AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02089

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02089.t1 MTR_2g029910 92.068 353 28 0 1 353 1 353 0.0 660
MS.gene02089.t1 MTR_2g029850 76.068 351 82 2 4 353 3 352 0.0 532
MS.gene02089.t1 MTR_2g029860 74.286 350 85 4 7 353 6 353 0.0 508
MS.gene02089.t1 MTR_2g029820 68.732 355 104 4 4 353 3 355 7.83e-178 497
MS.gene02089.t1 MTR_2g029800 68.182 352 109 2 4 353 3 353 3.79e-176 493
MS.gene02089.t1 MTR_2g029815 67.733 344 109 2 11 353 10 352 2.58e-169 476
MS.gene02089.t1 MTR_2g029830 70.060 334 94 3 23 351 21 353 2.78e-165 466
MS.gene02089.t1 MTR_2g029740 64.306 353 121 2 4 352 3 354 2.78e-161 455
MS.gene02089.t1 MTR_2g028980 63.739 353 123 2 4 352 3 354 3.42e-159 450
MS.gene02089.t1 MTR_2g029750 64.124 354 121 3 4 353 3 354 2.80e-157 445
MS.gene02089.t1 MTR_2g029560 63.235 340 117 3 14 353 13 344 1.79e-149 425
MS.gene02089.t1 MTR_2g029730 62.391 343 121 3 11 353 11 345 7.83e-146 416
MS.gene02089.t1 MTR_2g029830 69.858 282 79 3 75 351 5 285 1.19e-135 388
MS.gene02089.t1 MTR_7g093370 59.091 308 124 2 26 332 65 371 2.16e-122 357
MS.gene02089.t1 MTR_1g054205 56.452 310 133 2 24 332 18 326 7.68e-116 339
MS.gene02089.t1 MTR_2g029880 75.234 214 42 2 140 353 7 209 1.45e-108 316
MS.gene02089.t1 MTR_4g125940 48.961 337 161 5 1 333 1 330 2.32e-101 302
MS.gene02089.t1 MTR_8g076820 49.013 304 153 2 30 333 30 331 8.46e-101 301
MS.gene02089.t1 MTR_2g084090 49.026 308 148 2 25 332 20 318 9.88e-100 298
MS.gene02089.t1 MTR_5g021060 49.175 303 152 2 30 332 30 330 2.96e-99 297
MS.gene02089.t1 MTR_5g017860 47.213 305 158 2 28 332 25 326 4.50e-97 291
MS.gene02089.t1 MTR_5g017850 47.557 307 154 3 28 332 25 326 5.84e-96 288
MS.gene02089.t1 MTR_3g094650 47.222 324 157 4 6 328 8 318 1.87e-95 287
MS.gene02089.t1 MTR_3g466200 47.840 324 154 5 11 332 10 320 1.02e-94 285
MS.gene02089.t1 MTR_4g083710 48.377 308 150 4 27 332 24 324 2.71e-94 284
MS.gene02089.t1 MTR_1g022970 48.185 303 156 1 30 332 46 347 5.69e-94 284
MS.gene02089.t1 MTR_2g084080 45.538 325 167 3 8 332 3 317 1.04e-93 282
MS.gene02089.t1 MTR_4g029170 47.335 319 156 5 16 332 13 321 7.94e-93 280
MS.gene02089.t1 MTR_2g084110 47.896 309 149 4 25 332 20 317 1.84e-92 279
MS.gene02089.t1 MTR_2g040000 47.403 308 156 3 29 333 28 332 2.68e-91 276
MS.gene02089.t1 MTR_4g125940 53.069 277 125 3 59 333 2 275 3.14e-91 274
MS.gene02089.t1 MTR_4g029180 49.669 302 140 5 33 332 30 321 7.04e-91 275
MS.gene02089.t1 MTR_3g072190 46.254 307 155 3 26 332 22 318 8.85e-91 275
MS.gene02089.t1 MTR_7g072510 46.078 306 155 3 27 332 17 312 1.29e-90 274
MS.gene02089.t1 MTR_2g084020 44.615 325 171 3 8 332 3 318 2.80e-90 273
MS.gene02089.t1 MTR_5g049280 43.450 313 173 4 24 333 27 338 3.73e-90 274
MS.gene02089.t1 MTR_4g029200 46.452 310 156 3 23 332 39 338 1.27e-89 273
MS.gene02089.t1 MTR_4g122640 45.724 304 159 4 30 332 38 336 1.63e-88 270
MS.gene02089.t1 MTR_2g084010 44.615 325 171 3 8 332 3 318 2.79e-88 268
MS.gene02089.t1 MTR_3g094670 45.679 324 162 4 6 328 8 318 3.16e-88 268
MS.gene02089.t1 MTR_5g074970 45.988 324 163 4 12 332 12 326 3.40e-88 268
MS.gene02089.t1 MTR_5g074760 45.672 335 165 6 1 332 1 321 8.86e-88 267
MS.gene02089.t1 MTR_5g074740 47.097 310 152 5 28 334 23 323 2.06e-87 266
MS.gene02089.t1 MTR_3g094630 46.037 328 163 4 6 332 8 322 3.96e-87 266
MS.gene02089.t1 MTR_2g084000 45.425 306 158 3 27 332 23 319 8.04e-87 265
MS.gene02089.t1 MTR_4g074995 46.753 308 142 5 27 332 21 308 1.83e-86 263
MS.gene02089.t1 MTR_5g074860 46.296 324 162 6 12 332 11 325 9.87e-86 262
MS.gene02089.t1 MTR_5g074710 46.452 310 154 6 28 334 23 323 1.15e-85 262
MS.gene02089.t1 MTR_7g072480 46.885 305 152 3 28 332 22 316 1.23e-85 261
MS.gene02089.t1 MTR_4g030890 45.955 309 159 5 25 332 95 396 1.79e-85 265
MS.gene02089.t1 MTR_5g014100 45.724 304 160 4 33 332 29 331 1.99e-84 259
MS.gene02089.t1 MTR_5g083860 42.947 319 168 4 15 332 20 325 2.07e-84 259
MS.gene02089.t1 MTR_3g467600 47.419 310 152 5 26 332 23 324 2.44e-84 258
MS.gene02089.t1 MTR_4g029190 45.928 307 157 5 27 332 42 340 3.67e-84 259
MS.gene02089.t1 MTR_4g031140 44.156 308 164 5 26 332 24 324 4.69e-84 258
MS.gene02089.t1 MTR_2g088770 43.574 319 173 6 16 332 12 325 3.15e-82 253
MS.gene02089.t1 MTR_3g466180 43.038 316 170 3 17 332 18 323 1.57e-81 251
MS.gene02089.t1 MTR_4g046713 42.236 322 177 6 12 332 13 326 3.42e-80 248
MS.gene02089.t1 MTR_1g115900 42.368 321 173 6 14 332 11 321 2.99e-79 246
MS.gene02089.t1 MTR_4g074990 42.216 334 158 7 1 332 5 305 7.57e-79 244
MS.gene02089.t1 MTR_4g114210 42.368 321 172 7 17 332 8 320 1.01e-78 244
MS.gene02089.t1 MTR_4g133800 44.702 302 153 8 35 334 46 335 3.67e-78 243
MS.gene02089.t1 MTR_7g107520 41.745 321 180 5 12 332 7 320 1.56e-77 241
MS.gene02089.t1 MTR_3g092990 39.939 328 190 4 7 333 6 327 2.55e-76 238
MS.gene02089.t1 MTR_2g008710 43.234 303 160 6 34 332 31 325 1.31e-75 236
MS.gene02089.t1 MTR_1g101830 42.857 308 167 6 26 332 23 322 2.06e-75 236
MS.gene02089.t1 MTR_3g072190 46.538 260 129 3 73 332 2 251 1.85e-74 231
MS.gene02089.t1 MTR_8g075100 41.158 311 168 9 25 332 21 319 3.91e-74 232
MS.gene02089.t1 MTR_5g016010 41.337 329 183 6 7 331 6 328 3.91e-74 233
MS.gene02089.t1 MTR_7g026990 40.864 301 163 5 34 332 35 322 5.88e-73 229
MS.gene02089.t1 MTR_6g043280 40.964 332 173 8 4 333 23 333 1.27e-72 229
MS.gene02089.t1 MTR_1g086320 38.855 332 197 4 5 332 4 333 1.94e-72 228
MS.gene02089.t1 MTR_2g437770 41.447 304 165 6 30 332 50 341 3.26e-72 228
MS.gene02089.t1 MTR_0155s0040 38.700 323 176 9 11 332 14 315 1.48e-71 225
MS.gene02089.t1 MTR_4g074980 40.964 332 154 9 1 332 5 294 3.67e-71 224
MS.gene02089.t1 MTR_5g022870 39.806 309 175 8 25 332 18 316 8.28e-71 224
MS.gene02089.t1 MTR_1g025980 40.264 303 173 5 30 332 24 318 1.19e-70 223
MS.gene02089.t1 MTR_1g086490 38.012 342 199 5 4 334 3 342 1.30e-70 224
MS.gene02089.t1 MTR_4g132490 38.855 332 194 5 5 332 1 327 2.96e-70 223
MS.gene02089.t1 MTR_7g086820 39.739 307 171 6 28 332 18 312 3.16e-70 222
MS.gene02089.t1 MTR_1g077000 39.274 303 170 5 30 332 39 327 3.53e-69 220
MS.gene02089.t1 MTR_1g009750 40.065 307 177 4 29 332 26 328 5.97e-69 219
MS.gene02089.t1 MTR_7g029030 42.357 314 162 8 25 332 20 320 2.02e-68 218
MS.gene02089.t1 MTR_1g090760 36.873 339 202 5 1 334 1 332 2.13e-68 218
MS.gene02089.t1 MTR_2g008160 40.705 312 172 8 26 332 20 323 2.16e-68 218
MS.gene02089.t1 MTR_4g074980 44.318 264 130 5 1 262 5 253 2.47e-68 215
MS.gene02089.t1 MTR_4g087965 39.672 305 178 4 29 329 41 343 8.81e-68 217
MS.gene02089.t1 MTR_6g043240 42.484 306 157 9 30 332 42 331 1.03e-67 217
MS.gene02089.t1 MTR_1g038680 38.158 304 179 5 34 332 33 332 2.96e-67 215
MS.gene02089.t1 MTR_4g095450 41.231 325 172 7 8 328 11 320 1.25e-66 213
MS.gene02089.t1 MTR_4g127670 43.092 304 162 5 29 328 23 319 1.69e-66 213
MS.gene02089.t1 MTR_6g043460 41.196 301 163 6 30 328 36 324 1.70e-66 213
MS.gene02089.t1 MTR_5g074860 39.506 324 145 5 12 332 11 286 1.52e-65 209
MS.gene02089.t1 MTR_2g067440 37.607 351 180 8 16 331 40 386 3.47e-65 211
MS.gene02089.t1 MTR_3g092990 37.690 329 187 5 6 333 5 316 1.03e-63 205
MS.gene02089.t1 MTR_2g077990 36.467 351 183 8 15 328 55 402 4.46e-61 201
MS.gene02089.t1 MTR_7g086870 37.908 306 173 7 30 333 22 312 7.30e-61 198
MS.gene02089.t1 MTR_1g009750 37.377 305 171 5 29 332 26 311 1.47e-60 197
MS.gene02089.t1 MTR_2g078610 35.795 352 186 8 15 329 55 403 1.52e-60 200
MS.gene02089.t1 MTR_8g062780 36.025 322 198 4 16 334 10 326 1.75e-60 197
MS.gene02089.t1 MTR_6g027440 38.462 312 178 7 23 332 15 314 1.97e-60 197
MS.gene02089.t1 MTR_0147s0010 35.802 324 173 4 27 331 74 381 4.04e-60 198
MS.gene02089.t1 MTR_2g099175 33.657 309 194 4 29 333 35 336 1.28e-58 193
MS.gene02089.t1 MTR_5g033470 35.048 311 194 6 27 332 70 377 1.41e-58 194
MS.gene02089.t1 MTR_2g078280 35.569 343 177 8 15 318 55 392 1.17e-56 189
MS.gene02089.t1 MTR_0286s0010 33.866 313 193 5 26 332 30 334 1.71e-55 184
MS.gene02089.t1 MTR_6g008075 33.866 313 193 5 26 332 30 334 1.71e-55 184
MS.gene02089.t1 MTR_2g067450 38.436 307 180 6 28 331 9 309 3.25e-54 181
MS.gene02089.t1 MTR_3g105790 36.508 315 191 4 22 334 17 324 3.71e-54 181
MS.gene02089.t1 MTR_2g008730 37.294 303 154 6 34 332 31 301 4.43e-54 180
MS.gene02089.t1 MTR_2g008160 35.577 312 153 8 26 332 20 288 2.30e-51 172
MS.gene02089.t1 MTR_1g066380 33.876 307 193 4 28 332 25 323 2.23e-50 171
MS.gene02089.t1 MTR_1g066710 33.442 308 195 4 27 332 24 323 2.98e-50 171
MS.gene02089.t1 MTR_1g066640 34.091 308 193 4 27 332 24 323 5.23e-50 170
MS.gene02089.t1 MTR_1g066680 34.091 308 192 5 27 332 24 322 4.26e-49 167
MS.gene02089.t1 MTR_4g132110 33.663 303 191 4 33 333 35 329 2.03e-48 166
MS.gene02089.t1 MTR_4g132110 33.766 308 189 6 33 333 35 334 2.97e-46 160
MS.gene02089.t1 MTR_2g008160 45.977 174 90 3 26 199 20 189 6.36e-46 155
MS.gene02089.t1 MTR_5g074700 40.851 235 113 6 103 334 5 216 3.44e-45 154
MS.gene02089.t1 MTR_3g072210 44.271 192 97 5 142 332 56 238 1.00e-43 151
MS.gene02089.t1 MTR_1g066380 34.866 261 160 4 74 332 3 255 7.54e-40 141
MS.gene02089.t1 MTR_3g105790 37.083 240 146 3 97 334 12 248 4.34e-37 134
MS.gene02089.t1 MTR_7g072490 37.200 250 93 4 76 325 2 187 5.06e-37 132
MS.gene02089.t1 MTR_3g072260 53.636 110 51 0 29 138 25 134 1.50e-34 124
MS.gene02089.t1 MTR_2g029930 55.357 112 22 3 15 112 4 101 1.52e-30 112
MS.gene02089.t1 MTR_2g078560 32.018 228 119 5 136 331 96 319 1.22e-26 108
MS.gene02089.t1 MTR_2g077980 31.655 278 143 10 92 329 11 281 5.49e-26 105
MS.gene02089.t1 MTR_5g058120 37.805 164 88 3 165 328 6 155 5.00e-24 99.8
MS.gene02089.t1 MTR_3g462850 37.063 143 86 4 194 333 9 150 4.12e-23 94.4
MS.gene02089.t1 MTR_7g086790 31.217 189 107 4 77 265 17 182 1.35e-20 88.6
MS.gene02089.t1 MTR_1g098320 50.000 82 39 1 251 332 45 124 1.84e-20 86.7
MS.gene02089.t1 MTR_1g089005 37.405 131 68 3 15 139 7 129 6.18e-18 80.1
MS.gene02089.t1 MTR_4g114220 49.367 79 30 2 56 134 29 97 9.01e-17 76.6
MS.gene02089.t1 MTR_4g012865 45.070 71 39 0 27 97 74 144 1.47e-16 76.3
MS.gene02089.t1 MTR_4g031040 32.955 176 73 4 89 264 1 131 2.06e-15 72.8
MS.gene02089.t1 MTR_5g074770 41.379 87 50 1 245 331 23 108 2.51e-15 71.6
MS.gene02089.t1 MTR_6g048160 50.704 71 31 2 69 139 22 88 9.11e-15 69.7
MS.gene02089.t1 MTR_7g086810 30.579 121 58 1 28 148 4 98 9.15e-12 64.7
MS.gene02089.t1 MTR_7g107500 44.737 76 39 2 257 332 25 97 1.61e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02089.t1 AT5G06730 58.282 326 135 1 15 340 18 342 4.27e-131 379
MS.gene02089.t1 AT5G06720 58.491 318 131 1 15 332 17 333 1.69e-127 369
MS.gene02089.t1 AT2G38380 55.183 328 140 3 26 352 27 348 1.87e-124 362
MS.gene02089.t1 AT2G38390 52.744 328 148 3 26 352 27 348 1.67e-117 344
MS.gene02089.t1 AT3G32980 54.545 319 142 3 26 342 27 344 9.36e-117 342
MS.gene02089.t1 AT3G49120 54.259 317 142 3 26 340 28 343 8.01e-116 340
MS.gene02089.t1 AT4G08770 52.012 323 152 3 26 346 20 341 2.79e-115 338
MS.gene02089.t1 AT3G49110 54.259 317 142 3 26 340 29 344 4.68e-115 338
MS.gene02089.t1 AT4G08780 51.084 323 155 3 26 346 20 341 1.01e-112 332
MS.gene02089.t1 AT5G66390 45.672 335 177 3 1 332 1 333 7.30e-100 298
MS.gene02089.t1 AT2G18150 49.164 299 150 2 34 332 40 336 1.74e-98 295
MS.gene02089.t1 AT5G19880 50.159 315 151 5 22 332 17 329 5.35e-98 293
MS.gene02089.t1 AT2G18140 49.000 300 151 2 33 332 38 335 7.64e-98 293
MS.gene02089.t1 AT4G36430 47.573 309 160 2 25 333 25 331 1.12e-97 293
MS.gene02089.t1 AT5G19890 51.948 308 137 6 28 332 28 327 6.11e-97 291
MS.gene02089.t1 AT1G44970 45.938 320 164 2 21 332 28 346 1.43e-95 288
MS.gene02089.t1 AT3G50990 49.026 308 155 2 25 332 36 341 4.42e-95 286
MS.gene02089.t1 AT5G05340 48.366 306 148 3 28 332 28 324 7.53e-94 283
MS.gene02089.t1 AT1G49570 45.902 305 161 2 28 330 46 348 8.48e-93 281
MS.gene02089.t1 AT1G14550 47.557 307 152 4 27 332 23 321 8.98e-93 280
MS.gene02089.t1 AT1G68850 45.779 308 162 5 30 333 30 336 1.30e-91 278
MS.gene02089.t1 AT1G14540 46.296 324 156 5 9 332 10 315 6.69e-89 270
MS.gene02089.t1 AT4G16270 45.066 304 161 5 30 332 50 348 2.46e-87 267
MS.gene02089.t1 AT5G58390 46.278 309 155 4 26 332 17 316 2.87e-86 263
MS.gene02089.t1 AT1G71695 45.652 322 163 6 30 349 44 355 1.00e-85 263
MS.gene02089.t1 AT2G22420 42.202 327 176 4 6 332 6 319 4.53e-83 255
MS.gene02089.t1 AT2G35380 45.768 319 164 5 18 332 22 335 7.95e-83 255
MS.gene02089.t1 AT5G58400 43.887 319 165 5 16 332 19 325 8.61e-81 249
MS.gene02089.t1 AT3G21770 45.192 312 164 6 19 328 18 324 1.18e-80 249
MS.gene02089.t1 AT2G41480 43.519 324 166 8 15 332 16 328 1.51e-79 246
MS.gene02089.t1 AT1G05260 43.182 308 168 6 28 333 24 326 2.80e-79 246
MS.gene02089.t1 AT4G11290 42.284 324 181 5 11 332 7 326 3.96e-78 243
MS.gene02089.t1 AT5G17820 40.867 323 177 6 10 332 5 313 9.85e-78 241
MS.gene02089.t1 AT3G03670 40.491 326 189 4 7 332 1 321 3.29e-77 240
MS.gene02089.t1 AT5G17820 40.867 323 177 6 10 332 58 366 1.72e-76 240
MS.gene02089.t1 AT5G51890 40.777 309 173 5 26 332 22 322 5.88e-75 234
MS.gene02089.t1 AT5G64120 43.144 299 161 6 34 332 39 328 9.74e-75 234
MS.gene02089.t1 AT5G15180 39.458 332 193 5 1 332 6 329 1.05e-74 234
MS.gene02089.t1 AT3G01190 39.815 324 186 6 9 332 7 321 2.43e-74 233
MS.gene02089.t1 AT4G25980 40.367 327 179 7 11 332 11 326 1.16e-73 231
MS.gene02089.t1 AT2G18980 42.857 322 172 6 15 332 10 323 1.84e-73 231
MS.gene02089.t1 AT4G30170 42.258 310 167 6 27 332 24 325 1.53e-71 226
MS.gene02089.t1 AT4G37530 41.479 311 174 5 26 332 23 329 4.94e-71 224
MS.gene02089.t1 AT5G64110 43.234 303 158 7 34 332 38 330 6.45e-71 224
MS.gene02089.t1 AT1G05240 39.159 309 173 5 30 332 26 325 2.44e-70 223
MS.gene02089.t1 AT1G05250 39.159 309 173 5 30 332 26 325 2.44e-70 223
MS.gene02089.t1 AT5G67400 40.541 333 185 6 9 332 1 329 2.46e-70 223
MS.gene02089.t1 AT5G14130 41.214 313 170 6 25 332 27 330 1.10e-69 221
MS.gene02089.t1 AT5G14130 41.214 313 170 6 25 332 68 371 3.14e-69 221
MS.gene02089.t1 AT5G39580 40.303 330 180 8 4 332 6 319 1.17e-68 218
MS.gene02089.t1 AT3G49960 39.024 328 189 6 9 332 9 329 1.09e-65 211
MS.gene02089.t1 AT4G26010 39.423 312 166 7 25 332 17 309 1.41e-65 210
MS.gene02089.t1 AT5G42180 37.224 317 190 6 15 331 9 316 1.54e-65 210
MS.gene02089.t1 AT4G26010 39.423 312 166 7 25 332 45 337 2.99e-65 210
MS.gene02089.t1 AT4G33420 36.254 331 196 7 2 332 10 325 1.26e-64 208
MS.gene02089.t1 AT4G33870 34.320 338 183 5 27 329 65 398 1.35e-64 210
MS.gene02089.t1 AT4G37520 39.159 309 180 5 28 332 25 329 3.36e-64 207
MS.gene02089.t1 AT1G77100 39.557 316 166 8 26 332 20 319 3.37e-64 207
MS.gene02089.t1 AT4G33420 36.254 331 196 7 2 332 57 372 4.88e-64 208
MS.gene02089.t1 AT4G37520 38.835 309 178 6 28 332 25 326 3.53e-63 204
MS.gene02089.t1 AT2G34060 37.987 308 183 5 27 329 39 343 4.62e-63 204
MS.gene02089.t1 AT5G64100 39.203 301 173 5 33 332 40 331 5.15e-63 204
MS.gene02089.t1 AT2G35380 45.968 248 129 4 89 332 1 247 2.38e-61 197
MS.gene02089.t1 AT5G24070 36.859 312 179 7 29 332 34 335 2.62e-61 200
MS.gene02089.t1 AT5G40150 36.306 314 184 4 24 332 26 328 4.77e-61 199
MS.gene02089.t1 AT3G28200 36.102 313 183 5 25 332 16 316 7.95e-61 198
MS.gene02089.t1 AT2G39040 39.103 312 180 7 27 332 43 350 8.18e-61 199
MS.gene02089.t1 AT4G37530 41.923 260 147 3 26 282 23 281 2.12e-59 193
MS.gene02089.t1 AT4G17690 36.570 309 186 4 30 336 26 326 2.35e-59 194
MS.gene02089.t1 AT1G30870 36.482 307 181 6 30 333 51 346 6.81e-59 194
MS.gene02089.t1 AT4G31760 35.030 334 207 5 1 332 1 326 2.59e-58 192
MS.gene02089.t1 AT2G43480 33.528 343 203 8 7 332 1 335 1.89e-57 190
MS.gene02089.t1 AT5G47000 35.691 311 191 4 28 336 31 334 4.42e-57 189
MS.gene02089.t1 AT2G24800 37.134 307 185 3 28 332 29 329 4.88e-57 188
MS.gene02089.t1 AT1G24110 35.692 325 199 7 11 332 5 322 1.17e-56 187
MS.gene02089.t1 AT1G34510 35.621 306 180 6 28 332 20 309 2.68e-56 186
MS.gene02089.t1 AT5G22410 35.938 320 186 9 17 329 15 322 4.56e-56 186
MS.gene02089.t1 AT3G17070 34.615 338 202 7 3 332 13 339 1.96e-53 179
MS.gene02089.t1 AT4G21960 34.426 305 186 5 33 333 34 328 3.97e-51 173
MS.gene02089.t1 AT2G37130 33.657 309 194 5 27 332 27 327 6.14e-48 165
MS.gene02089.t1 AT2G37130 33.663 303 190 5 33 332 2 296 2.71e-46 159
MS.gene02089.t1 AT4G25980 45.930 172 89 3 26 197 67 234 2.87e-45 157
MS.gene02089.t1 AT5G39580 38.983 236 122 6 4 232 6 226 4.77e-40 141
MS.gene02089.t1 AT3G17070 34.201 269 159 7 72 332 18 276 4.67e-37 135
MS.gene02089.t1 AT2G24800 39.286 168 98 1 28 195 29 192 9.68e-33 122

Find 72 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGATCTTGTTGCACTTTC+AGG 0.138143 2.2:+58007234 MS.gene02089:CDS
CCTCTTATTGAGTTGTTATT+TGG 0.142819 2.2:-58005757 None:intergenic
TAAGGCCTCCATGATTAAAA+TGG 0.159041 2.2:+58007798 MS.gene02089:CDS
ACCATCTTCTGATGAATCTT+TGG 0.276196 2.2:-58007908 None:intergenic
TGCTAATGTTTCATCTGTTC+TGG 0.284007 2.2:+58005864 MS.gene02089:CDS
AGCTACCAACCTCACCAATT+TGG 0.295237 2.2:+58007612 MS.gene02089:CDS
AAACTATCTCTTCTTCCTAA+TGG 0.298706 2.2:-58007114 None:intergenic
ATAATCGATCAACGAATAAA+AGG 0.305907 2.2:-58007498 None:intergenic
GTAGCTTGATTGCCAATATC+AGG 0.313736 2.2:-58007595 None:intergenic
CCAAATAACAACTCAATAAG+AGG 0.334119 2.2:+58005757 MS.gene02089:CDS
GTATGCTTGCCAGTTTCATT+AGG 0.349331 2.2:+58005378 MS.gene02089:CDS
ACTTGATGCTAACTTCTATA+AGG 0.356786 2.2:+58005289 MS.gene02089:CDS
CGAGCAATATGCCCTGATAT+TGG 0.357897 2.2:+58007583 MS.gene02089:CDS
TTAATTCAGTAAGATTAAAT+CGG 0.360125 2.2:-58007179 None:intergenic
CACAGGCCTTTGGTCCAGAT+TGG 0.368889 2.2:+58007085 MS.gene02089:intron
AAAACCTCATTTCTTAATCA+AGG 0.380354 2.2:+58007201 MS.gene02089:CDS
CTTGCTAATTCAAACCTTCC+TGG 0.385977 2.2:+58007153 MS.gene02089:CDS
TGAACAATGGAAGTGACATT+TGG 0.393841 2.2:-58005320 None:intergenic
TCGAATCTCCAAGTTGGAAA+TGG 0.398140 2.2:+58007673 MS.gene02089:CDS
TAACAACTCAATAAGAGGTT+TGG 0.401893 2.2:+58005762 MS.gene02089:CDS
AAAGTGAAGCCTAATGAAAC+TGG 0.404928 2.2:-58005387 None:intergenic
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2.2:+58005239 MS.gene02089:CDS
TAGTTTGAGTCGAATGCATC+GGG 0.422778 2.2:-58007646 None:intergenic
CCAGATTGGGAAGTTCCATT+AGG 0.427517 2.2:+58007099 MS.gene02089:CDS
TAATTCAGTAAGATTAAATC+GGG 0.430892 2.2:-58007178 None:intergenic
CCTAATGGAACTTCCCAATC+TGG 0.431657 2.2:-58007099 None:intergenic
TGACATAATTCACAGGCCTT+TGG 0.434450 2.2:+58007075 MS.gene02089:intron
GTTGTGTTAAGAGTTGGATC+TGG 0.434465 2.2:-58007544 None:intergenic
AAGGCCTCCATGATTAAAAT+GGG 0.443699 2.2:+58007799 MS.gene02089:CDS
GAAACAAACCATTTCCAACT+TGG 0.447818 2.2:-58007681 None:intergenic
AGTAAGGTTGTGTTAAGAGT+TGG 0.451448 2.2:-58007550 None:intergenic
TGATGAATCTTTGGTGACTT+TGG 0.453307 2.2:-58007899 None:intergenic
GGTAATGTTGGAGTGTTAAC+TGG 0.454904 2.2:+58007820 MS.gene02089:CDS
ACAGGCCTTTGGTCCAGATT+GGG 0.465142 2.2:+58007086 MS.gene02089:intron
TGCTCGCAATGATTGTAGTA+AGG 0.467866 2.2:-58007566 None:intergenic
TGTGTAGTGGTTGTGCTTGG+AGG 0.472368 2.2:+58005242 MS.gene02089:CDS
TGTGCTGATATTCTTGCACT+TGG 0.484999 2.2:+58005841 MS.gene02089:CDS
ATGATTAAAATGGGTAATGT+TGG 0.485132 2.2:+58007808 MS.gene02089:CDS
TTGTGTTAAGAGTTGGATCT+GGG 0.485792 2.2:-58007543 None:intergenic
GTGTAGTGGTTGTGCTTGGA+GGG 0.502187 2.2:+58005243 MS.gene02089:CDS
AAAGCTATTGACAATGTCAA+TGG 0.511312 2.2:-58007743 None:intergenic
TACGTCCAAATTGGTGAGGT+TGG 0.516617 2.2:-58007617 None:intergenic
CTTTGGTGACTTTGGTAGCA+AGG 0.519220 2.2:-58007891 None:intergenic
AGCAGCTTTGTGCTGTGTAG+TGG 0.540972 2.2:+58005229 MS.gene02089:CDS
AATGGTATCAGCACCAGTTG+TGG 0.543672 2.2:-58007725 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.544272 2.2:-58005270 None:intergenic
AGTTGTGCATTTGAAGAGAA+GGG 0.549134 2.2:-58005269 None:intergenic
ACCAAAGATTCATCAGAAGA+TGG 0.551368 2.2:+58007907 MS.gene02089:CDS
GGTGCTCATACGATTGGAAG+AGG 0.553044 2.2:+58007469 MS.gene02089:intron
TACTACTCGAATCTCCAAGT+TGG 0.554326 2.2:+58007667 MS.gene02089:CDS
GAGACCTTGATTAAGAAATG+AGG 0.564227 2.2:-58007205 None:intergenic
TGTTTATGAAAGGGTTGTGA+TGG 0.564252 2.2:+58005682 MS.gene02089:intron
GATACTATCGTGAGTGAGCA+AGG 0.565390 2.2:+58005727 MS.gene02089:CDS
GTAAGATTAAATCGGGGACC+AGG 0.567908 2.2:-58007171 None:intergenic
AACTTCCCAATCTGGACCAA+AGG 0.572189 2.2:-58007091 None:intergenic
ATGAAACTGGCAAGCATACG+AGG 0.572572 2.2:-58005374 None:intergenic
GTAGTTTGAGTCGAATGCAT+CGG 0.574576 2.2:-58007647 None:intergenic
TGCTAAGACACTTTGAACAA+TGG 0.585377 2.2:-58005333 None:intergenic
TGCTTACGTCCAAATTGGTG+AGG 0.594113 2.2:-58007621 None:intergenic
TAGCTTGATTGCCAATATCA+GGG 0.597537 2.2:-58007594 None:intergenic
GATTAAATCGGGGACCAGGA+AGG 0.614479 2.2:-58007167 None:intergenic
TTATACAATTTCAGCAACAC+AGG 0.626417 2.2:+58007517 MS.gene02089:CDS
TAATCAAGGTCTCAACACTA+CGG 0.635610 2.2:+58007215 MS.gene02089:CDS
TCAGCACAAGACACAACACT+AGG 0.664175 2.2:-58005826 None:intergenic
GGAGTGTTAACTGGTACTCA+AGG 0.670485 2.2:+58007829 MS.gene02089:CDS
TGAAACTGGCAAGCATACGA+GGG 0.671256 2.2:-58005373 None:intergenic
GTTTGAGTCGAATGCATCGG+GGG 0.672996 2.2:-58007644 None:intergenic
TGTGTTAAGAGTTGGATCTG+GGG 0.681511 2.2:-58007542 None:intergenic
AATTCAGTAAGATTAAATCG+GGG 0.694375 2.2:-58007177 None:intergenic
TGTGAATCAAATCAAAGCCG+CGG 0.705504 2.2:+58005789 MS.gene02089:CDS
AGGACAAGCAAGTTCGACCG+CGG 0.728527 2.2:-58005806 None:intergenic
AGTTTGAGTCGAATGCATCG+GGG 0.731684 2.2:-58007645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAACAAAATAACTTA+AGG - chr2.2:58006736-58006755 None:intergenic 10.0%
!! GAAAAAAATAGTTTATTAAA+AGG - chr2.2:58006942-58006961 None:intergenic 10.0%
!! TAAAAAATAGTATATTTACA+CGG - chr2.2:58006764-58006783 None:intergenic 10.0%
!!! ATAATATGAATAAATTTTGT+AGG - chr2.2:58006815-58006834 None:intergenic 10.0%
!!! ATTTTAAATTTTTTATAACC+TGG - chr2.2:58007382-58007401 None:intergenic 10.0%
!!! TAATATGAATAAATTTTGTA+GGG - chr2.2:58006814-58006833 None:intergenic 10.0%
!! AAATATAAACAAATAGTGTT+TGG + chr2.2:58006342-58006361 MS.gene02089:intron 15.0%
!! AATATAAACAAATAGTGTTT+GGG + chr2.2:58006343-58006362 MS.gene02089:intron 15.0%
!! ACAGTTATTATTAAAACTTA+TGG - chr2.2:58005946-58005965 None:intergenic 15.0%
!! TAAATGTTTAAATATCCAAA+TGG + chr2.2:58006677-58006696 MS.gene02089:intron 15.0%
!! TATAAAAGATCTAATTAACT+TGG - chr2.2:58005593-58005612 None:intergenic 15.0%
!! TATTAAAAGGAATTAAACAA+AGG - chr2.2:58006929-58006948 None:intergenic 15.0%
!! TTAATTCAGTAAGATTAAAT+CGG - chr2.2:58007182-58007201 None:intergenic 15.0%
!!! ATAGGATTTTTTTTTTTTGA+AGG + chr2.2:58006863-58006882 MS.gene02089:intron 15.0%
!!! ATTGAATTTTGTAAGTAAAA+AGG - chr2.2:58006021-58006040 None:intergenic 15.0%
!!! TTGAATTTTGTAAGTAAAAA+GGG - chr2.2:58006020-58006039 None:intergenic 15.0%
!!! TTTTAAAATTAACAGAAACA+TGG - chr2.2:58006159-58006178 None:intergenic 15.0%
!! AAAAAAGGAAAATTCTACTA+TGG + chr2.2:58006315-58006334 MS.gene02089:intron 20.0%
!! AAACATAAATGTATAGTGTT+TGG - chr2.2:58006464-58006483 None:intergenic 20.0%
!! ATCTTTGATCAAATAATCAA+GGG + chr2.2:58006578-58006597 MS.gene02089:intron 20.0%
!! TAATTCAGTAAGATTAAATC+GGG - chr2.2:58007181-58007200 None:intergenic 20.0%
!! TAGGGAATAACAAAAAAATA+AGG - chr2.2:58006796-58006815 None:intergenic 20.0%
!! TATATATGTACACAAAACAT+CGG + chr2.2:58007282-58007301 MS.gene02089:intron 20.0%
!! TGATATCTATGTTTATGAAA+GGG + chr2.2:58005673-58005692 MS.gene02089:intron 20.0%
!! TTGATATCTATGTTTATGAA+AGG + chr2.2:58005672-58005691 MS.gene02089:intron 20.0%
!!! AAACAAAGGCATTTTTTTTA+AGG - chr2.2:58006915-58006934 None:intergenic 20.0%
!!! CATTTTATATTTTTTTCTCG+AGG - chr2.2:58006504-58006523 None:intergenic 20.0%
!!! GTGTACATATATAGTTTTTA+AGG - chr2.2:58007275-58007294 None:intergenic 20.0%
!!! TATATGCTTTGATCATTTTT+AGG + chr2.2:58007448-58007467 MS.gene02089:intron 20.0%
!!! TGATTGATCTTTTTCTATTT+AGG - chr2.2:58006641-58006660 None:intergenic 20.0%
!!! TTTTTTTGAAGGAATCTAAT+AGG + chr2.2:58006874-58006893 MS.gene02089:intron 20.0%
! AAAACCTCATTTCTTAATCA+AGG + chr2.2:58007201-58007220 MS.gene02089:CDS 25.0%
! AATTCAGTAAGATTAAATCG+GGG - chr2.2:58007180-58007199 None:intergenic 25.0%
! ACTTGGCATAGTTAAATTTA+CGG - chr2.2:58005576-58005595 None:intergenic 25.0%
! ATAATCGATCAACGAATAAA+AGG - chr2.2:58007501-58007520 None:intergenic 25.0%
! ATGATTAAAATGGGTAATGT+TGG + chr2.2:58007808-58007827 MS.gene02089:CDS 25.0%
! CATCTTTGATCAAATAATCA+AGG + chr2.2:58006577-58006596 MS.gene02089:intron 25.0%
! CTTGATTATTTGATCAAAGA+TGG - chr2.2:58006579-58006598 None:intergenic 25.0%
!! AAATGTCCACATGATTTTTA+AGG - chr2.2:58007331-58007350 None:intergenic 25.0%
!!! AACATTACCCATTTTAATCA+TGG - chr2.2:58007809-58007828 None:intergenic 25.0%
!!! ATTTTTAAGGACACACATAT+AGG - chr2.2:58007318-58007337 None:intergenic 25.0%
!!! TCTTTTCTTTGAAGCTTTTA+AGG + chr2.2:58007780-58007799 MS.gene02089:CDS 25.0%
AAACTATCTCTTCTTCCTAA+TGG - chr2.2:58007117-58007136 None:intergenic 30.0%
AAAGCTATTGACAATGTCAA+TGG - chr2.2:58007746-58007765 None:intergenic 30.0%
ACTTGATGCTAACTTCTATA+AGG + chr2.2:58005289-58005308 MS.gene02089:CDS 30.0%
ATTATTTGATCAAAGATGGC+CGG - chr2.2:58006575-58006594 None:intergenic 30.0%
CCAAATAACAACTCAATAAG+AGG + chr2.2:58005757-58005776 MS.gene02089:CDS 30.0%
CTCTCAAGATAAAGTCTAAT+AGG + chr2.2:58006845-58006864 MS.gene02089:intron 30.0%
TAAAGAAAGAACAATGAGCA+TGG - chr2.2:58006084-58006103 None:intergenic 30.0%
TAACAACTCAATAAGAGGTT+TGG + chr2.2:58005762-58005781 MS.gene02089:CDS 30.0%
TAGGAAATGTGAATATGTAG+AGG - chr2.2:58005902-58005921 None:intergenic 30.0%
TCCAAAACTTAGTTAGATGT+TGG - chr2.2:58005634-58005653 None:intergenic 30.0%
TGATCAAATAATCAAGGGTT+GGG + chr2.2:58006583-58006602 MS.gene02089:intron 30.0%
TTATACAATTTCAGCAACAC+AGG + chr2.2:58007517-58007536 MS.gene02089:CDS 30.0%
TTGATCAAATAATCAAGGGT+TGG + chr2.2:58006582-58006601 MS.gene02089:intron 30.0%
! ACCAACATCTAACTAAGTTT+TGG + chr2.2:58005630-58005649 MS.gene02089:intron 30.0%
! ACTATTCTAGGAGAGAAAAA+AGG + chr2.2:58006300-58006319 MS.gene02089:intron 30.0%
! CCTCTTATTGAGTTGTTATT+TGG - chr2.2:58005760-58005779 None:intergenic 30.0%
! TGATTAATAGTCTTACCGTT+AGG + chr2.2:58006054-58006073 MS.gene02089:intron 30.0%
! TTTTTCTCTCCTAGAATAGT+GGG - chr2.2:58006300-58006319 None:intergenic 30.0%
!! ATTACCCATTTTAATCATGG+AGG - chr2.2:58007806-58007825 None:intergenic 30.0%
!!! TTTTTTCTCTCCTAGAATAG+TGG - chr2.2:58006301-58006320 None:intergenic 30.0%
AAAACTTATGGAGTCGTCTT+AGG - chr2.2:58005934-58005953 None:intergenic 35.0%
AAAGTGAAGCCTAATGAAAC+TGG - chr2.2:58005390-58005409 None:intergenic 35.0%
AAGGCCTCCATGATTAAAAT+GGG + chr2.2:58007799-58007818 MS.gene02089:CDS 35.0%
AAGTTGTGCATTTGAAGAGA+AGG - chr2.2:58005273-58005292 None:intergenic 35.0%
ACCAAAGATTCATCAGAAGA+TGG + chr2.2:58007907-58007926 MS.gene02089:CDS 35.0%
ACCATCTTCTGATGAATCTT+TGG - chr2.2:58007911-58007930 None:intergenic 35.0%
AGTAAGGTTGTGTTAAGAGT+TGG - chr2.2:58007553-58007572 None:intergenic 35.0%
AGTTGTGCATTTGAAGAGAA+GGG - chr2.2:58005272-58005291 None:intergenic 35.0%
AGTTTAAATCTCCTCGGAAA+CGG - chr2.2:58007359-58007378 None:intergenic 35.0%
ATGTGAATATGTAGAGGATG+TGG - chr2.2:58005896-58005915 None:intergenic 35.0%
CTCATGTGGAAAGAACAAAT+AGG - chr2.2:58005997-58006016 None:intergenic 35.0%
GAAACAAACCATTTCCAACT+TGG - chr2.2:58007684-58007703 None:intergenic 35.0%
GAGACCTTGATTAAGAAATG+AGG - chr2.2:58007208-58007227 None:intergenic 35.0%
GAGCTGATAACTTATTATGC+AGG + chr2.2:58007406-58007425 MS.gene02089:intron 35.0%
GTGTGTCCTTAAAAATCATG+TGG + chr2.2:58007322-58007341 MS.gene02089:intron 35.0%
TAAGGCCTCCATGATTAAAA+TGG + chr2.2:58007798-58007817 MS.gene02089:CDS 35.0%
TAATCAAGGTCTCAACACTA+CGG + chr2.2:58007215-58007234 MS.gene02089:CDS 35.0%
TAGCTTGATTGCCAATATCA+GGG - chr2.2:58007597-58007616 None:intergenic 35.0%
TCAAAACCATTGACATTTGC+AGG - chr2.2:58006705-58006724 None:intergenic 35.0%
TCGTCTTAGGAATGAGATAT+AGG - chr2.2:58005921-58005940 None:intergenic 35.0%
TGAACAATGGAAGTGACATT+TGG - chr2.2:58005323-58005342 None:intergenic 35.0%
TGATTCTATCAAACTCGTTG+TGG - chr2.2:58005478-58005497 None:intergenic 35.0%
TGCTAAGACACTTTGAACAA+TGG - chr2.2:58005336-58005355 None:intergenic 35.0%
TGCTAATGTTTCATCTGTTC+TGG + chr2.2:58005864-58005883 MS.gene02089:CDS 35.0%
TGTTTATGAAAGGGTTGTGA+TGG + chr2.2:58005682-58005701 MS.gene02089:intron 35.0%
TTGTGTTAAGAGTTGGATCT+GGG - chr2.2:58007546-58007565 None:intergenic 35.0%
! TACTTGTGTCTCAATTTTCC+TGG + chr2.2:58007052-58007071 MS.gene02089:intron 35.0%
! TGATGAATCTTTGGTGACTT+TGG - chr2.2:58007902-58007921 None:intergenic 35.0%
! TTCTCGAGGTATTCTTACAT+GGG - chr2.2:58006490-58006509 None:intergenic 35.0%
! TTTCTCGAGGTATTCTTACA+TGG - chr2.2:58006491-58006510 None:intergenic 35.0%
!! CTTTCTAGCTACTTATCAGA+TGG - chr2.2:58006612-58006631 None:intergenic 35.0%
!!! TTTTTAGGTGCTCATACGAT+TGG + chr2.2:58007463-58007482 MS.gene02089:intron 35.0%
AATGAGCATGGTTGACCTAA+CGG - chr2.2:58006072-58006091 None:intergenic 40.0%
ACCTGGAGTTTAAATCTCCT+CGG - chr2.2:58007365-58007384 None:intergenic 40.0%
AGCAATGAAAGTCTCTTAGC+CGG + chr2.2:58006553-58006572 MS.gene02089:intron 40.0%
ATGGTACCTGCAAATGTCAA+TGG + chr2.2:58006696-58006715 MS.gene02089:intron 40.0%
CTTGCTAATTCAAACCTTCC+TGG + chr2.2:58007153-58007172 MS.gene02089:CDS 40.0%
GTAAGTAAAAAGGGCTCATG+TGG - chr2.2:58006011-58006030 None:intergenic 40.0%
GTAGCTTGATTGCCAATATC+AGG - chr2.2:58007598-58007617 None:intergenic 40.0%
GTAGTTTGAGTCGAATGCAT+CGG - chr2.2:58007650-58007669 None:intergenic 40.0%
GTATGCTTGCCAGTTTCATT+AGG + chr2.2:58005378-58005397 MS.gene02089:CDS 40.0%
GTTGTGTTAAGAGTTGGATC+TGG - chr2.2:58007547-58007566 None:intergenic 40.0%
TACTACTCGAATCTCCAAGT+TGG + chr2.2:58007667-58007686 MS.gene02089:CDS 40.0%
TAGTTTGAGTCGAATGCATC+GGG - chr2.2:58007649-58007668 None:intergenic 40.0%
TGACATAATTCACAGGCCTT+TGG + chr2.2:58007075-58007094 MS.gene02089:intron 40.0%
TGACATTTGCAGGTACCATT+TGG - chr2.2:58006695-58006714 None:intergenic 40.0%
TGCTCGCAATGATTGTAGTA+AGG - chr2.2:58007569-58007588 None:intergenic 40.0%
TGTGAATCAAATCAAAGCCG+CGG + chr2.2:58005789-58005808 MS.gene02089:CDS 40.0%
TGTGTTAAGAGTTGGATCTG+GGG - chr2.2:58007545-58007564 None:intergenic 40.0%
TTCCTGGTGACATAATTCAC+AGG + chr2.2:58007068-58007087 MS.gene02089:intron 40.0%
! ACATTTTACAACCGTTTCCG+AGG + chr2.2:58007345-58007364 MS.gene02089:intron 40.0%
! GGTAATGTTGGAGTGTTAAC+TGG + chr2.2:58007820-58007839 MS.gene02089:CDS 40.0%
! TCGAATCTCCAAGTTGGAAA+TGG + chr2.2:58007673-58007692 MS.gene02089:CDS 40.0%
! TGTGCTGATATTCTTGCACT+TGG + chr2.2:58005841-58005860 MS.gene02089:CDS 40.0%
!!! CAAGAGCTTTTTTCCACAAC+TGG + chr2.2:58007712-58007731 MS.gene02089:CDS 40.0%
AACTTCCCAATCTGGACCAA+AGG - chr2.2:58007094-58007113 None:intergenic 45.0%
AATGGTATCAGCACCAGTTG+TGG - chr2.2:58007728-58007747 None:intergenic 45.0%
ACGGATCTTGTTGCACTTTC+AGG + chr2.2:58007234-58007253 MS.gene02089:CDS 45.0%
AGCTACCAACCTCACCAATT+TGG + chr2.2:58007612-58007631 MS.gene02089:CDS 45.0%
AGTTTGAGTCGAATGCATCG+GGG - chr2.2:58007648-58007667 None:intergenic 45.0%
ATGAAACTGGCAAGCATACG+AGG - chr2.2:58005377-58005396 None:intergenic 45.0%
CCAGATTGGGAAGTTCCATT+AGG + chr2.2:58007099-58007118 MS.gene02089:CDS 45.0%
CCTAATGGAACTTCCCAATC+TGG - chr2.2:58007102-58007121 None:intergenic 45.0%
CGAGCAATATGCCCTGATAT+TGG + chr2.2:58007583-58007602 MS.gene02089:CDS 45.0%
GATACTATCGTGAGTGAGCA+AGG + chr2.2:58005727-58005746 MS.gene02089:CDS 45.0%
GTAAGATTAAATCGGGGACC+AGG - chr2.2:58007174-58007193 None:intergenic 45.0%
TACGTCCAAATTGGTGAGGT+TGG - chr2.2:58007620-58007639 None:intergenic 45.0%
TCAGCACAAGACACAACACT+AGG - chr2.2:58005829-58005848 None:intergenic 45.0%
TCCGAGGAGATTTAAACTCC+AGG + chr2.2:58007361-58007380 MS.gene02089:intron 45.0%
TGAAACTGGCAAGCATACGA+GGG - chr2.2:58005376-58005395 None:intergenic 45.0%
TGCTTACGTCCAAATTGGTG+AGG - chr2.2:58007624-58007643 None:intergenic 45.0%
! CTTTGGTGACTTTGGTAGCA+AGG - chr2.2:58007894-58007913 None:intergenic 45.0%
! GGAGTGTTAACTGGTACTCA+AGG + chr2.2:58007829-58007848 MS.gene02089:CDS 45.0%
ACAGGCCTTTGGTCCAGATT+GGG + chr2.2:58007086-58007105 MS.gene02089:intron 50.0%
GATTAAATCGGGGACCAGGA+AGG - chr2.2:58007170-58007189 None:intergenic 50.0%
GGCCTGTGAATTATGTCACC+AGG - chr2.2:58007073-58007092 None:intergenic 50.0%
GGTGCTCATACGATTGGAAG+AGG + chr2.2:58007469-58007488 MS.gene02089:intron 50.0%
GTGTAGTGGTTGTGCTTGGA+GGG + chr2.2:58005243-58005262 MS.gene02089:CDS 50.0%
GTTTGAGTCGAATGCATCGG+GGG - chr2.2:58007647-58007666 None:intergenic 50.0%
TCGAACCTGCCCACTATTCT+AGG + chr2.2:58006288-58006307 MS.gene02089:intron 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG + chr2.2:58005239-58005258 MS.gene02089:CDS 50.0%
TGTGTAGTGGTTGTGCTTGG+AGG + chr2.2:58005242-58005261 MS.gene02089:CDS 50.0%
! AGCAGCTTTGTGCTGTGTAG+TGG + chr2.2:58005229-58005248 MS.gene02089:CDS 50.0%
!! TCTCTCCTAGAATAGTGGGC+AGG - chr2.2:58006296-58006315 None:intergenic 50.0%
AGGACAAGCAAGTTCGACCG+CGG - chr2.2:58005809-58005828 None:intergenic 55.0%
CACAGGCCTTTGGTCCAGAT+TGG + chr2.2:58007085-58007104 MS.gene02089:intron 55.0%
!! GGGGGTGCTTACGTCCAAAT+TGG - chr2.2:58007629-58007648 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58005203 58007948 58005203 ID=MS.gene02089
chr2.2 mRNA 58005203 58007948 58005203 ID=MS.gene02089.t1;Parent=MS.gene02089
chr2.2 exon 58005203 58005427 58005203 ID=MS.gene02089.t1.exon1;Parent=MS.gene02089.t1
chr2.2 CDS 58005203 58005427 58005203 ID=cds.MS.gene02089.t1;Parent=MS.gene02089.t1
chr2.2 exon 58005694 58005885 58005694 ID=MS.gene02089.t1.exon2;Parent=MS.gene02089.t1
chr2.2 CDS 58005694 58005885 58005694 ID=cds.MS.gene02089.t1;Parent=MS.gene02089.t1
chr2.2 exon 58007090 58007255 58007090 ID=MS.gene02089.t1.exon3;Parent=MS.gene02089.t1
chr2.2 CDS 58007090 58007255 58007090 ID=cds.MS.gene02089.t1;Parent=MS.gene02089.t1
chr2.2 exon 58007470 58007948 58007470 ID=MS.gene02089.t1.exon4;Parent=MS.gene02089.t1
chr2.2 CDS 58007470 58007948 58007470 ID=cds.MS.gene02089.t1;Parent=MS.gene02089.t1
Gene Sequence

>MS.gene02089

ATGAACTCTTCTTTTCATCTCACATTAGCAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTTCCCTTCTCTTCAAATGCACAACTTGATGCTAACTTCTATAAGGACACTTGTCCAAATGTCACTTCCATTGTTCAAAGTGTCTTAGCAAATGTTTCTCAGACAGACCCTCGTATGCTTGCCAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGTATGTATTATAGTATAAATTATAATAGTGATGTGATTTTGTTGAAGCCACAACGAGTTTGATAGAATCACAAAGCACATGTGATTTTGTTGAAAGTTGATAGTATCAAACTACAGTGTGTTACTACGTGATTTTATCAAACTCACCGTAAATTTAACTATGCCAAGTTAATTAGATCTTTTATAGTCAACTCAATTTTCTCACCAACATCTAACTAAGTTTTGGATATTTGTAACTCATATATTTGATATCTATGTTTATGAAAGGGTTGTGATGGATCACTCTTGTTGAATGACACTGATACTATCGTGAGTGAGCAAGGAGCTTTGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAGCCGCGGTCGAACTTGCTTGTCCTAGTGTTGTGTCTTGTGCTGATATTCTTGCACTTGGTGCTAATGTTTCATCTGTTCTGGTATGTTCCACATCCTCTACATATTCACATTTCCTATATCTCATTCCTAAGACGACTCCATAAGTTTTAATAATAACTGTGATGTAAAACAAGTTTTAACATATGTAGCCTATTTGTTCTTTCCACATGAGCCCTTTTTACTTACAAAATTCAATAAAAATAACTTTTTGATTAATAGTCTTACCGTTAGGTCAACCATGCTCATTGTTCTTTCTTTATTCTTTATAATGCAAATTGTTCTTTCTTTATGATGAAATGAGAGAAACTTATCCATGTTTCTGTTAATTTTAAAATGCAAATTGTTCTTTGTTTATAACTTTCTTTTGATTTTGTTTTTCATTATCTTTAAAACTTTATCTTATTCAAATTCTAATAGATTAGTCAAAAAAATTATGATCTTCTTCGAACCTGCCCACTATTCTAGGAGAGAAAAAAGGAAAATTCTACTATGGACACAAATATAAACAAATAGTGTTTGGGCACACATACATTAAAATATTTTTTTAATAACAAAAAACAAATTGATAATAAAGTGATTTAATAGTTTGCGAAAAAGAGTTGTGATGTATGTGTGACCAAACACTATACATTTATGTTTGTGCCCATGTAAGAATACCTCGAGAAAAAAATATAAAATGAGTTGATGACTTTGTTAAAACAATTCATTAGCAATGAAAGTCTCTTAGCCGGCCATCTTTGATCAAATAATCAAGGGTTGGGATTCCATCTGATAAGTAGCTAGAAAGTTTCAGCCTAAATAGAAAAAGATCAATCAATTTAAATATATTATTTAAATGTTTAAATATCCAAATGGTACCTGCAAATGTCAATGGTTTTGATTTAAGTTCCTTAAGTTATTTTGTTTTATTTTTAGTCCGTGTAAATATACTATTTTTTAACTTTTGATCCTTATTTTTTTGTTATTCCCTACAAAATTTATTCATATTATCGATTTTAGTCTCTCAAGATAAAGTCTAATAGGATTTTTTTTTTTTGAAGGAATCTAATAGGAATTTTTGACAATTACCTTAAAAAAAATGCCTTTGTTTAATTCCTTTTAATAAACTATTTTTTTCTCACGACTTATTATTATTACTACTACTTGTATGAATTTTTTCTTTTCTTTTTACGTTTTTACTATTATACTAGTGTGAGATTATATTTTTTACTTGTGTCTCAATTTTCCTGGTGACATAATTCACAGGCCTTTGGTCCAGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTGAATGCAAATCAAACTCTTGCTAATTCAAACCTTCCTGGTCCCCGATTTAATCTTACTGAATTAAAAACCTCATTTCTTAATCAAGGTCTCAACACTACGGATCTTGTTGCACTTTCAGGTATAAATCTTTGTCTCCTTAAAAACTATATATGTACACAAAACATCGGTACATATATTCCTATATGTGTGTCCTTAAAAATCATGTGGACATTTTACAACCGTTTCCGAGGAGATTTAAACTCCAGGTTATAAAAAATTTAAAATCATTGAGCTGATAACTTATTATGCAGGTATACTTAGTGTCTAATTGTATATGCTTTGATCATTTTTAGGTGCTCATACGATTGGAAGAGGTGTATGCCTTTTATTCGTTGATCGATTATACAATTTCAGCAACACAGGCGCCCCAGATCCAACTCTTAACACAACCTTACTACAATCATTGCGAGCAATATGCCCTGATATTGGCAATCAAGCTACCAACCTCACCAATTTGGACGTAAGCACCCCCGATGCATTCGACTCAAACTACTACTCGAATCTCCAAGTTGGAAATGGTTTGTTTCAGAGTGATCAAGAGCTTTTTTCCACAACTGGTGCTGATACCATTGACATTGTCAATAGCTTTAGCAGCAATCAAACTCTTTTCTTTGAAGCTTTTAAGGCCTCCATGATTAAAATGGGTAATGTTGGAGTGTTAACTGGTACTCAAGGTGAAGTTAGAACACACTGTAACTTTGTTAATACTGTTAGCCTTGCTACCAAAGTCACCAAAGATTCATCAGAAGATGGTATTGTTAGCTCATTCTAA
Protein sequence

>MS.gene02089.t1

MNSSFHLTLAALCCVVVVLGGFPFSSNAQLDANFYKDTCPNVTSIVQSVLANVSQTDPRMLASFIRLHFHDCFVQGCDGSLLLNDTDTIVSEQGALPNNNSIRGLDVVNQIKAAVELACPSVVSCADILALGANVSSVLAFGPDWEVPLGRRDSLNANQTLANSNLPGPRFNLTELKTSFLNQGLNTTDLVALSGAHTIGRGVCLLFVDRLYNFSNTGAPDPTLNTTLLQSLRAICPDIGNQATNLTNLDVSTPDAFDSNYYSNLQVGNGLFQSDQELFSTTGADTIDIVNSFSSNQTLFFEAFKASMIKMGNVGVLTGTQGEVRTHCNFVNTVSLATKVTKDSSEDGIVSSF