g098320 | 46.988 | 83 | 42 | 1 | 252 | 334 | 47 | 127 | 1.37e-15 | 73.2 |
MS.gene003286.t1 | MTR_7g107500 | 44.444 | 99 | 51 | 3 | 233 | 331 | 3 | 97 | 1.38e-14 | 69.3 |
MS.gene003286.t1 | MTR_4g031040 | 30.814 | 172 | 75 | 3 | 92 | 263 | 4 | 131 | 5.70e-14 | 68.6 |
MS.gene003286.t1 | MTR_3g107060 | 25.373 | 268 | 150 | 9 | 45 | 310 | 91 | 310 | 1.44e-12 | 68.2 |
MS.gene003286.t1 | MTR_7g086810 | 30.579 | 121 | 58 | 1 | 28 | 148 | 4 | 98 | 2.26e-12 | 66.2 |
MS.gene003286.t1 | MTR_5g074770 | 39.535 | 86 | 51 | 1 | 245 | 330 | 24 | 108 | 1.15e-11 | 61.2 |
MS.gene003286.t1 | MTR_7g086785 | 31.618 | 136 | 86 | 3 | 75 | 207 | 3 | 134 | 8.28e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003286.t1 | AT5G06720 | 57.862 | 318 | 134 | 0 | 15 | 332 | 17 | 334 | 9.18e-128 | 370 |
MS.gene003286.t1 | AT5G06730 | 54.896 | 337 | 152 | 0 | 15 | 351 | 18 | 354 | 4.30e-127 | 369 |
MS.gene003286.t1 | AT3G49120 | 55.963 | 327 | 139 | 3 | 15 | 336 | 14 | 340 | 3.24e-123 | 358 |
MS.gene003286.t1 | AT4G08770 | 55.911 | 313 | 136 | 2 | 26 | 336 | 20 | 332 | 5.73e-123 | 358 |
MS.gene003286.t1 | AT3G49110 | 57.827 | 313 | 130 | 2 | 26 | 336 | 29 | 341 | 7.26e-123 | 358 |
MS.gene003286.t1 | AT2G38380 | 53.354 | 328 | 146 | 2 | 26 | 352 | 27 | 348 | 1.15e-121 | 355 |
MS.gene003286.t1 | AT2G38390 | 52.744 | 328 | 148 | 2 | 26 | 352 | 27 | 348 | 5.59e-120 | 350 |
MS.gene003286.t1 | AT4G08780 | 54.633 | 313 | 140 | 2 | 26 | 336 | 20 | 332 | 7.01e-120 | 350 |
MS.gene003286.t1 | AT3G32980 | 55.911 | 313 | 136 | 2 | 26 | 336 | 27 | 339 | 1.49e-119 | 349 |
MS.gene003286.t1 | AT5G19880 | 51.456 | 309 | 147 | 2 | 26 | 331 | 21 | 329 | 5.56e-106 | 314 |
MS.gene003286.t1 | AT5G66390 | 46.407 | 334 | 175 | 2 | 1 | 331 | 1 | 333 | 1.47e-101 | 303 |
MS.gene003286.t1 | AT2G18150 | 50.336 | 298 | 147 | 1 | 34 | 331 | 40 | 336 | 1.76e-100 | 300 |
MS.gene003286.t1 | AT2G18140 | 50.671 | 298 | 146 | 1 | 34 | 331 | 39 | 335 | 3.68e-100 | 299 |
MS.gene003286.t1 | AT4G36430 | 48.860 | 307 | 156 | 1 | 25 | 331 | 25 | 330 | 4.07e-99 | 296 |
MS.gene003286.t1 | AT3G50990 | 47.883 | 307 | 159 | 1 | 25 | 331 | 36 | 341 | 9.06e-98 | 293 |
MS.gene003286.t1 | AT1G44970 | 47.022 | 319 | 161 | 1 | 21 | 331 | 28 | 346 | 4.18e-97 | 292 |
MS.gene003286.t1 | AT5G19890 | 48.693 | 306 | 149 | 4 | 28 | 331 | 28 | 327 | 2.92e-92 | 279 |
MS.gene003286.t1 | AT5G05340 | 47.712 | 306 | 149 | 3 | 28 | 331 | 28 | 324 | 9.44e-91 | 275 |
MS.gene003286.t1 | AT1G14540 | 46.372 | 317 | 163 | 3 | 15 | 331 | 6 | 315 | 2.03e-90 | 274 |
MS.gene003286.t1 | AT1G14550 | 48.039 | 306 | 151 | 3 | 27 | 331 | 23 | 321 | 3.37e-90 | 273 |
MS.gene003286.t1 | AT1G49570 | 48.197 | 305 | 153 | 3 | 28 | 329 | 46 | 348 | 4.99e-90 | 274 |
MS.gene003286.t1 | AT4G16270 | 46.865 | 303 | 156 | 4 | 30 | 331 | 50 | 348 | 8.28e-89 | 271 |
MS.gene003286.t1 | AT2G41480 | 43.027 | 337 | 173 | 7 | 5 | 331 | 1 | 328 | 2.88e-85 | 261 |
MS.gene003286.t1 | AT4G11290 | 43.260 | 319 | 177 | 3 | 15 | 331 | 10 | 326 | 8.46e-85 | 260 |
MS.gene003286.t1 | AT3G03670 | 43.421 | 304 | 169 | 2 | 28 | 331 | 21 | 321 | 2.74e-84 | 258 |
MS.gene003286.t1 | AT1G68850 | 43.564 | 303 | 165 | 5 | 34 | 331 | 34 | 335 | 7.35e-84 | 258 |
MS.gene003286.t1 | AT5G58390 | 44.937 | 316 | 162 | 4 | 15 | 327 | 6 | 312 | 9.29e-84 | 257 |
MS.gene003286.t1 | AT2G22420 | 43.960 | 298 | 162 | 3 | 34 | 331 | 27 | 319 | 3.00e-83 | 256 |
MS.gene003286.t1 | AT3G21770 | 43.730 | 311 | 169 | 5 | 19 | 327 | 18 | 324 | 7.79e-83 | 255 |
MS.gene003286.t1 | AT1G71695 | 44.410 | 322 | 167 | 6 | 30 | 349 | 44 | 355 | 8.12e-83 | 256 |
MS.gene003286.t1 | AT2G35380 | 46.078 | 306 | 161 | 3 | 30 | 331 | 30 | 335 | 1.04e-82 | 255 |
MS.gene003286.t1 | AT1G05260 | 41.337 | 329 | 187 | 5 | 5 | 331 | 1 | 325 | 5.15e-82 | 253 |
MS.gene003286.t1 | AT5G58400 | 44.201 | 319 | 163 | 5 | 16 | 331 | 19 | 325 | 9.49e-81 | 249 |
MS.gene003286.t1 | AT5G17820 | 42.105 | 304 | 164 | 5 | 28 | 331 | 22 | 313 | 4.64e-80 | 247 |
MS.gene003286.t1 | AT5G15180 | 41.748 | 309 | 171 | 5 | 26 | 331 | 27 | 329 | 1.21e-79 | 247 |
MS.gene003286.t1 | AT5G64120 | 41.390 | 331 | 183 | 6 | 4 | 331 | 6 | 328 | 5.28e-79 | 245 |
MS.gene003286.t1 | AT5G17820 | 42.105 | 304 | 164 | 5 | 28 | 331 | 75 | 366 | 8.90e-79 | 246 |
MS.gene003286.t1 | AT2G18980 | 43.168 | 322 | 170 | 5 | 16 | 331 | 9 | 323 | 1.71e-78 | 243 |
MS.gene003286.t1 | AT4G30170 | 42.718 | 309 | 166 | 4 | 27 | 331 | 24 | 325 | 3.52e-78 | 243 |
MS.gene003286.t1 | AT5G14130 | 42.947 | 319 | 171 | 6 | 19 | 331 | 17 | 330 | 1.32e-77 | 241 |
MS.gene003286.t1 | AT5G14130 | 42.947 | 319 | 171 | 6 | 19 | 331 | 58 | 371 | 3.02e-77 | 242 |
MS.gene003286.t1 | AT4G37530 | 43.871 | 310 | 167 | 5 | 26 | 331 | 23 | 329 | 9.65e-77 | 239 |
MS.gene003286.t1 | AT5G39580 | 42.169 | 332 | 170 | 8 | 4 | 331 | 6 | 319 | 1.17e-76 | 239 |
MS.gene003286.t1 | AT1G05240 | 41.883 | 308 | 165 | 5 | 30 | 331 | 26 | 325 | 4.47e-76 | 238 |
MS.gene003286.t1 | AT1G05250 | 41.883 | 308 | 165 | 5 | 30 | 331 | 26 | 325 | 4.47e-76 | 238 |
MS.gene003286.t1 | AT3G01190 | 40.994 | 322 | 175 | 9 | 14 | 331 | 11 | 321 | 4.70e-76 | 237 |
MS.gene003286.t1 | AT5G51890 | 39.763 | 337 | 182 | 8 | 1 | 331 | 1 | 322 | 1.79e-74 | 233 |
MS.gene003286.t1 | AT4G25980 | 40.184 | 326 | 180 | 6 | 11 | 331 | 11 | 326 | 1.97e-73 | 231 |
MS.gene003286.t1 | AT2G39040 | 42.949 | 312 | 167 | 6 | 27 | 331 | 43 | 350 | 2.71e-73 | 231 |
MS.gene003286.t1 | AT5G64110 | 42.727 | 330 | 168 | 7 | 14 | 331 | 10 | 330 | 4.06e-73 | 230 |
MS.gene003286.t1 | AT5G67400 | 39.458 | 332 | 189 | 5 | 9 | 331 | 1 | 329 | 1.08e-70 | 224 |
MS.gene003286.t1 | AT3G49960 | 39.634 | 328 | 186 | 7 | 9 | 331 | 9 | 329 | 1.20e-68 | 218 |
MS.gene003286.t1 | AT5G64100 | 40.199 | 301 | 167 | 6 | 34 | 331 | 41 | 331 | 1.72e-68 | 218 |
MS.gene003286.t1 | AT4G37520 | 41.234 | 308 | 174 | 5 | 28 | 331 | 25 | 329 | 1.91e-68 | 218 |
MS.gene003286.t1 | AT4G33420 | 37.771 | 323 | 187 | 6 | 9 | 331 | 17 | 325 | 4.99e-68 | 217 |
MS.gene003286.t1 | AT4G26010 | 40.514 | 311 | 163 | 7 | 25 | 331 | 17 | 309 | 7.68e-68 | 216 |
MS.gene003286.t1 | AT4G33870 | 35.417 | 336 | 179 | 4 | 28 | 328 | 66 | 398 | 7.73e-68 | 219 |
MS.gene003286.t1 | AT4G26010 | 40.514 | 311 | 163 | 7 | 25 | 331 | 45 | 337 | 1.26e-67 | 216 |
MS.gene003286.t1 | AT4G33420 | 37.771 | 323 | 187 | 6 | 9 | 331 | 64 | 372 | 2.47e-67 | 216 |
MS.gene003286.t1 | AT1G77100 | 39.818 | 329 | 183 | 8 | 7 | 331 | 2 | 319 | 2.78e-67 | 214 |
MS.gene003286.t1 | AT4G37520 | 40.909 | 308 | 172 | 6 | 28 | 331 | 25 | 326 | 6.44e-67 | 214 |
MS.gene003286.t1 | AT5G42180 | 38.199 | 322 | 179 | 8 | 15 | 330 | 9 | 316 | 1.02e-66 | 213 |
MS.gene003286.t1 | AT2G24800 | 39.935 | 308 | 174 | 5 | 28 | 331 | 29 | 329 | 3.88e-66 | 212 |
MS.gene003286.t1 | AT4G31760 | 37.425 | 334 | 198 | 5 | 1 | 331 | 1 | 326 | 7.73e-66 | 211 |
MS.gene003286.t1 | AT4G37530 | 44.922 | 256 | 136 | 4 | 26 | 277 | 23 | 277 | 4.37e-65 | 208 |
MS.gene003286.t1 | AT3G28200 | 38.710 | 310 | 178 | 6 | 25 | 331 | 16 | 316 | 1.43e-64 | 207 |
MS.gene003286.t1 | AT5G40150 | 38.658 | 313 | 181 | 5 | 22 | 331 | 24 | 328 | 3.30e-64 | 207 |
MS.gene003286.t1 | AT5G24070 | 37.864 | 309 | 177 | 7 | 34 | 335 | 39 | 339 | 5.08e-62 | 202 |
MS.gene003286.t1 | AT4G17690 | 38.462 | 312 | 167 | 8 | 30 | 331 | 26 | 322 | 7.52e-62 | 201 |
MS.gene003286.t1 | AT1G24110 | 35.671 | 328 | 202 | 6 | 11 | 335 | 5 | 326 | 5.07e-61 | 199 |
MS.gene003286.t1 | AT5G47000 | 35.542 | 332 | 198 | 7 | 5 | 331 | 10 | 330 | 4.09e-60 | 197 |
MS.gene003286.t1 | AT2G35380 | 45.749 | 247 | 130 | 3 | 89 | 331 | 1 | 247 | 6.64e-60 | 193 |
MS.gene003286.t1 | AT2G43480 | 35.277 | 343 | 196 | 9 | 7 | 331 | 1 | 335 | 8.07e-60 | 196 |
MS.gene003286.t1 | AT5G22410 | 36.066 | 305 | 181 | 8 | 28 | 327 | 26 | 321 | 2.85e-59 | 194 |
MS.gene003286.t1 | AT1G30870 | 36.859 | 312 | 180 | 7 | 30 | 334 | 47 | 348 | 2.87e-59 | 195 |
MS.gene003286.t1 | AT2G34060 | 37.338 | 308 | 184 | 6 | 27 | 328 | 39 | 343 | 7.00e-59 | 194 |
MS.gene003286.t1 | AT1G34510 | 36.721 | 305 | 177 | 6 | 28 | 331 | 20 | 309 | 1.81e-57 | 189 |
MS.gene003286.t1 | AT3G17070 | 37.237 | 333 | 191 | 7 | 7 | 331 | 17 | 339 | 1.09e-55 | 185 |
MS.gene003286.t1 | AT4G21960 | 36.601 | 306 | 177 | 5 | 34 | 333 | 35 | 329 | 2.75e-55 | 184 |
MS.gene003286.t1 | AT2G37130 | 35.897 | 312 | 182 | 6 | 27 | 331 | 27 | 327 | 1.43e-53 | 179 |
MS.gene003286.t1 | AT2G37130 | 36.066 | 305 | 177 | 6 | 34 | 331 | 3 | 296 | 3.78e-52 | 175 |
MS.gene003286.t1 | AT4G25980 | 44.385 | 187 | 96 | 4 | 11 | 197 | 56 | 234 | 9.13e-46 | 158 |
MS.gene003286.t1 | AT5G39580 | 40.586 | 239 | 114 | 7 | 4 | 232 | 6 | 226 | 1.40e-43 | 150 |
MS.gene003286.t1 | AT3G17070 | 35.816 | 282 | 164 | 7 | 58 | 331 | 4 | 276 | 7.14e-39 | 139 |
MS.gene003286.t1 | AT2G24800 | 39.881 | 168 | 97 | 1 | 28 | 195 | 29 | 192 | 1.78e-34 | 127 |
Find 69 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACAATGTAACTTTGTTAA+TGG | 0.179025 | 2.4:-59692537 | MS.gene003286:CDS |
ACAGATCTAGTTGCACTTTC+AGG | 0.203942 | 2.4:-59693113 | MS.gene003286:intron |
AACTTTGTTAATGGAAATTC+TGG | 0.240702 | 2.4:-59692528 | MS.gene003286:CDS |
ACGAGTGAGCAAACAGCTTT+TGG | 0.284734 | 2.4:-59694438 | MS.gene003286:CDS |
TGCTGAAATTTCCTCTGTTC+TGG | 0.292342 | 2.4:-59694310 | MS.gene003286:intron |
TTATACAATTTCAGCAATAC+TGG | 0.314890 | 2.4:-59692879 | MS.gene003286:CDS |
ACTTGATAATTCCTTCTATA+GGG | 0.325295 | 2.4:-59694863 | MS.gene003286:CDS |
AGTAAAATTAAAGTGTTAAC+TGG | 0.326483 | 2.4:-59692579 | MS.gene003286:CDS |
AATCCTTAGGTTTGAATAGT+AGG | 0.329533 | 2.4:+59692734 | None:intergenic |
AACTTGATAATTCCTTCTAT+AGG | 0.337654 | 2.4:-59694864 | MS.gene003286:CDS |
TCAAACCTAAGGATTCAAAA+AGG | 0.355435 | 2.4:-59692726 | MS.gene003286:CDS |
AAGCTTCAAAGAAAAGAGTT+TGG | 0.356755 | 2.4:+59692625 | None:intergenic |
AAACTATCTCTTCTTCCTAA+TGG | 0.358275 | 2.4:+59693233 | None:intergenic |
CCTAATGGCACTTTCCAATC+AGG | 0.380919 | 2.4:+59693248 | None:intergenic |
CGAACAATGGAATGAACATT+AGG | 0.390558 | 2.4:+59694832 | None:intergenic |
TGGTAGCACCCTCACTGATT+TGG | 0.390806 | 2.4:-59692787 | MS.gene003286:CDS |
TAGGCCGAGTCGAATGTATC+TGG | 0.391018 | 2.4:+59692753 | None:intergenic |
GGAAATAACAACTCAATAAG+AGG | 0.392602 | 2.4:-59694417 | MS.gene003286:CDS |
CGACTCTCTGATGACTTTAG+TGG | 0.401620 | 2.4:+59692500 | None:intergenic |
TAACAACTCAATAAGAGGTT+TGG | 0.401893 | 2.4:-59694412 | MS.gene003286:CDS |
TGCTGTGTAGTGGTTGTGCT+TGG | 0.416566 | 2.4:-59694913 | MS.gene003286:CDS |
TGCAGGCTCATGGTCCTGAT+TGG | 0.421033 | 2.4:-59693262 | MS.gene003286:intron |
CACTTGTGGAAGCCAATACT+TGG | 0.434292 | 2.4:+59692688 | None:intergenic |
AAACTTTGATAGACAAGGTC+TGG | 0.436585 | 2.4:-59693141 | MS.gene003286:CDS |
TGTTCTCAATGTTTGTAAGT+AGG | 0.437059 | 2.4:+59692830 | None:intergenic |
AGGACAGGTGTCCCTATAGA+AGG | 0.439641 | 2.4:+59694852 | None:intergenic |
CCTGATTGGAAAGTGCCATT+AGG | 0.443282 | 2.4:-59693248 | MS.gene003286:CDS |
TTACTTGAACAAAGCAATCA+TGG | 0.449029 | 2.4:+59694743 | None:intergenic |
CCATTGTTCGTGAAGTACTA+AGG | 0.455847 | 2.4:-59694819 | MS.gene003286:CDS |
CTAAGGTTGAAAGCGGGACT+AGG | 0.465831 | 2.4:+59693176 | None:intergenic |
TGTGTAGTGGTTGTGCTTGG+AGG | 0.472368 | 2.4:-59694910 | MS.gene003286:CDS |
TCAGCACAAGAAACAGTGTT+AGG | 0.474603 | 2.4:+59694348 | None:intergenic |
GTTTGAGAGTGACCAAGTAT+TGG | 0.489173 | 2.4:-59692700 | MS.gene003286:CDS |
GGTTGTGTTGAGAGTTGGAT+CGG | 0.510394 | 2.4:+59692851 | None:intergenic |
GTGTAGTGGTTGTGCTTGGA+GGG | 0.511558 | 2.4:-59694909 | MS.gene003286:CDS |
AATCGTGTCCGCGCCACTTG+TGG | 0.515958 | 2.4:+59692674 | None:intergenic |
GTTGTGTTGAGAGTTGGATC+GGG | 0.519078 | 2.4:+59692852 | None:intergenic |
CTCTTCTTTCAATCTCACAT+TGG | 0.521480 | 2.4:-59694944 | MS.gene003286:CDS |
GTGCTACCAGGTCCACCATT+GGG | 0.521697 | 2.4:+59692801 | None:intergenic |
AAGTAGGTTGTGTTGAGAGT+TGG | 0.531334 | 2.4:+59692846 | None:intergenic |
CCTTAGTACTTCACGAACAA+TGG | 0.533136 | 2.4:+59694819 | None:intergenic |
CGGCCTACTATTCAAACCTA+AGG | 0.534403 | 2.4:-59692737 | MS.gene003286:CDS |
ATATGTCCCAATGGTGGACC+TGG | 0.538663 | 2.4:-59692807 | MS.gene003286:CDS |
AAGTTGTGCATTTGAAGAGA+AGG | 0.538902 | 2.4:+59694882 | None:intergenic |
TCGAATGTATCTGGAGTGGT+TGG | 0.542044 | 2.4:+59692762 | None:intergenic |
TAACATAATTTGCAGGCTCA+TGG | 0.549890 | 2.4:-59693272 | MS.gene003286:intron |
GGCAGCTTTGTGCTGTGTAG+TGG | 0.549901 | 2.4:-59694923 | MS.gene003286:CDS |
CACTCCAGATACATTCGACT+CGG | 0.554414 | 2.4:-59692757 | MS.gene003286:CDS |
CAAGTATTGGCTTCCACAAG+TGG | 0.557094 | 2.4:-59692687 | MS.gene003286:CDS |
GGTGCTCATACAATTGGTAG+AGG | 0.557485 | 2.4:-59692927 | MS.gene003286:CDS |
GGTGCTACCAGGTCCACCAT+TGG | 0.558869 | 2.4:+59692800 | None:intergenic |
ATCAGAGAGTCGTCAGAGGA+TGG | 0.568887 | 2.4:-59692489 | MS.gene003286:CDS |
AAATCAGTGAGGGTGCTACC+AGG | 0.569044 | 2.4:+59692789 | None:intergenic |
AGTTGTGCATTTGAAGAGAA+GGG | 0.569161 | 2.4:+59694883 | None:intergenic |
AAAGTGTTAACTGGATCTCA+AGG | 0.570509 | 2.4:-59692570 | MS.gene003286:CDS |
CTCACTCGTAATCGTCGAAG+TGG | 0.599207 | 2.4:+59694452 | None:intergenic |
AATGGAATGAACATTAGGAC+AGG | 0.605201 | 2.4:+59694837 | None:intergenic |
CAGTTCACTAAGGTTGAAAG+CGG | 0.609485 | 2.4:+59693169 | None:intergenic |
TTGAGAACAATATGTCCCAA+TGG | 0.615307 | 2.4:-59692816 | MS.gene003286:CDS |
GTTGTTGAAACTATTGACAA+TGG | 0.615780 | 2.4:+59692650 | None:intergenic |
AGTTCACTAAGGTTGAAAGC+GGG | 0.618851 | 2.4:+59693170 | None:intergenic |
AGAACAATATGTCCCAATGG+TGG | 0.636134 | 2.4:-59692813 | MS.gene003286:CDS |
GGTTGGATCCAAATCAGTGA+GGG | 0.645444 | 2.4:+59692779 | None:intergenic |
AGTCATCAGAGAGTCGTCAG+AGG | 0.647804 | 2.4:-59692493 | MS.gene003286:CDS |
ATTGGCTTCCACAAGTGGCG+CGG | 0.651259 | 2.4:-59692682 | MS.gene003286:CDS |
CGAGTCGAATGTATCTGGAG+TGG | 0.659011 | 2.4:+59692758 | None:intergenic |
AATGGAACATACCAGAACAG+AGG | 0.692344 | 2.4:+59694299 | None:intergenic |
ATCAAACTAGCAAGTATACG+AGG | 0.711443 | 2.4:+59694778 | None:intergenic |
TGGTTGGATCCAAATCAGTG+AGG | 0.728918 | 2.4:+59692778 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAAAAATAGTACATAT+TGG | + | chr2.4:59692831-59692850 | None:intergenic | 10.0% |
!! | TAATATAATTTCTCTAATTT+AGG | + | chr2.4:59694345-59694364 | None:intergenic | 10.0% |
!!! | TACTATTTTTTTTTAAAACT+CGG | - | chr2.4:59692836-59692855 | MS.gene003286:CDS | 10.0% |
!!! | TTCATCATTTTTAATTAATT+AGG | - | chr2.4:59692705-59692724 | MS.gene003286:CDS | 10.0% |
!! | ATAAGCAATAAATAATTAGA+GGG | - | chr2.4:59693939-59693958 | MS.gene003286:intron | 15.0% |
!! | ATAGTTTACATTTGTAAAAA+AGG | + | chr2.4:59694026-59694045 | None:intergenic | 15.0% |
!! | TATAAGCAATAAATAATTAG+AGG | - | chr2.4:59693938-59693957 | MS.gene003286:intron | 15.0% |
!! | TTATATCTATGTTTATGAAA+GGG | - | chr2.4:59692918-59692937 | MS.gene003286:CDS | 15.0% |
!! | TTTATATCTATGTTTATGAA+AGG | - | chr2.4:59692917-59692936 | MS.gene003286:CDS | 15.0% |
!! | TTTATTTGCATTTATGATAA+GGG | + | chr2.4:59693901-59693920 | None:intergenic | 15.0% |
!!! | ATATGTTTTGGTAAATTTTT+AGG | - | chr2.4:59694471-59694490 | MS.gene003286:CDS | 15.0% |
!!! | TTTTATTTGCATTTATGATA+AGG | + | chr2.4:59693902-59693921 | None:intergenic | 15.0% |
!! | AAAAAAAACTTTGATAGACA+AGG | - | chr2.4:59694273-59694292 | MS.gene003286:intron | 20.0% |
!! | AAACAATGTAACTTTGTTAA+TGG | - | chr2.4:59694882-59694901 | MS.gene003286:CDS | 20.0% |
!! | GCTAAATAAGAGTAAAAAAA+AGG | + | chr2.4:59694060-59694079 | None:intergenic | 20.0% |
!! | GTATTTATTAAAGACAAAGT+TGG | + | chr2.4:59693514-59693533 | None:intergenic | 20.0% |
!! | TTCAAATCTCATTTGTAAAA+TGG | + | chr2.4:59694393-59694412 | None:intergenic | 20.0% |
!!! | AGTAAAATTAAAGTGTTAAC+TGG | - | chr2.4:59694840-59694859 | MS.gene003286:CDS | 20.0% |
!!! | CAAATACCAAAAATGTTTTT+CGG | + | chr2.4:59692885-59692904 | None:intergenic | 20.0% |
!!! | TCTAAATCATGTTTAGTTTT+TGG | - | chr2.4:59692735-59692754 | MS.gene003286:CDS | 20.0% |
!!! | TTTACTCATTTTAATCATTG+AGG | + | chr2.4:59694826-59694845 | None:intergenic | 20.0% |
!!! | TTTTACCAAAAACTACAATT+TGG | + | chr2.4:59692766-59692785 | None:intergenic | 20.0% |
! | AAACAAATCAATGCATACTA+AGG | + | chr2.4:59693760-59693779 | None:intergenic | 25.0% |
! | AACTTTGTTAATGGAAATTC+TGG | - | chr2.4:59694891-59694910 | MS.gene003286:CDS | 25.0% |
! | ATGAAAGTGACATAAGAAAA+GGG | - | chr2.4:59693247-59693266 | MS.gene003286:CDS | 25.0% |
! | GTAAACTAGAACTAGAAAAA+TGG | + | chr2.4:59693147-59693166 | None:intergenic | 25.0% |
! | TAGAACTAGAAAAATGGAAA+TGG | + | chr2.4:59693141-59693160 | None:intergenic | 25.0% |
! | TTATACAATTTCAGCAATAC+TGG | - | chr2.4:59694540-59694559 | MS.gene003286:intron | 25.0% |
!! | AACTTGATAATTCCTTCTAT+AGG | - | chr2.4:59692555-59692574 | MS.gene003286:CDS | 25.0% |
!! | ACTTGATAATTCCTTCTATA+GGG | - | chr2.4:59692556-59692575 | MS.gene003286:CDS | 25.0% |
!! | ATTCTAGTAACATAATTTGC+AGG | - | chr2.4:59694140-59694159 | MS.gene003286:intron | 25.0% |
!! | ATTGCTGCAAATTTATTTCT+AGG | - | chr2.4:59693791-59693810 | MS.gene003286:intron | 25.0% |
!! | GCATCTAATTGTATATGTTT+TGG | - | chr2.4:59694459-59694478 | MS.gene003286:CDS | 25.0% |
!! | TAACTCCAAATTGTAGTTTT+TGG | - | chr2.4:59692758-59692777 | MS.gene003286:CDS | 25.0% |
!!! | AGTTTTTTTTCAGTTCACTA+AGG | + | chr2.4:59694263-59694282 | None:intergenic | 25.0% |
!!! | GGGAAAAAAAAGTATTAAAG+TGG | - | chr2.4:59693267-59693286 | MS.gene003286:intron | 25.0% |
!!! | TCTTTTCTTTGAAGCTTTTA+AGG | - | chr2.4:59694800-59694819 | MS.gene003286:CDS | 25.0% |
AAACTATCTCTTCTTCCTAA+TGG | + | chr2.4:59694189-59694208 | None:intergenic | 30.0% | |
AAGCTTCAAAGAAAAGAGTT+TGG | + | chr2.4:59694797-59694816 | None:intergenic | 30.0% | |
AATCCTTAGGTTTGAATAGT+AGG | + | chr2.4:59694688-59694707 | None:intergenic | 30.0% | |
CATGAAAGTGACATAAGAAA+AGG | - | chr2.4:59693246-59693265 | MS.gene003286:CDS | 30.0% | |
GGAAATAACAACTCAATAAG+AGG | - | chr2.4:59693002-59693021 | MS.gene003286:intron | 30.0% | |
GTCTTTCTCTCGTAAAATAT+AGG | - | chr2.4:59693599-59693618 | MS.gene003286:intron | 30.0% | |
GTTGTTGAAACTATTGACAA+TGG | + | chr2.4:59694772-59694791 | None:intergenic | 30.0% | |
TAACAACTCAATAAGAGGTT+TGG | - | chr2.4:59693007-59693026 | MS.gene003286:intron | 30.0% | |
TCAAACCTAAGGATTCAAAA+AGG | - | chr2.4:59694693-59694712 | MS.gene003286:intron | 30.0% | |
TGTTCTCAATGTTTGTAAGT+AGG | + | chr2.4:59694592-59694611 | None:intergenic | 30.0% | |
TTACTTGAACAAAGCAATCA+TGG | + | chr2.4:59692679-59692698 | None:intergenic | 30.0% | |
! | ACTGATCCGAAAAACATTTT+TGG | - | chr2.4:59692876-59692895 | MS.gene003286:CDS | 30.0% |
! | AGGAAGATTTTCATTAGCAA+GGG | + | chr2.4:59694226-59694245 | None:intergenic | 30.0% |
! | ATAAACTAACGAGACGTTTT+AGG | - | chr2.4:59693422-59693441 | MS.gene003286:intron | 30.0% |
! | CTACAAATAATTTTCCGTGA+GGG | + | chr2.4:59693328-59693347 | None:intergenic | 30.0% |
! | TAGGAAGATTTTCATTAGCA+AGG | + | chr2.4:59694227-59694246 | None:intergenic | 30.0% |
! | TCTACAAATAATTTTCCGTG+AGG | + | chr2.4:59693329-59693348 | None:intergenic | 30.0% |
!! | AAAATGTTTTTCGGATCAGT+CGG | + | chr2.4:59692876-59692895 | None:intergenic | 30.0% |
!!! | TTTTTAGGTGCTCATACAAT+TGG | - | chr2.4:59694486-59694505 | MS.gene003286:intron | 30.0% |
AAACTTTGATAGACAAGGTC+TGG | - | chr2.4:59694278-59694297 | MS.gene003286:intron | 35.0% | |
AAGTTGTGCATTTGAAGAGA+AGG | + | chr2.4:59692540-59692559 | None:intergenic | 35.0% | |
AATGGAATGAACATTAGGAC+AGG | + | chr2.4:59692585-59692604 | None:intergenic | 35.0% | |
ACACATATACGTACATCATG+AGG | + | chr2.4:59694439-59694458 | None:intergenic | 35.0% | |
AGTTGTGCATTTGAAGAGAA+GGG | + | chr2.4:59692539-59692558 | None:intergenic | 35.0% | |
ATCAAACTAGCAAGTATACG+AGG | + | chr2.4:59692644-59692663 | None:intergenic | 35.0% | |
ATTTGAACTCCGTTCGTTAA+GGG | - | chr2.4:59694406-59694425 | MS.gene003286:CDS | 35.0% | |
CGAACAATGGAATGAACATT+AGG | + | chr2.4:59692590-59692609 | None:intergenic | 35.0% | |
CTCTTCTTTCAATCTCACAT+TGG | - | chr2.4:59692475-59692494 | MS.gene003286:CDS | 35.0% | |
TAAAACTCGGTATCTGATCA+AGG | - | chr2.4:59692849-59692868 | MS.gene003286:CDS | 35.0% | |
TTGAGAACAATATGTCCCAA+TGG | - | chr2.4:59694603-59694622 | MS.gene003286:intron | 35.0% | |
! | AAAGTGTTAACTGGATCTCA+AGG | - | chr2.4:59694849-59694868 | MS.gene003286:CDS | 35.0% |
! | ACAAGCCTTTTTGAATCCTT+AGG | + | chr2.4:59694701-59694720 | None:intergenic | 35.0% |
! | ATTTGTCGTATTTTCCCTCA+CGG | - | chr2.4:59693311-59693330 | MS.gene003286:intron | 35.0% |
! | CGTCTCGTTAGTTTATTCTT+AGG | + | chr2.4:59693418-59693437 | None:intergenic | 35.0% |
! | TAACATAATTTGCAGGCTCA+TGG | - | chr2.4:59694147-59694166 | MS.gene003286:intron | 35.0% |
AAGTAGGTTGTGTTGAGAGT+TGG | + | chr2.4:59694576-59694595 | None:intergenic | 40.0% | |
AATGGAACATACCAGAACAG+AGG | + | chr2.4:59693123-59693142 | None:intergenic | 40.0% | |
ACAGATCTAGTTGCACTTTC+AGG | - | chr2.4:59694306-59694325 | MS.gene003286:intron | 40.0% | |
AGAACAATATGTCCCAATGG+TGG | - | chr2.4:59694606-59694625 | MS.gene003286:intron | 40.0% | |
AGTTCACTAAGGTTGAAAGC+GGG | + | chr2.4:59694252-59694271 | None:intergenic | 40.0% | |
CAGTTCACTAAGGTTGAAAG+CGG | + | chr2.4:59694253-59694272 | None:intergenic | 40.0% | |
CCTTAGTACTTCACGAACAA+TGG | + | chr2.4:59692603-59692622 | None:intergenic | 40.0% | |
GACACTCATTGTGAAACAGA+GGG | - | chr2.4:59693694-59693713 | MS.gene003286:intron | 40.0% | |
GATTTGAACTCCGTTCGTTA+AGG | - | chr2.4:59694405-59694424 | MS.gene003286:CDS | 40.0% | |
GGTATATCACCCTTAACGAA+CGG | + | chr2.4:59694418-59694437 | None:intergenic | 40.0% | |
GTTTGAGAGTGACCAAGTAT+TGG | - | chr2.4:59694719-59694738 | MS.gene003286:intron | 40.0% | |
TCAGCACAAGAAACAGTGTT+AGG | + | chr2.4:59693074-59693093 | None:intergenic | 40.0% | |
TGCTGAAATTTCCTCTGTTC+TGG | - | chr2.4:59693109-59693128 | MS.gene003286:intron | 40.0% | |
! | CCATTGTTCGTGAAGTACTA+AGG | - | chr2.4:59692600-59692619 | MS.gene003286:CDS | 40.0% |
CACTCCAGATACATTCGACT+CGG | - | chr2.4:59694662-59694681 | MS.gene003286:intron | 45.0% | |
CACTTGTGGAAGCCAATACT+TGG | + | chr2.4:59694734-59694753 | None:intergenic | 45.0% | |
CCTAATGGCACTTTCCAATC+AGG | + | chr2.4:59694174-59694193 | None:intergenic | 45.0% | |
CGACACTCATTGTGAAACAG+AGG | - | chr2.4:59693693-59693712 | MS.gene003286:intron | 45.0% | |
CGACTCTCTGATGACTTTAG+TGG | + | chr2.4:59694922-59694941 | None:intergenic | 45.0% | |
CGGCCTACTATTCAAACCTA+AGG | - | chr2.4:59694682-59694701 | MS.gene003286:intron | 45.0% | |
GGTGCTCATACAATTGGTAG+AGG | - | chr2.4:59694492-59694511 | MS.gene003286:intron | 45.0% | |
GGTTGGATCCAAATCAGTGA+GGG | + | chr2.4:59694643-59694662 | None:intergenic | 45.0% | |
GGTTGTGTTGAGAGTTGGAT+CGG | + | chr2.4:59694571-59694590 | None:intergenic | 45.0% | |
GTTGTGTTGAGAGTTGGATC+GGG | + | chr2.4:59694570-59694589 | None:intergenic | 45.0% | |
TGGTTGGATCCAAATCAGTG+AGG | + | chr2.4:59694644-59694663 | None:intergenic | 45.0% | |
! | ACGAGTGAGCAAACAGCTTT+TGG | - | chr2.4:59692981-59693000 | MS.gene003286:intron | 45.0% |
! | TCGAATGTATCTGGAGTGGT+TGG | + | chr2.4:59694660-59694679 | None:intergenic | 45.0% |
!! | CAAGTATTGGCTTCCACAAG+TGG | - | chr2.4:59694732-59694751 | MS.gene003286:intron | 45.0% |
!! | CCTGATTGGAAAGTGCCATT+AGG | - | chr2.4:59694171-59694190 | MS.gene003286:intron | 45.0% |
AGGACAGGTGTCCCTATAGA+AGG | + | chr2.4:59692570-59692589 | None:intergenic | 50.0% | |
AGTCATCAGAGAGTCGTCAG+AGG | - | chr2.4:59694926-59694945 | MS.gene003286:CDS | 50.0% | |
ATCAGAGAGTCGTCAGAGGA+TGG | - | chr2.4:59694930-59694949 | MS.gene003286:CDS | 50.0% | |
CGAGTCGAATGTATCTGGAG+TGG | + | chr2.4:59694664-59694683 | None:intergenic | 50.0% | |
CTAAGGTTGAAAGCGGGACT+AGG | + | chr2.4:59694246-59694265 | None:intergenic | 50.0% | |
CTCACTCGTAATCGTCGAAG+TGG | + | chr2.4:59692970-59692989 | None:intergenic | 50.0% | |
GTGTAGTGGTTGTGCTTGGA+GGG | - | chr2.4:59692510-59692529 | MS.gene003286:CDS | 50.0% | |
TAGGCCGAGTCGAATGTATC+TGG | + | chr2.4:59694669-59694688 | None:intergenic | 50.0% | |
TGCTGTGTAGTGGTTGTGCT+TGG | - | chr2.4:59692506-59692525 | MS.gene003286:CDS | 50.0% | |
TGTGTAGTGGTTGTGCTTGG+AGG | - | chr2.4:59692509-59692528 | MS.gene003286:CDS | 50.0% | |
! | TGGTAGCACCCTCACTGATT+TGG | - | chr2.4:59694632-59694651 | MS.gene003286:intron | 50.0% |
!! | AAATCAGTGAGGGTGCTACC+AGG | + | chr2.4:59694633-59694652 | None:intergenic | 50.0% |
!! | ATATGTCCCAATGGTGGACC+TGG | - | chr2.4:59694612-59694631 | MS.gene003286:intron | 50.0% |
GTGCTACCAGGTCCACCATT+GGG | + | chr2.4:59694621-59694640 | None:intergenic | 55.0% | |
TGCAGGCTCATGGTCCTGAT+TGG | - | chr2.4:59694157-59694176 | MS.gene003286:intron | 55.0% | |
! | ATTGGCTTCCACAAGTGGCG+CGG | - | chr2.4:59694737-59694756 | MS.gene003286:intron | 55.0% |
! | GGCAGCTTTGTGCTGTGTAG+TGG | - | chr2.4:59692496-59692515 | MS.gene003286:CDS | 55.0% |
AATCGTGTCCGCGCCACTTG+TGG | + | chr2.4:59694748-59694767 | None:intergenic | 60.0% | |
! | GGTGCTACCAGGTCCACCAT+TGG | + | chr2.4:59694622-59694641 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 59692470 | 59694971 | 59692470 | ID=MS.gene003286 |
chr2.4 | mRNA | 59692470 | 59694971 | 59692470 | ID=MS.gene003286.t1;Parent=MS.gene003286 |
chr2.4 | exon | 59694747 | 59694971 | 59694747 | ID=MS.gene003286.t1.exon1;Parent=MS.gene003286.t1 |
chr2.4 | CDS | 59694747 | 59694971 | 59694747 | ID=cds.MS.gene003286.t1;Parent=MS.gene003286.t1 |
chr2.4 | exon | 59694311 | 59694502 | 59694311 | ID=MS.gene003286.t1.exon2;Parent=MS.gene003286.t1 |
chr2.4 | CDS | 59694311 | 59694502 | 59694311 | ID=cds.MS.gene003286.t1;Parent=MS.gene003286.t1 |
chr2.4 | exon | 59693114 | 59693279 | 59693114 | ID=MS.gene003286.t1.exon3;Parent=MS.gene003286.t1 |
chr2.4 | CDS | 59693114 | 59693279 | 59693114 | ID=cds.MS.gene003286.t1;Parent=MS.gene003286.t1 |
chr2.4 | exon | 59692470 | 59692948 | 59692470 | ID=MS.gene003286.t1.exon4;Parent=MS.gene003286.t1 |
chr2.4 | CDS | 59692470 | 59692948 | 59692470 | ID=cds.MS.gene003286.t1;Parent=MS.gene003286.t1 |
Gene Sequence |
Protein sequence |