Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02079.t1 | XP_003594487.1 | 95.5 | 355 | 15 | 1 | 1 | 355 | 1 | 354 | 2.10E-190 | 674.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02079.t1 | P24102 | 58.7 | 310 | 127 | 1 | 24 | 332 | 26 | 335 | 3.4e-104 | 379.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02079.t1 | A4UN77 | 95.5 | 355 | 15 | 1 | 1 | 355 | 1 | 354 | 1.5e-190 | 674.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02079.t1 | MTR_2g029750 | 95.493 | 355 | 15 | 1 | 1 | 355 | 1 | 354 | 0.0 | 690 |
MS.gene02079.t1 | MTR_2g029740 | 85.915 | 355 | 50 | 0 | 1 | 355 | 1 | 355 | 0.0 | 630 |
MS.gene02079.t1 | MTR_2g028980 | 76.338 | 355 | 84 | 0 | 1 | 355 | 1 | 355 | 0.0 | 561 |
MS.gene02079.t1 | MTR_2g029800 | 73.239 | 355 | 93 | 1 | 1 | 355 | 1 | 353 | 0.0 | 530 |
MS.gene02079.t1 | MTR_2g029815 | 72.113 | 355 | 96 | 2 | 1 | 355 | 1 | 352 | 0.0 | 516 |
MS.gene02079.t1 | MTR_2g029820 | 69.577 | 355 | 108 | 0 | 1 | 355 | 1 | 355 | 0.0 | 510 |
MS.gene02079.t1 | MTR_2g029830 | 68.994 | 358 | 105 | 3 | 1 | 355 | 1 | 355 | 1.01e-173 | 487 |
MS.gene02079.t1 | MTR_2g029860 | 66.011 | 356 | 117 | 3 | 1 | 355 | 1 | 353 | 4.15e-165 | 465 |
MS.gene02079.t1 | MTR_2g029850 | 64.972 | 354 | 121 | 1 | 1 | 354 | 1 | 351 | 9.72e-163 | 459 |
MS.gene02079.t1 | MTR_2g029910 | 63.944 | 355 | 123 | 2 | 2 | 355 | 3 | 353 | 1.12e-160 | 454 |
MS.gene02079.t1 | MTR_2g029560 | 64.286 | 336 | 115 | 1 | 1 | 336 | 1 | 331 | 6.17e-158 | 446 |
MS.gene02079.t1 | MTR_2g029730 | 64.955 | 331 | 111 | 1 | 6 | 336 | 7 | 332 | 3.49e-154 | 437 |
MS.gene02079.t1 | MTR_2g029830 | 71.378 | 283 | 80 | 1 | 74 | 355 | 5 | 287 | 2.12e-143 | 407 |
MS.gene02079.t1 | MTR_7g093370 | 57.655 | 307 | 129 | 1 | 25 | 330 | 65 | 371 | 5.38e-122 | 356 |
MS.gene02079.t1 | MTR_1g054205 | 55.305 | 311 | 138 | 1 | 21 | 330 | 16 | 326 | 1.08e-118 | 346 |
MS.gene02079.t1 | MTR_5g021060 | 51.325 | 302 | 146 | 1 | 29 | 330 | 30 | 330 | 1.55e-105 | 313 |
MS.gene02079.t1 | MTR_8g076820 | 49.671 | 304 | 152 | 1 | 27 | 330 | 28 | 330 | 1.28e-102 | 305 |
MS.gene02079.t1 | MTR_4g125940 | 50.321 | 312 | 151 | 2 | 21 | 330 | 20 | 329 | 4.81e-102 | 304 |
MS.gene02079.t1 | MTR_7g072510 | 46.769 | 325 | 156 | 3 | 6 | 330 | 5 | 312 | 8.30e-101 | 300 |
MS.gene02079.t1 | MTR_3g094650 | 50.637 | 314 | 144 | 4 | 15 | 326 | 14 | 318 | 6.83e-97 | 291 |
MS.gene02079.t1 | MTR_2g040000 | 48.366 | 306 | 153 | 2 | 28 | 330 | 28 | 331 | 7.11e-97 | 291 |
MS.gene02079.t1 | MTR_5g017860 | 49.836 | 305 | 149 | 3 | 27 | 330 | 25 | 326 | 8.38e-97 | 290 |
MS.gene02079.t1 | MTR_1g022970 | 49.007 | 302 | 154 | 0 | 29 | 330 | 46 | 347 | 1.70e-96 | 290 |
MS.gene02079.t1 | MTR_2g084020 | 47.134 | 314 | 158 | 2 | 17 | 330 | 13 | 318 | 2.14e-96 | 289 |
MS.gene02079.t1 | MTR_4g029170 | 46.855 | 318 | 158 | 4 | 15 | 330 | 13 | 321 | 2.96e-95 | 286 |
MS.gene02079.t1 | MTR_5g017850 | 49.673 | 306 | 148 | 4 | 27 | 330 | 25 | 326 | 5.99e-95 | 286 |
MS.gene02079.t1 | MTR_4g029190 | 50.162 | 309 | 140 | 6 | 26 | 330 | 42 | 340 | 6.77e-95 | 286 |
MS.gene02079.t1 | MTR_7g072480 | 48.525 | 305 | 148 | 2 | 26 | 330 | 21 | 316 | 1.02e-94 | 285 |
MS.gene02079.t1 | MTR_4g122640 | 47.855 | 303 | 153 | 3 | 29 | 330 | 38 | 336 | 2.58e-94 | 285 |
MS.gene02079.t1 | MTR_2g084010 | 47.557 | 307 | 153 | 2 | 24 | 330 | 20 | 318 | 4.63e-94 | 283 |
MS.gene02079.t1 | MTR_2g084110 | 45.963 | 322 | 165 | 2 | 9 | 330 | 5 | 317 | 4.69e-94 | 283 |
MS.gene02079.t1 | MTR_2g084000 | 48.197 | 305 | 150 | 2 | 26 | 330 | 23 | 319 | 1.13e-93 | 282 |
MS.gene02079.t1 | MTR_4g029200 | 47.910 | 311 | 151 | 4 | 21 | 330 | 38 | 338 | 1.15e-93 | 283 |
MS.gene02079.t1 | MTR_5g074970 | 48.193 | 332 | 159 | 4 | 3 | 330 | 4 | 326 | 4.72e-93 | 281 |
MS.gene02079.t1 | MTR_3g072190 | 48.185 | 303 | 148 | 2 | 28 | 330 | 25 | 318 | 8.33e-93 | 280 |
MS.gene02079.t1 | MTR_2g084080 | 45.625 | 320 | 165 | 2 | 11 | 330 | 7 | 317 | 8.80e-93 | 280 |
MS.gene02079.t1 | MTR_4g125940 | 52.000 | 275 | 128 | 2 | 58 | 330 | 2 | 274 | 1.23e-92 | 278 |
MS.gene02079.t1 | MTR_5g083860 | 47.742 | 310 | 149 | 6 | 24 | 330 | 26 | 325 | 2.04e-92 | 279 |
MS.gene02079.t1 | MTR_3g466200 | 46.605 | 324 | 157 | 6 | 10 | 330 | 10 | 320 | 2.66e-92 | 279 |
MS.gene02079.t1 | MTR_4g029180 | 47.176 | 301 | 148 | 4 | 32 | 330 | 30 | 321 | 2.20e-90 | 274 |
MS.gene02079.t1 | MTR_4g083710 | 46.104 | 308 | 156 | 3 | 26 | 330 | 24 | 324 | 3.99e-89 | 271 |
MS.gene02079.t1 | MTR_3g094670 | 46.951 | 328 | 159 | 5 | 1 | 326 | 4 | 318 | 4.40e-89 | 271 |
MS.gene02079.t1 | MTR_3g094630 | 46.988 | 332 | 161 | 5 | 1 | 330 | 4 | 322 | 3.38e-88 | 268 |
MS.gene02079.t1 | MTR_5g049280 | 43.195 | 338 | 183 | 6 | 1 | 330 | 1 | 337 | 3.59e-88 | 269 |
MS.gene02079.t1 | MTR_1g115900 | 43.125 | 320 | 171 | 4 | 13 | 330 | 11 | 321 | 1.32e-87 | 267 |
MS.gene02079.t1 | MTR_4g030890 | 44.013 | 309 | 168 | 3 | 24 | 332 | 95 | 398 | 1.42e-87 | 270 |
MS.gene02079.t1 | MTR_2g084090 | 44.272 | 323 | 170 | 3 | 9 | 330 | 5 | 318 | 1.97e-87 | 266 |
MS.gene02079.t1 | MTR_5g074860 | 46.104 | 308 | 155 | 4 | 25 | 329 | 25 | 324 | 2.61e-86 | 264 |
MS.gene02079.t1 | MTR_4g031140 | 41.987 | 312 | 176 | 3 | 25 | 336 | 24 | 330 | 4.62e-86 | 264 |
MS.gene02079.t1 | MTR_5g014100 | 46.104 | 308 | 152 | 3 | 32 | 330 | 29 | 331 | 7.81e-86 | 263 |
MS.gene02079.t1 | MTR_3g466180 | 45.455 | 308 | 159 | 2 | 23 | 330 | 25 | 323 | 9.92e-86 | 262 |
MS.gene02079.t1 | MTR_2g008710 | 46.885 | 305 | 151 | 5 | 30 | 330 | 28 | 325 | 2.43e-85 | 261 |
MS.gene02079.t1 | MTR_5g074740 | 45.312 | 320 | 164 | 5 | 15 | 331 | 11 | 322 | 5.74e-85 | 260 |
MS.gene02079.t1 | MTR_5g074760 | 45.000 | 320 | 165 | 5 | 15 | 331 | 11 | 322 | 2.30e-84 | 259 |
MS.gene02079.t1 | MTR_4g046713 | 42.598 | 331 | 182 | 4 | 1 | 330 | 3 | 326 | 1.07e-83 | 257 |
MS.gene02079.t1 | MTR_4g074995 | 45.130 | 308 | 146 | 5 | 26 | 330 | 21 | 308 | 9.61e-83 | 254 |
MS.gene02079.t1 | MTR_5g074710 | 44.062 | 320 | 168 | 5 | 15 | 331 | 11 | 322 | 1.46e-81 | 251 |
MS.gene02079.t1 | MTR_3g467600 | 44.375 | 320 | 168 | 3 | 14 | 330 | 12 | 324 | 1.10e-80 | 249 |
MS.gene02079.t1 | MTR_3g092990 | 41.509 | 318 | 183 | 2 | 14 | 330 | 11 | 326 | 1.32e-80 | 249 |
MS.gene02079.t1 | MTR_7g086820 | 42.484 | 306 | 167 | 5 | 27 | 332 | 18 | 314 | 1.78e-80 | 248 |
MS.gene02079.t1 | MTR_2g437770 | 45.485 | 299 | 151 | 6 | 33 | 330 | 54 | 341 | 2.72e-80 | 249 |
MS.gene02079.t1 | MTR_4g074990 | 43.865 | 326 | 152 | 7 | 9 | 330 | 7 | 305 | 2.88e-80 | 248 |
MS.gene02079.t1 | MTR_7g026990 | 42.953 | 298 | 160 | 3 | 33 | 330 | 35 | 322 | 3.92e-80 | 248 |
MS.gene02079.t1 | MTR_2g088770 | 42.006 | 319 | 177 | 6 | 15 | 330 | 12 | 325 | 4.44e-80 | 248 |
MS.gene02079.t1 | MTR_2g029880 | 59.346 | 214 | 73 | 3 | 141 | 354 | 9 | 208 | 5.42e-80 | 243 |
MS.gene02079.t1 | MTR_7g107520 | 43.438 | 320 | 175 | 4 | 11 | 330 | 7 | 320 | 2.45e-79 | 246 |
MS.gene02079.t1 | MTR_4g133800 | 43.813 | 299 | 157 | 6 | 34 | 331 | 46 | 334 | 1.92e-78 | 244 |
MS.gene02079.t1 | MTR_4g114210 | 41.562 | 320 | 175 | 5 | 16 | 330 | 8 | 320 | 5.35e-77 | 239 |
MS.gene02079.t1 | MTR_4g095450 | 45.513 | 312 | 154 | 8 | 21 | 326 | 19 | 320 | 1.28e-76 | 239 |
MS.gene02079.t1 | MTR_8g075100 | 40.065 | 307 | 176 | 4 | 24 | 330 | 21 | 319 | 1.60e-76 | 238 |
MS.gene02079.t1 | MTR_1g086320 | 39.091 | 330 | 195 | 4 | 5 | 330 | 6 | 333 | 8.53e-76 | 237 |
MS.gene02079.t1 | MTR_5g022870 | 40.566 | 318 | 177 | 8 | 14 | 330 | 10 | 316 | 1.28e-75 | 236 |
MS.gene02079.t1 | MTR_4g074980 | 42.415 | 323 | 150 | 7 | 9 | 330 | 7 | 294 | 1.33e-75 | 235 |
MS.gene02079.t1 | MTR_1g025980 | 41.528 | 301 | 169 | 4 | 29 | 329 | 24 | 317 | 1.58e-75 | 236 |
MS.gene02079.t1 | MTR_5g016010 | 39.339 | 333 | 193 | 6 | 1 | 329 | 1 | 328 | 2.86e-75 | 235 |
MS.gene02079.t1 | MTR_1g086490 | 37.982 | 337 | 196 | 3 | 5 | 330 | 6 | 340 | 2.29e-74 | 234 |
MS.gene02079.t1 | MTR_3g072190 | 47.104 | 259 | 128 | 2 | 72 | 330 | 2 | 251 | 1.52e-73 | 228 |
MS.gene02079.t1 | MTR_4g087965 | 42.951 | 305 | 167 | 5 | 28 | 327 | 41 | 343 | 1.93e-73 | 231 |
MS.gene02079.t1 | MTR_1g009750 | 42.020 | 307 | 170 | 6 | 28 | 330 | 26 | 328 | 2.27e-73 | 231 |
MS.gene02079.t1 | MTR_6g043460 | 43.648 | 307 | 160 | 6 | 32 | 336 | 39 | 334 | 2.33e-73 | 231 |
MS.gene02079.t1 | MTR_7g029030 | 40.541 | 333 | 182 | 8 | 1 | 330 | 1 | 320 | 3.16e-73 | 230 |
MS.gene02079.t1 | MTR_1g101830 | 40.717 | 307 | 174 | 5 | 25 | 330 | 23 | 322 | 1.49e-72 | 228 |
MS.gene02079.t1 | MTR_1g038680 | 41.914 | 303 | 168 | 6 | 33 | 330 | 33 | 332 | 4.17e-72 | 228 |
MS.gene02079.t1 | MTR_4g132490 | 39.394 | 330 | 192 | 5 | 4 | 330 | 3 | 327 | 9.96e-71 | 224 |
MS.gene02079.t1 | MTR_6g027440 | 39.748 | 317 | 182 | 6 | 14 | 330 | 7 | 314 | 1.67e-70 | 223 |
MS.gene02079.t1 | MTR_2g008160 | 39.871 | 311 | 175 | 6 | 25 | 330 | 20 | 323 | 5.83e-70 | 222 |
MS.gene02079.t1 | MTR_7g086870 | 39.474 | 304 | 168 | 6 | 29 | 330 | 22 | 311 | 8.86e-70 | 221 |
MS.gene02079.t1 | MTR_6g043240 | 43.092 | 304 | 157 | 7 | 33 | 333 | 46 | 336 | 9.38e-70 | 222 |
MS.gene02079.t1 | MTR_1g077000 | 40.264 | 303 | 166 | 7 | 29 | 330 | 39 | 327 | 2.17e-69 | 220 |
MS.gene02079.t1 | MTR_6g043280 | 41.066 | 319 | 164 | 7 | 17 | 332 | 37 | 334 | 2.75e-69 | 220 |
MS.gene02079.t1 | MTR_4g074980 | 46.094 | 256 | 125 | 6 | 9 | 260 | 7 | 253 | 7.04e-69 | 216 |
MS.gene02079.t1 | MTR_3g092990 | 39.623 | 318 | 178 | 4 | 14 | 330 | 11 | 315 | 1.66e-68 | 218 |
MS.gene02079.t1 | MTR_0155s0040 | 37.003 | 327 | 187 | 6 | 4 | 330 | 8 | 315 | 1.01e-67 | 216 |
MS.gene02079.t1 | MTR_4g127670 | 40.924 | 303 | 169 | 6 | 28 | 326 | 23 | 319 | 1.54e-67 | 215 |
MS.gene02079.t1 | MTR_5g074860 | 39.286 | 308 | 137 | 4 | 25 | 329 | 25 | 285 | 1.82e-64 | 206 |
MS.gene02079.t1 | MTR_2g008730 | 41.311 | 305 | 144 | 5 | 30 | 330 | 28 | 301 | 3.22e-64 | 206 |
MS.gene02079.t1 | MTR_5g033470 | 39.032 | 310 | 180 | 6 | 27 | 330 | 71 | 377 | 4.93e-64 | 208 |
MS.gene02079.t1 | MTR_1g090760 | 38.608 | 316 | 186 | 7 | 21 | 331 | 19 | 331 | 5.19e-64 | 207 |
MS.gene02079.t1 | MTR_1g009750 | 38.762 | 307 | 163 | 7 | 28 | 330 | 26 | 311 | 2.33e-63 | 204 |
MS.gene02079.t1 | MTR_3g105790 | 39.355 | 310 | 178 | 4 | 24 | 330 | 20 | 322 | 3.75e-62 | 201 |
MS.gene02079.t1 | MTR_2g099175 | 36.246 | 309 | 185 | 5 | 28 | 331 | 35 | 336 | 5.97e-61 | 199 |
MS.gene02079.t1 | MTR_0286s0010 | 38.387 | 310 | 182 | 6 | 25 | 330 | 30 | 334 | 6.77e-61 | 199 |
MS.gene02079.t1 | MTR_6g008075 | 38.387 | 310 | 182 | 6 | 25 | 330 | 30 | 334 | 6.77e-61 | 199 |
MS.gene02079.t1 | MTR_2g067440 | 35.435 | 333 | 181 | 6 | 27 | 329 | 58 | 386 | 7.39e-60 | 197 |
MS.gene02079.t1 | MTR_8g062780 | 36.774 | 310 | 188 | 4 | 25 | 330 | 19 | 324 | 2.76e-59 | 194 |
MS.gene02079.t1 | MTR_2g078610 | 35.511 | 352 | 186 | 9 | 14 | 327 | 55 | 403 | 2.04e-58 | 194 |
MS.gene02079.t1 | MTR_2g077990 | 35.511 | 352 | 186 | 9 | 14 | 327 | 55 | 403 | 3.32e-58 | 194 |
MS.gene02079.t1 | MTR_4g132110 | 37.134 | 307 | 182 | 4 | 32 | 335 | 35 | 333 | 8.39e-58 | 191 |
MS.gene02079.t1 | MTR_1g066380 | 35.179 | 307 | 188 | 4 | 27 | 330 | 25 | 323 | 1.60e-56 | 187 |
MS.gene02079.t1 | MTR_1g066710 | 35.179 | 307 | 188 | 4 | 27 | 330 | 25 | 323 | 2.06e-56 | 187 |
MS.gene02079.t1 | MTR_4g132110 | 36.859 | 312 | 181 | 6 | 32 | 335 | 35 | 338 | 4.53e-56 | 186 |
MS.gene02079.t1 | MTR_2g078280 | 35.777 | 341 | 178 | 9 | 14 | 316 | 55 | 392 | 4.32e-55 | 185 |
MS.gene02079.t1 | MTR_1g066640 | 35.179 | 307 | 188 | 4 | 27 | 330 | 25 | 323 | 7.31e-55 | 183 |
MS.gene02079.t1 | MTR_1g066680 | 35.505 | 307 | 186 | 5 | 27 | 330 | 25 | 322 | 8.62e-55 | 182 |
MS.gene02079.t1 | MTR_2g067450 | 37.134 | 307 | 183 | 6 | 27 | 329 | 9 | 309 | 1.03e-54 | 182 |
MS.gene02079.t1 | MTR_2g008160 | 35.048 | 311 | 155 | 6 | 25 | 330 | 20 | 288 | 1.39e-52 | 176 |
MS.gene02079.t1 | MTR_0147s0010 | 32.530 | 332 | 172 | 5 | 26 | 329 | 74 | 381 | 3.03e-49 | 170 |
MS.gene02079.t1 | MTR_3g072210 | 46.354 | 192 | 94 | 3 | 140 | 330 | 55 | 238 | 3.73e-48 | 162 |
MS.gene02079.t1 | MTR_5g074700 | 42.060 | 233 | 110 | 6 | 102 | 331 | 5 | 215 | 6.10e-46 | 156 |
MS.gene02079.t1 | MTR_1g066380 | 36.015 | 261 | 156 | 4 | 73 | 330 | 3 | 255 | 2.31e-45 | 156 |
MS.gene02079.t1 | MTR_3g105790 | 39.256 | 242 | 141 | 3 | 92 | 330 | 8 | 246 | 1.26e-42 | 149 |
MS.gene02079.t1 | MTR_2g008160 | 44.118 | 170 | 91 | 3 | 25 | 194 | 20 | 185 | 6.33e-42 | 145 |
MS.gene02079.t1 | MTR_7g072490 | 39.759 | 249 | 87 | 5 | 75 | 323 | 2 | 187 | 9.46e-42 | 145 |
MS.gene02079.t1 | MTR_3g072260 | 53.636 | 110 | 51 | 0 | 28 | 137 | 25 | 134 | 1.73e-32 | 119 |
MS.gene02079.t1 | MTR_2g029930 | 54.867 | 113 | 23 | 3 | 14 | 112 | 4 | 102 | 2.20e-29 | 109 |
MS.gene02079.t1 | MTR_5g058120 | 40.491 | 163 | 84 | 3 | 164 | 326 | 6 | 155 | 3.64e-28 | 110 |
MS.gene02079.t1 | MTR_2g078560 | 29.646 | 226 | 126 | 4 | 135 | 329 | 96 | 319 | 6.71e-27 | 108 |
MS.gene02079.t1 | MTR_7g086790 | 34.715 | 193 | 102 | 5 | 76 | 267 | 17 | 186 | 1.16e-24 | 99.8 |
MS.gene02079.t1 | MTR_2g077980 | 28.102 | 274 | 157 | 8 | 91 | 327 | 11 | 281 | 2.24e-22 | 95.9 |
MS.gene02079.t1 | MTR_3g462850 | 38.028 | 142 | 83 | 5 | 193 | 330 | 9 | 149 | 1.74e-20 | 87.0 |
MS.gene02079.t1 | MTR_1g089005 | 38.060 | 134 | 69 | 3 | 14 | 141 | 7 | 132 | 1.66e-19 | 84.7 |
MS.gene02079.t1 | MTR_4g031040 | 33.140 | 172 | 71 | 3 | 91 | 262 | 4 | 131 | 1.90e-19 | 84.0 |
MS.gene02079.t1 | MTR_1g098320 | 48.193 | 83 | 41 | 1 | 251 | 333 | 47 | 127 | 4.56e-19 | 82.8 |
MS.gene02079.t1 | MTR_4g012865 | 46.667 | 75 | 40 | 0 | 26 | 100 | 74 | 148 | 1.33e-16 | 76.6 |
MS.gene02079.t1 | MTR_6g048160 | 56.338 | 71 | 27 | 2 | 68 | 138 | 22 | 88 | 2.88e-16 | 73.6 |
MS.gene02079.t1 | MTR_3g088160 | 26.236 | 263 | 156 | 7 | 63 | 314 | 121 | 356 | 3.14e-16 | 79.7 |
MS.gene02079.t1 | MTR_3g088160 | 26.236 | 263 | 156 | 7 | 63 | 314 | 121 | 356 | 5.13e-16 | 79.3 |
MS.gene02079.t1 | MTR_4g114220 | 46.753 | 77 | 31 | 2 | 56 | 132 | 30 | 96 | 6.23e-16 | 74.3 |
MS.gene02079.t1 | MTR_3g107060 | 28.235 | 255 | 137 | 9 | 61 | 314 | 106 | 315 | 1.52e-14 | 73.9 |
MS.gene02079.t1 | MTR_5g074770 | 39.773 | 88 | 52 | 1 | 242 | 329 | 22 | 108 | 1.22e-13 | 67.0 |
MS.gene02079.t1 | MTR_7g086810 | 33.884 | 121 | 54 | 1 | 27 | 147 | 4 | 98 | 1.30e-13 | 70.1 |
MS.gene02079.t1 | MTR_7g107500 | 43.902 | 82 | 43 | 2 | 249 | 330 | 19 | 97 | 1.69e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02079.t1 | AT2G38380 | 58.900 | 309 | 126 | 1 | 25 | 332 | 27 | 335 | 1.41e-134 | 387 |
MS.gene02079.t1 | AT2G38390 | 56.958 | 309 | 132 | 1 | 25 | 332 | 27 | 335 | 1.66e-130 | 377 |
MS.gene02079.t1 | AT5G06720 | 54.259 | 317 | 145 | 0 | 14 | 330 | 17 | 333 | 3.03e-123 | 358 |
MS.gene02079.t1 | AT4G08780 | 53.797 | 316 | 144 | 2 | 25 | 338 | 20 | 335 | 1.35e-120 | 352 |
MS.gene02079.t1 | AT4G08770 | 54.062 | 320 | 145 | 2 | 25 | 342 | 20 | 339 | 5.38e-120 | 350 |
MS.gene02079.t1 | AT5G06730 | 50.610 | 328 | 162 | 0 | 14 | 341 | 18 | 345 | 2.16e-119 | 349 |
MS.gene02079.t1 | AT3G32980 | 52.553 | 333 | 149 | 3 | 25 | 355 | 27 | 352 | 6.39e-118 | 345 |
MS.gene02079.t1 | AT3G49120 | 51.952 | 333 | 151 | 3 | 25 | 355 | 28 | 353 | 9.39e-116 | 340 |
MS.gene02079.t1 | AT3G49110 | 51.952 | 333 | 151 | 3 | 25 | 355 | 29 | 354 | 9.56e-115 | 337 |
MS.gene02079.t1 | AT5G19880 | 50.938 | 320 | 149 | 5 | 15 | 330 | 14 | 329 | 6.34e-109 | 322 |
MS.gene02079.t1 | AT5G66390 | 47.561 | 328 | 167 | 2 | 3 | 330 | 11 | 333 | 4.92e-103 | 307 |
MS.gene02079.t1 | AT4G36430 | 46.875 | 320 | 162 | 2 | 11 | 330 | 19 | 330 | 3.84e-102 | 304 |
MS.gene02079.t1 | AT2G18140 | 46.645 | 313 | 162 | 2 | 18 | 330 | 28 | 335 | 4.78e-101 | 302 |
MS.gene02079.t1 | AT2G18150 | 46.689 | 302 | 160 | 1 | 29 | 330 | 36 | 336 | 1.38e-99 | 298 |
MS.gene02079.t1 | AT1G44970 | 49.196 | 311 | 156 | 1 | 20 | 330 | 38 | 346 | 1.72e-99 | 298 |
MS.gene02079.t1 | AT1G14550 | 49.180 | 305 | 147 | 3 | 27 | 330 | 24 | 321 | 2.38e-98 | 294 |
MS.gene02079.t1 | AT5G19890 | 50.654 | 306 | 143 | 4 | 27 | 330 | 28 | 327 | 3.09e-96 | 289 |
MS.gene02079.t1 | AT3G50990 | 47.078 | 308 | 162 | 1 | 24 | 331 | 36 | 342 | 7.47e-95 | 286 |
MS.gene02079.t1 | AT1G49570 | 46.795 | 312 | 159 | 4 | 20 | 328 | 41 | 348 | 8.08e-94 | 284 |
MS.gene02079.t1 | AT5G05340 | 48.039 | 306 | 148 | 4 | 27 | 330 | 28 | 324 | 5.95e-93 | 281 |
MS.gene02079.t1 | AT1G14540 | 47.319 | 317 | 160 | 3 | 14 | 330 | 6 | 315 | 2.98e-91 | 276 |
MS.gene02079.t1 | AT4G16270 | 47.667 | 300 | 150 | 5 | 33 | 330 | 54 | 348 | 1.17e-89 | 273 |
MS.gene02079.t1 | AT5G58400 | 45.752 | 306 | 154 | 5 | 25 | 327 | 26 | 322 | 1.40e-87 | 267 |
MS.gene02079.t1 | AT4G37530 | 46.452 | 310 | 159 | 5 | 25 | 330 | 23 | 329 | 1.57e-87 | 267 |
MS.gene02079.t1 | AT5G64120 | 44.910 | 334 | 171 | 7 | 1 | 330 | 4 | 328 | 1.98e-87 | 266 |
MS.gene02079.t1 | AT1G68850 | 45.066 | 304 | 161 | 6 | 32 | 330 | 33 | 335 | 1.46e-85 | 262 |
MS.gene02079.t1 | AT2G35380 | 47.682 | 302 | 154 | 3 | 33 | 330 | 34 | 335 | 3.36e-85 | 261 |
MS.gene02079.t1 | AT2G22420 | 42.763 | 304 | 169 | 3 | 29 | 332 | 23 | 321 | 4.52e-84 | 258 |
MS.gene02079.t1 | AT5G58390 | 45.246 | 305 | 155 | 5 | 25 | 326 | 17 | 312 | 1.65e-83 | 256 |
MS.gene02079.t1 | AT5G17820 | 40.379 | 317 | 176 | 6 | 14 | 330 | 10 | 313 | 7.55e-83 | 254 |
MS.gene02079.t1 | AT1G71695 | 47.078 | 308 | 151 | 6 | 29 | 333 | 44 | 342 | 1.40e-82 | 255 |
MS.gene02079.t1 | AT5G17820 | 40.379 | 317 | 176 | 6 | 14 | 330 | 63 | 366 | 1.97e-81 | 253 |
MS.gene02079.t1 | AT4G37520 | 44.156 | 308 | 165 | 5 | 27 | 330 | 25 | 329 | 2.78e-80 | 248 |
MS.gene02079.t1 | AT3G03670 | 41.118 | 304 | 176 | 2 | 27 | 330 | 21 | 321 | 6.63e-80 | 247 |
MS.gene02079.t1 | AT4G37520 | 43.831 | 308 | 163 | 6 | 27 | 330 | 25 | 326 | 2.18e-79 | 246 |
MS.gene02079.t1 | AT4G25980 | 41.411 | 326 | 176 | 6 | 10 | 330 | 11 | 326 | 2.62e-79 | 246 |
MS.gene02079.t1 | AT2G41480 | 43.974 | 307 | 160 | 5 | 29 | 330 | 29 | 328 | 2.40e-78 | 243 |
MS.gene02079.t1 | AT3G21770 | 41.290 | 310 | 176 | 5 | 20 | 327 | 20 | 325 | 6.40e-78 | 242 |
MS.gene02079.t1 | AT5G39580 | 43.072 | 332 | 171 | 8 | 1 | 330 | 4 | 319 | 8.37e-78 | 242 |
MS.gene02079.t1 | AT5G67400 | 41.401 | 314 | 177 | 5 | 21 | 330 | 19 | 329 | 5.50e-77 | 240 |
MS.gene02079.t1 | AT4G11290 | 39.818 | 329 | 193 | 4 | 4 | 330 | 1 | 326 | 6.03e-77 | 240 |
MS.gene02079.t1 | AT1G05260 | 40.060 | 332 | 190 | 6 | 1 | 330 | 1 | 325 | 2.23e-76 | 238 |
MS.gene02079.t1 | AT3G49960 | 40.729 | 329 | 185 | 6 | 6 | 330 | 7 | 329 | 3.49e-76 | 238 |
MS.gene02079.t1 | AT4G30170 | 42.581 | 310 | 165 | 7 | 26 | 330 | 24 | 325 | 1.36e-75 | 236 |
MS.gene02079.t1 | AT2G18980 | 43.492 | 315 | 163 | 8 | 23 | 330 | 17 | 323 | 1.93e-75 | 236 |
MS.gene02079.t1 | AT5G64110 | 44.079 | 304 | 159 | 5 | 30 | 330 | 35 | 330 | 2.68e-75 | 236 |
MS.gene02079.t1 | AT5G42180 | 41.176 | 323 | 180 | 7 | 8 | 329 | 3 | 316 | 3.73e-75 | 235 |
MS.gene02079.t1 | AT4G37530 | 47.674 | 258 | 130 | 4 | 25 | 278 | 23 | 279 | 4.65e-75 | 233 |
MS.gene02079.t1 | AT5G14130 | 42.500 | 320 | 171 | 8 | 18 | 330 | 17 | 330 | 8.85e-74 | 232 |
MS.gene02079.t1 | AT5G14130 | 42.500 | 320 | 171 | 8 | 18 | 330 | 58 | 371 | 1.78e-73 | 232 |
MS.gene02079.t1 | AT1G05240 | 39.216 | 306 | 170 | 6 | 32 | 330 | 29 | 325 | 8.64e-73 | 229 |
MS.gene02079.t1 | AT1G05250 | 39.216 | 306 | 170 | 6 | 32 | 330 | 29 | 325 | 8.64e-73 | 229 |
MS.gene02079.t1 | AT5G51890 | 38.111 | 307 | 183 | 5 | 25 | 330 | 22 | 322 | 3.56e-71 | 225 |
MS.gene02079.t1 | AT5G64100 | 42.384 | 302 | 159 | 7 | 33 | 330 | 41 | 331 | 3.58e-71 | 225 |
MS.gene02079.t1 | AT1G30870 | 41.311 | 305 | 166 | 6 | 32 | 333 | 54 | 348 | 4.15e-71 | 226 |
MS.gene02079.t1 | AT3G01190 | 39.739 | 307 | 178 | 6 | 25 | 330 | 21 | 321 | 1.10e-68 | 218 |
MS.gene02079.t1 | AT5G15180 | 38.436 | 307 | 184 | 5 | 25 | 330 | 27 | 329 | 1.62e-68 | 218 |
MS.gene02079.t1 | AT4G26010 | 36.728 | 324 | 185 | 7 | 10 | 330 | 3 | 309 | 4.68e-67 | 214 |
MS.gene02079.t1 | AT4G26010 | 36.728 | 324 | 185 | 7 | 10 | 330 | 31 | 337 | 7.39e-67 | 214 |
MS.gene02079.t1 | AT2G39040 | 41.667 | 312 | 169 | 7 | 27 | 330 | 44 | 350 | 1.06e-66 | 214 |
MS.gene02079.t1 | AT4G33870 | 34.118 | 340 | 180 | 6 | 26 | 327 | 65 | 398 | 1.65e-66 | 215 |
MS.gene02079.t1 | AT2G34060 | 40.260 | 308 | 175 | 6 | 26 | 327 | 39 | 343 | 4.02e-65 | 210 |
MS.gene02079.t1 | AT4G33420 | 40.064 | 312 | 171 | 8 | 20 | 330 | 29 | 325 | 7.15e-65 | 209 |
MS.gene02079.t1 | AT5G40150 | 37.658 | 316 | 186 | 5 | 18 | 330 | 21 | 328 | 9.45e-65 | 208 |
MS.gene02079.t1 | AT4G33420 | 40.064 | 312 | 171 | 8 | 20 | 330 | 76 | 372 | 2.61e-64 | 209 |
MS.gene02079.t1 | AT2G35380 | 47.347 | 245 | 125 | 3 | 90 | 330 | 3 | 247 | 5.36e-64 | 204 |
MS.gene02079.t1 | AT1G77100 | 37.500 | 328 | 193 | 6 | 6 | 330 | 1 | 319 | 8.29e-64 | 206 |
MS.gene02079.t1 | AT4G31760 | 36.677 | 319 | 192 | 4 | 15 | 330 | 15 | 326 | 4.36e-63 | 204 |
MS.gene02079.t1 | AT3G28200 | 37.097 | 310 | 183 | 5 | 24 | 330 | 16 | 316 | 5.04e-63 | 204 |
MS.gene02079.t1 | AT2G43480 | 37.793 | 299 | 173 | 5 | 37 | 330 | 45 | 335 | 1.69e-62 | 203 |
MS.gene02079.t1 | AT1G34510 | 37.888 | 322 | 184 | 6 | 10 | 330 | 3 | 309 | 6.22e-62 | 201 |
MS.gene02079.t1 | AT5G22410 | 36.808 | 307 | 176 | 10 | 27 | 326 | 26 | 321 | 7.65e-62 | 201 |
MS.gene02079.t1 | AT2G24800 | 38.636 | 308 | 178 | 5 | 27 | 330 | 29 | 329 | 7.10e-61 | 198 |
MS.gene02079.t1 | AT5G24070 | 34.731 | 334 | 203 | 7 | 4 | 330 | 10 | 335 | 2.90e-60 | 197 |
MS.gene02079.t1 | AT3G17070 | 36.254 | 331 | 197 | 8 | 6 | 330 | 17 | 339 | 1.94e-59 | 195 |
MS.gene02079.t1 | AT4G17690 | 37.582 | 306 | 180 | 5 | 29 | 331 | 26 | 323 | 6.82e-59 | 193 |
MS.gene02079.t1 | AT1G24110 | 36.533 | 323 | 196 | 6 | 11 | 330 | 6 | 322 | 2.17e-58 | 192 |
MS.gene02079.t1 | AT4G21960 | 34.911 | 338 | 203 | 7 | 1 | 331 | 1 | 328 | 2.12e-57 | 189 |
MS.gene02079.t1 | AT5G47000 | 34.985 | 323 | 199 | 6 | 11 | 330 | 16 | 330 | 2.63e-57 | 189 |
MS.gene02079.t1 | AT2G37130 | 35.922 | 309 | 186 | 5 | 26 | 330 | 27 | 327 | 5.48e-56 | 186 |
MS.gene02079.t1 | AT2G37130 | 35.974 | 303 | 182 | 5 | 32 | 330 | 2 | 296 | 4.24e-55 | 182 |
MS.gene02079.t1 | AT3G17070 | 36.466 | 266 | 156 | 8 | 71 | 330 | 18 | 276 | 9.40e-44 | 152 |
MS.gene02079.t1 | AT4G25980 | 42.781 | 187 | 99 | 4 | 10 | 196 | 56 | 234 | 4.28e-41 | 145 |
MS.gene02079.t1 | AT5G39580 | 39.286 | 224 | 117 | 5 | 1 | 217 | 4 | 215 | 4.74e-40 | 141 |
MS.gene02079.t1 | AT2G24800 | 39.881 | 168 | 97 | 1 | 27 | 194 | 29 | 192 | 1.08e-31 | 120 |
MS.gene02079.t1 | AT1G77490 | 26.236 | 263 | 156 | 9 | 63 | 314 | 106 | 341 | 4.92e-16 | 79.3 |
MS.gene02079.t1 | AT1G77490 | 26.236 | 263 | 156 | 9 | 63 | 314 | 106 | 341 | 7.48e-16 | 78.6 |
MS.gene02079.t1 | AT4G32320 | 28.906 | 256 | 132 | 9 | 61 | 313 | 115 | 323 | 1.44e-15 | 77.0 |
MS.gene02079.t1 | AT3G42570 | 37.037 | 108 | 66 | 2 | 90 | 196 | 43 | 149 | 2.18e-13 | 67.4 |
MS.gene02079.t1 | AT4G08390 | 25.651 | 269 | 150 | 11 | 63 | 314 | 127 | 362 | 2.27e-12 | 67.8 |
MS.gene02079.t1 | AT4G08390 | 25.651 | 269 | 150 | 11 | 63 | 314 | 127 | 362 | 2.27e-12 | 67.8 |
MS.gene02079.t1 | AT4G08390 | 25.651 | 269 | 150 | 11 | 63 | 314 | 127 | 362 | 2.27e-12 | 67.8 |
MS.gene02079.t1 | AT4G08390 | 25.651 | 269 | 150 | 11 | 63 | 314 | 126 | 361 | 2.41e-12 | 67.8 |
MS.gene02079.t1 | AT4G35970 | 29.442 | 197 | 116 | 6 | 47 | 233 | 8 | 191 | 6.54e-11 | 62.0 |
Find 69 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATAAATTCAATGATTAAAA+TGG | 0.110406 | 2.2:-58199862 | MS.gene02079:CDS |
CAACAATCTTCAAGGTAAAA+AGG | 0.173562 | 2.2:-58199988 | MS.gene02079:CDS |
ATGATTAAAATGGGTAATAT+TGG | 0.268702 | 2.2:-58199852 | MS.gene02079:CDS |
AGTTCTGGAAGAAAACATTT+TGG | 0.286167 | 2.2:+58199886 | None:intergenic |
TTGCAATTGGGGACATGTTT+TGG | 0.289423 | 2.2:+58201560 | None:intergenic |
TCAGCACAAGAAACTTTATT+AGG | 0.299828 | 2.2:+58201143 | None:intergenic |
TAACAAGAAATCTTCTGAAT+TGG | 0.304436 | 2.2:-58199781 | MS.gene02079:CDS |
CTTCTTAAGGAGTTTACATT+TGG | 0.313523 | 2.2:+58201212 | None:intergenic |
TAGTTCTTGTCTAATTTATC+AGG | 0.314728 | 2.2:+58200014 | None:intergenic |
GGTAATATTGGCGTGCTTAC+CGG | 0.321798 | 2.2:-58199840 | MS.gene02079:CDS |
GAAATACAATAGATTGCAAT+TGG | 0.322953 | 2.2:+58201547 | None:intergenic |
AGAATCAATGGAAGGGGATA+TGG | 0.347058 | 2.2:-58199736 | MS.gene02079:CDS |
TCTAATTTCTCCTTTCGTTC+CGG | 0.350474 | 2.2:+58199821 | None:intergenic |
AAAGTTGTTGACAATGCTAA+TGG | 0.353968 | 2.2:+58199917 | None:intergenic |
ATTTCAGGTGCACATACATT+AGG | 0.358392 | 2.2:-58200194 | MS.gene02079:intron |
TCATTGAATTTATAAAGTTC+TGG | 0.362635 | 2.2:+58199871 | None:intergenic |
AAATTGACAACGTTATTTCC+AGG | 0.373794 | 2.2:+58200050 | None:intergenic |
ATTAGCATTGTCAACAACTT+TGG | 0.377288 | 2.2:-58199915 | MS.gene02079:CDS |
TGTAAACTCCTTAAGAAGAT+TGG | 0.378763 | 2.2:-58201207 | MS.gene02079:CDS |
GATAACATCCAATCTTCTTA+AGG | 0.379047 | 2.2:+58201199 | None:intergenic |
TGCTGTGTAGTAGTTGTGTT+TGG | 0.394905 | 2.2:-58201630 | MS.gene02079:CDS |
TCTAATTTATCAGGAGTTGT+TGG | 0.406098 | 2.2:+58200023 | None:intergenic |
TCCAGGTTGGATCGTTCCAT+TGG | 0.412490 | 2.2:-58200947 | MS.gene02079:CDS |
CTTGCCAATCAAAATCTTCC+AGG | 0.414340 | 2.2:-58200892 | MS.gene02079:CDS |
GAGCTGTTGCTATGAGACTT+AGG | 0.419598 | 2.2:+58201655 | None:intergenic |
TTATACGACTTCGACAATAC+TGG | 0.424284 | 2.2:-58200140 | MS.gene02079:CDS |
AAATACAATAGATTGCAATT+GGG | 0.425537 | 2.2:+58201548 | None:intergenic |
AACTACTACAACAATCTTCA+AGG | 0.429163 | 2.2:-58199996 | MS.gene02079:CDS |
ATAAATTCAATGATTAAAAT+GGG | 0.430148 | 2.2:-58199861 | MS.gene02079:CDS |
AGTTGATCTAAACTGAAGTT+GGG | 0.446411 | 2.2:+58200868 | None:intergenic |
AGCTGGAGTATCTTCTGTTC+TGG | 0.449716 | 2.2:-58201105 | MS.gene02079:intron |
AAGTTGATCTAAACTGAAGT+TGG | 0.456582 | 2.2:+58200867 | None:intergenic |
GGATCGTTCCATTGGGAAGA+AGG | 0.456683 | 2.2:-58200939 | MS.gene02079:CDS |
TGGACGAAGTTGTGCATTTG+AGG | 0.456696 | 2.2:+58201593 | None:intergenic |
GTTGATCTTGTAGCACTCTC+AGG | 0.464144 | 2.2:-58200811 | MS.gene02079:intron |
CCAGGTTGGATCGTTCCATT+GGG | 0.475791 | 2.2:-58200946 | MS.gene02079:CDS |
GTTGGGTCAAGAGTTGGATC+AGG | 0.485351 | 2.2:+58200113 | None:intergenic |
GATATTCTCACACTTGCAGC+TGG | 0.486631 | 2.2:-58201122 | MS.gene02079:CDS |
GAATGCCTGCGAGTATCATC+AGG | 0.492455 | 2.2:-58201491 | MS.gene02079:CDS |
TGTGGCCTCTACAGAATCAA+TGG | 0.496193 | 2.2:-58199748 | MS.gene02079:CDS |
AAGTATGTTGGGTCAAGAGT+TGG | 0.500202 | 2.2:+58200107 | None:intergenic |
ATAATCGATCAAGTATGAAA+AGG | 0.516016 | 2.2:+58200159 | None:intergenic |
CCCAATGGAACGATCCAACC+TGG | 0.520261 | 2.2:+58200946 | None:intergenic |
AGCTGTTGCTATGAGACTTA+GGG | 0.520359 | 2.2:+58201656 | None:intergenic |
AATACAATAGATTGCAATTG+GGG | 0.523282 | 2.2:+58201549 | None:intergenic |
CAATGTCCTCAAAATGGACC+TGG | 0.526827 | 2.2:-58200068 | MS.gene02079:CDS |
TGTATTTCAAATCTTAGAGA+AGG | 0.529827 | 2.2:-58201532 | MS.gene02079:CDS |
AAGTTGTGCATTTGAGGAGA+AGG | 0.531405 | 2.2:+58201599 | None:intergenic |
TGTGTAGTAGTTGTGTTTGG+AGG | 0.538078 | 2.2:-58201627 | MS.gene02079:CDS |
CAAGAATTGTTCTCAACACC+GGG | 0.545895 | 2.2:-58199948 | MS.gene02079:CDS |
CTCTACAGAATCAATGGAAG+GGG | 0.548427 | 2.2:-58199742 | MS.gene02079:CDS |
AGACTATCCCTTCTTCCCAA+TGG | 0.549067 | 2.2:+58200931 | None:intergenic |
ATTAAGAGTGAACAAGATGC+TGG | 0.561072 | 2.2:-58201236 | MS.gene02079:CDS |
TCTAAACTGAAGTTGGGACC+TGG | 0.569967 | 2.2:+58200874 | None:intergenic |
GCCTCTACAGAATCAATGGA+AGG | 0.575446 | 2.2:-58199744 | MS.gene02079:CDS |
GGCGTGCTTACCGGAACGAA+AGG | 0.578682 | 2.2:-58199831 | MS.gene02079:CDS |
CCCTTCCATTGATTCTGTAG+AGG | 0.580821 | 2.2:+58199743 | None:intergenic |
TCAAGAATTGTTCTCAACAC+CGG | 0.581146 | 2.2:-58199949 | MS.gene02079:CDS |
TGAATTGGATCTTGCCACTG+TGG | 0.589040 | 2.2:-58199766 | MS.gene02079:CDS |
AGTTGTGCATTTGAGGAGAA+GGG | 0.593995 | 2.2:+58201600 | None:intergenic |
TGCTGATCAAGGACTCAACA+CGG | 0.603854 | 2.2:-58200833 | MS.gene02079:CDS |
CCTCTACAGAATCAATGGAA+GGG | 0.611293 | 2.2:-58199743 | MS.gene02079:CDS |
CAATCAAATTAAGACTGAGG+TGG | 0.612704 | 2.2:-58201177 | MS.gene02079:CDS |
TGAAGCCTGATGATACTCGC+AGG | 0.615935 | 2.2:+58201486 | None:intergenic |
GATCGTTCCATTGGGAAGAA+GGG | 0.616463 | 2.2:-58200938 | MS.gene02079:CDS |
ATGCTAATGGTATCTGCACC+CGG | 0.620520 | 2.2:+58199930 | None:intergenic |
TATCAATCAAATTAAGACTG+AGG | 0.654516 | 2.2:-58201180 | MS.gene02079:CDS |
TATGTATATTCACAGAGTGG+GGG | 0.680063 | 2.2:-58200970 | MS.gene02079:intron |
TGATTCTGTAGAGGCCACAG+TGG | 0.717951 | 2.2:+58199752 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTATTATTATTATATT+AGG | + | chr2.2:58200622-58200641 | None:intergenic | 0.0% |
!! | ATAAATTCAATGATTAAAAT+GGG | - | chr2.2:58201524-58201543 | MS.gene02079:CDS | 10.0% |
!! | ATTATTATTATATTAGGAAT+TGG | + | chr2.2:58200616-58200635 | None:intergenic | 10.0% |
!! | GTAAAATTACTAAAAATAAT+TGG | + | chr2.2:58200321-58200340 | None:intergenic | 10.0% |
!! | TATAAATTCAATGATTAAAA+TGG | - | chr2.2:58201523-58201542 | MS.gene02079:CDS | 10.0% |
!! | TTTACATAATATCATAATAA+TGG | - | chr2.2:58200336-58200355 | MS.gene02079:intron | 10.0% |
!!! | ATATTATTTATGATTTTAAC+AGG | - | chr2.2:58200088-58200107 | MS.gene02079:CDS | 10.0% |
!!! | TATTATTTATGATTTTAACA+GGG | - | chr2.2:58200089-58200108 | MS.gene02079:CDS | 10.0% |
!!! | TCTTATTTATGTAAAAATTA+AGG | + | chr2.2:58200692-58200711 | None:intergenic | 10.0% |
!!! | TCTTTTATTTATTTATTGTA+TGG | - | chr2.2:58200370-58200389 | MS.gene02079:intron | 10.0% |
!!! | TTTAAATTTTAATAACGCTA+TGG | + | chr2.2:58200740-58200759 | None:intergenic | 15.0% |
!! | AAATACAATAGATTGCAATT+GGG | + | chr2.2:58199840-58199859 | None:intergenic | 20.0% |
!! | ACGAAAAAATTATTCACTTT+CGG | + | chr2.2:58200004-58200023 | None:intergenic | 20.0% |
!! | ATGATTAAAATGGGTAATAT+TGG | - | chr2.2:58201533-58201552 | MS.gene02079:CDS | 20.0% |
!! | TAAAAAAAGACAAATTGCAT+CGG | - | chr2.2:58200929-58200948 | MS.gene02079:CDS | 20.0% |
!! | TCATTGAATTTATAAAGTTC+TGG | + | chr2.2:58201517-58201536 | None:intergenic | 20.0% |
!! | TTCATTTGTATTTACGATAA+TGG | - | chr2.2:58199962-58199981 | MS.gene02079:CDS | 20.0% |
!!! | ATAATATGACATTTTTGAGA+GGG | - | chr2.2:58200042-58200061 | MS.gene02079:CDS | 20.0% |
!!! | TGCAATTTGTCTTTTTTTAT+TGG | + | chr2.2:58200928-58200947 | None:intergenic | 20.0% |
! | AAAGTAAGTAAATCTTGATG+AGG | - | chr2.2:58201041-58201060 | MS.gene02079:intron | 25.0% |
! | AACAATCTTCAAGGTAAAAA+GGG | - | chr2.2:58201398-58201417 | MS.gene02079:intron | 25.0% |
! | AATACAATAGATTGCAATTG+GGG | + | chr2.2:58199839-58199858 | None:intergenic | 25.0% |
! | ATAATCGATCAAGTATGAAA+AGG | + | chr2.2:58201229-58201248 | None:intergenic | 25.0% |
! | CAAGTTAGTTCAAAATCAAA+TGG | + | chr2.2:58200883-58200902 | None:intergenic | 25.0% |
! | GAAATACAATAGATTGCAAT+TGG | + | chr2.2:58199841-58199860 | None:intergenic | 25.0% |
! | TAACAAGAAATCTTCTGAAT+TGG | - | chr2.2:58201604-58201623 | MS.gene02079:CDS | 25.0% |
! | TAGTTCTTGTCTAATTTATC+AGG | + | chr2.2:58201374-58201393 | None:intergenic | 25.0% |
! | TATCAATCAAATTAAGACTG+AGG | - | chr2.2:58200205-58200224 | MS.gene02079:intron | 25.0% |
! | TGTATTTCAAATCTTAGAGA+AGG | - | chr2.2:58199853-58199872 | MS.gene02079:CDS | 25.0% |
! | TTACAAAGAAATCATCTCAA+TGG | + | chr2.2:58200952-58200971 | None:intergenic | 25.0% |
!!! | CATAATATGACATTTTTGAG+AGG | - | chr2.2:58200041-58200060 | MS.gene02079:CDS | 25.0% |
AAAGTTGTTGACAATGCTAA+TGG | + | chr2.2:58201471-58201490 | None:intergenic | 30.0% | |
AACTACTACAACAATCTTCA+AGG | - | chr2.2:58201389-58201408 | MS.gene02079:intron | 30.0% | |
AGTTGATCTAAACTGAAGTT+GGG | + | chr2.2:58200520-58200539 | None:intergenic | 30.0% | |
ATCTATGTATATTCACAGAG+TGG | - | chr2.2:58200412-58200431 | MS.gene02079:intron | 30.0% | |
ATTAGCATTGTCAACAACTT+TGG | - | chr2.2:58201470-58201489 | MS.gene02079:CDS | 30.0% | |
CAAAAACAATGTCCTCAAAA+TGG | - | chr2.2:58201311-58201330 | MS.gene02079:intron | 30.0% | |
CAACAATCTTCAAGGTAAAA+AGG | - | chr2.2:58201397-58201416 | MS.gene02079:intron | 30.0% | |
CTTCTTAAGGAGTTTACATT+TGG | + | chr2.2:58200176-58200195 | None:intergenic | 30.0% | |
GATAACATCCAATCTTCTTA+AGG | + | chr2.2:58200189-58200208 | None:intergenic | 30.0% | |
TAACTAAACGCTTCAATTTC+AGG | - | chr2.2:58201176-58201195 | MS.gene02079:CDS | 30.0% | |
TCAGCACAAGAAACTTTATT+AGG | + | chr2.2:58200245-58200264 | None:intergenic | 30.0% | |
TCTAATTTATCAGGAGTTGT+TGG | + | chr2.2:58201365-58201384 | None:intergenic | 30.0% | |
TCTATGTATATTCACAGAGT+GGG | - | chr2.2:58200413-58200432 | MS.gene02079:intron | 30.0% | |
TCTTATCTAAATGTTGTCGT+TGG | + | chr2.2:58200657-58200676 | None:intergenic | 30.0% | |
TGTAAACTCCTTAAGAAGAT+TGG | - | chr2.2:58200178-58200197 | MS.gene02079:CDS | 30.0% | |
! | AAATTGACAACGTTATTTCC+AGG | + | chr2.2:58201338-58201357 | None:intergenic | 30.0% |
! | AAGTTGATCTAAACTGAAGT+TGG | + | chr2.2:58200521-58200540 | None:intergenic | 30.0% |
! | CTTGATGAATTAGTCTATAG+AGG | - | chr2.2:58200793-58200812 | MS.gene02079:intron | 30.0% |
!! | GCAACTGTTTTAAGTATGTT+GGG | + | chr2.2:58201292-58201311 | None:intergenic | 30.0% |
!! | TGCAACTGTTTTAAGTATGT+TGG | + | chr2.2:58201293-58201312 | None:intergenic | 30.0% |
!!! | AGTTCTGGAAGAAAACATTT+TGG | + | chr2.2:58201502-58201521 | None:intergenic | 30.0% |
ATTAAGAGTGAACAAGATGC+TGG | - | chr2.2:58200149-58200168 | MS.gene02079:CDS | 35.0% | |
CAATCAAATTAAGACTGAGG+TGG | - | chr2.2:58200208-58200227 | MS.gene02079:intron | 35.0% | |
CTATGTATATTCACAGAGTG+GGG | - | chr2.2:58200414-58200433 | MS.gene02079:intron | 35.0% | |
TATGTATATTCACAGAGTGG+GGG | - | chr2.2:58200415-58200434 | MS.gene02079:intron | 35.0% | |
TCAAGAATTGTTCTCAACAC+CGG | - | chr2.2:58201436-58201455 | MS.gene02079:intron | 35.0% | |
TCTAATTTCTCCTTTCGTTC+CGG | + | chr2.2:58201567-58201586 | None:intergenic | 35.0% | |
TTATACGACTTCGACAATAC+TGG | - | chr2.2:58201245-58201264 | MS.gene02079:CDS | 35.0% | |
! | ATTTCAGGTGCACATACATT+AGG | - | chr2.2:58201191-58201210 | MS.gene02079:CDS | 35.0% |
! | GAATTAGTCTATAGAGGAGT+GGG | - | chr2.2:58200799-58200818 | MS.gene02079:intron | 35.0% |
! | TGAATTAGTCTATAGAGGAG+TGG | - | chr2.2:58200798-58200817 | MS.gene02079:intron | 35.0% |
! | TTATTTCCAGGTCCATTTTG+AGG | + | chr2.2:58201326-58201345 | None:intergenic | 35.0% |
!! | AAATCTGCTTTTGCTGATCA+AGG | - | chr2.2:58200541-58200560 | MS.gene02079:intron | 35.0% |
!! | AAATTGCATCGGTTAACACT+TGG | - | chr2.2:58201003-58201022 | MS.gene02079:intron | 35.0% |
!!! | TGGAAGATTTTGATTGGCAA+GGG | + | chr2.2:58200494-58200513 | None:intergenic | 35.0% |
AAGTATGTTGGGTCAAGAGT+TGG | + | chr2.2:58201281-58201300 | None:intergenic | 40.0% | |
AAGTTGTGCATTTGAGGAGA+AGG | + | chr2.2:58199789-58199808 | None:intergenic | 40.0% | |
AGAATCAATGGAAGGGGATA+TGG | - | chr2.2:58201649-58201668 | MS.gene02079:CDS | 40.0% | |
AGCTGTTGCTATGAGACTTA+GGG | + | chr2.2:58199732-58199751 | None:intergenic | 40.0% | |
AGTTGTGCATTTGAGGAGAA+GGG | + | chr2.2:58199788-58199807 | None:intergenic | 40.0% | |
ATCATGTGCTATATCGCTCT+AGG | + | chr2.2:58201140-58201159 | None:intergenic | 40.0% | |
CAAGAATTGTTCTCAACACC+GGG | - | chr2.2:58201437-58201456 | MS.gene02079:intron | 40.0% | |
CCTCTACAGAATCAATGGAA+GGG | - | chr2.2:58201642-58201661 | MS.gene02079:CDS | 40.0% | |
CTCTACAGAATCAATGGAAG+GGG | - | chr2.2:58201643-58201662 | MS.gene02079:CDS | 40.0% | |
CTCTCAGGTATGCAAATACA+TGG | - | chr2.2:58200589-58200608 | MS.gene02079:intron | 40.0% | |
CTTGCCAATCAAAATCTTCC+AGG | - | chr2.2:58200493-58200512 | MS.gene02079:intron | 40.0% | |
GATGAGGAATTGTTCGAACT+AGG | - | chr2.2:58201057-58201076 | MS.gene02079:intron | 40.0% | |
TAGAGCGATATAGCACATGA+TGG | - | chr2.2:58201139-58201158 | MS.gene02079:CDS | 40.0% | |
TCATGTGCTATATCGCTCTA+GGG | + | chr2.2:58201139-58201158 | None:intergenic | 40.0% | |
TGCTGTGTAGTAGTTGTGTT+TGG | - | chr2.2:58199755-58199774 | MS.gene02079:CDS | 40.0% | |
TGTGTAGTAGTTGTGTTTGG+AGG | - | chr2.2:58199758-58199777 | MS.gene02079:CDS | 40.0% | |
! | CATCGGTTAACACTTGGATA+AGG | - | chr2.2:58201009-58201028 | MS.gene02079:intron | 40.0% |
! | TTGCAATTGGGGACATGTTT+TGG | + | chr2.2:58199828-58199847 | None:intergenic | 40.0% |
!!! | CATGTTTTGGCGTAAAAGTC+TGG | + | chr2.2:58199815-58199834 | None:intergenic | 40.0% |
!!! | CTGGAAGATTTTGATTGGCA+AGG | + | chr2.2:58200495-58200514 | None:intergenic | 40.0% |
AGACTATCCCTTCTTCCCAA+TGG | + | chr2.2:58200457-58200476 | None:intergenic | 45.0% | |
ATGCTAATGGTATCTGCACC+CGG | + | chr2.2:58201458-58201477 | None:intergenic | 45.0% | |
CAATGTCCTCAAAATGGACC+TGG | - | chr2.2:58201317-58201336 | MS.gene02079:intron | 45.0% | |
GAGCTGTTGCTATGAGACTT+AGG | + | chr2.2:58199733-58199752 | None:intergenic | 45.0% | |
GATATTCTCACACTTGCAGC+TGG | - | chr2.2:58200263-58200282 | MS.gene02079:intron | 45.0% | |
GATCGTTCCATTGGGAAGAA+GGG | - | chr2.2:58200447-58200466 | MS.gene02079:intron | 45.0% | |
GCCTCTACAGAATCAATGGA+AGG | - | chr2.2:58201641-58201660 | MS.gene02079:CDS | 45.0% | |
GGTAATATTGGCGTGCTTAC+CGG | - | chr2.2:58201545-58201564 | MS.gene02079:CDS | 45.0% | |
GTTGATCTTGTAGCACTCTC+AGG | - | chr2.2:58200574-58200593 | MS.gene02079:intron | 45.0% | |
TCTAAACTGAAGTTGGGACC+TGG | + | chr2.2:58200514-58200533 | None:intergenic | 45.0% | |
TGAATTGGATCTTGCCACTG+TGG | - | chr2.2:58201619-58201638 | MS.gene02079:CDS | 45.0% | |
TGCTGATCAAGGACTCAACA+CGG | - | chr2.2:58200552-58200571 | MS.gene02079:intron | 45.0% | |
TGGACGAAGTTGTGCATTTG+AGG | + | chr2.2:58199795-58199814 | None:intergenic | 45.0% | |
TGTGGCCTCTACAGAATCAA+TGG | - | chr2.2:58201637-58201656 | MS.gene02079:CDS | 45.0% | |
! | AGCTGGAGTATCTTCTGTTC+TGG | - | chr2.2:58200280-58200299 | MS.gene02079:intron | 45.0% |
!! | CCCTTCCATTGATTCTGTAG+AGG | + | chr2.2:58201645-58201664 | None:intergenic | 45.0% |
!! | GGGACCTGGAAGATTTTGAT+TGG | + | chr2.2:58200500-58200519 | None:intergenic | 45.0% |
!! | TAAAATTACTAAAAATAATT+GGG | + | chr2.2:58200320-58200339 | None:intergenic | 5.0% |
!!! | TATTAAAATTTAAAATATTG+AGG | - | chr2.2:58200746-58200765 | MS.gene02079:intron | 5.0% |
GAATGCCTGCGAGTATCATC+AGG | - | chr2.2:58199894-58199913 | MS.gene02079:CDS | 50.0% | |
GGATCGTTCCATTGGGAAGA+AGG | - | chr2.2:58200446-58200465 | MS.gene02079:intron | 50.0% | |
GTTGGGTCAAGAGTTGGATC+AGG | + | chr2.2:58201275-58201294 | None:intergenic | 50.0% | |
TGAAGCCTGATGATACTCGC+AGG | + | chr2.2:58199902-58199921 | None:intergenic | 50.0% | |
TGATTCTGTAGAGGCCACAG+TGG | + | chr2.2:58201636-58201655 | None:intergenic | 50.0% | |
! | CCAGGTTGGATCGTTCCATT+GGG | - | chr2.2:58200439-58200458 | MS.gene02079:intron | 50.0% |
! | TCCAGGTTGGATCGTTCCAT+TGG | - | chr2.2:58200438-58200457 | MS.gene02079:intron | 50.0% |
CCCAATGGAACGATCCAACC+TGG | + | chr2.2:58200442-58200461 | None:intergenic | 55.0% | |
TATTCACAGAGTGGGGGTCC+AGG | - | chr2.2:58200421-58200440 | MS.gene02079:intron | 55.0% | |
GGCGTGCTTACCGGAACGAA+AGG | - | chr2.2:58201554-58201573 | MS.gene02079:CDS | 60.0% | |
CACAGAGTGGGGGTCCAGGT+TGG | - | chr2.2:58200425-58200444 | MS.gene02079:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 58199722 | 58201685 | 58199722 | ID=MS.gene02079 |
chr2.2 | mRNA | 58199722 | 58201685 | 58199722 | ID=MS.gene02079.t1;Parent=MS.gene02079 |
chr2.2 | exon | 58201464 | 58201685 | 58201464 | ID=MS.gene02079.t1.exon1;Parent=MS.gene02079.t1 |
chr2.2 | CDS | 58201464 | 58201685 | 58201464 | ID=cds.MS.gene02079.t1;Parent=MS.gene02079.t1 |
chr2.2 | exon | 58201106 | 58201297 | 58201106 | ID=MS.gene02079.t1.exon2;Parent=MS.gene02079.t1 |
chr2.2 | CDS | 58201106 | 58201297 | 58201106 | ID=cds.MS.gene02079.t1;Parent=MS.gene02079.t1 |
chr2.2 | exon | 58200812 | 58200977 | 58200812 | ID=MS.gene02079.t1.exon3;Parent=MS.gene02079.t1 |
chr2.2 | CDS | 58200812 | 58200977 | 58200812 | ID=cds.MS.gene02079.t1;Parent=MS.gene02079.t1 |
chr2.2 | exon | 58199722 | 58200209 | 58199722 | ID=MS.gene02079.t1.exon4;Parent=MS.gene02079.t1 |
chr2.2 | CDS | 58199722 | 58200209 | 58199722 | ID=cds.MS.gene02079.t1;Parent=MS.gene02079.t1 |
Gene Sequence |
Protein sequence |