AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003284

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003284.t1 MTR_2g029820 98.028 355 7 0 1 355 1 355 0.0 717
MS.gene003284.t1 MTR_2g029815 89.296 355 35 1 1 355 1 352 0.0 648
MS.gene003284.t1 MTR_2g029800 83.662 355 56 1 1 355 1 353 0.0 615
MS.gene003284.t1 MTR_2g029830 82.883 333 56 1 22 353 21 353 0.0 569
MS.gene003284.t1 MTR_2g029850 73.803 355 88 3 1 354 1 351 0.0 531
MS.gene003284.t1 MTR_2g028980 71.831 355 100 0 1 355 1 355 0.0 531
MS.gene003284.t1 MTR_2g029740 70.986 355 103 0 1 355 1 355 0.0 521
MS.gene003284.t1 MTR_2g029750 70.141 355 105 1 1 355 1 354 0.0 515
MS.gene003284.t1 MTR_2g029860 71.989 357 94 5 1 355 1 353 0.0 512
MS.gene003284.t1 MTR_2g029910 67.232 354 111 2 3 355 4 353 4.93e-176 493
MS.gene003284.t1 MTR_2g029830 84.342 281 43 1 74 353 5 285 4.97e-175 488
MS.gene003284.t1 MTR_2g029560 65.217 345 113 2 1 345 1 338 1.67e-163 461
MS.gene003284.t1 MTR_2g029730 64.045 356 116 3 1 355 1 345 1.74e-162 458
MS.gene003284.t1 MTR_1g054205 59.164 311 126 1 21 330 16 326 2.20e-133 384
MS.gene003284.t1 MTR_7g093370 60.586 307 120 1 25 330 65 371 2.77e-133 385
MS.gene003284.t1 MTR_5g021060 52.805 303 142 1 29 331 30 331 7.21e-109 322
MS.gene003284.t1 MTR_8g076820 50.495 303 149 1 29 331 30 331 9.57e-107 316
MS.gene003284.t1 MTR_4g125940 51.757 313 147 2 21 331 20 330 1.63e-106 315
MS.gene003284.t1 MTR_5g017860 51.148 305 145 3 27 330 25 326 1.52e-104 310
MS.gene003284.t1 MTR_2g040000 49.837 307 149 2 28 331 28 332 1.98e-104 310
MS.gene003284.t1 MTR_5g017850 49.673 306 148 4 27 330 25 326 8.66e-102 303
MS.gene003284.t1 MTR_1g022970 48.675 302 155 0 29 330 46 347 7.94e-98 294
MS.gene003284.t1 MTR_4g125940 53.986 276 123 2 58 331 2 275 1.34e-96 288
MS.gene003284.t1 MTR_4g029200 48.387 310 151 2 21 330 38 338 2.19e-96 290
MS.gene003284.t1 MTR_3g094650 47.222 324 156 4 5 326 8 318 7.54e-96 288
MS.gene003284.t1 MTR_2g084080 45.538 325 168 2 6 330 2 317 1.23e-95 287
MS.gene003284.t1 MTR_4g029170 48.265 317 153 4 16 330 14 321 7.54e-95 285
MS.gene003284.t1 MTR_3g094670 47.256 328 158 4 1 326 4 318 3.30e-94 284
MS.gene003284.t1 MTR_4g046713 44.892 323 170 4 9 330 11 326 3.88e-94 284
MS.gene003284.t1 MTR_4g083710 47.962 319 156 3 15 330 13 324 7.70e-94 283
MS.gene003284.t1 MTR_3g466200 46.462 325 158 5 9 330 9 320 8.51e-94 283
MS.gene003284.t1 MTR_5g074970 47.112 329 159 5 7 330 8 326 2.57e-93 281
MS.gene003284.t1 MTR_2g088770 45.768 319 167 5 15 331 12 326 2.57e-93 281
MS.gene003284.t1 MTR_2g084000 48.525 305 149 2 26 330 23 319 4.20e-93 281
MS.gene003284.t1 MTR_7g072510 44.444 324 163 3 7 330 6 312 6.87e-93 280
MS.gene003284.t1 MTR_5g083860 45.370 324 165 4 9 330 12 325 2.60e-92 279
MS.gene003284.t1 MTR_2g084020 46.129 310 159 2 21 330 17 318 1.30e-91 277
MS.gene003284.t1 MTR_4g029190 49.351 308 144 5 26 330 42 340 2.27e-91 277
MS.gene003284.t1 MTR_4g029180 48.173 301 145 4 32 330 30 321 2.49e-91 276
MS.gene003284.t1 MTR_3g094630 46.988 332 161 4 1 330 4 322 2.54e-91 276
MS.gene003284.t1 MTR_2g084110 45.806 310 159 2 21 330 17 317 3.45e-91 276
MS.gene003284.t1 MTR_2g084090 47.436 312 152 5 21 330 17 318 5.45e-91 275
MS.gene003284.t1 MTR_3g072190 47.525 303 150 2 28 330 25 318 6.77e-91 275
MS.gene003284.t1 MTR_2g084010 46.580 307 156 2 24 330 20 318 8.41e-91 275
MS.gene003284.t1 MTR_4g122640 43.155 336 175 4 7 330 5 336 5.51e-89 271
MS.gene003284.t1 MTR_7g072480 46.349 315 160 2 16 330 11 316 1.74e-88 269
MS.gene003284.t1 MTR_4g074995 46.082 319 149 4 15 330 10 308 3.14e-88 268
MS.gene003284.t1 MTR_7g107520 44.620 316 169 4 15 330 11 320 8.16e-88 267
MS.gene003284.t1 MTR_5g014100 46.865 303 157 2 32 330 29 331 9.79e-88 268
MS.gene003284.t1 MTR_4g114210 43.925 321 166 6 16 330 8 320 1.60e-87 266
MS.gene003284.t1 MTR_5g049280 43.987 316 166 6 23 331 27 338 3.45e-87 266
MS.gene003284.t1 MTR_3g466180 45.397 315 163 2 16 330 18 323 2.27e-86 264
MS.gene003284.t1 MTR_5g074740 44.615 325 169 4 9 330 5 321 3.08e-86 263
MS.gene003284.t1 MTR_2g029880 61.111 216 70 3 139 354 7 208 4.03e-86 259
MS.gene003284.t1 MTR_5g074760 46.254 307 154 4 27 330 23 321 4.80e-86 263
MS.gene003284.t1 MTR_1g115900 42.368 321 174 4 13 331 11 322 9.31e-86 262
MS.gene003284.t1 MTR_5g074710 45.231 325 167 4 9 330 5 321 1.13e-85 262
MS.gene003284.t1 MTR_5g074860 44.277 332 174 4 1 329 1 324 1.16e-85 262
MS.gene003284.t1 MTR_3g092990 43.260 319 178 2 14 331 11 327 1.09e-84 259
MS.gene003284.t1 MTR_4g031140 41.987 312 176 3 25 336 24 330 3.43e-84 259
MS.gene003284.t1 MTR_2g008710 44.702 302 156 5 33 330 31 325 8.87e-84 257
MS.gene003284.t1 MTR_4g133800 45.302 298 152 6 34 330 46 333 1.44e-83 257
MS.gene003284.t1 MTR_4g030890 43.087 311 172 3 24 334 95 400 2.53e-83 259
MS.gene003284.t1 MTR_6g043240 46.933 326 149 10 29 351 42 346 1.28e-82 255
MS.gene003284.t1 MTR_3g467600 46.278 309 156 3 25 330 23 324 7.45e-82 252
MS.gene003284.t1 MTR_4g074990 42.633 319 154 4 15 330 13 305 5.73e-81 249
MS.gene003284.t1 MTR_5g016010 41.742 333 185 5 1 329 1 328 1.47e-80 249
MS.gene003284.t1 MTR_7g086820 42.157 306 168 5 27 332 18 314 2.44e-80 248
MS.gene003284.t1 MTR_6g043280 43.769 329 159 8 16 332 20 334 8.19e-80 247
MS.gene003284.t1 MTR_7g026990 39.432 317 182 3 15 331 17 323 1.20e-78 244
MS.gene003284.t1 MTR_1g009750 45.277 307 160 5 28 330 26 328 1.33e-78 244
MS.gene003284.t1 MTR_1g101830 42.810 306 169 4 25 330 23 322 1.55e-78 244
MS.gene003284.t1 MTR_5g022870 40.491 326 182 8 6 330 2 316 1.99e-78 243
MS.gene003284.t1 MTR_1g086320 40.303 330 187 4 7 330 8 333 4.43e-78 243
MS.gene003284.t1 MTR_1g086490 40.896 335 185 4 7 330 8 340 4.73e-78 243
MS.gene003284.t1 MTR_4g087965 43.934 305 164 6 28 327 41 343 7.37e-78 243
MS.gene003284.t1 MTR_2g437770 43.522 301 158 6 32 331 53 342 9.94e-78 242
MS.gene003284.t1 MTR_6g043460 43.087 311 164 6 29 337 36 335 1.21e-77 242
MS.gene003284.t1 MTR_4g127670 45.875 303 154 5 28 326 23 319 1.53e-77 241
MS.gene003284.t1 MTR_1g038680 43.377 302 165 4 33 330 33 332 6.13e-77 240
MS.gene003284.t1 MTR_8g075100 41.042 307 173 5 24 330 21 319 2.60e-76 238
MS.gene003284.t1 MTR_4g095450 43.252 326 164 7 6 326 11 320 3.33e-75 235
MS.gene003284.t1 MTR_4g132490 39.688 320 183 5 16 330 13 327 9.72e-75 234
MS.gene003284.t1 MTR_3g072190 46.718 259 129 2 72 330 2 251 2.32e-73 228
MS.gene003284.t1 MTR_6g027440 40.123 324 177 8 11 330 4 314 3.98e-73 229
MS.gene003284.t1 MTR_4g074980 40.506 316 154 5 15 330 13 294 4.66e-73 229
MS.gene003284.t1 MTR_7g029030 40.964 332 182 6 1 330 1 320 1.34e-72 228
MS.gene003284.t1 MTR_1g025980 39.506 324 188 5 6 329 2 317 2.90e-72 228
MS.gene003284.t1 MTR_1g090760 40.549 328 185 6 9 330 7 330 6.52e-72 227
MS.gene003284.t1 MTR_3g092990 40.752 319 175 3 14 331 11 316 6.77e-72 226
MS.gene003284.t1 MTR_7g086870 40.850 306 163 7 29 331 22 312 2.13e-70 223
MS.gene003284.t1 MTR_1g077000 38.323 334 189 7 1 330 7 327 2.49e-70 223
MS.gene003284.t1 MTR_2g099175 38.907 311 172 6 28 330 35 335 5.61e-70 222
MS.gene003284.t1 MTR_0155s0040 37.309 327 186 6 4 330 8 315 1.00e-69 221
MS.gene003284.t1 MTR_4g074980 44.578 249 127 3 15 260 13 253 2.61e-69 218
MS.gene003284.t1 MTR_2g008160 40.514 311 173 6 25 330 20 323 5.85e-69 219
MS.gene003284.t1 MTR_1g009750 42.020 307 153 6 28 330 26 311 2.14e-68 217
MS.gene003284.t1 MTR_8g062780 37.898 314 187 4 25 334 19 328 1.43e-65 211
MS.gene003284.t1 MTR_5g074860 38.855 332 153 4 1 329 1 285 1.68e-65 209
MS.gene003284.t1 MTR_5g033470 38.462 312 179 7 27 330 71 377 1.90e-64 209
MS.gene003284.t1 MTR_0286s0010 39.550 311 177 7 25 330 30 334 4.03e-63 204
MS.gene003284.t1 MTR_6g008075 39.550 311 177 7 25 330 30 334 4.03e-63 204
MS.gene003284.t1 MTR_2g008730 38.199 322 163 6 14 330 11 301 7.86e-63 202
MS.gene003284.t1 MTR_2g067440 35.068 365 189 8 3 331 36 388 1.14e-62 205
MS.gene003284.t1 MTR_3g105790 39.032 310 179 4 24 330 20 322 1.28e-62 203
MS.gene003284.t1 MTR_2g078610 35.227 352 187 8 14 327 55 403 5.56e-62 204
MS.gene003284.t1 MTR_2g077990 35.328 351 186 8 14 326 55 402 1.22e-61 203
MS.gene003284.t1 MTR_1g066710 38.188 309 178 5 27 331 25 324 2.75e-60 197
MS.gene003284.t1 MTR_0147s0010 35.185 324 174 4 26 329 74 381 3.11e-59 196
MS.gene003284.t1 MTR_4g132110 37.013 308 181 5 32 335 35 333 6.85e-58 191
MS.gene003284.t1 MTR_1g066380 37.013 308 183 4 27 331 25 324 9.30e-58 190
MS.gene003284.t1 MTR_1g066640 37.662 308 181 4 27 331 25 324 1.13e-57 190
MS.gene003284.t1 MTR_2g078280 34.897 341 181 8 14 316 55 392 7.01e-57 190
MS.gene003284.t1 MTR_4g132110 36.741 313 180 6 32 335 35 338 1.33e-56 187
MS.gene003284.t1 MTR_2g067450 37.459 307 182 6 27 329 9 309 5.87e-56 185
MS.gene003284.t1 MTR_1g066680 37.097 310 179 6 27 331 25 323 1.53e-55 184
MS.gene003284.t1 MTR_2g008160 35.370 311 154 6 25 330 20 288 6.75e-52 174
MS.gene003284.t1 MTR_1g066380 38.168 262 151 4 73 331 3 256 4.59e-47 160
MS.gene003284.t1 MTR_2g008160 44.382 178 95 3 25 202 20 193 5.26e-45 153
MS.gene003284.t1 MTR_3g072210 45.026 191 96 3 141 330 56 238 3.01e-44 152
MS.gene003284.t1 MTR_3g105790 39.496 238 138 3 96 330 12 246 1.68e-43 151
MS.gene003284.t1 MTR_5g074700 39.655 232 115 5 102 330 5 214 7.93e-43 148
MS.gene003284.t1 MTR_7g072490 36.948 249 94 3 75 323 2 187 1.72e-38 136
MS.gene003284.t1 MTR_3g072260 55.238 105 47 0 28 132 25 129 1.80e-33 121
MS.gene003284.t1 MTR_2g029930 57.522 113 20 3 14 112 4 102 1.34e-32 117
MS.gene003284.t1 MTR_5g058120 42.945 163 80 3 164 326 6 155 3.28e-32 121
MS.gene003284.t1 MTR_2g077980 32.857 280 145 10 91 331 11 286 2.60e-30 117
MS.gene003284.t1 MTR_2g078560 31.579 228 123 5 135 331 96 321 3.81e-28 112
MS.gene003284.t1 MTR_3g462850 40.411 146 76 6 193 331 9 150 6.73e-24 96.3
MS.gene003284.t1 MTR_7g086790 32.292 192 108 4 76 267 17 186 4.89e-22 92.8
MS.gene003284.t1 MTR_1g089005 39.695 131 65 3 9 133 2 124 2.36e-21 89.7
MS.gene003284.t1 MTR_4g012865 45.070 71 39 0 26 96 74 144 7.66e-18 80.1
MS.gene003284.t1 MTR_1g098320 48.193 83 41 1 251 333 47 127 1.18e-17 79.0
MS.gene003284.t1 MTR_4g114220 47.059 85 35 2 49 133 23 97 1.79e-17 78.6
MS.gene003284.t1 MTR_6g048160 54.930 71 28 2 68 138 22 88 2.50e-17 76.6
MS.gene003284.t1 MTR_5g074770 43.678 87 48 1 243 329 23 108 3.42e-16 73.9
MS.gene003284.t1 MTR_7g107500 41.414 99 54 3 232 330 3 97 8.78e-14 67.0
MS.gene003284.t1 MTR_7g086810 31.405 121 57 1 27 147 4 98 1.12e-13 70.1
MS.gene003284.t1 MTR_3g107060 27.372 274 147 10 44 314 91 315 3.72e-13 69.7
MS.gene003284.t1 MTR_4g031040 29.070 172 78 3 91 262 4 131 6.03e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003284.t1 AT5G06730 55.723 332 145 1 14 343 18 349 3.50e-133 384
MS.gene003284.t1 AT5G06720 56.467 317 138 0 14 330 17 333 2.14e-132 381
MS.gene003284.t1 AT2G38380 55.255 333 139 3 24 355 26 349 1.09e-128 372
MS.gene003284.t1 AT2G38390 53.754 333 144 3 24 355 26 349 4.89e-127 368
MS.gene003284.t1 AT3G49120 54.867 339 148 3 14 347 14 352 8.95e-126 365
MS.gene003284.t1 AT3G32980 56.000 325 141 2 25 347 27 351 9.53e-125 363
MS.gene003284.t1 AT3G49110 55.385 325 143 2 25 347 29 353 8.60e-122 355
MS.gene003284.t1 AT4G08770 55.000 320 142 2 25 342 20 339 1.73e-121 354
MS.gene003284.t1 AT4G08780 53.438 320 147 2 25 342 20 339 9.22e-118 345
MS.gene003284.t1 AT5G19880 53.074 309 142 2 25 330 21 329 3.72e-114 335
MS.gene003284.t1 AT2G18140 48.923 325 161 2 6 330 16 335 3.00e-107 318
MS.gene003284.t1 AT2G18150 50.987 304 148 1 27 330 34 336 5.23e-107 317
MS.gene003284.t1 AT4G36430 51.623 308 148 1 24 331 25 331 1.07e-106 316
MS.gene003284.t1 AT5G66390 49.675 308 154 1 23 330 27 333 2.71e-105 313
MS.gene003284.t1 AT5G19890 51.792 307 140 4 27 331 28 328 2.36e-104 310
MS.gene003284.t1 AT3G50990 50.163 307 152 1 24 330 36 341 8.26e-104 309
MS.gene003284.t1 AT1G44970 49.196 311 156 1 20 330 38 346 5.15e-101 302
MS.gene003284.t1 AT1G14550 49.180 305 147 3 27 330 24 321 2.35e-99 297
MS.gene003284.t1 AT5G05340 48.039 306 148 3 27 330 28 324 2.24e-96 289
MS.gene003284.t1 AT1G14540 47.205 322 163 3 9 330 1 315 5.07e-95 286
MS.gene003284.t1 AT4G16270 47.855 303 153 4 29 330 50 348 2.88e-93 282
MS.gene003284.t1 AT1G49570 45.902 305 160 3 27 328 46 348 4.07e-93 282
MS.gene003284.t1 AT1G68850 46.382 304 157 5 33 331 34 336 6.49e-92 278
MS.gene003284.t1 AT1G05260 42.342 333 183 6 1 331 1 326 1.45e-87 267
MS.gene003284.t1 AT4G11290 42.154 325 183 4 8 330 5 326 4.54e-86 263
MS.gene003284.t1 AT2G41480 44.037 327 169 6 9 330 11 328 5.81e-86 263
MS.gene003284.t1 AT1G71695 46.429 308 153 6 29 333 44 342 6.66e-86 264
MS.gene003284.t1 AT2G35380 47.351 302 155 3 33 330 34 335 3.84e-84 258
MS.gene003284.t1 AT5G58400 44.343 327 167 5 3 326 7 321 4.26e-84 258
MS.gene003284.t1 AT5G58390 45.570 316 160 5 14 326 6 312 4.60e-84 258
MS.gene003284.t1 AT3G03670 43.092 304 170 2 27 330 21 321 8.85e-84 257
MS.gene003284.t1 AT3G21770 42.342 333 186 5 1 331 1 329 2.22e-83 256
MS.gene003284.t1 AT2G18980 45.963 322 161 6 15 330 9 323 3.20e-83 256
MS.gene003284.t1 AT2G22420 40.588 340 191 4 1 340 1 329 6.35e-83 255
MS.gene003284.t1 AT5G14130 43.711 318 170 5 18 330 17 330 2.73e-82 254
MS.gene003284.t1 AT3G01190 42.105 323 178 7 9 330 7 321 3.12e-82 253
MS.gene003284.t1 AT5G15180 42.581 310 167 6 25 330 27 329 4.41e-82 253
MS.gene003284.t1 AT4G30170 45.307 309 158 5 26 330 24 325 5.57e-82 253
MS.gene003284.t1 AT5G14130 43.711 318 170 5 18 330 58 371 8.21e-82 254
MS.gene003284.t1 AT5G64120 41.390 331 176 6 10 330 6 328 1.47e-81 251
MS.gene003284.t1 AT1G05240 44.156 308 158 5 29 330 26 325 2.51e-81 251
MS.gene003284.t1 AT1G05250 44.156 308 158 5 29 330 26 325 2.51e-81 251
MS.gene003284.t1 AT5G51890 43.648 307 166 5 25 330 22 322 1.06e-80 249
MS.gene003284.t1 AT4G37530 43.689 309 169 3 25 330 23 329 5.80e-80 248
MS.gene003284.t1 AT5G67400 42.025 326 182 4 9 330 7 329 2.29e-79 246
MS.gene003284.t1 AT5G17820 41.447 304 166 5 27 330 22 313 3.22e-79 245
MS.gene003284.t1 AT5G17820 41.447 304 166 5 27 330 75 366 4.90e-78 244
MS.gene003284.t1 AT3G49960 42.331 326 178 5 9 330 10 329 1.54e-77 241
MS.gene003284.t1 AT5G39580 41.265 332 177 8 1 330 4 319 1.15e-76 239
MS.gene003284.t1 AT4G25980 40.979 327 178 6 9 330 10 326 2.00e-76 238
MS.gene003284.t1 AT4G37520 41.042 307 176 3 27 330 25 329 1.63e-74 234
MS.gene003284.t1 AT5G64110 44.371 302 155 7 33 330 38 330 5.05e-74 232
MS.gene003284.t1 AT4G37520 40.717 307 174 4 27 330 25 326 6.80e-73 229
MS.gene003284.t1 AT4G33420 38.838 327 186 7 4 330 13 325 1.36e-72 229
MS.gene003284.t1 AT5G64100 42.193 301 161 7 33 330 41 331 1.61e-72 229
MS.gene003284.t1 AT4G33420 38.838 327 186 7 4 330 60 372 5.67e-72 228
MS.gene003284.t1 AT2G39040 42.122 311 169 7 27 330 44 350 3.80e-71 226
MS.gene003284.t1 AT5G42180 39.938 323 184 7 8 329 3 316 4.06e-71 224
MS.gene003284.t1 AT2G24800 40.909 308 171 5 27 330 29 329 3.71e-69 220
MS.gene003284.t1 AT2G34060 40.260 308 175 6 26 327 39 343 6.67e-69 220
MS.gene003284.t1 AT4G37530 45.136 257 138 2 25 278 23 279 1.21e-68 217
MS.gene003284.t1 AT4G31760 38.710 310 182 3 23 330 23 326 3.33e-68 217
MS.gene003284.t1 AT5G24070 38.166 338 188 8 4 331 10 336 1.33e-67 216
MS.gene003284.t1 AT4G33870 35.629 334 169 6 33 327 72 398 1.35e-67 218
MS.gene003284.t1 AT1G77100 39.939 328 183 7 7 330 2 319 1.47e-66 213
MS.gene003284.t1 AT2G43480 37.681 345 183 10 7 330 2 335 3.55e-66 212
MS.gene003284.t1 AT4G17690 39.344 305 174 5 29 330 26 322 4.04e-66 212
MS.gene003284.t1 AT5G40150 39.423 312 180 4 21 330 24 328 1.54e-65 211
MS.gene003284.t1 AT5G47000 37.730 326 192 6 9 331 14 331 1.62e-65 211
MS.gene003284.t1 AT1G24110 38.037 326 193 6 8 330 3 322 3.12e-65 209
MS.gene003284.t1 AT4G26010 40.193 311 164 8 24 330 17 309 5.33e-65 209
MS.gene003284.t1 AT4G26010 40.193 311 164 8 24 330 45 337 7.26e-65 209
MS.gene003284.t1 AT3G28200 37.540 309 183 4 24 330 16 316 6.66e-63 203
MS.gene003284.t1 AT1G30870 38.816 304 173 6 33 333 55 348 6.75e-63 204
MS.gene003284.t1 AT5G22410 37.013 308 174 8 27 326 26 321 1.46e-61 200
MS.gene003284.t1 AT1G34510 39.414 307 168 8 27 331 20 310 1.27e-60 197
MS.gene003284.t1 AT2G35380 45.714 245 129 3 90 330 3 247 2.11e-60 194
MS.gene003284.t1 AT4G21960 38.235 306 172 6 32 331 34 328 5.59e-60 196
MS.gene003284.t1 AT3G17070 38.390 323 181 9 17 330 26 339 1.52e-57 190
MS.gene003284.t1 AT2G37130 36.893 309 183 5 26 330 27 327 4.55e-57 189
MS.gene003284.t1 AT2G37130 36.964 303 179 5 32 330 2 296 1.01e-55 184
MS.gene003284.t1 AT4G25980 40.773 233 125 5 9 236 55 279 5.77e-49 166
MS.gene003284.t1 AT3G17070 37.546 269 149 10 71 330 18 276 6.47e-41 145
MS.gene003284.t1 AT5G39580 42.157 204 104 5 1 203 4 194 1.08e-40 143
MS.gene003284.t1 AT2G24800 42.442 172 95 1 27 198 29 196 1.06e-37 135
MS.gene003284.t1 AT1G77490 28.517 263 150 9 63 314 106 341 1.50e-16 80.9
MS.gene003284.t1 AT1G77490 28.517 263 150 9 63 314 106 341 1.92e-16 80.5
MS.gene003284.t1 AT3G09640 25.352 213 117 5 103 313 74 246 2.96e-13 69.3
MS.gene003284.t1 AT3G09640 25.352 213 117 5 103 313 74 246 2.96e-13 69.3
MS.gene003284.t1 AT3G42570 31.507 146 87 4 53 196 15 149 6.35e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGGCTGCTATGATCAAAA+TGG 0.259558 2.4:-59714353 MS.gene003284:CDS
TGGACAAGTGTTCCTGTAAA+AGG 0.264524 2.4:+59717180 None:intergenic
GGAAATATTGGTGTGTTAAC+CGG 0.297989 2.4:-59714331 MS.gene003284:CDS
TCTAATCTCTCCTTGGTTCC+CGG 0.308228 2.4:+59714312 None:intergenic
CCTCTTAATGAGTTTCTGTT+TGG 0.310696 2.4:+59716189 None:intergenic
ATTTCAGGTGCTCATACATT+TGG 0.340486 2.4:-59714685 MS.gene003284:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2.4:+59714505 None:intergenic
CAGAAACTCATTAAGAGGTT+TGG 0.342785 2.4:-59716184 MS.gene003284:CDS
CGAACAATGGAACTAACATT+TGG 0.350033 2.4:+59717160 None:intergenic
AGGAGTCGTTGGATCGAAAT+TGG 0.358608 2.4:+59714525 None:intergenic
CCAAACAGAAACTCATTAAG+AGG 0.372095 2.4:-59716189 MS.gene003284:CDS
CCTGACTGGAAGGTTCCTTT+AGG 0.381585 2.4:-59715942 MS.gene003284:CDS
TGCTGTATTGTGGTTGTGCT+TGG 0.382429 2.4:-59717241 MS.gene003284:CDS
CAAGAGTTGTTCTCAACATC+TGG 0.390230 2.4:-59714439 MS.gene003284:CDS
ATGATCAAAATGGGAAATAT+TGG 0.401401 2.4:-59714343 MS.gene003284:CDS
CCATTGTTCGTGAAGTCATA+AGG 0.434806 2.4:-59717147 MS.gene003284:CDS
GAATTTGTTGACAATGCTAA+TGG 0.449121 2.4:+59714408 None:intergenic
GTATGCTTGCTAGTCTTGTC+AGG 0.452656 2.4:-59717102 MS.gene003284:CDS
AAACCATCTCTTCTTCCTAA+AGG 0.452959 2.4:+59715927 None:intergenic
TTGTACAACTTCAGCGGTAC+GGG 0.454738 2.4:-59714631 MS.gene003284:CDS
AATCAAAACAGCTGTGGAAA+AGG 0.458727 2.4:-59716148 MS.gene003284:CDS
TGTATTGTGGTTGTGCTTGG+AGG 0.464666 2.4:-59717238 MS.gene003284:CDS
AGGTCTCGATACTACTGATC+TGG 0.469058 2.4:-59715820 MS.gene003284:CDS
TCAGCACAAGAAACAGTGTT+AGG 0.474603 2.4:+59716120 None:intergenic
AATTCAAAATCAGCAGAACT+TGG 0.476123 2.4:-59714271 MS.gene003284:CDS
AAGTAAGTTGTGTTAAGAGT+TGG 0.480928 2.4:+59714598 None:intergenic
AGATTCATCTGAGGAGGGTA+TGG 0.483874 2.4:-59714227 MS.gene003284:CDS
ACTGATCTGGTTGCACTCTC+CGG 0.486593 2.4:-59715807 MS.gene003284:intron
AATAGGCAGATGGTCCTGAC+TGG 0.492532 2.4:-59715956 MS.gene003284:intron
AAGGCTGCTATGATCAAAAT+GGG 0.500649 2.4:-59714352 MS.gene003284:CDS
CCTAAAGGAACCTTCCAGTC+AGG 0.502692 2.4:+59715942 None:intergenic
TTCGTGCCAGGTCCACCATT+GGG 0.506163 2.4:+59714553 None:intergenic
AGATGATAATTCAGCAGAAA+GGG 0.509857 2.4:+59716089 None:intergenic
GTATTGTGGTTGTGCTTGGA+GGG 0.513541 2.4:-59717237 MS.gene003284:CDS
AGTTGTGTTAAGAGTTGGAT+CGG 0.517053 2.4:+59714603 None:intergenic
TCAAATTTATCAGGAGTCGT+TGG 0.517441 2.4:+59714514 None:intergenic
GAAATATTGGTGTGTTAACC+GGG 0.517789 2.4:-59714330 MS.gene003284:CDS
AATAGCTTTGTGCTGTATTG+TGG 0.521315 2.4:-59717251 MS.gene003284:CDS
CCTTATGACTTCACGAACAA+TGG 0.525359 2.4:+59717147 None:intergenic
TCAGTAGTATTGAAAGGAGC+TGG 0.530365 2.4:+59715870 None:intergenic
ATATGTCCCAATGGTGGACC+TGG 0.533119 2.4:-59714559 MS.gene003284:CDS
TAGATGATAATTCAGCAGAA+AGG 0.533637 2.4:+59716088 None:intergenic
TACCGCTGAAGTTGTACAAT+CGG 0.535831 2.4:+59714635 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.538902 2.4:+59717210 None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG 0.546841 2.4:+59714552 None:intergenic
AGCATCTTGTTCACTCTCAA+CGG 0.549872 2.4:+59716215 None:intergenic
AGTTGATCAGTAGTATTGAA+AGG 0.552774 2.4:+59715864 None:intergenic
AAAGCTGCATTTGCTGCTCA+AGG 0.555072 2.4:-59715840 MS.gene003284:CDS
GTTGTGTTAAGAGTTGGATC+GGG 0.555195 2.4:+59714604 None:intergenic
GGCAGATGGTCCTGACTGGA+AGG 0.562824 2.4:-59715952 MS.gene003284:CDS
CTCAACAGATTCATCTGAGG+AGG 0.565301 2.4:-59714233 MS.gene003284:CDS
AGCTATTGCTACAGCACGAA+GGG 0.567185 2.4:+59717267 None:intergenic
ATTGTACAACTTCAGCGGTA+CGG 0.567546 2.4:-59714632 MS.gene003284:CDS
AGTTGTGCATTTGAAGAGAA+GGG 0.569161 2.4:+59717211 None:intergenic
TCGTTGGATCGAAATTGGTA+AGG 0.570774 2.4:+59714530 None:intergenic
CAAGTGTTCCTGTAAAAGGA+TGG 0.579502 2.4:+59717184 None:intergenic
GTTCCTTTAGGAAGAAGAGA+TGG 0.584332 2.4:-59715930 MS.gene003284:CDS
AAATTGGTAAGGTTCGTGCC+AGG 0.584556 2.4:+59714541 None:intergenic
CGCACAATATGTCCCAATGG+TGG 0.600150 2.4:-59714565 MS.gene003284:CDS
TGCTGAATTATCATCTACAC+TGG 0.600987 2.4:-59716082 MS.gene003284:intron
CTCCTCAGATGAATCTGTTG+AGG 0.607998 2.4:+59714234 None:intergenic
GAATCAAATCAAAACAGCTG+TGG 0.608984 2.4:-59716154 MS.gene003284:CDS
GATGAAATAAAATAGGCAGA+TGG 0.618837 2.4:-59715966 MS.gene003284:intron
AGCCGATTGTACAACTTCAG+CGG 0.631715 2.4:-59714637 MS.gene003284:CDS
TTGCGCACAATATGTCCCAA+TGG 0.640051 2.4:-59714568 MS.gene003284:CDS
GGTGTGTTAACCGGGAACCA+AGG 0.643371 2.4:-59714322 MS.gene003284:CDS
TCAACAGATTCATCTGAGGA+GGG 0.655752 2.4:-59714232 MS.gene003284:CDS
AAGCTATTGCTACAGCACGA+AGG 0.675693 2.4:+59717266 None:intergenic
ACAAGACTAGCAAGCATACG+AGG 0.681087 2.4:+59717106 None:intergenic
TGCCTCAACAGATTCATCTG+AGG 0.692262 2.4:-59714236 MS.gene003284:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr2.4:59715799-59715780 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG + chr2.4:59715800-59715781 None:intergenic 0.0%
!! TTTGTTTAAAAAATTCTAAT+TGG - chr2.4:59715723-59715742 MS.gene003284:intron 10.0%
!! AAAATATATAGTATAGTTTG+AGG + chr2.4:59715441-59715460 None:intergenic 15.0%
!! AAGATTTATCTATAGATAAT+TGG + chr2.4:59716323-59716342 None:intergenic 15.0%
!! AATTGAATTTGAAAATTCAA+TGG + chr2.4:59715473-59715492 None:intergenic 15.0%
!! GATTAAATTTATCTTATCAT+AGG - chr2.4:59715885-59715904 MS.gene003284:CDS 15.0%
!! TAGCAAATAAGTAATATATT+TGG - chr2.4:59714609-59714628 MS.gene003284:CDS 15.0%
!! TTATTATTAACAAAACAGAA+AGG + chr2.4:59714768-59714787 None:intergenic 15.0%
!!! ATTTTTCAAAAAAGAAAGAT+TGG + chr2.4:59715087-59715106 None:intergenic 15.0%
!!! GGTGAAATATTAATAATTTT+GGG - chr2.4:59716289-59716308 MS.gene003284:intron 15.0%
!!! TGGTGAAATATTAATAATTT+TGG - chr2.4:59716288-59716307 MS.gene003284:intron 15.0%
!!! TTACTAATTTTGCAATAATT+TGG + chr2.4:59715014-59715033 None:intergenic 15.0%
!! ACTTAAAAAATGTTACATAC+CGG + chr2.4:59715702-59715721 None:intergenic 20.0%
!! ATGTACTAATTCTACTTAAA+TGG + chr2.4:59714553-59714572 None:intergenic 20.0%
!! ATTAGTTGTATAACATAGAT+AGG + chr2.4:59714652-59714671 None:intergenic 20.0%
!! TCATACTACTATAAGATTAT+AGG + chr2.4:59714525-59714544 None:intergenic 20.0%
!! TGCTACAAAAAATTGAAATT+GGG - chr2.4:59716112-59716131 MS.gene003284:CDS 20.0%
!! TGTACTAATTCTACTTAAAT+GGG + chr2.4:59714552-59714571 None:intergenic 20.0%
!! TTGAAAAATAAAGATATCGA+TGG - chr2.4:59715098-59715117 MS.gene003284:intron 20.0%
!!! AAACTTGGATTTATTTGTTT+TGG - chr2.4:59716268-59716287 MS.gene003284:intron 20.0%
!!! GATTTTTATTAGCAAGTAAT+TGG + chr2.4:59715595-59715614 None:intergenic 20.0%
!!! GTTTTGTGATGAAATAAAAT+AGG - chr2.4:59715514-59715533 MS.gene003284:intron 20.0%
!!! TTTTTCTTCTTCTTTAAACT+TGG - chr2.4:59716253-59716272 MS.gene003284:CDS 20.0%
! AAAAAAATGAATCAGACGAA+AGG + chr2.4:59716482-59716501 None:intergenic 25.0%
! AAAAAATGAATCAGACGAAA+GGG + chr2.4:59716481-59716500 None:intergenic 25.0%
! AACCATTCATATTCATCTAA+GGG + chr2.4:59715863-59715882 None:intergenic 25.0%
! AGTTAAAAAGATGAACAGTT+TGG - chr2.4:59716435-59716454 MS.gene003284:intron 25.0%
! ATGAATCAATAAATCCAACT+TGG + chr2.4:59716400-59716419 None:intergenic 25.0%
! ATGATCAAAATGGGAAATAT+TGG - chr2.4:59717144-59717163 MS.gene003284:CDS 25.0%
! ATTACTATATCCGTATATGA+CGG - chr2.4:59714787-59714806 MS.gene003284:intron 25.0%
! CATGAAGATTTAGAAAAGAT+TGG - chr2.4:59716227-59716246 MS.gene003284:CDS 25.0%
! CTGCTACAAAAAATTGAAAT+TGG - chr2.4:59716111-59716130 MS.gene003284:CDS 25.0%
! GTACAACTTGTAAAAAAAAC+TGG + chr2.4:59716358-59716377 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG + chr2.4:59716985-59717004 None:intergenic 25.0%
! TATATATGTTTCTCGATTTC+AGG - chr2.4:59716787-59716806 MS.gene003284:intron 25.0%
! TCTAATCTTCAAGTGAAAAA+AGG - chr2.4:59717009-59717028 MS.gene003284:intron 25.0%
!! AAAAAAAACTGGTGATGATT+CGG + chr2.4:59716347-59716366 None:intergenic 25.0%
!! CAATCTTTTCTAAATCTTCA+TGG + chr2.4:59716229-59716248 None:intergenic 25.0%
!! CTCAAAAAAAGCTTTTTGAT+CGG + chr2.4:59717109-59717128 None:intergenic 25.0%
!!! AAAGGTATGGATTTTTAGAA+AGG + chr2.4:59716076-59716095 None:intergenic 25.0%
AACCCTTAGATGAATATGAA+TGG - chr2.4:59715858-59715877 MS.gene003284:CDS 30.0%
AAGTAAGTTGTGTTAAGAGT+TGG + chr2.4:59716892-59716911 None:intergenic 30.0%
AATTCAAAATCAGCAGAACT+TGG - chr2.4:59717216-59717235 MS.gene003284:CDS 30.0%
AGATGATAATTCAGCAGAAA+GGG + chr2.4:59715401-59715420 None:intergenic 30.0%
ATTATGCATGTTATTGTAGC+CGG + chr2.4:59715158-59715177 None:intergenic 30.0%
GAACCATTCATATTCATCTA+AGG + chr2.4:59715864-59715883 None:intergenic 30.0%
GATGAAATAAAATAGGCAGA+TGG - chr2.4:59715521-59715540 MS.gene003284:intron 30.0%
GCTATAAATTCTTGACTTCT+TGG - chr2.4:59714495-59714514 MS.gene003284:CDS 30.0%
GTGTTCTTTAAATTGATGTC+AGG - chr2.4:59716173-59716192 MS.gene003284:CDS 30.0%
TACTGACATGTTACATTCAA+TGG + chr2.4:59714842-59714861 None:intergenic 30.0%
TAGATGATAATTCAGCAGAA+AGG + chr2.4:59715402-59715421 None:intergenic 30.0%
TGTTATTATGAGAGATGAGA+GGG - chr2.4:59715826-59715845 MS.gene003284:CDS 30.0%
! AACGTGATTTTTCCAGATTT+AGG + chr2.4:59716541-59716560 None:intergenic 30.0%
! AGTTGATCAGTAGTATTGAA+AGG + chr2.4:59715626-59715645 None:intergenic 30.0%
! ATTGTTTTCTAATCTCTCCT+TGG + chr2.4:59717185-59717204 None:intergenic 30.0%
!! GAATTTGTTGACAATGCTAA+TGG + chr2.4:59717082-59717101 None:intergenic 30.0%
!! TGACTGACTTTAAAACCTTT+AGG + chr2.4:59715124-59715143 None:intergenic 30.0%
!!! AGCTTTTTTTGAGAGCTTTA+AGG - chr2.4:59717116-59717135 MS.gene003284:CDS 30.0%
!!! TCAATTTTTTGTAGCAGTAG+TGG + chr2.4:59716108-59716127 None:intergenic 30.0%
AAAAATGCCTTGCCTAAATC+TGG - chr2.4:59716526-59716545 MS.gene003284:intron 35.0%
AAACCATCTCTTCTTCCTAA+AGG + chr2.4:59715563-59715582 None:intergenic 35.0%
AAGGCTGCTATGATCAAAAT+GGG - chr2.4:59717135-59717154 MS.gene003284:CDS 35.0%
AAGTTGTGCATTTGAAGAGA+AGG + chr2.4:59714280-59714299 None:intergenic 35.0%
AATCAAAACAGCTGTGGAAA+AGG - chr2.4:59715339-59715358 MS.gene003284:intron 35.0%
AGTTGTGCATTTGAAGAGAA+GGG + chr2.4:59714279-59714298 None:intergenic 35.0%
AGTTGTGTTAAGAGTTGGAT+CGG + chr2.4:59716887-59716906 None:intergenic 35.0%
ATAAATCCAACTTGGTACCT+AGG + chr2.4:59716392-59716411 None:intergenic 35.0%
ATAACTCAGAGAGAGAAGAA+AGG + chr2.4:59715965-59715984 None:intergenic 35.0%
CACAGTAAAGATTGATCCAA+AGG - chr2.4:59716658-59716677 MS.gene003284:intron 35.0%
CAGAAACTCATTAAGAGGTT+TGG - chr2.4:59715303-59715322 MS.gene003284:intron 35.0%
CCAAACAGAAACTCATTAAG+AGG - chr2.4:59715298-59715317 MS.gene003284:intron 35.0%
CCTCTTAATGAGTTTCTGTT+TGG + chr2.4:59715301-59715320 None:intergenic 35.0%
CGAACAATGGAACTAACATT+TGG + chr2.4:59714330-59714349 None:intergenic 35.0%
CTTTCTTTCGTTTGTCTTCT+TGG - chr2.4:59715919-59715938 MS.gene003284:CDS 35.0%
GAAATATTGGTGTGTTAACC+GGG - chr2.4:59717157-59717176 MS.gene003284:CDS 35.0%
GAATCAAATCAAAACAGCTG+TGG - chr2.4:59715333-59715352 MS.gene003284:intron 35.0%
GGAAATATTGGTGTGTTAAC+CGG - chr2.4:59717156-59717175 MS.gene003284:CDS 35.0%
GTCAGTCATGTAAAGTTATC+CGG - chr2.4:59715136-59715155 MS.gene003284:intron 35.0%
TAAAGATATCGATGGCCTAA+AGG - chr2.4:59715106-59715125 MS.gene003284:intron 35.0%
TAAAGATTGATCCAAAGGCT+AGG - chr2.4:59716663-59716682 MS.gene003284:intron 35.0%
TAAGGCTGCTATGATCAAAA+TGG - chr2.4:59717134-59717153 MS.gene003284:CDS 35.0%
TAGAGGACATATCAAATGAG+AGG - chr2.4:59715801-59715820 MS.gene003284:intron 35.0%
TCAAATTTATCAGGAGTCGT+TGG + chr2.4:59716976-59716995 None:intergenic 35.0%
TGCTGAATTATCATCTACAC+TGG - chr2.4:59715405-59715424 MS.gene003284:intron 35.0%
TTGTACTTTCATGAGAACCT+AGG - chr2.4:59716372-59716391 MS.gene003284:intron 35.0%
! AACTTGATCCATCCTTTTAC+AGG - chr2.4:59714295-59714314 MS.gene003284:CDS 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.4:59716802-59716821 MS.gene003284:intron 35.0%
! GAGAATTAAATCCTAGCCTT+TGG + chr2.4:59716677-59716696 None:intergenic 35.0%
! GATTTTTCCAGATTTAGGCA+AGG + chr2.4:59716536-59716555 None:intergenic 35.0%
! GTGTTATTATGAGAGATGAG+AGG - chr2.4:59715825-59715844 MS.gene003284:CDS 35.0%
! TATTCGAACTCAAGTTTGCT+AGG + chr2.4:59714720-59714739 None:intergenic 35.0%
!! AAAAGAAGTAGAGTTGATGC+AGG + chr2.4:59716040-59716059 None:intergenic 35.0%
!! AAATGGCTTTGTGTTGGAAT+CGG + chr2.4:59716015-59716034 None:intergenic 35.0%
!! AATAGCTTTGTGCTGTATTG+TGG - chr2.4:59714236-59714255 MS.gene003284:CDS 35.0%
!! GTGTTGAATGATTAGTTCTG+AGG + chr2.4:59714943-59714962 None:intergenic 35.0%
!! TAGAGTTGATGCAGGAAAAA+TGG + chr2.4:59716032-59716051 None:intergenic 35.0%
!! TGAATGATTAGTTCTGAGGT+GGG + chr2.4:59714939-59714958 None:intergenic 35.0%
!! TTGAATGATTAGTTCTGAGG+TGG + chr2.4:59714940-59714959 None:intergenic 35.0%
!!! TTTTTGTAGCAGTAGTGGAT+TGG + chr2.4:59716103-59716122 None:intergenic 35.0%
AATCAGACGAAAGGGAAGTT+GGG + chr2.4:59716473-59716492 None:intergenic 40.0%
ACTATATCCGTATATGACGG+TGG - chr2.4:59714790-59714809 MS.gene003284:intron 40.0%
AGAGAGAGAAGAAAGGAAGA+TGG + chr2.4:59715958-59715977 None:intergenic 40.0%
AGCATCTTGTTCACTCTCAA+CGG + chr2.4:59715275-59715294 None:intergenic 40.0%
ATGTGATCCATGACTGTAAC+AGG - chr2.4:59715213-59715232 MS.gene003284:intron 40.0%
ATTGTACAACTTCAGCGGTA+CGG - chr2.4:59716855-59716874 MS.gene003284:intron 40.0%
CAAGAGTTGTTCTCAACATC+TGG - chr2.4:59717048-59717067 MS.gene003284:intron 40.0%
CAAGTGTTCCTGTAAAAGGA+TGG + chr2.4:59714306-59714325 None:intergenic 40.0%
CCATTGTTCGTGAAGTCATA+AGG - chr2.4:59714340-59714359 MS.gene003284:CDS 40.0%
CCTTATGACTTCACGAACAA+TGG + chr2.4:59714343-59714362 None:intergenic 40.0%
CTATATCCGTATATGACGGT+GGG - chr2.4:59714791-59714810 MS.gene003284:intron 40.0%
GAAGAAACAACAACAGCAAC+AGG - chr2.4:59716570-59716589 MS.gene003284:intron 40.0%
GAGACGGTTGGAAATAATGA+AGG - chr2.4:59716594-59716613 MS.gene003284:intron 40.0%
GAGAGAGAAGAAAGGAAGAT+GGG + chr2.4:59715957-59715976 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+GGG + chr2.4:59716886-59716905 None:intergenic 40.0%
TACCGCTGAAGTTGTACAAT+CGG + chr2.4:59716855-59716874 None:intergenic 40.0%
TCAACAGATTCATCTGAGGA+GGG - chr2.4:59717255-59717274 MS.gene003284:CDS 40.0%
TCAGCACAAGAAACAGTGTT+AGG + chr2.4:59715370-59715389 None:intergenic 40.0%
TCGTTGGATCGAAATTGGTA+AGG + chr2.4:59716960-59716979 None:intergenic 40.0%
TGGACAAGTGTTCCTGTAAA+AGG + chr2.4:59714310-59714329 None:intergenic 40.0%
TGTGATCCATGACTGTAACA+GGG - chr2.4:59715214-59715233 MS.gene003284:intron 40.0%
! GTTCCTTTAGGAAGAAGAGA+TGG - chr2.4:59715557-59715576 MS.gene003284:intron 40.0%
! TCAGTAGTATTGAAAGGAGC+TGG + chr2.4:59715620-59715639 None:intergenic 40.0%
!! CAGGAAAAATGGCTTTGTGT+TGG + chr2.4:59716021-59716040 None:intergenic 40.0%
!! CAGTAGTGGATTGGTTGAAA+AGG + chr2.4:59716094-59716113 None:intergenic 40.0%
!! GTGGATTGGTTGAAAAGGTA+TGG + chr2.4:59716089-59716108 None:intergenic 40.0%
AAATTGGTAAGGTTCGTGCC+AGG + chr2.4:59716949-59716968 None:intergenic 45.0%
AACAACAGCAACAGGAGAGA+CGG - chr2.4:59716578-59716597 MS.gene003284:intron 45.0%
AAGCTATTGCTACAGCACGA+AGG + chr2.4:59714224-59714243 None:intergenic 45.0%
ACAAGACTAGCAAGCATACG+AGG + chr2.4:59714384-59714403 None:intergenic 45.0%
ACATAGATAGGAGCAGCACA+AGG + chr2.4:59714640-59714659 None:intergenic 45.0%
AGATTCATCTGAGGAGGGTA+TGG - chr2.4:59717260-59717279 MS.gene003284:CDS 45.0%
AGCCGATTGTACAACTTCAG+CGG - chr2.4:59716850-59716869 MS.gene003284:intron 45.0%
AGCTATTGCTACAGCACGAA+GGG + chr2.4:59714223-59714242 None:intergenic 45.0%
AGGAGTCGTTGGATCGAAAT+TGG + chr2.4:59716965-59716984 None:intergenic 45.0%
AGGTCTCGATACTACTGATC+TGG - chr2.4:59715667-59715686 MS.gene003284:intron 45.0%
CTCAACAGATTCATCTGAGG+AGG - chr2.4:59717254-59717273 MS.gene003284:CDS 45.0%
CTCCTCAGATGAATCTGTTG+AGG + chr2.4:59717256-59717275 None:intergenic 45.0%
CTTTGTGTTGGAATCGGAGA+AGG + chr2.4:59716009-59716028 None:intergenic 45.0%
GAAAGGAAGATGGGTGAATG+CGG + chr2.4:59715948-59715967 None:intergenic 45.0%
GAATCAGACGAAAGGGAAGT+TGG + chr2.4:59716474-59716493 None:intergenic 45.0%
GTATTGTGGTTGTGCTTGGA+GGG - chr2.4:59714250-59714269 MS.gene003284:CDS 45.0%
TCACAACCCTGTTACAGTCA+TGG + chr2.4:59715223-59715242 None:intergenic 45.0%
TCTAATCTCTCCTTGGTTCC+CGG + chr2.4:59717178-59717197 None:intergenic 45.0%
TGAGAACCTAGGTACCAAGT+TGG - chr2.4:59716383-59716402 MS.gene003284:intron 45.0%
TGCCTCAACAGATTCATCTG+AGG - chr2.4:59717251-59717270 MS.gene003284:CDS 45.0%
TGCTGTATTGTGGTTGTGCT+TGG - chr2.4:59714246-59714265 MS.gene003284:CDS 45.0%
TGTATTGTGGTTGTGCTTGG+AGG - chr2.4:59714249-59714268 MS.gene003284:CDS 45.0%
TTGCGCACAATATGTCCCAA+TGG - chr2.4:59716919-59716938 MS.gene003284:intron 45.0%
TTGTACAACTTCAGCGGTAC+GGG - chr2.4:59716856-59716875 MS.gene003284:intron 45.0%
! AAAGCTGCATTTGCTGCTCA+AGG - chr2.4:59715647-59715666 MS.gene003284:intron 45.0%
!! GTATGCTTGCTAGTCTTGTC+AGG - chr2.4:59714385-59714404 MS.gene003284:CDS 45.0%
!! ATATATATATATATATATAG+AGG - chr2.4:59715784-59715803 MS.gene003284:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr2.4:59715803-59715784 None:intergenic 5.0%
!!! TAATGTATATTTTTTTTTTT+TGG + chr2.4:59714894-59714913 None:intergenic 5.0%
AATAGGCAGATGGTCCTGAC+TGG - chr2.4:59715531-59715550 MS.gene003284:intron 50.0%
ACTGATCTGGTTGCACTCTC+CGG - chr2.4:59715680-59715699 MS.gene003284:intron 50.0%
ATATGACGGTGGGTCGAACA+AGG - chr2.4:59714801-59714820 MS.gene003284:intron 50.0%
CCTAAAGGAACCTTCCAGTC+AGG + chr2.4:59715548-59715567 None:intergenic 50.0%
CCTGACTGGAAGGTTCCTTT+AGG - chr2.4:59715545-59715564 MS.gene003284:intron 50.0%
CGCACAATATGTCCCAATGG+TGG - chr2.4:59716922-59716941 MS.gene003284:intron 50.0%
GGAGAAGGCAGTTTGGAAGA+AGG + chr2.4:59715994-59716013 None:intergenic 50.0%
GTTCGACCCACCGTCATATA+CGG + chr2.4:59714800-59714819 None:intergenic 50.0%
TGGAATCGGAGAAGGCAGTT+TGG + chr2.4:59716001-59716020 None:intergenic 50.0%
!! ATATGTCCCAATGGTGGACC+TGG - chr2.4:59716928-59716947 MS.gene003284:intron 50.0%
ACAGCAACAGGAGAGACGGT+TGG - chr2.4:59716582-59716601 MS.gene003284:intron 55.0%
GGTGTGTTAACCGGGAACCA+AGG - chr2.4:59717165-59717184 MS.gene003284:CDS 55.0%
TTCGTGCCAGGTCCACCATT+GGG + chr2.4:59716937-59716956 None:intergenic 55.0%
GGCAGATGGTCCTGACTGGA+AGG - chr2.4:59715535-59715554 MS.gene003284:intron 60.0%
GTTCGTGCCAGGTCCACCAT+TGG + chr2.4:59716938-59716957 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 59714213 59717296 59714213 ID=MS.gene003284
chr2.4 mRNA 59714213 59717296 59714213 ID=MS.gene003284.t1;Parent=MS.gene003284
chr2.4 exon 59717075 59717296 59717075 ID=MS.gene003284.t1.exon1;Parent=MS.gene003284.t1
chr2.4 CDS 59717075 59717296 59717075 ID=cds.MS.gene003284.t1;Parent=MS.gene003284.t1
chr2.4 exon 59716083 59716274 59716083 ID=MS.gene003284.t1.exon2;Parent=MS.gene003284.t1
chr2.4 CDS 59716083 59716274 59716083 ID=cds.MS.gene003284.t1;Parent=MS.gene003284.t1
chr2.4 exon 59715808 59715973 59715808 ID=MS.gene003284.t1.exon3;Parent=MS.gene003284.t1
chr2.4 CDS 59715808 59715973 59715808 ID=cds.MS.gene003284.t1;Parent=MS.gene003284.t1
chr2.4 exon 59714213 59714700 59714213 ID=MS.gene003284.t1.exon4;Parent=MS.gene003284.t1
chr2.4 CDS 59714213 59714700 59714213 ID=cds.MS.gene003284.t1;Parent=MS.gene003284.t1
Gene Sequence

>MS.gene003284

ATGAACTCCCTTCGTGCTGTAGCAATAGCTTTGTGCTGTATTGTGGTTGTGCTTGGAGGGTTACCCTTCTCTTCAAATGCACAACTTGATCCATCCTTTTACAGGAACACTTGTCCAAATGTTAGTTCCATTGTTCGTGAAGTCATAAGGAGTGTTTCTAAGAAAGATCCTCGTATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGTATGTGTACTTTCTAGTTTTTGCATATTCATTCATTCATTTACTTATTGTGTATGACATGCTATAAATTCTTGACTTCTTGGTATACCTATAATCTTATAGTAGTATGATCTTCCCATTTAAGTAGAATTAGTACATAGTAAGATATAATATAAATTAGAATAAAGTCAAATATAGCAAATAAGTAATATATTTGGCATATCCTTGTGCTGCTCCTATCTATGTTATACAACTAATAGTATAACATATGTTATGCAACTAAAAAATATATCAAGTAATATACCTAGCAAACTTGAGTTCGAATAGTGACTTTACTATTAGATATCTTTGCCTTTCTGTTTTGTTAATAATAATTACTATATCCGTATATGACGGTGGGTCGAACAAGGTTAGTTATATTATATCCATTGAATGTAACATGTCAGTAATAAAAAAATGCATTATTAATTTTCTCAACCAAAAAAAAAAAATATACATTATAACATTCTTAAGTAGATATTTCCCACCTCAGAACTAATCATTCAACACTCTGTTTTCAATGTTCTTTCTTATTCTAATACACAATAAAAAAAGACTCCAAATTATTGCAAAATTAGTAATGCAAAGAGATTGCATAAAGTACTATTTTTTTTCTTTTAAATATTTCAATCCAATCTTTCTTTTTTGAAAAATAAAGATATCGATGGCCTAAAGGTTTTAAAGTCAGTCATGTAAAGTTATCCGGCTACAATAACATGCATAATATTATTAAGCTTATGTTATAATCATAATTTAAATTATGTGATCCATGACTGTAACAGGGTTGTGATGCATCAGTTTTACTAAACAAAACTGATACCGTTGAGAGTGAACAAGATGCTTTTCCAAACAGAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAAGGCTTGTCCTAACACTGTTTCTTGTGCTGATATTCTTGCCCTTTCTGCTGAATTATCATCTACACTGGTATATATATTCCTCAAACTATACTATATATTTTTCTCATTTACCATTGAATTTTCAAATTCAATTTCTTATTAACTCTGCTTATTTGTTTTGTGATGAAATAAAATAGGCAGATGGTCCTGACTGGAAGGTTCCTTTAGGAAGAAGAGATGGTTTAACAGCAAACCAATTACTTGCTAATAAAAATCTTCCAGCTCCTTTCAATACTACTGATCAACTTAAAGCTGCATTTGCTGCTCAAGGTCTCGATACTACTGATCTGGTTGCACTCTCCGGTATGTAACATTTTTTAAGTTTTTGTTTAAAAAATTCTAATTGGTCGTTACAATGATGACGCGAATGTTACAAGAATAATATATATATATATATATATATAGAGGACATATCAAATGAGAGGAGTGTTATTATGAGAGATGAGAGGGTTTAATTACAACCCTTAGATGAATATGAATGGTTCAGATTAAATTTATCTTATCATAGGTAAGCACAATTCTTTCTTTCGTTTGTCTTCTTGGTAGCCGCATTCACCCATCTTCCTTTCTTCTCTCTCTGAGTTATGTTTTTCCTTCTTCCAAACTGCCTTCTCCGATTCCAACACAAAGCCATTTTTCCTGCATCAACTCTACTTCTTTTCTTCTTCTTTTTTCCTTTCTAAAAATCCATACCTTTTCAACCAATCCACTACTGCTACAAAAAATTGAAATTGGGATAAATTATGAAATTCAATGAAAAAACTATGAAATTATGTGTTCTTTAAATTGATGTCAGGAACATTGAACAAATGCAGCATGAACGAAATCCATGAAGATTTAGAAAAGATTGGATTTTTTTCTTCTTCTTTAAACTTGGATTTATTTGTTTTGGTGAAATATTAATAATTTTGGGTTCATGATCCAATTATCTATAGATAAATCTTGCCGAATCATCACCAGTTTTTTTTACAAGTTGTACTTTCATGAGAACCTAGGTACCAAGTTGGATTTATTGATTCATGTTTAATTAATTTATAGTTAAAAAGATGAACAGTTTGGAAAAAAAATTATCCCAACTTCCCTTTCGTCTGATTCATTTTTTTATAAAAAATTAGACTTGATACAAGAAAAATGCCTTGCCTAAATCTGGAAAAATCACGTTTTAAGAAAAGAAGAAACAACAACAGCAACAGGAGAGACGGTTGGAAATAATGAAGGCGATGAAATGATTATAAGATGTAGATTTAAAAATTAAAGTACACAGTAAAGATTGATCCAAAGGCTAGGATTTAATTCTCTCATCTCTCATTATAAGTAGTGCTCTCATTTGATACATCCCCTATATATATATATATATATATATATATATATATATATGATTATGTATTTATATATGTTTCTCGATTTCAGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGCCGATTGTACAACTTCAGCGGTACGGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTATTACTCTAATCTTCAAGTGAAAAAAGGTTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTTCAGATACCATTAGCATTGTCAACAAATTCGCAACCGATCAAAAAGCTTTTTTTGAGAGCTTTAAGGCTGCTATGATCAAAATGGGAAATATTGGTGTGTTAACCGGGAACCAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCAGCAGAACTTGGTCTTATCAATGTTGCCTCAACAGATTCATCTGAGGAGGGTATGGTTAGCTCAATGTAA
Protein sequence

>MS.gene003284.t1

MNSLRAVAIALCCIVVVLGGLPFSSNAQLDPSFYRNTCPNVSSIVREVIRSVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVESEQDAFPNRNSLRGLDVVNQIKTAVEKACPNTVSCADILALSAELSSTLADGPDWKVPLGRRDGLTANQLLANKNLPAPFNTTDQLKAAFAAQGLDTTDLVALSGAHTFGRAHCSLFVSRLYNFSGTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGSDTISIVNKFATDQKAFFESFKAAMIKMGNIGVLTGNQGEIRKQCNFVNSKSAELGLINVASTDSSEEGMVSSM