AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03140.t1 MTR_2g029560 96.221 344 13 0 1 344 1 344 0.0 677
MS.gene03140.t1 MTR_2g029730 83.768 345 55 1 1 344 1 345 0.0 589
MS.gene03140.t1 MTR_2g029740 68.437 339 102 1 1 334 1 339 2.91e-169 475
MS.gene03140.t1 MTR_2g029820 66.964 336 106 1 1 331 1 336 1.16e-166 469
MS.gene03140.t1 MTR_2g029800 66.964 336 106 1 1 331 1 336 1.76e-165 466
MS.gene03140.t1 MTR_2g029815 68.155 336 102 1 1 331 1 336 1.30e-164 463
MS.gene03140.t1 MTR_2g029830 71.613 310 88 0 22 331 26 335 8.63e-163 459
MS.gene03140.t1 MTR_2g029750 63.953 344 119 1 1 339 1 344 9.00e-161 454
MS.gene03140.t1 MTR_2g028980 66.159 328 111 0 9 336 14 341 3.12e-159 450
MS.gene03140.t1 MTR_2g029860 64.023 353 115 3 4 344 1 353 1.46e-155 440
MS.gene03140.t1 MTR_2g029850 62.784 352 123 2 1 344 1 352 1.19e-153 436
MS.gene03140.t1 MTR_2g029910 63.265 343 118 3 10 344 11 353 1.14e-152 433
MS.gene03140.t1 MTR_2g029830 73.384 263 70 0 69 331 5 267 3.27e-140 399
MS.gene03140.t1 MTR_7g093370 57.595 316 133 1 12 326 57 372 4.97e-125 363
MS.gene03140.t1 MTR_1g054205 53.823 327 150 1 1 326 1 327 4.17e-123 357
MS.gene03140.t1 MTR_4g125940 52.769 307 141 2 22 326 26 330 4.12e-108 319
MS.gene03140.t1 MTR_5g021060 50.993 302 147 1 24 325 30 330 2.46e-107 317
MS.gene03140.t1 MTR_8g076820 49.669 302 151 1 24 325 30 330 1.57e-104 310
MS.gene03140.t1 MTR_5g017850 51.148 305 145 3 22 325 25 326 4.62e-103 306
MS.gene03140.t1 MTR_5g017860 49.843 319 155 4 9 325 11 326 5.58e-102 303
MS.gene03140.t1 MTR_4g125940 55.072 276 120 2 53 326 2 275 1.15e-101 301
MS.gene03140.t1 MTR_2g040000 48.860 307 152 2 23 326 28 332 1.51e-99 297
MS.gene03140.t1 MTR_3g094650 50.662 302 138 4 22 321 26 318 1.54e-97 292
MS.gene03140.t1 MTR_1g022970 48.013 302 157 0 24 325 46 347 1.83e-97 293
MS.gene03140.t1 MTR_4g029200 47.869 305 150 2 21 325 43 338 3.07e-97 291
MS.gene03140.t1 MTR_5g074970 45.872 327 164 5 3 325 9 326 7.04e-97 290
MS.gene03140.t1 MTR_5g074760 47.302 315 155 5 14 325 15 321 2.90e-96 288
MS.gene03140.t1 MTR_5g074740 47.302 315 155 5 14 325 15 321 5.27e-96 288
MS.gene03140.t1 MTR_2g084080 45.652 322 166 2 4 325 5 317 1.26e-95 287
MS.gene03140.t1 MTR_4g122640 46.689 302 158 2 24 325 38 336 1.95e-95 287
MS.gene03140.t1 MTR_2g084110 48.852 305 145 3 22 325 23 317 2.97e-95 286
MS.gene03140.t1 MTR_5g074860 47.712 306 149 4 22 324 27 324 1.34e-94 285
MS.gene03140.t1 MTR_4g029190 47.883 307 148 4 22 325 43 340 3.06e-94 284
MS.gene03140.t1 MTR_4g029170 46.708 319 157 5 10 325 13 321 7.48e-94 282
MS.gene03140.t1 MTR_3g466200 46.372 317 158 5 12 325 13 320 8.35e-94 282
MS.gene03140.t1 MTR_3g072190 46.535 303 153 2 23 325 25 318 8.45e-94 282
MS.gene03140.t1 MTR_5g083860 46.440 323 160 5 7 325 12 325 8.70e-94 282
MS.gene03140.t1 MTR_5g049280 44.720 322 169 4 10 325 19 337 1.00e-93 283
MS.gene03140.t1 MTR_2g084090 47.213 305 151 3 22 325 23 318 1.54e-93 281
MS.gene03140.t1 MTR_5g074710 46.984 315 156 5 14 325 15 321 1.88e-93 281
MS.gene03140.t1 MTR_7g072510 46.711 304 153 2 22 325 18 312 2.92e-93 280
MS.gene03140.t1 MTR_5g014100 46.452 310 162 2 20 325 22 331 5.61e-93 280
MS.gene03140.t1 MTR_4g083710 49.511 307 145 4 22 325 25 324 8.71e-93 280
MS.gene03140.t1 MTR_3g094670 47.095 327 158 5 1 321 1 318 1.17e-91 277
MS.gene03140.t1 MTR_7g072480 46.711 304 153 2 22 325 22 316 5.03e-91 275
MS.gene03140.t1 MTR_4g029180 48.333 300 144 4 28 325 31 321 6.79e-91 275
MS.gene03140.t1 MTR_2g084010 44.479 326 172 3 1 325 1 318 1.35e-90 274
MS.gene03140.t1 MTR_2g084020 44.479 326 172 3 1 325 1 318 1.77e-90 274
MS.gene03140.t1 MTR_3g094630 47.468 316 155 4 12 325 16 322 3.57e-89 270
MS.gene03140.t1 MTR_1g115900 43.038 316 168 5 13 326 17 322 4.26e-86 263
MS.gene03140.t1 MTR_2g084000 44.918 305 158 4 22 325 24 319 4.42e-86 263
MS.gene03140.t1 MTR_4g074995 47.231 307 139 4 22 325 22 308 6.59e-86 261
MS.gene03140.t1 MTR_7g026990 43.692 325 164 6 6 326 14 323 1.39e-85 261
MS.gene03140.t1 MTR_3g466180 43.810 315 167 3 11 325 19 323 9.77e-85 259
MS.gene03140.t1 MTR_3g467600 44.625 307 160 3 22 325 25 324 2.73e-84 258
MS.gene03140.t1 MTR_4g046713 41.896 327 185 5 1 325 3 326 2.71e-83 256
MS.gene03140.t1 MTR_4g133800 43.960 298 156 6 29 325 46 333 6.85e-83 255
MS.gene03140.t1 MTR_2g029880 61.137 211 70 3 136 344 9 209 2.26e-82 249
MS.gene03140.t1 MTR_2g088770 42.105 323 180 6 5 325 8 325 1.13e-81 251
MS.gene03140.t1 MTR_4g030890 42.763 304 169 3 22 325 98 396 1.35e-81 254
MS.gene03140.t1 MTR_2g008710 45.033 302 155 5 28 325 31 325 1.80e-81 251
MS.gene03140.t1 MTR_4g031140 42.763 304 167 4 24 326 28 325 1.48e-80 249
MS.gene03140.t1 MTR_4g074990 42.378 328 163 3 1 325 1 305 2.21e-80 247
MS.gene03140.t1 MTR_4g114210 43.042 309 164 6 22 325 19 320 1.52e-79 246
MS.gene03140.t1 MTR_1g101830 39.077 325 192 4 1 325 4 322 2.57e-79 245
MS.gene03140.t1 MTR_5g022870 42.574 303 164 7 24 325 23 316 4.61e-79 244
MS.gene03140.t1 MTR_6g043280 41.846 325 169 7 10 325 19 332 1.53e-78 244
MS.gene03140.t1 MTR_2g437770 43.092 304 161 6 24 326 50 342 1.82e-78 244
MS.gene03140.t1 MTR_1g086320 40.606 330 185 4 5 325 6 333 9.84e-78 241
MS.gene03140.t1 MTR_3g092990 40.065 307 181 2 21 326 23 327 3.89e-77 240
MS.gene03140.t1 MTR_1g077000 41.722 302 163 5 24 325 39 327 6.40e-77 239
MS.gene03140.t1 MTR_1g038680 42.244 303 167 5 28 325 33 332 7.45e-77 239
MS.gene03140.t1 MTR_1g086490 40.774 336 181 5 6 325 7 340 3.59e-76 238
MS.gene03140.t1 MTR_7g107520 41.250 320 181 5 6 325 8 320 1.58e-75 235
MS.gene03140.t1 MTR_3g072190 45.174 259 133 2 67 325 2 251 2.24e-75 233
MS.gene03140.t1 MTR_1g025980 41.254 303 169 6 24 325 24 318 3.31e-75 234
MS.gene03140.t1 MTR_8g075100 41.584 303 167 7 24 325 26 319 3.84e-75 234
MS.gene03140.t1 MTR_6g043240 41.441 333 170 8 10 331 19 337 2.16e-74 234
MS.gene03140.t1 MTR_0155s0040 39.062 320 181 6 6 325 10 315 6.50e-74 231
MS.gene03140.t1 MTR_5g074860 41.830 306 128 5 22 324 27 285 3.91e-73 228
MS.gene03140.t1 MTR_7g086820 39.869 306 175 5 20 325 16 312 8.06e-73 228
MS.gene03140.t1 MTR_4g074980 42.105 304 144 4 22 325 23 294 8.97e-73 228
MS.gene03140.t1 MTR_6g027440 40.994 322 182 5 4 325 1 314 9.22e-71 223
MS.gene03140.t1 MTR_4g074980 47.257 237 116 2 22 255 23 253 1.64e-70 220
MS.gene03140.t1 MTR_5g016010 39.039 333 189 8 1 324 1 328 2.73e-70 222
MS.gene03140.t1 MTR_7g029030 40.122 329 181 7 4 325 1 320 4.16e-70 221
MS.gene03140.t1 MTR_4g132490 39.016 305 179 4 23 325 28 327 4.10e-69 219
MS.gene03140.t1 MTR_1g090760 38.436 307 184 4 22 325 26 330 1.03e-68 218
MS.gene03140.t1 MTR_1g009750 39.458 332 190 7 1 325 1 328 1.57e-68 218
MS.gene03140.t1 MTR_6g043460 42.000 300 161 6 24 321 36 324 2.73e-68 218
MS.gene03140.t1 MTR_2g008160 41.479 311 166 9 22 325 22 323 9.36e-67 213
MS.gene03140.t1 MTR_4g087965 38.361 305 181 5 23 322 41 343 1.59e-66 213
MS.gene03140.t1 MTR_3g092990 37.785 307 177 3 21 326 23 316 1.28e-64 207
MS.gene03140.t1 MTR_4g127670 39.073 302 176 4 23 321 23 319 3.67e-64 206
MS.gene03140.t1 MTR_4g095450 37.576 330 193 5 1 324 1 323 3.75e-64 206
MS.gene03140.t1 MTR_7g086870 37.377 305 179 5 22 326 20 312 6.67e-63 203
MS.gene03140.t1 MTR_8g062780 34.906 318 203 3 10 325 9 324 1.75e-62 202
MS.gene03140.t1 MTR_3g105790 39.934 303 172 4 22 321 23 318 1.95e-62 202
MS.gene03140.t1 MTR_2g008730 45.306 245 126 4 85 325 61 301 3.19e-62 201
MS.gene03140.t1 MTR_2g099175 37.338 308 181 5 23 325 35 335 1.55e-60 197
MS.gene03140.t1 MTR_5g033470 36.774 310 187 6 22 325 71 377 2.78e-60 198
MS.gene03140.t1 MTR_1g009750 36.970 330 184 8 1 325 1 311 3.17e-59 193
MS.gene03140.t1 MTR_0286s0010 37.013 308 185 7 22 325 32 334 1.97e-58 192
MS.gene03140.t1 MTR_6g008075 37.013 308 185 7 22 325 32 334 1.97e-58 192
MS.gene03140.t1 MTR_2g067440 33.634 333 187 6 22 324 58 386 4.18e-56 187
MS.gene03140.t1 MTR_2g078610 34.835 333 182 7 22 322 74 403 6.46e-55 185
MS.gene03140.t1 MTR_2g077990 34.835 333 182 7 22 322 74 403 1.04e-54 184
MS.gene03140.t1 MTR_1g066710 33.762 311 195 4 20 327 23 325 1.06e-54 182
MS.gene03140.t1 MTR_1g066380 34.084 311 194 4 20 327 23 325 3.04e-54 181
MS.gene03140.t1 MTR_1g066640 34.405 311 193 4 20 327 23 325 3.11e-53 178
MS.gene03140.t1 MTR_1g066680 34.405 311 192 5 20 327 23 324 1.17e-52 177
MS.gene03140.t1 MTR_2g008160 36.977 311 145 9 22 325 22 288 1.36e-52 175
MS.gene03140.t1 MTR_0147s0010 32.087 321 182 3 24 324 77 381 2.01e-51 175
MS.gene03140.t1 MTR_2g078280 34.472 322 176 7 22 311 74 392 1.58e-49 170
MS.gene03140.t1 MTR_2g067450 35.505 307 188 7 22 324 9 309 2.00e-49 168
MS.gene03140.t1 MTR_5g074700 42.241 232 109 6 97 325 5 214 2.30e-49 165
MS.gene03140.t1 MTR_3g072210 43.750 192 99 3 135 325 55 238 2.40e-46 157
MS.gene03140.t1 MTR_3g105790 41.026 234 132 3 91 321 12 242 6.09e-46 157
MS.gene03140.t1 MTR_2g008160 47.024 168 85 3 22 189 22 185 8.61e-46 155
MS.gene03140.t1 MTR_1g066380 34.601 263 161 4 68 327 3 257 1.03e-44 154
MS.gene03140.t1 MTR_4g132110 32.558 301 192 4 28 325 36 328 2.14e-44 155
MS.gene03140.t1 MTR_4g132110 32.026 306 192 5 28 325 36 333 3.69e-42 150
MS.gene03140.t1 MTR_7g072490 37.200 250 94 4 70 319 2 188 9.41e-40 139
MS.gene03140.t1 MTR_3g072260 47.328 131 62 1 11 134 6 136 1.33e-32 119
MS.gene03140.t1 MTR_5g058120 40.491 163 84 4 159 321 6 155 3.76e-28 110
MS.gene03140.t1 MTR_2g029930 57.000 100 15 3 22 107 17 102 1.30e-25 99.4
MS.gene03140.t1 MTR_2g078560 29.204 226 127 4 130 324 96 319 3.23e-25 103
MS.gene03140.t1 MTR_7g086790 31.383 188 107 4 71 258 17 182 1.67e-22 93.6
MS.gene03140.t1 MTR_2g077980 28.058 278 152 10 86 322 11 281 2.72e-21 92.4
MS.gene03140.t1 MTR_1g089005 40.336 119 64 2 24 136 15 132 9.88e-21 87.8
MS.gene03140.t1 MTR_1g098320 44.681 94 50 1 244 337 45 136 1.45e-20 87.0
MS.gene03140.t1 MTR_3g462850 35.862 145 84 4 188 326 9 150 2.06e-20 86.7
MS.gene03140.t1 MTR_4g114220 48.750 80 31 2 51 130 30 99 2.96e-18 80.5
MS.gene03140.t1 MTR_6g048160 53.521 71 29 2 63 133 22 88 5.84e-18 78.2
MS.gene03140.t1 MTR_5g074770 40.860 93 54 1 232 324 17 108 2.53e-16 74.3
MS.gene03140.t1 MTR_4g031040 30.286 175 78 3 83 257 1 131 1.62e-15 72.8
MS.gene03140.t1 MTR_4g012865 47.059 68 36 0 28 95 81 148 6.86e-13 65.9
MS.gene03140.t1 MTR_7g086810 30.894 123 59 1 20 142 2 98 1.39e-12 67.0
MS.gene03140.t1 MTR_7g086785 36.842 76 47 1 67 142 1 75 7.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03140.t1 AT5G06730 56.024 332 146 0 6 337 15 346 3.56e-133 384
MS.gene03140.t1 AT5G06720 57.321 321 137 0 6 326 14 334 1.54e-132 381
MS.gene03140.t1 AT2G38380 55.828 326 141 2 3 325 8 333 6.02e-130 375
MS.gene03140.t1 AT4G08770 55.591 313 137 2 21 331 21 333 4.18e-127 368
MS.gene03140.t1 AT3G32980 57.321 321 133 3 12 328 17 337 1.28e-125 364
MS.gene03140.t1 AT3G49120 56.386 321 136 3 12 328 18 338 1.65e-125 364
MS.gene03140.t1 AT2G38390 54.601 326 145 2 3 325 8 333 3.48e-124 360
MS.gene03140.t1 AT4G08780 53.994 313 142 2 21 331 21 333 6.97e-123 357
MS.gene03140.t1 AT3G49110 55.864 324 138 3 7 328 19 339 1.70e-122 357
MS.gene03140.t1 AT2G18140 50.993 302 147 1 24 325 35 335 8.45e-107 316
MS.gene03140.t1 AT5G19890 50.765 327 152 5 1 325 8 327 9.77e-106 313
MS.gene03140.t1 AT2G18150 50.000 300 149 1 26 325 38 336 1.03e-105 313
MS.gene03140.t1 AT4G36430 47.335 319 166 2 9 326 14 331 1.87e-104 310
MS.gene03140.t1 AT5G66390 47.771 314 162 2 12 325 22 333 6.53e-104 308
MS.gene03140.t1 AT5G19880 50.814 307 148 2 22 325 23 329 2.08e-102 305
MS.gene03140.t1 AT1G44970 50.164 305 152 0 21 325 42 346 2.84e-102 305
MS.gene03140.t1 AT1G49570 48.867 309 153 3 18 323 42 348 1.06e-100 301
MS.gene03140.t1 AT3G50990 47.386 306 160 1 22 327 39 343 1.38e-99 298
MS.gene03140.t1 AT1G14550 48.525 305 149 3 22 325 24 321 2.64e-96 289
MS.gene03140.t1 AT5G05340 47.386 306 150 4 22 325 28 324 7.91e-95 285
MS.gene03140.t1 AT1G14540 46.273 322 166 2 4 325 1 315 2.69e-92 278
MS.gene03140.t1 AT1G68850 46.945 311 151 8 24 325 30 335 9.03e-92 278
MS.gene03140.t1 AT4G16270 45.485 299 158 4 28 325 54 348 9.69e-91 275
MS.gene03140.t1 AT2G35380 48.344 302 152 3 28 325 34 335 2.52e-89 271
MS.gene03140.t1 AT5G58390 46.462 325 160 6 6 325 1 316 3.72e-89 270
MS.gene03140.t1 AT5G58400 44.062 320 167 5 9 325 15 325 7.65e-86 262
MS.gene03140.t1 AT3G03670 42.902 317 178 2 9 325 8 321 3.29e-85 260
MS.gene03140.t1 AT2G22420 42.020 307 163 5 24 325 23 319 3.04e-81 250
MS.gene03140.t1 AT1G71695 44.156 308 160 6 24 328 44 342 2.68e-80 249
MS.gene03140.t1 AT2G41480 41.994 331 179 7 1 325 5 328 4.09e-80 248
MS.gene03140.t1 AT5G51890 38.318 321 191 5 6 325 8 322 6.33e-79 244
MS.gene03140.t1 AT5G17820 41.311 305 167 5 21 325 21 313 2.83e-78 242
MS.gene03140.t1 AT4G11290 41.033 329 184 6 4 325 1 326 4.13e-78 242
MS.gene03140.t1 AT5G64120 42.202 327 170 8 9 325 11 328 5.81e-78 242
MS.gene03140.t1 AT3G01190 41.121 321 181 6 6 325 8 321 9.59e-78 241
MS.gene03140.t1 AT5G15180 40.984 305 170 5 24 325 32 329 1.95e-77 241
MS.gene03140.t1 AT5G17820 41.176 306 168 5 20 325 73 366 8.90e-77 240
MS.gene03140.t1 AT5G42180 41.722 302 167 6 24 324 23 316 7.08e-76 236
MS.gene03140.t1 AT4G25980 41.066 319 177 5 12 325 14 326 7.33e-76 236
MS.gene03140.t1 AT1G05260 40.062 322 187 5 7 326 9 326 2.80e-75 235
MS.gene03140.t1 AT4G37530 42.345 307 172 3 22 325 25 329 4.32e-74 232
MS.gene03140.t1 AT5G39580 44.000 300 157 7 28 325 29 319 1.02e-73 231
MS.gene03140.t1 AT3G21770 40.777 309 177 5 16 322 21 325 1.05e-73 231
MS.gene03140.t1 AT4G33420 41.325 317 167 7 15 325 22 325 1.59e-73 231
MS.gene03140.t1 AT4G33420 41.325 317 167 7 15 325 69 372 6.41e-73 231
MS.gene03140.t1 AT2G18980 40.810 321 179 5 9 325 10 323 8.73e-73 229
MS.gene03140.t1 AT1G30870 40.523 306 169 6 24 326 51 346 4.87e-70 222
MS.gene03140.t1 AT1G05240 39.286 308 173 5 24 325 26 325 8.85e-70 221
MS.gene03140.t1 AT1G05250 39.286 308 173 5 24 325 26 325 8.85e-70 221
MS.gene03140.t1 AT4G30170 39.610 308 175 5 22 325 25 325 8.98e-69 218
MS.gene03140.t1 AT4G33870 35.629 334 177 5 24 322 68 398 6.56e-68 219
MS.gene03140.t1 AT4G31760 38.462 325 181 5 13 325 9 326 7.98e-68 216
MS.gene03140.t1 AT5G64100 42.053 302 160 7 28 325 41 331 1.07e-67 216
MS.gene03140.t1 AT5G14130 39.032 310 174 7 22 325 30 330 2.31e-67 215
MS.gene03140.t1 AT5G14130 39.032 310 174 7 22 325 71 371 6.10e-67 215
MS.gene03140.t1 AT3G49960 37.461 323 197 3 6 325 9 329 9.10e-67 213
MS.gene03140.t1 AT5G64110 40.864 301 167 5 28 325 38 330 1.05e-66 213
MS.gene03140.t1 AT2G35380 46.964 247 127 3 83 325 1 247 2.11e-66 209
MS.gene03140.t1 AT5G40150 38.462 312 183 4 16 325 24 328 3.58e-66 212
MS.gene03140.t1 AT3G28200 37.987 308 177 5 22 325 19 316 4.24e-66 211
MS.gene03140.t1 AT4G37520 39.088 307 182 3 22 325 25 329 4.28e-66 211
MS.gene03140.t1 AT5G24070 41.404 285 154 6 51 330 64 340 2.45e-65 210
MS.gene03140.t1 AT2G24800 40.260 308 173 5 22 325 29 329 8.61e-65 208
MS.gene03140.t1 AT5G67400 40.584 308 176 5 22 325 25 329 1.01e-64 208
MS.gene03140.t1 AT4G26010 37.658 316 181 6 11 325 9 309 1.15e-64 207
MS.gene03140.t1 AT4G37530 43.922 255 140 2 22 273 25 279 1.57e-64 206
MS.gene03140.t1 AT4G37520 38.762 307 180 4 22 325 25 326 1.70e-64 207
MS.gene03140.t1 AT2G34060 38.636 308 180 6 21 322 39 343 2.05e-64 208
MS.gene03140.t1 AT4G26010 38.050 318 177 7 11 325 37 337 2.83e-64 207
MS.gene03140.t1 AT1G77100 39.938 323 176 8 11 325 7 319 3.82e-64 206
MS.gene03140.t1 AT2G39040 39.228 311 178 7 22 325 44 350 3.76e-63 204
MS.gene03140.t1 AT2G43480 41.429 280 151 6 51 325 64 335 1.28e-62 203
MS.gene03140.t1 AT5G22410 36.129 310 184 7 18 322 22 322 1.81e-60 197
MS.gene03140.t1 AT1G24110 34.528 307 194 5 22 325 20 322 1.71e-59 194
MS.gene03140.t1 AT5G47000 33.754 317 200 5 12 325 21 330 3.13e-59 194
MS.gene03140.t1 AT1G34510 36.392 316 185 6 11 325 9 309 3.19e-59 193
MS.gene03140.t1 AT4G17690 35.738 305 185 5 24 325 26 322 5.79e-57 188
MS.gene03140.t1 AT3G17070 33.131 329 204 7 7 325 17 339 2.73e-53 179
MS.gene03140.t1 AT2G37130 33.121 314 198 5 16 325 22 327 1.99e-49 168
MS.gene03140.t1 AT4G21960 32.047 337 211 6 1 327 1 329 7.85e-48 164
MS.gene03140.t1 AT2G37130 33.444 302 189 5 28 325 3 296 2.20e-47 162
MS.gene03140.t1 AT4G25980 45.604 182 95 3 12 193 59 236 3.34e-47 161
MS.gene03140.t1 AT3G17070 31.786 280 178 7 52 325 4 276 7.70e-40 142
MS.gene03140.t1 AT5G39580 45.614 171 88 3 28 198 29 194 5.91e-39 138
MS.gene03140.t1 AT2G24800 43.023 172 94 1 22 193 29 196 7.49e-35 128
MS.gene03140.t1 AT1G77490 26.022 269 149 11 58 309 106 341 2.01e-15 77.4
MS.gene03140.t1 AT1G77490 26.022 269 149 11 58 309 106 341 2.58e-15 77.0
MS.gene03140.t1 AT3G42570 29.787 141 86 4 53 191 20 149 3.54e-12 63.9

Find 70 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGTTCCCTGTTCCATTT+TGG 0.151832 2.1:+61425550 None:intergenic
AGGGAACAATCTCACTAATT+TGG 0.252401 2.1:-61425538 MS.gene03140:CDS
TAGGGTGTCCATGATTAAAA+TGG 0.263076 2.1:-61425352 MS.gene03140:CDS
AAGTTGATCCAATGAGAAAA+AGG 0.270141 2.1:+61426347 None:intergenic
AATGAGACTGGCACCAATTC+GGG 0.277255 2.1:+61428206 None:intergenic
CCTCTTAATGAGTTTATGTT+TGG 0.284231 2.1:+61427495 None:intergenic
TAGAGTTTGATCTGGATTTC+CGG 0.302334 2.1:+61425611 None:intergenic
CACTTTGAAGTAAGCCTTTG+TGG 0.319319 2.1:+61425463 None:intergenic
AATATGACTCTAAACACAAT+AGG 0.329328 2.1:+61428249 None:intergenic
CGTGAGATATGTCCCCAAAA+TGG 0.335411 2.1:-61425564 MS.gene03140:CDS
CTGGTGATCAAGGGGAAATT+AGG 0.335959 2.1:-61425311 MS.gene03140:CDS
GCCTTTGTGGCTTTGAAGAT+TGG 0.338713 2.1:+61425476 None:intergenic
CATTAAGACTGCACACAAAA+AGG 0.341081 2.1:+61428332 None:intergenic
CATAAACTCATTAAGAGGTT+TGG 0.346112 2.1:-61427490 MS.gene03140:CDS
CAAATTGATTTGGTGTAGTA+AGG 0.382467 2.1:+61425514 None:intergenic
ATGGGTTCCATGAATGTACT+AGG 0.387048 2.1:-61428360 MS.gene03140:CDS
AAAGCTGCATTTCTTGTTCA+AGG 0.391405 2.1:-61426324 MS.gene03140:CDS
CCAAACATAAACTCATTAAG+AGG 0.391730 2.1:-61427495 MS.gene03140:CDS
ATGATTAAAATGGCTAATAT+TGG 0.393103 2.1:-61425342 MS.gene03140:CDS
TCCCTCACTGATCCCCGAAT+TGG 0.403147 2.1:-61428219 MS.gene03140:CDS
GAATTGGTGCCAGTCTCATT+AGG 0.407331 2.1:-61428203 MS.gene03140:CDS
GCTAATATTGGTGTACTAAC+TGG 0.408331 2.1:-61425330 MS.gene03140:CDS
GGCAAATTCCATTGGGAAGA+AGG 0.414683 2.1:-61426419 MS.gene03140:CDS
AATTTGTTGTCAAATTGATT+TGG 0.417521 2.1:+61425504 None:intergenic
TAATGAGACTGGCACCAATT+CGG 0.418061 2.1:+61428205 None:intergenic
ATATGTCCCCAAAATGGAAC+AGG 0.420463 2.1:-61425558 MS.gene03140:CDS
TGTCCAGGTGCTCATACGTT+TGG 0.426594 2.1:-61425684 MS.gene03140:intron
GGTATAGAAATGGACATGTT+TGG 0.432530 2.1:+61428271 None:intergenic
GTTGTGTTTAGAGTTTGATC+TGG 0.433592 2.1:+61425603 None:intergenic
GGCCACCCCTAGTACATTCA+TGG 0.444356 2.1:+61428353 None:intergenic
AACACAATAGGGTATAGAAA+TGG 0.446200 2.1:+61428261 None:intergenic
ATGGCAATAGTATCTGCATT+AGG 0.448956 2.1:+61425420 None:intergenic
ATATGACTCTAAACACAATA+GGG 0.454551 2.1:+61428250 None:intergenic
GGTGTACTAACTGGTGATCA+AGG 0.458052 2.1:-61425321 MS.gene03140:CDS
ATACTTGAACAAAGCAATCA+TGG 0.458644 2.1:+61428172 None:intergenic
GCAGATTCCTCTGCATTATC+CGG 0.462932 2.1:-61425267 MS.gene03140:CDS
CCCTCATGGCAAATTCCATT+GGG 0.466184 2.1:-61426426 MS.gene03140:CDS
TGTGCAGTCTTAATGCATGC+TGG 0.471905 2.1:-61428324 MS.gene03140:CDS
TCCCTCATGGCAAATTCCAT+TGG 0.478606 2.1:-61426427 MS.gene03140:CDS
AGCTCAAGTAGCTTCTGTTC+TGG 0.481365 2.1:-61427388 MS.gene03140:intron
AATTCTCAAAGAAGAGAGCT+TGG 0.499261 2.1:+61425376 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.1:-61426291 MS.gene03140:intron
CCCAATGGAATTTGCCATGA+GGG 0.510090 2.1:+61426426 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.1:-61428244 MS.gene03140:CDS
CATGTTTGGCTGTAAAATGA+AGG 0.525454 2.1:+61428285 None:intergenic
TTATACAATTTCAATAGCAC+CGG 0.526663 2.1:-61425630 MS.gene03140:CDS
GTGTACTAACTGGTGATCAA+GGG 0.539547 2.1:-61425320 MS.gene03140:CDS
TTGGTTTATGAACAGGGAGG+AGG 0.539593 2.1:-61426450 MS.gene03140:intron
AAACTATCCCTTCTTCCCAA+TGG 0.540488 2.1:+61426411 None:intergenic
AAGCTGCATTTCTTGTTCAA+GGG 0.544571 2.1:-61426323 MS.gene03140:CDS
TTCCATGAATGTACTAGGGG+TGG 0.544977 2.1:-61428355 MS.gene03140:CDS
TGGGTTCCATGAATGTACTA+GGG 0.550297 2.1:-61428359 MS.gene03140:CDS
GCAAATTCCATTGGGAAGAA+GGG 0.554150 2.1:-61426418 MS.gene03140:CDS
GAAATGAAGCCTAATGAGAC+TGG 0.563857 2.1:+61428194 None:intergenic
GTGCAGTCTTAATGCATGCT+GGG 0.565360 2.1:-61428323 MS.gene03140:CDS
ACCAATTCGGGGATCAGTGA+GGG 0.574096 2.1:+61428218 None:intergenic
TGTTTGTGACAGGGTTGCGA+TGG 0.579435 2.1:-61427570 MS.gene03140:intron
TCAGCACAAGAAACAGTGGC+TGG 0.593952 2.1:+61427426 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.1:-61426440 MS.gene03140:intron
TCCAATCTTCAAAGCCACAA+AGG 0.630443 2.1:-61425477 MS.gene03140:CDS
ATGAGACTGGCACCAATTCG+GGG 0.640565 2.1:+61428207 None:intergenic
ACTACTAAAGCTATTAACAA+TGG 0.641189 2.1:+61425401 None:intergenic
TGTACTAACTGGTGATCAAG+GGG 0.649642 2.1:-61425319 MS.gene03140:CDS
GATTCCTCTGCATTATCCGG+TGG 0.650928 2.1:-61425264 MS.gene03140:CDS
AATATCAGCACAAGAAACAG+TGG 0.657026 2.1:+61427422 None:intergenic
CACCAATTCGGGGATCAGTG+AGG 0.657501 2.1:+61428217 None:intergenic
TGCACCACCGGATAATGCAG+AGG 0.673498 2.1:+61425260 None:intergenic
GGGTTCCATGAATGTACTAG+GGG 0.674090 2.1:-61428358 MS.gene03140:CDS
TCCCAATGGAATTTGCCATG+AGG 0.679713 2.1:+61426425 None:intergenic
TATGTCCCCAAAATGGAACA+GGG 0.733433 2.1:-61425557 MS.gene03140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTTTATTAAACTTTAT+TGG + chr2.1:61427697-61427716 None:intergenic 10.0%
!!! ACTAATATAAATAATTTGTT+TGG - chr2.1:61426736-61426755 MS.gene03140:intron 10.0%
!!! ATTATTTTTAGTATATATGT+AGG + chr2.1:61426609-61426628 None:intergenic 10.0%
!!! TTTTTTATTTTAAAAATAGC+AGG - chr2.1:61426306-61426325 MS.gene03140:CDS 10.0%
!! TAAACTAGTAACTAATATAT+TGG - chr2.1:61427121-61427140 MS.gene03140:intron 15.0%
!! TATACAAAAGTTAAAATTTC+AGG + chr2.1:61427886-61427905 None:intergenic 15.0%
!! TTAATCATAACTGATATAAA+AGG + chr2.1:61427573-61427592 None:intergenic 15.0%
!!! AGTTTTATAGTGATAATTTT+GGG - chr2.1:61426482-61426501 MS.gene03140:intron 15.0%
!!! TAGTTTTATAGTGATAATTT+TGG - chr2.1:61426481-61426500 MS.gene03140:intron 15.0%
!! AATAACCAAAATTATTGTAG+TGG + chr2.1:61425555-61425574 None:intergenic 20.0%
!! ACTAAAAATAATGAATGTCT+TGG - chr2.1:61426617-61426636 MS.gene03140:intron 20.0%
!! AGAAATCATGATCTATATAT+AGG + chr2.1:61425485-61425504 None:intergenic 20.0%
!! AGAATACAGAAAAATAAAAG+TGG + chr2.1:61427069-61427088 None:intergenic 20.0%
!! ATGATTAAAATGGCTAATAT+TGG - chr2.1:61428248-61428267 MS.gene03140:CDS 20.0%
!! GTAATCAATGAATTAATATC+TGG - chr2.1:61426334-61426353 MS.gene03140:CDS 20.0%
!! TAATTAATGTTCTTAGAGAA+TGG + chr2.1:61426367-61426386 None:intergenic 20.0%
!! TTACCAACAATTTCATAAAA+AGG - chr2.1:61427350-61427369 MS.gene03140:intron 20.0%
!!! AAATTAAAGTGGATTGTATT+AGG + chr2.1:61425525-61425544 None:intergenic 20.0%
!!! AATATATTGGTTTATGAACA+GGG - chr2.1:61427134-61427153 MS.gene03140:intron 20.0%
!!! AATATTAGCCATTTTAATCA+TGG + chr2.1:61428249-61428268 None:intergenic 20.0%
!!! AATTTGTTGTCAAATTGATT+TGG + chr2.1:61428089-61428108 None:intergenic 20.0%
!!! ATTTTATTGTTTTCTTTTGC+AGG - chr2.1:61426449-61426468 MS.gene03140:intron 20.0%
!!! CACATAATAACTTTTTACAT+TGG - chr2.1:61427422-61427441 MS.gene03140:CDS 20.0%
!!! TAATATATTGGTTTATGAAC+AGG - chr2.1:61427133-61427152 MS.gene03140:intron 20.0%
!!! TATTAGTTACTAGTTTAAGA+TGG + chr2.1:61427118-61427137 None:intergenic 20.0%
!!! TTTTATCTATATAACTAGCT+AGG + chr2.1:61426266-61426285 None:intergenic 20.0%
!!! TTTTATTGTTTTCTTTTGCA+GGG - chr2.1:61426450-61426469 MS.gene03140:intron 20.0%
!!! TTTTTGTATGTTTTGTTTTC+AGG + chr2.1:61426696-61426715 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGACGAAC+AGG - chr2.1:61426570-61426589 MS.gene03140:intron 20.0%
! AATATGACTCTAAACACAAT+AGG + chr2.1:61425344-61425363 None:intergenic 25.0%
! AATTTAAGTCTTAACTTTCG+TGG + chr2.1:61427022-61427041 None:intergenic 25.0%
! ACTACTAAAGCTATTAACAA+TGG + chr2.1:61428192-61428211 None:intergenic 25.0%
! ATAACCGTTGTACAAAAAAT+CGG + chr2.1:61427660-61427679 None:intergenic 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.1:61425343-61425362 None:intergenic 25.0%
! TAAGACTTAAACCAATAGTA+AGG + chr2.1:61426971-61426990 None:intergenic 25.0%
! TACAATAGAAGAATCTACAT+CGG + chr2.1:61427479-61427498 None:intergenic 25.0%
! TTATACAATTTCAATAGCAC+CGG - chr2.1:61427960-61427979 MS.gene03140:intron 25.0%
!! AAGTTTTTATCTACTTAACG+TGG + chr2.1:61426883-61426902 None:intergenic 25.0%
!! AGTCCTTTTTATGAAATTGT+TGG + chr2.1:61427356-61427375 None:intergenic 25.0%
!! AGTTTTTATCTACTTAACGT+GGG + chr2.1:61426882-61426901 None:intergenic 25.0%
!! ATGAACCACTACAATAATTT+TGG - chr2.1:61425547-61425566 MS.gene03140:CDS 25.0%
!! ATTGTGTTACTGAAAAAACA+TGG - chr2.1:61425883-61425902 MS.gene03140:intron 25.0%
!! CATAGATTTTTGTCTTTTAG+TGG - chr2.1:61425952-61425971 MS.gene03140:intron 25.0%
!! TACAAAAAATCGGTTTACAT+TGG + chr2.1:61427650-61427669 None:intergenic 25.0%
!! TATATAGGAAGAGCTTTATA+TGG + chr2.1:61425470-61425489 None:intergenic 25.0%
!!! ATTAGCTTTAGTCAAACAAA+AGG + chr2.1:61426793-61426812 None:intergenic 25.0%
!!! TAAACCGATTTTTTGTACAA+CGG - chr2.1:61427653-61427672 MS.gene03140:intron 25.0%
!!! TCTCTTCTTTGAGAATTTTA+GGG - chr2.1:61428220-61428239 MS.gene03140:CDS 25.0%
!!! TTTAACTTTTGTATATGTCC+AGG - chr2.1:61427891-61427910 MS.gene03140:intron 25.0%
AACACAATAGGGTATAGAAA+TGG + chr2.1:61425332-61425351 None:intergenic 30.0%
AACGTCAATAAAGTTACTGA+CGG - chr2.1:61425668-61425687 MS.gene03140:CDS 30.0%
ACATGCATAAACAACAACTT+TGG + chr2.1:61426003-61426022 None:intergenic 30.0%
AGTTGATCCAATGAGAAAAA+GGG + chr2.1:61427245-61427264 None:intergenic 30.0%
ATACTTGAACAAAGCAATCA+TGG + chr2.1:61425421-61425440 None:intergenic 30.0%
ATCTGATGAAGAATTACTGA+GGG - chr2.1:61425718-61425737 MS.gene03140:intron 30.0%
ATGATACTTGAAACTACTAC+TGG - chr2.1:61426414-61426433 MS.gene03140:CDS 30.0%
CATAAACTCATTAAGAGGTT+TGG - chr2.1:61426100-61426119 MS.gene03140:intron 30.0%
CCAAACATAAACTCATTAAG+AGG - chr2.1:61426095-61426114 MS.gene03140:intron 30.0%
CCTCTTAATGAGTTTATGTT+TGG + chr2.1:61426098-61426117 None:intergenic 30.0%
GACATATAAGTCTTAACTGT+TGG + chr2.1:61427047-61427066 None:intergenic 30.0%
GTGGTTCATTCAAATTAAAG+TGG + chr2.1:61425536-61425555 None:intergenic 30.0%
GTTCAACTCAAATACTAATC+CGG + chr2.1:61426945-61426964 None:intergenic 30.0%
TGCTCACTAAAATAATTGAC+AGG - chr2.1:61426538-61426557 MS.gene03140:intron 30.0%
TTCATGTGCACTACATTAAT+TGG + chr2.1:61425823-61425842 None:intergenic 30.0%
TTGGTTTAAGTCTTAACAGT+TGG - chr2.1:61426976-61426995 MS.gene03140:intron 30.0%
TTTCCTTCAGTAATTACTGA+CGG - chr2.1:61425744-61425763 MS.gene03140:intron 30.0%
! AAATCGGTTTACATTGGTTA+AGG + chr2.1:61427644-61427663 None:intergenic 30.0%
! AAGTTGATCCAATGAGAAAA+AGG + chr2.1:61427246-61427265 None:intergenic 30.0%
! AATACACATTACTGGCTAAT+CGG - chr2.1:61425618-61425637 MS.gene03140:CDS 30.0%
! CTTTCAATTTTCCACAATCA+AGG + chr2.1:61427547-61427566 None:intergenic 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.1:61425346-61425365 MS.gene03140:CDS 30.0%
!! CAAATTGATTTGGTGTAGTA+AGG + chr2.1:61428079-61428098 None:intergenic 30.0%
!! CTCTCTTCTTTGAGAATTTT+AGG - chr2.1:61428219-61428238 MS.gene03140:CDS 30.0%
!! GCTAATGTTGAACTTGTTAA+AGG - chr2.1:61426807-61426826 MS.gene03140:intron 30.0%
!!! TTCTTGTTTTACGATACTGA+CGG + chr2.1:61425794-61425813 None:intergenic 30.0%
AAAGCTGCATTTCTTGTTCA+AGG - chr2.1:61427266-61427285 MS.gene03140:intron 35.0%
AAGCTGCATTTCTTGTTCAA+GGG - chr2.1:61427267-61427286 MS.gene03140:intron 35.0%
AATATCAGCACAAGAAACAG+TGG + chr2.1:61426171-61426190 None:intergenic 35.0%
AATTCTCAAAGAAGAGAGCT+TGG + chr2.1:61428217-61428236 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.1:61427299-61427318 MS.gene03140:intron 35.0%
AGGGAACAATCTCACTAATT+TGG - chr2.1:61428052-61428071 MS.gene03140:intron 35.0%
AGTTGAACTCTCCTTACTAT+TGG - chr2.1:61426957-61426976 MS.gene03140:intron 35.0%
ATGGCAATAGTATCTGCATT+AGG + chr2.1:61428173-61428192 None:intergenic 35.0%
ATTCCGTCAGTAATTACTGA+AGG + chr2.1:61425750-61425769 None:intergenic 35.0%
CAAAAGGTTCAACATTAGCT+AGG + chr2.1:61426777-61426796 None:intergenic 35.0%
CATGTTTGGCTGTAAAATGA+AGG + chr2.1:61425308-61425327 None:intergenic 35.0%
CATTAAGACTGCACACAAAA+AGG + chr2.1:61425261-61425280 None:intergenic 35.0%
CCAGTAATGTGTATTACTGA+GGG + chr2.1:61425613-61425632 None:intergenic 35.0%
GATCTGATGAAGAATTACTG+AGG - chr2.1:61425717-61425736 MS.gene03140:intron 35.0%
GCTAATATTGGTGTACTAAC+TGG - chr2.1:61428260-61428279 MS.gene03140:CDS 35.0%
GGTATAGAAATGGACATGTT+TGG + chr2.1:61425322-61425341 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.1:61426011-61426030 MS.gene03140:intron 35.0%
TAGAGTTTGATCTGGATTTC+CGG + chr2.1:61427982-61428001 None:intergenic 35.0%
TCAAATACTAATCCGGTAGA+TGG + chr2.1:61426938-61426957 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.1:61426010-61426029 MS.gene03140:intron 35.0%
TTCAGTAATTACTGACGGAA+TGG - chr2.1:61425749-61425768 MS.gene03140:intron 35.0%
TTGATCTGATCAAAGCCAAT+GGG + chr2.1:61426655-61426674 None:intergenic 35.0%
! ATTGTTCCCTGTTCCATTTT+GGG + chr2.1:61428042-61428061 None:intergenic 35.0%
! GTTGTGTTTAGAGTTTGATC+TGG + chr2.1:61427990-61428009 None:intergenic 35.0%
! TAGGGTGTCCATGATTAAAA+TGG - chr2.1:61428238-61428257 MS.gene03140:CDS 35.0%
! TTCATCTTTTAATGCACCAC+CGG + chr2.1:61428345-61428364 None:intergenic 35.0%
!! AAAGTGGATTGTATTAGGTC+TGG + chr2.1:61425520-61425539 None:intergenic 35.0%
!! AGTGATAATTTTGGGTAACG+AGG - chr2.1:61426490-61426509 MS.gene03140:intron 35.0%
!! ATATTGGTTTATGAACAGGG+AGG - chr2.1:61427137-61427156 MS.gene03140:intron 35.0%
!!! ACTGACGGATTTTTCTATAC+CGG + chr2.1:61425779-61425798 None:intergenic 35.0%
!!! TGGAAGGTTTTGATTTGCAA+GGG + chr2.1:61427219-61427238 None:intergenic 35.0%
AAACTATCCCTTCTTCCCAA+TGG + chr2.1:61427182-61427201 None:intergenic 40.0%
ATATGTCCCCAAAATGGAAC+AGG - chr2.1:61428032-61428051 MS.gene03140:intron 40.0%
ATCACTCACTCCATTACTGA+GGG + chr2.1:61425700-61425719 None:intergenic 40.0%
ATGGGTTCCATGAATGTACT+AGG - chr2.1:61425230-61425249 MS.gene03140:CDS 40.0%
CCCTCAGTAATACACATTAC+TGG - chr2.1:61425610-61425629 MS.gene03140:CDS 40.0%
GAAATGAAGCCTAATGAGAC+TGG + chr2.1:61425399-61425418 None:intergenic 40.0%
GCAAATTCCATTGGGAAGAA+GGG - chr2.1:61427172-61427191 MS.gene03140:intron 40.0%
GCCAGTAATGTGTATTACTG+AGG + chr2.1:61425614-61425633 None:intergenic 40.0%
GTGTACTAACTGGTGATCAA+GGG - chr2.1:61428270-61428289 MS.gene03140:CDS 40.0%
GTTGATCTGATCAAAGCCAA+TGG + chr2.1:61426656-61426675 None:intergenic 40.0%
TAATGAGACTGGCACCAATT+CGG + chr2.1:61425388-61425407 None:intergenic 40.0%
TATGTCCCCAAAATGGAACA+GGG - chr2.1:61428033-61428052 MS.gene03140:intron 40.0%
TCCAATCTTCAAAGCCACAA+AGG - chr2.1:61428113-61428132 MS.gene03140:intron 40.0%
TGATCTGATCAAAGCCAATG+GGG + chr2.1:61426654-61426673 None:intergenic 40.0%
TGGCTAAAATTGAACCCCAT+TGG - chr2.1:61426637-61426656 MS.gene03140:intron 40.0%
TGGGTTCCATGAATGTACTA+GGG - chr2.1:61425231-61425250 MS.gene03140:CDS 40.0%
TGTACTAACTGGTGATCAAG+GGG - chr2.1:61428271-61428290 MS.gene03140:CDS 40.0%
! ACGGAATTTTCCCTCAGTAA+TGG - chr2.1:61425687-61425706 MS.gene03140:intron 40.0%
! GATTGTTCCCTGTTCCATTT+TGG + chr2.1:61428043-61428062 None:intergenic 40.0%
! GGCATTTTTCACCTTGATTG+TGG - chr2.1:61427533-61427552 MS.gene03140:CDS 40.0%
! TTGTTCCCTGTTCCATTTTG+GGG + chr2.1:61428041-61428060 None:intergenic 40.0%
!! AACTTGTTAAAGGAGCGTCT+AGG - chr2.1:61426817-61426836 MS.gene03140:intron 40.0%
!! CACTTTGAAGTAAGCCTTTG+TGG + chr2.1:61428130-61428149 None:intergenic 40.0%
!!! CTGGAAGGTTTTGATTTGCA+AGG + chr2.1:61427220-61427239 None:intergenic 40.0%
AATGAGACTGGCACCAATTC+GGG + chr2.1:61425387-61425406 None:intergenic 45.0%
AGCTCAAGTAGCTTCTGTTC+TGG - chr2.1:61426202-61426221 MS.gene03140:intron 45.0%
ATCAAGGTGAAAAATGCCCC+AGG + chr2.1:61427531-61427550 None:intergenic 45.0%
CCCAATGGAATTTGCCATGA+GGG + chr2.1:61427167-61427186 None:intergenic 45.0%
CCCTCATGGCAAATTCCATT+GGG - chr2.1:61427164-61427183 MS.gene03140:intron 45.0%
CGTGAGATATGTCCCCAAAA+TGG - chr2.1:61428026-61428045 MS.gene03140:intron 45.0%
CTGGTGATCAAGGGGAAATT+AGG - chr2.1:61428279-61428298 MS.gene03140:CDS 45.0%
GATCACTCACTCCATTACTG+AGG + chr2.1:61425701-61425720 None:intergenic 45.0%
GCAGATTCCTCTGCATTATC+CGG - chr2.1:61428323-61428342 MS.gene03140:CDS 45.0%
GGCAAATTCCATTGGGAAGA+AGG - chr2.1:61427171-61427190 MS.gene03140:intron 45.0%
GGGTTCCATGAATGTACTAG+GGG - chr2.1:61425232-61425251 MS.gene03140:CDS 45.0%
GGTGTACTAACTGGTGATCA+AGG - chr2.1:61428269-61428288 MS.gene03140:CDS 45.0%
GTGCAGTCTTAATGCATGCT+GGG - chr2.1:61425267-61425286 MS.gene03140:CDS 45.0%
TAAACACTTCTTGTCCCCCT+GGG - chr2.1:61427511-61427530 MS.gene03140:CDS 45.0%
TCAAGGTGAAAAATGCCCCA+GGG + chr2.1:61427530-61427549 None:intergenic 45.0%
TCCCAATGGAATTTGCCATG+AGG + chr2.1:61427168-61427187 None:intergenic 45.0%
TCCCTCATGGCAAATTCCAT+TGG - chr2.1:61427163-61427182 MS.gene03140:intron 45.0%
TGGATATGTCGTACGTGAGA+AGG + chr2.1:61427098-61427117 None:intergenic 45.0%
TGTGCAGTCTTAATGCATGC+TGG - chr2.1:61425266-61425285 MS.gene03140:CDS 45.0%
TTAAACACTTCTTGTCCCCC+TGG - chr2.1:61427510-61427529 MS.gene03140:CDS 45.0%
TTCCATGAATGTACTAGGGG+TGG - chr2.1:61425235-61425254 MS.gene03140:CDS 45.0%
TTGGTTTATGAACAGGGAGG+AGG - chr2.1:61427140-61427159 MS.gene03140:intron 45.0%
! TCCAATGAGAAAAAGGGTGC+TGG + chr2.1:61427239-61427258 None:intergenic 45.0%
! TCCAGCACCCTTTTTCTCAT+TGG - chr2.1:61427235-61427254 MS.gene03140:intron 45.0%
!! AAAGGAGCGTCTAGGATTCA+TGG - chr2.1:61426825-61426844 MS.gene03140:intron 45.0%
!! ATGAGAAAAAGGGTGCTGGA+AGG + chr2.1:61427235-61427254 None:intergenic 45.0%
!! GAATTGGTGCCAGTCTCATT+AGG - chr2.1:61425387-61425406 MS.gene03140:CDS 45.0%
!! GACGGATTTTTCTATACCGG+CGG + chr2.1:61425776-61425795 None:intergenic 45.0%
!! GCCTTTGTGGCTTTGAAGAT+TGG + chr2.1:61428117-61428136 None:intergenic 45.0%
!!! GGTTTTGATTTGCAAGGGCT+TGG + chr2.1:61427214-61427233 None:intergenic 45.0%
AAACACTTCTTGTCCCCCTG+GGG - chr2.1:61427512-61427531 MS.gene03140:CDS 50.0%
AAGGTGAAAAATGCCCCAGG+GGG + chr2.1:61427528-61427547 None:intergenic 50.0%
ACCAATTCGGGGATCAGTGA+GGG + chr2.1:61425375-61425394 None:intergenic 50.0%
ATGAGACTGGCACCAATTCG+GGG + chr2.1:61425386-61425405 None:intergenic 50.0%
CAAGGTGAAAAATGCCCCAG+GGG + chr2.1:61427529-61427548 None:intergenic 50.0%
CGGTAGATGGAAGAGTCTCA+CGG + chr2.1:61426925-61426944 None:intergenic 50.0%
CGTGAGACTCTTCCATCTAC+CGG - chr2.1:61426923-61426942 MS.gene03140:intron 50.0%
CTTCCAAACGTATGAGCACC+TGG + chr2.1:61427912-61427931 None:intergenic 50.0%
GATTCCTCTGCATTATCCGG+TGG - chr2.1:61428326-61428345 MS.gene03140:CDS 50.0%
TCAGCACAAGAAACAGTGGC+TGG + chr2.1:61426167-61426186 None:intergenic 50.0%
TGTCCAGGTGCTCATACGTT+TGG - chr2.1:61427906-61427925 MS.gene03140:intron 50.0%
TGTTTGTGACAGGGTTGCGA+TGG - chr2.1:61426020-61426039 MS.gene03140:intron 50.0%
CACCAATTCGGGGATCAGTG+AGG + chr2.1:61425376-61425395 None:intergenic 55.0%
GGCCACCCCTAGTACATTCA+TGG + chr2.1:61425240-61425259 None:intergenic 55.0%
TCCCTCACTGATCCCCGAAT+TGG - chr2.1:61425371-61425390 MS.gene03140:CDS 55.0%
TGCACCACCGGATAATGCAG+AGG + chr2.1:61428333-61428352 None:intergenic 55.0%
TTACTGACGGAATGGTCCGC+CGG - chr2.1:61425757-61425776 MS.gene03140:intron 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.1:61427150-61427169 MS.gene03140:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 61425230 61428382 61425230 ID=MS.gene03140
chr2.1 mRNA 61425230 61428382 61425230 ID=MS.gene03140.t1;Parent=MS.gene03140
chr2.1 exon 61428176 61428382 61428176 ID=MS.gene03140.t1.exon1;Parent=MS.gene03140.t1
chr2.1 CDS 61428176 61428382 61428176 ID=cds.MS.gene03140.t1;Parent=MS.gene03140.t1
chr2.1 exon 61427389 61427580 61427389 ID=MS.gene03140.t1.exon2;Parent=MS.gene03140.t1
chr2.1 CDS 61427389 61427580 61427389 ID=cds.MS.gene03140.t1;Parent=MS.gene03140.t1
chr2.1 exon 61426292 61426457 61426292 ID=MS.gene03140.t1.exon3;Parent=MS.gene03140.t1
chr2.1 CDS 61426292 61426457 61426292 ID=cds.MS.gene03140.t1;Parent=MS.gene03140.t1
chr2.1 exon 61425230 61425699 61425230 ID=MS.gene03140.t1.exon4;Parent=MS.gene03140.t1
chr2.1 CDS 61425230 61425699 61425230 ID=cds.MS.gene03140.t1;Parent=MS.gene03140.t1
Gene Sequence

>MS.gene03140

ATGGGTTCCATGAATGTACTAGGGGTGGCCTTTTTGTGTGCAGTCTTAATGCATGCTGGGTATGCTCAGCTTAATCCTTCATTTTACAGCCAAACATGTCCATTTCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATTGGTGCCAGTCTCATTAGGCTTCATTTCCATGATTGCTTTGTTCAAGTATGTTATTGTTAATTACTTTTTGTTCATCCATATAAAGCTCTTCCTATATATAGATCATGATTTCTAATTTTCTTATACCAGACCTAATACAATCCACTTTAATTTGAATGAACCACTACAATAATTTTGGTTATTATTGACGAAATTAATCTCTCAGTAATGAATCAAATCCCTCAGTAATACACATTACTGGCTAATCGGTGACAAAAAAATTCTCTCAGTAGTACTAACGTCAATAAAGTTACTGACGGAATTTTCCCTCAGTAATGGAGTGAGTGATCTGATGAAGAATTACTGAGGGATTTTTCCTTCAGTAATTACTGACGGAATGGTCCGCCGGTATAGAAAAATCCGTCAGTATCGTAAAACAAGAAATTCAACCAATTAATGTAGTGCACATGAACACTACAATGTAAATTTTTGTTTTTAGTTAAAATTTTAAAATTGTGTTACTGAAAAAACATGGTGTTGAAAAAATTTGTAACAAAGATCTTTCTTTAAAGTAGTGTTTGCATAGATTTTTGTCTTTTAGTGGTGAAGACACAAATGAAAATCTTATACCAAAGTTGTTGTTTATGCATGTTTGTGACAGGGTTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACATAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAAATGAATGTCCAGCCACTGTTTCTTGTGCTGATATTCTTACTATTGCAGCTCAAGTAGCTTCTGTTCTGGTATGTTTTATCATTAATTTCATCAACTTTTTTTAATTACCTAGCTAGTTATATAGATAAAATAATTAAAAATATTTAATTTTTTTTTATTTTAAAAATAGCAGGAGCTAGTAATCAATGAATTAATATCTGGAAAATTTCCATTCTCTAAGAACATTAATTAATGTATATAGTTAATTATCAATCATACATGATACTTGAAACTACTACTGGCAATATGAAATAATTTTATTGTTTTCTTTTGCAGGGTGAATTTTTAGTTTTATAGTGATAATTTTGGGTAACGAGGAATAGTTTGACTAATTAATCTATTTTGCTCACTAAAATAATTGACAGGATCTCAAATTTTTTTTTTTTTTGACGAACAGGATCTCAACTTGATCCTACATATATACTAAAAATAATGAATGTCTTGGCTAAAATTGAACCCCATTGGCTTTGATCAGATCAACAAATGAGCAAAAGTTGACCTGAAAACAAAACATACAAAAAAGAAGTATATTTGATCATCAACTAATATAAATAATTTGTTTGGACTCTAATAATCACGCCTAGCTAATGTTGAACCTTTTGTTTGACTAAAGCTAATGTTGAACTTGTTAAAGGAGCGTCTAGGATTCATGGTGTTCTAAGTTTAAATATGTTAAGTTAAATTCCCACGTTAAGTAGATAAAAACTTTTAATATGATAAAATTAAGCCGTGAGACTCTTCCATCTACCGGATTAGTATTTGAGTTGAACTCTCCTTACTATTGGTTTAAGTCTTAACAGTTGGTCATTTTATTAAGAATTGAACCACGAAAGTTAAGACTTAAATTAACCAACAGTTAAGACTTATATGTCCACTTTTATTTTTCTGTATTCTTTTTTTCCTTCTCACGTACGACATATCCATCTTAAACTAGTAACTAATATATTGGTTTATGAACAGGGAGGAGGTCCCTCATGGCAAATTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACCAAGCCCTTGCAAATCAAAACCTTCCAGCACCCTTTTTCTCATTGGATCAACTTAAAGCTGCATTTCTTGTTCAAGGGCTCAACACTACAGATTTAGTTACACTCTCAGGTATTGAATATAATCAATTTCATATATACTTACCAACAATTTCATAAAAAGGACTTACACATGACATCAAATCATATATTATTATGTCACAATTCACTATACACATAATAACTTTTTACATTGGTTAAAATTGAATTTTTAAATCGATTTCGCAACCGATGTAGATTCTTCTATTGTAGATTCTTCAAATTAAACACTTCTTGTCCCCCTGGGGCATTTTTCACCTTGATTGTGGAAAATTGAAAGTGACCTTTTATATCAGTTATGATTAAAATCAATGTGAAAAATGTTTTTTTTTTTTTTTTTTTACAATGATTCTGCCTTAACCAATGTAAACCGATTTTTTGTACAACGGTTATAGTAAAAATGTTCACCAATAAAGTTTAATAAAAAGTTCTACACATTATATCAAATCATATAAATAATATCACACATTCACTAAATATTTGCACAATTATCTATACATGTAGTAAGATTTGTTCATACGTCTATGTAAAACTAATTTACATTGTAATAAATATTGTAATTAAACTCGCAGAAATATTATGCAACATATATGTGACCTGAAATTTTAACTTTTGTATATGTCCAGGTGCTCATACGTTTGGAAGAGCTAAGTGTAGCACATTCATTGATCGTTTATACAATTTCAATAGCACCGGAAATCCAGATCAAACTCTAAACACAACTTACTTGCAAACATTGCGTGAGATATGTCCCCAAAATGGAACAGGGAACAATCTCACTAATTTGGACCTTACTACACCAAATCAATTTGACAACAAATTTTACTCCAATCTTCAAAGCCACAAAGGCTTACTTCAAAGTGATCAAGAGCTATTCTCAACTCCTAATGCAGATACTATTGCCATTGTTAATAGCTTTAGTAGTAACCAAGCTCTCTTCTTTGAGAATTTTAGGGTGTCCATGATTAAAATGGCTAATATTGGTGTACTAACTGGTGATCAAGGGGAAATTAGGTTGCAATGTAATTTTATTAATGCAGATTCCTCTGCATTATCCGGTGGTGCATTAAAAGATGAACTTTTAAGCTCATTCTAA
Protein sequence

>MS.gene03140.t1

MGSMNVLGVAFLCAVLMHAGYAQLNPSFYSQTCPFLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNINSLRGLDVVNQIKTAVENECPATVSCADILTIAAQVASVLGGGPSWQIPLGRRDSLTANQALANQNLPAPFFSLDQLKAAFLVQGLNTTDLVTLSGAHTFGRAKCSTFIDRLYNFNSTGNPDQTLNTTYLQTLREICPQNGTGNNLTNLDLTTPNQFDNKFYSNLQSHKGLLQSDQELFSTPNADTIAIVNSFSSNQALFFENFRVSMIKMANIGVLTGDQGEIRLQCNFINADSSALSGGALKDELLSSF