Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02036.t1 | XP_003594466.2 | 91 | 355 | 20 | 1 | 1 | 343 | 1 | 355 | 4.40E-177 | 630.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02036.t1 | Q9LEH3 | 55.8 | 317 | 127 | 2 | 11 | 314 | 7 | 323 | 8.6e-89 | 328.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02036.t1 | G7IJR4 | 91.0 | 355 | 20 | 1 | 1 | 343 | 1 | 355 | 3.2e-177 | 630.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02036.t1 | MTR_2g028980 | 90.986 | 355 | 20 | 1 | 1 | 343 | 1 | 355 | 0.0 | 649 |
MS.gene02036.t1 | MTR_2g029740 | 74.366 | 355 | 79 | 1 | 1 | 343 | 1 | 355 | 0.0 | 541 |
MS.gene02036.t1 | MTR_2g029750 | 73.239 | 355 | 82 | 2 | 1 | 343 | 1 | 354 | 0.0 | 523 |
MS.gene02036.t1 | MTR_2g029815 | 70.423 | 355 | 90 | 2 | 1 | 343 | 1 | 352 | 1.87e-179 | 501 |
MS.gene02036.t1 | MTR_2g029820 | 68.169 | 355 | 101 | 1 | 1 | 343 | 1 | 355 | 1.37e-176 | 494 |
MS.gene02036.t1 | MTR_2g029800 | 68.451 | 355 | 98 | 2 | 1 | 343 | 1 | 353 | 1.11e-175 | 491 |
MS.gene02036.t1 | MTR_2g029830 | 66.667 | 357 | 102 | 3 | 1 | 343 | 1 | 354 | 2.67e-166 | 468 |
MS.gene02036.t1 | MTR_2g029850 | 63.842 | 354 | 113 | 2 | 1 | 342 | 1 | 351 | 1.42e-156 | 443 |
MS.gene02036.t1 | MTR_2g029860 | 63.764 | 356 | 113 | 4 | 1 | 343 | 1 | 353 | 3.98e-154 | 437 |
MS.gene02036.t1 | MTR_2g029910 | 58.924 | 353 | 128 | 3 | 3 | 342 | 4 | 352 | 6.47e-144 | 411 |
MS.gene02036.t1 | MTR_2g029830 | 70.567 | 282 | 71 | 1 | 74 | 343 | 5 | 286 | 8.33e-140 | 398 |
MS.gene02036.t1 | MTR_2g029560 | 59.524 | 336 | 119 | 2 | 1 | 324 | 1 | 331 | 3.58e-139 | 398 |
MS.gene02036.t1 | MTR_2g029730 | 58.457 | 337 | 122 | 3 | 1 | 324 | 1 | 332 | 6.19e-133 | 382 |
MS.gene02036.t1 | MTR_7g093370 | 55.049 | 307 | 125 | 2 | 25 | 318 | 65 | 371 | 5.18e-110 | 325 |
MS.gene02036.t1 | MTR_1g054205 | 50.920 | 326 | 147 | 2 | 6 | 318 | 1 | 326 | 1.72e-108 | 320 |
MS.gene02036.t1 | MTR_5g021060 | 49.329 | 298 | 138 | 2 | 29 | 314 | 30 | 326 | 3.47e-94 | 283 |
MS.gene02036.t1 | MTR_8g076820 | 48.013 | 302 | 144 | 2 | 29 | 318 | 30 | 330 | 1.22e-91 | 277 |
MS.gene02036.t1 | MTR_2g040000 | 48.366 | 306 | 141 | 3 | 28 | 318 | 28 | 331 | 1.69e-90 | 274 |
MS.gene02036.t1 | MTR_4g125940 | 47.130 | 331 | 157 | 4 | 2 | 318 | 3 | 329 | 6.65e-90 | 273 |
MS.gene02036.t1 | MTR_2g084080 | 43.750 | 320 | 159 | 3 | 11 | 318 | 7 | 317 | 3.64e-86 | 263 |
MS.gene02036.t1 | MTR_3g072190 | 46.278 | 309 | 159 | 2 | 11 | 314 | 8 | 314 | 3.88e-86 | 263 |
MS.gene02036.t1 | MTR_5g017860 | 44.062 | 320 | 161 | 5 | 14 | 318 | 10 | 326 | 2.17e-84 | 258 |
MS.gene02036.t1 | MTR_5g017850 | 44.590 | 305 | 153 | 4 | 27 | 318 | 25 | 326 | 5.16e-84 | 257 |
MS.gene02036.t1 | MTR_4g029170 | 45.897 | 329 | 151 | 7 | 1 | 314 | 1 | 317 | 7.67e-84 | 257 |
MS.gene02036.t1 | MTR_5g074760 | 45.860 | 314 | 161 | 5 | 14 | 319 | 10 | 322 | 8.62e-84 | 257 |
MS.gene02036.t1 | MTR_2g084110 | 43.168 | 322 | 162 | 3 | 9 | 318 | 5 | 317 | 1.82e-83 | 256 |
MS.gene02036.t1 | MTR_5g074740 | 45.541 | 314 | 162 | 5 | 14 | 319 | 10 | 322 | 4.06e-83 | 255 |
MS.gene02036.t1 | MTR_3g466200 | 46.965 | 313 | 155 | 6 | 10 | 314 | 7 | 316 | 7.24e-83 | 254 |
MS.gene02036.t1 | MTR_3g094650 | 46.296 | 324 | 147 | 6 | 5 | 314 | 8 | 318 | 8.87e-83 | 254 |
MS.gene02036.t1 | MTR_5g074970 | 45.988 | 324 | 150 | 6 | 7 | 314 | 8 | 322 | 1.05e-82 | 254 |
MS.gene02036.t1 | MTR_4g083710 | 43.202 | 331 | 162 | 6 | 3 | 318 | 5 | 324 | 1.19e-81 | 251 |
MS.gene02036.t1 | MTR_4g029200 | 44.304 | 316 | 153 | 5 | 16 | 318 | 33 | 338 | 4.40e-81 | 250 |
MS.gene02036.t1 | MTR_1g022970 | 45.515 | 301 | 152 | 1 | 29 | 317 | 46 | 346 | 8.72e-81 | 250 |
MS.gene02036.t1 | MTR_4g125940 | 49.818 | 275 | 122 | 3 | 58 | 318 | 2 | 274 | 1.16e-80 | 247 |
MS.gene02036.t1 | MTR_7g072510 | 42.623 | 305 | 154 | 3 | 26 | 318 | 17 | 312 | 1.84e-80 | 248 |
MS.gene02036.t1 | MTR_4g029180 | 47.405 | 289 | 143 | 4 | 33 | 314 | 31 | 317 | 2.89e-80 | 248 |
MS.gene02036.t1 | MTR_5g074710 | 45.048 | 313 | 163 | 5 | 15 | 319 | 11 | 322 | 3.69e-80 | 247 |
MS.gene02036.t1 | MTR_2g084090 | 42.415 | 323 | 164 | 4 | 9 | 318 | 5 | 318 | 1.89e-79 | 245 |
MS.gene02036.t1 | MTR_2g084020 | 43.312 | 314 | 158 | 3 | 17 | 318 | 13 | 318 | 2.76e-79 | 245 |
MS.gene02036.t1 | MTR_5g074860 | 43.252 | 326 | 171 | 5 | 6 | 318 | 1 | 325 | 5.88e-79 | 244 |
MS.gene02036.t1 | MTR_5g083860 | 43.478 | 322 | 173 | 4 | 4 | 318 | 6 | 325 | 6.21e-79 | 244 |
MS.gene02036.t1 | MTR_4g074995 | 41.994 | 331 | 153 | 6 | 3 | 318 | 2 | 308 | 1.54e-78 | 243 |
MS.gene02036.t1 | MTR_2g084000 | 44.156 | 308 | 165 | 3 | 17 | 318 | 13 | 319 | 2.82e-78 | 243 |
MS.gene02036.t1 | MTR_2g084010 | 42.994 | 314 | 159 | 3 | 17 | 318 | 13 | 318 | 4.51e-78 | 242 |
MS.gene02036.t1 | MTR_4g029190 | 40.974 | 349 | 166 | 6 | 1 | 318 | 1 | 340 | 4.99e-78 | 243 |
MS.gene02036.t1 | MTR_3g094670 | 45.122 | 328 | 153 | 6 | 1 | 314 | 4 | 318 | 5.33e-77 | 239 |
MS.gene02036.t1 | MTR_2g088770 | 41.325 | 317 | 168 | 6 | 15 | 317 | 12 | 324 | 1.85e-76 | 238 |
MS.gene02036.t1 | MTR_7g072480 | 43.533 | 317 | 157 | 4 | 14 | 318 | 10 | 316 | 2.06e-76 | 238 |
MS.gene02036.t1 | MTR_3g467600 | 42.320 | 319 | 162 | 4 | 14 | 317 | 12 | 323 | 4.76e-76 | 237 |
MS.gene02036.t1 | MTR_1g115900 | 40.752 | 319 | 166 | 5 | 13 | 317 | 11 | 320 | 1.34e-75 | 236 |
MS.gene02036.t1 | MTR_4g031140 | 40.064 | 312 | 170 | 4 | 25 | 324 | 24 | 330 | 1.59e-75 | 236 |
MS.gene02036.t1 | MTR_4g030890 | 41.748 | 309 | 163 | 4 | 24 | 320 | 95 | 398 | 1.66e-75 | 238 |
MS.gene02036.t1 | MTR_4g046713 | 40.312 | 320 | 171 | 5 | 11 | 317 | 13 | 325 | 1.05e-74 | 233 |
MS.gene02036.t1 | MTR_4g114210 | 42.320 | 319 | 157 | 8 | 15 | 315 | 8 | 317 | 1.36e-74 | 233 |
MS.gene02036.t1 | MTR_3g094630 | 45.171 | 321 | 163 | 5 | 1 | 314 | 4 | 318 | 6.82e-74 | 231 |
MS.gene02036.t1 | MTR_4g074990 | 40.785 | 331 | 154 | 6 | 3 | 318 | 2 | 305 | 2.45e-72 | 227 |
MS.gene02036.t1 | MTR_2g008710 | 42.000 | 300 | 151 | 6 | 32 | 315 | 30 | 322 | 3.97e-72 | 227 |
MS.gene02036.t1 | MTR_4g122640 | 41.000 | 300 | 166 | 3 | 29 | 318 | 38 | 336 | 3.47e-71 | 225 |
MS.gene02036.t1 | MTR_3g092990 | 40.379 | 317 | 174 | 3 | 14 | 317 | 11 | 325 | 6.60e-71 | 224 |
MS.gene02036.t1 | MTR_7g107520 | 40.317 | 315 | 170 | 5 | 15 | 317 | 11 | 319 | 9.71e-71 | 223 |
MS.gene02036.t1 | MTR_5g049280 | 39.385 | 325 | 176 | 7 | 14 | 318 | 14 | 337 | 2.28e-70 | 223 |
MS.gene02036.t1 | MTR_5g014100 | 40.705 | 312 | 167 | 3 | 23 | 317 | 20 | 330 | 2.25e-69 | 220 |
MS.gene02036.t1 | MTR_3g466180 | 40.895 | 313 | 163 | 4 | 14 | 314 | 17 | 319 | 2.39e-69 | 219 |
MS.gene02036.t1 | MTR_7g086820 | 40.323 | 310 | 167 | 7 | 21 | 320 | 13 | 314 | 4.48e-69 | 219 |
MS.gene02036.t1 | MTR_4g133800 | 40.134 | 299 | 156 | 6 | 34 | 319 | 46 | 334 | 9.87e-69 | 218 |
MS.gene02036.t1 | MTR_2g029880 | 54.167 | 216 | 73 | 4 | 139 | 342 | 7 | 208 | 1.19e-68 | 214 |
MS.gene02036.t1 | MTR_3g072190 | 47.368 | 247 | 123 | 2 | 73 | 314 | 3 | 247 | 1.56e-68 | 215 |
MS.gene02036.t1 | MTR_2g437770 | 41.806 | 299 | 150 | 8 | 32 | 317 | 53 | 340 | 2.29e-68 | 218 |
MS.gene02036.t1 | MTR_5g074860 | 39.875 | 321 | 150 | 5 | 6 | 318 | 1 | 286 | 3.36e-68 | 216 |
MS.gene02036.t1 | MTR_5g022870 | 39.809 | 314 | 165 | 9 | 14 | 314 | 10 | 312 | 4.30e-68 | 216 |
MS.gene02036.t1 | MTR_1g101830 | 38.608 | 316 | 175 | 6 | 14 | 317 | 13 | 321 | 1.61e-67 | 215 |
MS.gene02036.t1 | MTR_4g074980 | 39.329 | 328 | 152 | 7 | 3 | 318 | 2 | 294 | 2.25e-67 | 214 |
MS.gene02036.t1 | MTR_7g026990 | 39.262 | 298 | 159 | 4 | 33 | 318 | 35 | 322 | 2.22e-65 | 209 |
MS.gene02036.t1 | MTR_7g029030 | 39.939 | 328 | 173 | 8 | 1 | 315 | 1 | 317 | 2.37e-65 | 209 |
MS.gene02036.t1 | MTR_1g086320 | 38.922 | 334 | 182 | 6 | 1 | 317 | 4 | 332 | 1.74e-64 | 207 |
MS.gene02036.t1 | MTR_1g009750 | 40.196 | 306 | 163 | 7 | 28 | 317 | 26 | 327 | 2.40e-64 | 207 |
MS.gene02036.t1 | MTR_5g016010 | 38.138 | 333 | 185 | 7 | 1 | 317 | 1 | 328 | 3.61e-64 | 206 |
MS.gene02036.t1 | MTR_4g095450 | 41.379 | 319 | 166 | 8 | 7 | 314 | 12 | 320 | 4.00e-64 | 206 |
MS.gene02036.t1 | MTR_8g075100 | 38.312 | 308 | 168 | 8 | 23 | 317 | 20 | 318 | 4.33e-64 | 206 |
MS.gene02036.t1 | MTR_1g038680 | 39.934 | 303 | 160 | 7 | 33 | 317 | 33 | 331 | 6.25e-63 | 203 |
MS.gene02036.t1 | MTR_1g086490 | 38.123 | 341 | 182 | 6 | 1 | 317 | 4 | 339 | 7.10e-63 | 204 |
MS.gene02036.t1 | MTR_6g043280 | 40.064 | 312 | 167 | 9 | 24 | 320 | 28 | 334 | 1.00e-62 | 203 |
MS.gene02036.t1 | MTR_1g025980 | 37.846 | 325 | 180 | 8 | 7 | 317 | 1 | 317 | 1.61e-62 | 202 |
MS.gene02036.t1 | MTR_2g008160 | 37.942 | 311 | 165 | 8 | 24 | 315 | 19 | 320 | 6.05e-62 | 201 |
MS.gene02036.t1 | MTR_4g074980 | 41.762 | 261 | 128 | 6 | 3 | 248 | 2 | 253 | 5.47e-61 | 196 |
MS.gene02036.t1 | MTR_6g027440 | 38.339 | 313 | 172 | 7 | 14 | 314 | 7 | 310 | 3.37e-60 | 196 |
MS.gene02036.t1 | MTR_1g077000 | 36.420 | 324 | 189 | 8 | 1 | 314 | 7 | 323 | 9.52e-60 | 195 |
MS.gene02036.t1 | MTR_0155s0040 | 35.962 | 317 | 180 | 7 | 6 | 314 | 10 | 311 | 1.85e-59 | 194 |
MS.gene02036.t1 | MTR_3g092990 | 38.365 | 318 | 170 | 4 | 14 | 318 | 11 | 315 | 2.51e-59 | 194 |
MS.gene02036.t1 | MTR_4g127670 | 40.594 | 303 | 158 | 7 | 28 | 314 | 23 | 319 | 3.29e-59 | 194 |
MS.gene02036.t1 | MTR_6g043240 | 40.063 | 317 | 172 | 9 | 29 | 339 | 42 | 346 | 1.65e-58 | 192 |
MS.gene02036.t1 | MTR_6g043460 | 41.156 | 294 | 160 | 7 | 29 | 314 | 36 | 324 | 6.40e-58 | 191 |
MS.gene02036.t1 | MTR_7g086870 | 37.288 | 295 | 171 | 6 | 27 | 314 | 20 | 307 | 1.02e-56 | 187 |
MS.gene02036.t1 | MTR_4g132490 | 37.421 | 318 | 175 | 8 | 16 | 315 | 13 | 324 | 3.51e-56 | 186 |
MS.gene02036.t1 | MTR_4g087965 | 37.705 | 305 | 171 | 6 | 28 | 315 | 41 | 343 | 9.19e-56 | 185 |
MS.gene02036.t1 | MTR_2g008160 | 36.455 | 299 | 151 | 7 | 24 | 315 | 19 | 285 | 3.64e-55 | 182 |
MS.gene02036.t1 | MTR_3g105790 | 34.591 | 318 | 183 | 6 | 14 | 314 | 9 | 318 | 2.43e-53 | 178 |
MS.gene02036.t1 | MTR_1g090760 | 34.627 | 335 | 199 | 7 | 1 | 319 | 1 | 331 | 4.22e-53 | 178 |
MS.gene02036.t1 | MTR_2g099175 | 33.036 | 336 | 185 | 8 | 14 | 319 | 11 | 336 | 4.68e-53 | 178 |
MS.gene02036.t1 | MTR_1g009750 | 36.275 | 306 | 158 | 8 | 28 | 317 | 26 | 310 | 1.36e-52 | 176 |
MS.gene02036.t1 | MTR_2g067440 | 32.782 | 363 | 191 | 9 | 3 | 317 | 29 | 386 | 1.52e-52 | 178 |
MS.gene02036.t1 | MTR_8g062780 | 34.259 | 324 | 196 | 5 | 6 | 315 | 1 | 321 | 4.83e-52 | 175 |
MS.gene02036.t1 | MTR_2g008730 | 36.250 | 320 | 154 | 8 | 14 | 315 | 11 | 298 | 5.22e-52 | 174 |
MS.gene02036.t1 | MTR_2g077990 | 33.531 | 337 | 177 | 7 | 23 | 315 | 70 | 403 | 9.36e-50 | 171 |
MS.gene02036.t1 | MTR_5g033470 | 35.621 | 306 | 176 | 7 | 27 | 314 | 71 | 373 | 6.23e-49 | 168 |
MS.gene02036.t1 | MTR_2g078610 | 32.938 | 337 | 179 | 7 | 23 | 315 | 70 | 403 | 8.91e-49 | 169 |
MS.gene02036.t1 | MTR_2g067450 | 34.628 | 309 | 184 | 6 | 23 | 317 | 5 | 309 | 1.52e-47 | 163 |
MS.gene02036.t1 | MTR_1g066710 | 35.548 | 301 | 181 | 6 | 27 | 317 | 25 | 322 | 3.09e-47 | 162 |
MS.gene02036.t1 | MTR_2g078280 | 33.742 | 326 | 169 | 7 | 23 | 304 | 70 | 392 | 4.00e-46 | 161 |
MS.gene02036.t1 | MTR_0147s0010 | 31.790 | 324 | 173 | 6 | 26 | 317 | 74 | 381 | 2.20e-45 | 159 |
MS.gene02036.t1 | MTR_1g066380 | 34.884 | 301 | 183 | 6 | 27 | 317 | 25 | 322 | 3.48e-45 | 157 |
MS.gene02036.t1 | MTR_1g066680 | 34.884 | 301 | 182 | 7 | 27 | 317 | 25 | 321 | 5.02e-44 | 154 |
MS.gene02036.t1 | MTR_1g066640 | 34.884 | 301 | 183 | 6 | 27 | 317 | 25 | 322 | 1.05e-43 | 153 |
MS.gene02036.t1 | MTR_0286s0010 | 32.899 | 307 | 185 | 7 | 25 | 315 | 30 | 331 | 1.36e-43 | 153 |
MS.gene02036.t1 | MTR_6g008075 | 32.899 | 307 | 185 | 7 | 25 | 315 | 30 | 331 | 1.36e-43 | 153 |
MS.gene02036.t1 | MTR_4g132110 | 33.660 | 306 | 180 | 5 | 33 | 323 | 36 | 333 | 2.24e-43 | 152 |
MS.gene02036.t1 | MTR_5g074700 | 42.174 | 230 | 110 | 6 | 98 | 319 | 1 | 215 | 3.04e-43 | 149 |
MS.gene02036.t1 | MTR_2g008160 | 41.489 | 188 | 104 | 4 | 24 | 209 | 19 | 202 | 3.15e-43 | 148 |
MS.gene02036.t1 | MTR_4g132110 | 33.762 | 311 | 178 | 7 | 33 | 323 | 36 | 338 | 2.83e-42 | 150 |
MS.gene02036.t1 | MTR_3g072210 | 45.556 | 180 | 91 | 3 | 141 | 314 | 56 | 234 | 8.73e-40 | 140 |
MS.gene02036.t1 | MTR_7g072490 | 38.397 | 237 | 95 | 4 | 75 | 311 | 2 | 187 | 3.72e-38 | 135 |
MS.gene02036.t1 | MTR_1g066380 | 36.078 | 255 | 150 | 6 | 73 | 317 | 3 | 254 | 3.44e-36 | 132 |
MS.gene02036.t1 | MTR_3g105790 | 34.322 | 236 | 139 | 3 | 93 | 314 | 9 | 242 | 5.33e-36 | 131 |
MS.gene02036.t1 | MTR_3g072260 | 55.752 | 113 | 50 | 0 | 28 | 140 | 25 | 137 | 2.87e-34 | 123 |
MS.gene02036.t1 | MTR_2g029930 | 52.632 | 114 | 26 | 3 | 14 | 113 | 4 | 103 | 3.04e-28 | 106 |
MS.gene02036.t1 | MTR_7g086790 | 35.165 | 182 | 104 | 5 | 76 | 255 | 17 | 186 | 7.75e-21 | 89.4 |
MS.gene02036.t1 | MTR_1g089005 | 35.878 | 131 | 77 | 2 | 15 | 139 | 1 | 130 | 9.54e-20 | 85.1 |
MS.gene02036.t1 | MTR_2g078560 | 26.549 | 226 | 121 | 5 | 135 | 317 | 96 | 319 | 3.61e-19 | 87.0 |
MS.gene02036.t1 | MTR_5g058120 | 37.662 | 154 | 89 | 4 | 164 | 314 | 6 | 155 | 1.02e-18 | 84.7 |
MS.gene02036.t1 | MTR_4g114220 | 48.276 | 87 | 34 | 3 | 47 | 133 | 22 | 97 | 1.33e-17 | 79.0 |
MS.gene02036.t1 | MTR_1g098320 | 48.193 | 83 | 41 | 1 | 239 | 321 | 47 | 127 | 6.00e-17 | 77.0 |
MS.gene02036.t1 | MTR_6g048160 | 52.113 | 71 | 30 | 2 | 68 | 138 | 22 | 88 | 3.83e-16 | 73.2 |
MS.gene02036.t1 | MTR_4g012865 | 48.000 | 75 | 39 | 0 | 26 | 100 | 74 | 148 | 7.88e-14 | 68.6 |
MS.gene02036.t1 | MTR_5g074770 | 36.667 | 90 | 57 | 0 | 229 | 318 | 20 | 109 | 8.99e-14 | 67.4 |
MS.gene02036.t1 | MTR_3g462850 | 35.714 | 126 | 76 | 5 | 197 | 318 | 25 | 149 | 1.13e-13 | 68.2 |
MS.gene02036.t1 | MTR_4g031040 | 31.288 | 163 | 80 | 4 | 88 | 250 | 1 | 131 | 6.24e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02036.t1 | AT2G38380 | 53.722 | 309 | 130 | 2 | 25 | 320 | 27 | 335 | 1.37e-111 | 328 |
MS.gene02036.t1 | AT4G08770 | 53.165 | 316 | 134 | 3 | 25 | 326 | 20 | 335 | 4.73e-111 | 327 |
MS.gene02036.t1 | AT3G32980 | 51.652 | 333 | 140 | 4 | 25 | 343 | 27 | 352 | 4.21e-109 | 322 |
MS.gene02036.t1 | AT3G49120 | 50.432 | 347 | 148 | 5 | 14 | 343 | 14 | 353 | 4.54e-109 | 322 |
MS.gene02036.t1 | AT5G06730 | 50.309 | 324 | 149 | 1 | 14 | 325 | 18 | 341 | 1.77e-108 | 321 |
MS.gene02036.t1 | AT5G06720 | 52.351 | 319 | 139 | 3 | 14 | 320 | 18 | 335 | 1.80e-108 | 320 |
MS.gene02036.t1 | AT2G38390 | 52.427 | 309 | 134 | 2 | 25 | 320 | 27 | 335 | 4.92e-108 | 320 |
MS.gene02036.t1 | AT3G49110 | 49.568 | 347 | 151 | 5 | 14 | 343 | 15 | 354 | 1.61e-107 | 318 |
MS.gene02036.t1 | AT4G08780 | 51.266 | 316 | 140 | 3 | 25 | 326 | 20 | 335 | 2.62e-106 | 315 |
MS.gene02036.t1 | AT5G66390 | 46.462 | 325 | 155 | 4 | 6 | 317 | 14 | 332 | 2.35e-92 | 279 |
MS.gene02036.t1 | AT5G19880 | 45.141 | 319 | 157 | 4 | 15 | 318 | 14 | 329 | 6.76e-91 | 275 |
MS.gene02036.t1 | AT4G36430 | 46.535 | 303 | 149 | 2 | 24 | 314 | 25 | 326 | 9.34e-91 | 275 |
MS.gene02036.t1 | AT2G18140 | 47.000 | 300 | 146 | 2 | 31 | 318 | 37 | 335 | 1.12e-88 | 270 |
MS.gene02036.t1 | AT5G19890 | 48.287 | 321 | 144 | 6 | 14 | 318 | 13 | 327 | 1.35e-88 | 269 |
MS.gene02036.t1 | AT2G18150 | 46.667 | 300 | 147 | 2 | 27 | 314 | 34 | 332 | 1.75e-88 | 269 |
MS.gene02036.t1 | AT1G14550 | 45.988 | 324 | 153 | 5 | 10 | 318 | 5 | 321 | 1.02e-86 | 264 |
MS.gene02036.t1 | AT5G05340 | 48.136 | 295 | 144 | 4 | 27 | 314 | 28 | 320 | 9.02e-84 | 257 |
MS.gene02036.t1 | AT3G50990 | 44.805 | 308 | 157 | 2 | 24 | 319 | 36 | 342 | 1.07e-83 | 257 |
MS.gene02036.t1 | AT1G44970 | 46.026 | 302 | 151 | 1 | 29 | 318 | 45 | 346 | 3.09e-82 | 253 |
MS.gene02036.t1 | AT1G14540 | 44.237 | 321 | 150 | 4 | 10 | 318 | 12 | 315 | 2.51e-80 | 248 |
MS.gene02036.t1 | AT1G49570 | 43.689 | 309 | 155 | 5 | 23 | 316 | 44 | 348 | 3.86e-80 | 248 |
MS.gene02036.t1 | AT5G58390 | 45.253 | 316 | 149 | 6 | 14 | 314 | 6 | 312 | 7.15e-78 | 241 |
MS.gene02036.t1 | AT4G16270 | 44.702 | 302 | 152 | 5 | 29 | 318 | 50 | 348 | 2.68e-77 | 241 |
MS.gene02036.t1 | AT5G64120 | 42.470 | 332 | 159 | 9 | 10 | 318 | 6 | 328 | 5.16e-77 | 239 |
MS.gene02036.t1 | AT1G71695 | 43.854 | 301 | 147 | 6 | 29 | 315 | 44 | 336 | 1.66e-74 | 234 |
MS.gene02036.t1 | AT3G03670 | 40.312 | 320 | 174 | 5 | 7 | 314 | 3 | 317 | 1.67e-74 | 233 |
MS.gene02036.t1 | AT4G25980 | 40.867 | 323 | 164 | 7 | 10 | 315 | 11 | 323 | 1.11e-73 | 231 |
MS.gene02036.t1 | AT3G21770 | 41.503 | 306 | 161 | 6 | 24 | 315 | 24 | 325 | 1.52e-72 | 228 |
MS.gene02036.t1 | AT1G68850 | 41.060 | 302 | 160 | 7 | 33 | 317 | 34 | 334 | 2.45e-72 | 228 |
MS.gene02036.t1 | AT2G41480 | 40.798 | 326 | 166 | 7 | 12 | 317 | 9 | 327 | 2.56e-72 | 228 |
MS.gene02036.t1 | AT2G22420 | 41.118 | 304 | 162 | 4 | 29 | 320 | 23 | 321 | 3.46e-72 | 227 |
MS.gene02036.t1 | AT5G17820 | 39.936 | 313 | 163 | 7 | 14 | 314 | 10 | 309 | 4.57e-72 | 226 |
MS.gene02036.t1 | AT5G51890 | 40.125 | 319 | 170 | 7 | 14 | 317 | 9 | 321 | 1.18e-71 | 226 |
MS.gene02036.t1 | AT5G58400 | 42.587 | 317 | 157 | 7 | 14 | 314 | 14 | 321 | 8.00e-71 | 224 |
MS.gene02036.t1 | AT5G17820 | 39.936 | 313 | 163 | 7 | 14 | 314 | 63 | 362 | 1.01e-70 | 224 |
MS.gene02036.t1 | AT5G39580 | 40.483 | 331 | 169 | 7 | 1 | 318 | 4 | 319 | 1.02e-70 | 223 |
MS.gene02036.t1 | AT1G05260 | 39.692 | 325 | 175 | 8 | 6 | 315 | 4 | 322 | 1.50e-69 | 220 |
MS.gene02036.t1 | AT4G11290 | 39.385 | 325 | 176 | 8 | 10 | 318 | 7 | 326 | 2.99e-69 | 219 |
MS.gene02036.t1 | AT3G01190 | 39.264 | 326 | 172 | 10 | 3 | 314 | 4 | 317 | 2.40e-68 | 217 |
MS.gene02036.t1 | AT2G35380 | 43.377 | 302 | 155 | 4 | 32 | 317 | 33 | 334 | 3.16e-68 | 217 |
MS.gene02036.t1 | AT5G15180 | 38.961 | 308 | 169 | 7 | 25 | 318 | 27 | 329 | 1.28e-67 | 216 |
MS.gene02036.t1 | AT4G30170 | 40.968 | 310 | 158 | 6 | 26 | 318 | 24 | 325 | 1.61e-67 | 215 |
MS.gene02036.t1 | AT1G05240 | 38.511 | 309 | 158 | 7 | 29 | 316 | 26 | 323 | 3.36e-67 | 214 |
MS.gene02036.t1 | AT1G05250 | 38.511 | 309 | 158 | 7 | 29 | 316 | 26 | 323 | 3.36e-67 | 214 |
MS.gene02036.t1 | AT4G37530 | 40.850 | 306 | 162 | 6 | 25 | 314 | 23 | 325 | 7.59e-66 | 211 |
MS.gene02036.t1 | AT2G18980 | 41.558 | 308 | 155 | 6 | 27 | 317 | 23 | 322 | 9.01e-66 | 211 |
MS.gene02036.t1 | AT5G67400 | 39.091 | 330 | 180 | 7 | 1 | 314 | 1 | 325 | 4.20e-65 | 209 |
MS.gene02036.t1 | AT5G64110 | 41.722 | 302 | 153 | 6 | 32 | 318 | 37 | 330 | 1.60e-64 | 207 |
MS.gene02036.t1 | AT3G49960 | 39.564 | 321 | 172 | 7 | 10 | 314 | 11 | 325 | 1.14e-63 | 205 |
MS.gene02036.t1 | AT5G64100 | 39.535 | 301 | 157 | 7 | 32 | 317 | 40 | 330 | 4.37e-63 | 204 |
MS.gene02036.t1 | AT5G14130 | 39.145 | 304 | 168 | 5 | 25 | 315 | 28 | 327 | 9.93e-63 | 203 |
MS.gene02036.t1 | AT5G14130 | 39.474 | 304 | 167 | 5 | 25 | 315 | 69 | 368 | 1.98e-62 | 203 |
MS.gene02036.t1 | AT5G42180 | 37.273 | 330 | 180 | 8 | 1 | 317 | 1 | 316 | 2.66e-62 | 201 |
MS.gene02036.t1 | AT1G77100 | 36.760 | 321 | 187 | 6 | 6 | 315 | 1 | 316 | 1.99e-59 | 194 |
MS.gene02036.t1 | AT4G33420 | 39.384 | 292 | 164 | 7 | 29 | 314 | 37 | 321 | 8.40e-59 | 192 |
MS.gene02036.t1 | AT4G33420 | 39.384 | 292 | 164 | 7 | 29 | 314 | 84 | 368 | 2.42e-58 | 193 |
MS.gene02036.t1 | AT4G37520 | 38.961 | 308 | 161 | 7 | 27 | 314 | 25 | 325 | 3.81e-58 | 191 |
MS.gene02036.t1 | AT4G26010 | 37.097 | 310 | 183 | 5 | 10 | 314 | 3 | 305 | 5.15e-58 | 190 |
MS.gene02036.t1 | AT4G26010 | 37.097 | 310 | 183 | 5 | 10 | 314 | 31 | 333 | 7.79e-58 | 191 |
MS.gene02036.t1 | AT1G30870 | 37.584 | 298 | 161 | 8 | 33 | 315 | 55 | 342 | 1.21e-57 | 190 |
MS.gene02036.t1 | AT5G40150 | 37.821 | 312 | 177 | 6 | 18 | 317 | 21 | 327 | 2.06e-57 | 189 |
MS.gene02036.t1 | AT2G39040 | 39.677 | 310 | 164 | 9 | 27 | 317 | 44 | 349 | 8.43e-57 | 188 |
MS.gene02036.t1 | AT4G37520 | 38.636 | 308 | 159 | 8 | 27 | 314 | 25 | 322 | 8.90e-57 | 187 |
MS.gene02036.t1 | AT4G31760 | 33.535 | 331 | 199 | 5 | 2 | 318 | 3 | 326 | 1.33e-55 | 184 |
MS.gene02036.t1 | AT3G28200 | 36.721 | 305 | 179 | 6 | 24 | 318 | 16 | 316 | 3.33e-55 | 183 |
MS.gene02036.t1 | AT4G37530 | 41.603 | 262 | 128 | 6 | 25 | 266 | 23 | 279 | 1.71e-54 | 180 |
MS.gene02036.t1 | AT4G17690 | 38.487 | 304 | 168 | 7 | 29 | 319 | 26 | 323 | 1.82e-54 | 181 |
MS.gene02036.t1 | AT2G43480 | 36.545 | 301 | 160 | 7 | 37 | 317 | 45 | 334 | 5.79e-54 | 180 |
MS.gene02036.t1 | AT5G22410 | 36.275 | 306 | 167 | 11 | 27 | 314 | 26 | 321 | 7.74e-53 | 177 |
MS.gene02036.t1 | AT4G33870 | 31.627 | 332 | 173 | 7 | 33 | 315 | 72 | 398 | 1.86e-52 | 178 |
MS.gene02036.t1 | AT2G24800 | 35.179 | 307 | 178 | 5 | 27 | 318 | 29 | 329 | 5.06e-52 | 175 |
MS.gene02036.t1 | AT2G34060 | 36.688 | 308 | 174 | 8 | 26 | 315 | 39 | 343 | 7.98e-52 | 175 |
MS.gene02036.t1 | AT5G24070 | 34.146 | 328 | 189 | 7 | 6 | 314 | 12 | 331 | 9.63e-52 | 175 |
MS.gene02036.t1 | AT1G34510 | 36.304 | 303 | 181 | 5 | 17 | 314 | 10 | 305 | 7.92e-51 | 171 |
MS.gene02036.t1 | AT2G35380 | 43.089 | 246 | 124 | 4 | 88 | 317 | 1 | 246 | 2.99e-48 | 163 |
MS.gene02036.t1 | AT5G47000 | 34.365 | 323 | 183 | 8 | 11 | 315 | 16 | 327 | 2.46e-47 | 163 |
MS.gene02036.t1 | AT3G17070 | 34.756 | 328 | 192 | 9 | 6 | 317 | 17 | 338 | 3.67e-46 | 160 |
MS.gene02036.t1 | AT1G24110 | 33.634 | 333 | 189 | 8 | 1 | 315 | 1 | 319 | 1.58e-45 | 158 |
MS.gene02036.t1 | AT4G21960 | 34.106 | 302 | 176 | 5 | 33 | 319 | 35 | 328 | 3.90e-44 | 154 |
MS.gene02036.t1 | AT4G25980 | 45.109 | 184 | 93 | 4 | 10 | 193 | 56 | 231 | 6.00e-44 | 153 |
MS.gene02036.t1 | AT2G37130 | 34.211 | 304 | 186 | 7 | 25 | 317 | 26 | 326 | 2.14e-43 | 152 |
MS.gene02036.t1 | AT2G37130 | 34.459 | 296 | 180 | 7 | 33 | 317 | 3 | 295 | 5.44e-42 | 148 |
MS.gene02036.t1 | AT5G39580 | 41.500 | 200 | 102 | 5 | 1 | 197 | 4 | 191 | 1.85e-37 | 134 |
MS.gene02036.t1 | AT3G17070 | 33.588 | 262 | 155 | 8 | 71 | 317 | 18 | 275 | 7.75e-30 | 115 |
MS.gene02036.t1 | AT2G24800 | 38.922 | 167 | 98 | 1 | 27 | 193 | 29 | 191 | 1.04e-29 | 114 |
Find 75 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTGTGGAGTTGATATT+TGG | 0.104890 | 2.2:-58841222 | None:intergenic |
AAAGAAAGCACTTTGGTTAT+TGG | 0.160435 | 2.2:-58842013 | None:intergenic |
CAACAATCTTAAGGTTAAAA+AGG | 0.165114 | 2.2:+58841918 | MS.gene02036:CDS |
TAAGTTAGCAATGATTAAAA+TGG | 0.187473 | 2.2:+58842044 | MS.gene02036:CDS |
TCTTATTTCTCCTTTCTTTC+CGG | 0.196788 | 2.2:-58842085 | None:intergenic |
GTTGATCTAGTAGCACTTTC+AGG | 0.229688 | 2.2:+58841631 | MS.gene02036:CDS |
TCAGCACAAGAAACTGTATT+AGG | 0.241051 | 2.2:-58841291 | None:intergenic |
GAATGCCTGCGATTCTAATT+AGG | 0.253187 | 2.2:+58841012 | MS.gene02036:CDS |
ATATGGTTAGTTCAATTTAA+AGG | 0.264013 | 2.2:+58842187 | MS.gene02036:CDS |
CAAAATCAATGTCCTCAAAA+TGG | 0.300543 | 2.2:+58841832 | MS.gene02036:CDS |
GGTAATATTGGTGTGCTTAC+CGG | 0.310448 | 2.2:+58842066 | MS.gene02036:CDS |
CGGACAATGGAATTAAGATT+TGG | 0.317064 | 2.2:-58840954 | None:intergenic |
ACAATCATTTGAAGAGGATA+TGG | 0.318003 | 2.2:+58842170 | MS.gene02036:CDS |
TGCTGTATTGTGGTTGTGTT+TGG | 0.328682 | 2.2:+58840873 | MS.gene02036:CDS |
GGCAGTGTTGTTCAGCAAAA+TGG | 0.337092 | 2.2:-58841172 | None:intergenic |
ATGATTAAAATGGGTAATAT+TGG | 0.337677 | 2.2:+58842054 | MS.gene02036:CDS |
AATTAGAATCGCAGGCATTC+GGG | 0.341966 | 2.2:-58841009 | None:intergenic |
CTCTTGTGGAGTTGATATTT+GGG | 0.366211 | 2.2:-58841221 | None:intergenic |
TAATTAGAATCGCAGGCATT+CGG | 0.369554 | 2.2:-58841010 | None:intergenic |
TGAGTTGGATCTTGCTACTT+TGG | 0.383736 | 2.2:+58842140 | MS.gene02036:CDS |
AGCTGTGCATTTGAAGATAA+AGG | 0.385712 | 2.2:-58840903 | None:intergenic |
AAATTGACACGGTTATTTCC+AGG | 0.386875 | 2.2:-58841856 | None:intergenic |
GAACTTCTACAACAATCTTA+AGG | 0.390275 | 2.2:+58841909 | MS.gene02036:CDS |
TTGGTGTTGAGAACAATTCT+TGG | 0.399811 | 2.2:-58841957 | None:intergenic |
GTTGACTTAGATTGAAGAAA+GGG | 0.406948 | 2.2:-58841573 | None:intergenic |
CAGCACAAGAAACTGTATTA+GGG | 0.409122 | 2.2:-58841290 | None:intergenic |
TCCAATGTATCAGGAGTAGT+TGG | 0.413628 | 2.2:-58841883 | None:intergenic |
CCATTGTCCGCGAAATCGTT+AGG | 0.414826 | 2.2:+58840967 | MS.gene02036:CDS |
AAGTTCTTGTCCAATGTATC+AGG | 0.418842 | 2.2:-58841892 | None:intergenic |
GACTATCCCTTCTTCCCAAT+GGG | 0.434405 | 2.2:-58841510 | None:intergenic |
TCCCAATGGGACGATCCAAC+CGG | 0.436069 | 2.2:-58841497 | None:intergenic |
CCCAACTACTCCTGATACAT+TGG | 0.443362 | 2.2:+58841882 | MS.gene02036:CDS |
TATCAACTCCACAAGAGGTT+TGG | 0.450632 | 2.2:+58841227 | MS.gene02036:CDS |
CCCGGTTGGATCGTCCCATT+GGG | 0.451622 | 2.2:+58841496 | MS.gene02036:CDS |
AAGTTAGCAATGATTAAAAT+GGG | 0.464811 | 2.2:+58842045 | MS.gene02036:CDS |
GGATCGTCCCATTGGGAAGA+AGG | 0.482573 | 2.2:+58841503 | MS.gene02036:CDS |
AACTTCTTTGTGCTGTATTG+TGG | 0.485148 | 2.2:+58840863 | MS.gene02036:CDS |
TCCCGGTTGGATCGTCCCAT+TGG | 0.487324 | 2.2:+58841495 | MS.gene02036:CDS |
TTGTAGTTCGCTCACGATAG+TGG | 0.490556 | 2.2:-58841193 | None:intergenic |
AAATCTTCCTTTGCTGCTCA+AGG | 0.493742 | 2.2:+58841598 | MS.gene02036:CDS |
ATGCTAGTGGTATCTGCATT+TGG | 0.498934 | 2.2:-58841976 | None:intergenic |
GTTATATCAAGAGTTGGATC+AGG | 0.500805 | 2.2:-58841793 | None:intergenic |
AGTTGACTTAGATTGAAGAA+AGG | 0.501508 | 2.2:-58841574 | None:intergenic |
CTTAGATTGAAGAAAGGGGC+TGG | 0.506747 | 2.2:-58841568 | None:intergenic |
AGCTCTCAAAGAAAGCACTT+TGG | 0.512915 | 2.2:-58842020 | None:intergenic |
CACAACTACCAAACCTCTTG+TGG | 0.517067 | 2.2:-58841235 | None:intergenic |
CAATGTCCTCAAAATGGACC+TGG | 0.519796 | 2.2:+58841838 | MS.gene02036:CDS |
AAGTACGTTATATCAAGAGT+TGG | 0.528818 | 2.2:-58841799 | None:intergenic |
TTATACAACTTCAGCAATAC+CGG | 0.529077 | 2.2:+58841766 | MS.gene02036:CDS |
TAAAGTTCCTAACGATTTCG+CGG | 0.531863 | 2.2:-58840974 | None:intergenic |
AATCTATATTCACAGAGTAA+AGG | 0.533652 | 2.2:+58841472 | MS.gene02036:intron |
AGACTATCCCTTCTTCCCAA+TGG | 0.535271 | 2.2:-58841511 | None:intergenic |
GGTGTGCTTACCGGAAAGAA+AGG | 0.536908 | 2.2:+58842075 | MS.gene02036:CDS |
CCTAACGATTTCGCGGACAA+TGG | 0.537562 | 2.2:-58840967 | None:intergenic |
CCAAATATCAACTCCACAAG+AGG | 0.553942 | 2.2:+58841222 | MS.gene02036:CDS |
TGCTAGAATATCTTCCGTCC+TGG | 0.556370 | 2.2:+58841329 | MS.gene02036:CDS |
GTTGAGACCTTGAGCAGCAA+AGG | 0.560250 | 2.2:-58841605 | None:intergenic |
TGAAGCCTAATTAGAATCGC+AGG | 0.561475 | 2.2:-58841017 | None:intergenic |
CCCAATGGGACGATCCAACC+GGG | 0.571337 | 2.2:-58841496 | None:intergenic |
CCAATGTATCAGGAGTAGTT+GGG | 0.573997 | 2.2:-58841882 | None:intergenic |
CACAGAGTAAAGGTCCCGGT+TGG | 0.588840 | 2.2:+58841482 | MS.gene02036:intron |
ATCCTCTTCAAATGATTGTG+TGG | 0.601274 | 2.2:-58842166 | None:intergenic |
AAGAGTTGGATCAGGTTCAC+CGG | 0.605304 | 2.2:-58841785 | None:intergenic |
TATTCACAGAGTAAAGGTCC+CGG | 0.611425 | 2.2:+58841478 | MS.gene02036:intron |
CTCCACACAATCATTTGAAG+AGG | 0.618820 | 2.2:+58842164 | MS.gene02036:CDS |
AGAAGTTGCTATGAGACGAA+AGG | 0.623304 | 2.2:-58840847 | None:intergenic |
CTCTTCAAATGATTGTGTGG+AGG | 0.635008 | 2.2:-58842163 | None:intergenic |
GAAGTTATTAACAATGCTAG+TGG | 0.635363 | 2.2:-58841989 | None:intergenic |
TGCTGCTCAAGGTCTCAACA+CGG | 0.635681 | 2.2:+58841609 | MS.gene02036:CDS |
GATCGTCCCATTGGGAAGAA+GGG | 0.636305 | 2.2:+58841504 | MS.gene02036:CDS |
TTGACTTAGATTGAAGAAAG+GGG | 0.637018 | 2.2:-58841572 | None:intergenic |
ATTAGAATCGCAGGCATTCG+GGG | 0.641750 | 2.2:-58841008 | None:intergenic |
TAGTTGGGTCGAAATTGACA+CGG | 0.696351 | 2.2:-58841867 | None:intergenic |
ATATATCATATGTACCAGGA+CGG | 0.707978 | 2.2:-58841343 | None:intergenic |
GAATCGTATCAAGACAGACG+TGG | 0.712582 | 2.2:+58841257 | MS.gene02036:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATTATTAATTATTGAAAC+AGG | + | chr2.2:58841137-58841156 | MS.gene02036:intron | 15.0% |
!! | CATTATTAATTATTGAAACA+GGG | + | chr2.2:58841138-58841157 | MS.gene02036:intron | 15.0% |
!! | AACAATCTTAAGGTTAAAAA+GGG | + | chr2.2:58841919-58841938 | MS.gene02036:CDS | 20.0% |
!! | AAGTTAGCAATGATTAAAAT+GGG | + | chr2.2:58842045-58842064 | MS.gene02036:CDS | 20.0% |
!! | ATGATTAAAATGGGTAATAT+TGG | + | chr2.2:58842054-58842073 | MS.gene02036:CDS | 20.0% |
!! | TAAGTTAGCAATGATTAAAA+TGG | + | chr2.2:58842044-58842063 | MS.gene02036:CDS | 20.0% |
! | AATCTATATTCACAGAGTAA+AGG | + | chr2.2:58841472-58841491 | MS.gene02036:intron | 25.0% |
! | CAACAATCTTAAGGTTAAAA+AGG | + | chr2.2:58841918-58841937 | MS.gene02036:CDS | 25.0% |
! | TCCATCACGTATAATATTTA+AGG | - | chr2.2:58841731-58841750 | None:intergenic | 25.0% |
! | TCCTTAAATATTATACGTGA+TGG | + | chr2.2:58841727-58841746 | MS.gene02036:intron | 25.0% |
AAGTACGTTATATCAAGAGT+TGG | - | chr2.2:58841802-58841821 | None:intergenic | 30.0% | |
ACAATCATTTGAAGAGGATA+TGG | + | chr2.2:58842170-58842189 | MS.gene02036:CDS | 30.0% | |
AGACATATATCATATGTACC+AGG | - | chr2.2:58841350-58841369 | None:intergenic | 30.0% | |
ATATATCATATGTACCAGGA+CGG | - | chr2.2:58841346-58841365 | None:intergenic | 30.0% | |
CAAAATCAATGTCCTCAAAA+TGG | + | chr2.2:58841832-58841851 | MS.gene02036:CDS | 30.0% | |
GAACTTCTACAACAATCTTA+AGG | + | chr2.2:58841909-58841928 | MS.gene02036:CDS | 30.0% | |
GAAGTTATTAACAATGCTAG+TGG | - | chr2.2:58841992-58842011 | None:intergenic | 30.0% | |
TCACAAAAAATCTTCTGAGT+TGG | + | chr2.2:58842125-58842144 | MS.gene02036:CDS | 30.0% | |
TTATACAACTTCAGCAATAC+CGG | + | chr2.2:58841766-58841785 | MS.gene02036:CDS | 30.0% | |
TTGACTTAGATTGAAGAAAG+GGG | - | chr2.2:58841575-58841594 | None:intergenic | 30.0% | |
! | AGTTGACTTAGATTGAAGAA+AGG | - | chr2.2:58841577-58841596 | None:intergenic | 30.0% |
! | GTTGACTTAGATTGAAGAAA+GGG | - | chr2.2:58841576-58841595 | None:intergenic | 30.0% |
! | TCTTATTTCTCCTTTCTTTC+CGG | - | chr2.2:58842088-58842107 | None:intergenic | 30.0% |
!! | AAAGAAAGCACTTTGGTTAT+TGG | - | chr2.2:58842016-58842035 | None:intergenic | 30.0% |
!! | CAAGTTTTGCTATAAAAGGA+TGG | - | chr2.2:58840933-58840952 | None:intergenic | 30.0% |
!! | TGGACAAGTTTTGCTATAAA+AGG | - | chr2.2:58840937-58840956 | None:intergenic | 30.0% |
!!! | TGGAAGATTTTGATTTGCAA+GGG | - | chr2.2:58841551-58841570 | None:intergenic | 30.0% |
AACTTCTTTGTGCTGTATTG+TGG | + | chr2.2:58840863-58840882 | MS.gene02036:CDS | 35.0% | |
AAGTTCTTGTCCAATGTATC+AGG | - | chr2.2:58841895-58841914 | None:intergenic | 35.0% | |
AGCTGTGCATTTGAAGATAA+AGG | - | chr2.2:58840906-58840925 | None:intergenic | 35.0% | |
ATCCTCTTCAAATGATTGTG+TGG | - | chr2.2:58842169-58842188 | None:intergenic | 35.0% | |
CAGCACAAGAAACTGTATTA+GGG | - | chr2.2:58841293-58841312 | None:intergenic | 35.0% | |
CGGACAATGGAATTAAGATT+TGG | - | chr2.2:58840957-58840976 | None:intergenic | 35.0% | |
GATCACTTGCTTAGAAAATG+TGG | - | chr2.2:58841671-58841690 | None:intergenic | 35.0% | |
GTTATATCAAGAGTTGGATC+AGG | - | chr2.2:58841796-58841815 | None:intergenic | 35.0% | |
TAAAGTTCCTAACGATTTCG+CGG | - | chr2.2:58840977-58840996 | None:intergenic | 35.0% | |
TAATTAGAATCGCAGGCATT+CGG | - | chr2.2:58841013-58841032 | None:intergenic | 35.0% | |
TCAGCACAAGAAACTGTATT+AGG | - | chr2.2:58841294-58841313 | None:intergenic | 35.0% | |
! | AAATTGACACGGTTATTTCC+AGG | - | chr2.2:58841859-58841878 | None:intergenic | 35.0% |
! | TTATTTCCAGGTCCATTTTG+AGG | - | chr2.2:58841847-58841866 | None:intergenic | 35.0% |
!! | CTCTTGTGGAGTTGATATTT+GGG | - | chr2.2:58841224-58841243 | None:intergenic | 35.0% |
!! | TTGGTGTTGAGAACAATTCT+TGG | - | chr2.2:58841960-58841979 | None:intergenic | 35.0% |
!!! | CTGGAAGATTTTGATTTGCA+AGG | - | chr2.2:58841552-58841571 | None:intergenic | 35.0% |
AAATCTTCCTTTGCTGCTCA+AGG | + | chr2.2:58841598-58841617 | MS.gene02036:CDS | 40.0% | |
AATTAGAATCGCAGGCATTC+GGG | - | chr2.2:58841012-58841031 | None:intergenic | 40.0% | |
AGAAGTTGCTATGAGACGAA+AGG | - | chr2.2:58840850-58840869 | None:intergenic | 40.0% | |
ATGCTAGTGGTATCTGCATT+TGG | - | chr2.2:58841979-58841998 | None:intergenic | 40.0% | |
CCAAATATCAACTCCACAAG+AGG | + | chr2.2:58841222-58841241 | MS.gene02036:CDS | 40.0% | |
CCAATGTATCAGGAGTAGTT+GGG | - | chr2.2:58841885-58841904 | None:intergenic | 40.0% | |
CTCCACACAATCATTTGAAG+AGG | + | chr2.2:58842164-58842183 | MS.gene02036:CDS | 40.0% | |
CTCTTCAAATGATTGTGTGG+AGG | - | chr2.2:58842166-58842185 | None:intergenic | 40.0% | |
GAATGCCTGCGATTCTAATT+AGG | + | chr2.2:58841012-58841031 | MS.gene02036:CDS | 40.0% | |
GGTAATATTGGTGTGCTTAC+CGG | + | chr2.2:58842066-58842085 | MS.gene02036:CDS | 40.0% | |
GTTGATCTAGTAGCACTTTC+AGG | + | chr2.2:58841631-58841650 | MS.gene02036:CDS | 40.0% | |
TAGTTGGGTCGAAATTGACA+CGG | - | chr2.2:58841870-58841889 | None:intergenic | 40.0% | |
TATCAACTCCACAAGAGGTT+TGG | + | chr2.2:58841227-58841246 | MS.gene02036:CDS | 40.0% | |
TATTCACAGAGTAAAGGTCC+CGG | + | chr2.2:58841478-58841497 | MS.gene02036:intron | 40.0% | |
TCCAATGTATCAGGAGTAGT+TGG | - | chr2.2:58841886-58841905 | None:intergenic | 40.0% | |
TGAAGCCTAATTAGAATCGC+AGG | - | chr2.2:58841020-58841039 | None:intergenic | 40.0% | |
TGCTGTATTGTGGTTGTGTT+TGG | + | chr2.2:58840873-58840892 | MS.gene02036:CDS | 40.0% | |
! | TGAGTTGGATCTTGCTACTT+TGG | + | chr2.2:58842140-58842159 | MS.gene02036:CDS | 40.0% |
!! | AGCTCTCAAAGAAAGCACTT+TGG | - | chr2.2:58842023-58842042 | None:intergenic | 40.0% |
!! | CCTCTTGTGGAGTTGATATT+TGG | - | chr2.2:58841225-58841244 | None:intergenic | 40.0% |
AAGAGTTGGATCAGGTTCAC+CGG | - | chr2.2:58841788-58841807 | None:intergenic | 45.0% | |
AGACTATCCCTTCTTCCCAA+TGG | - | chr2.2:58841514-58841533 | None:intergenic | 45.0% | |
ATTAGAATCGCAGGCATTCG+GGG | - | chr2.2:58841011-58841030 | None:intergenic | 45.0% | |
CAATGTCCTCAAAATGGACC+TGG | + | chr2.2:58841838-58841857 | MS.gene02036:CDS | 45.0% | |
CACAACTACCAAACCTCTTG+TGG | - | chr2.2:58841238-58841257 | None:intergenic | 45.0% | |
CCCAACTACTCCTGATACAT+TGG | + | chr2.2:58841882-58841901 | MS.gene02036:CDS | 45.0% | |
CTTAGATTGAAGAAAGGGGC+TGG | - | chr2.2:58841571-58841590 | None:intergenic | 45.0% | |
GAATCGTATCAAGACAGACG+TGG | + | chr2.2:58841257-58841276 | MS.gene02036:CDS | 45.0% | |
GACTATCCCTTCTTCCCAAT+GGG | - | chr2.2:58841513-58841532 | None:intergenic | 45.0% | |
TGCTAGAATATCTTCCGTCC+TGG | + | chr2.2:58841329-58841348 | MS.gene02036:CDS | 45.0% | |
TTGTAGTTCGCTCACGATAG+TGG | - | chr2.2:58841196-58841215 | None:intergenic | 45.0% | |
! | GGCAGTGTTGTTCAGCAAAA+TGG | - | chr2.2:58841175-58841194 | None:intergenic | 45.0% |
!! | TAAAAAAAAAAAACATTATA+TGG | + | chr2.2:58841434-58841453 | MS.gene02036:intron | 5.0% |
!!! | ATAATGTTTTTTTTTTTTAA+GGG | - | chr2.2:58841433-58841452 | None:intergenic | 5.0% |
!!! | TATAATGTTTTTTTTTTTTA+AGG | - | chr2.2:58841434-58841453 | None:intergenic | 5.0% |
CCATTGTCCGCGAAATCGTT+AGG | + | chr2.2:58840967-58840986 | MS.gene02036:CDS | 50.0% | |
CCTAACGATTTCGCGGACAA+TGG | - | chr2.2:58840970-58840989 | None:intergenic | 50.0% | |
GATCGTCCCATTGGGAAGAA+GGG | + | chr2.2:58841504-58841523 | MS.gene02036:CDS | 50.0% | |
GGTGTGCTTACCGGAAAGAA+AGG | + | chr2.2:58842075-58842094 | MS.gene02036:CDS | 50.0% | |
GTTGAGACCTTGAGCAGCAA+AGG | - | chr2.2:58841608-58841627 | None:intergenic | 50.0% | |
TGCTGCTCAAGGTCTCAACA+CGG | + | chr2.2:58841609-58841628 | MS.gene02036:CDS | 50.0% | |
CACAGAGTAAAGGTCCCGGT+TGG | + | chr2.2:58841482-58841501 | MS.gene02036:intron | 55.0% | |
GGATCGTCCCATTGGGAAGA+AGG | + | chr2.2:58841503-58841522 | MS.gene02036:CDS | 55.0% | |
TCCCAATGGGACGATCCAAC+CGG | - | chr2.2:58841500-58841519 | None:intergenic | 55.0% | |
CCCAATGGGACGATCCAACC+GGG | - | chr2.2:58841499-58841518 | None:intergenic | 60.0% | |
CCCGGTTGGATCGTCCCATT+GGG | + | chr2.2:58841496-58841515 | MS.gene02036:CDS | 60.0% | |
TCCCGGTTGGATCGTCCCAT+TGG | + | chr2.2:58841495-58841514 | MS.gene02036:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 58840840 | 58842206 | 58840840 | ID=MS.gene02036 |
chr2.2 | mRNA | 58840840 | 58842206 | 58840840 | ID=MS.gene02036.t1;Parent=MS.gene02036 |
chr2.2 | exon | 58840840 | 58841061 | 58840840 | ID=MS.gene02036.t1.exon1;Parent=MS.gene02036.t1 |
chr2.2 | CDS | 58840840 | 58841061 | 58840840 | ID=cds.MS.gene02036.t1;Parent=MS.gene02036.t1 |
chr2.2 | exon | 58841159 | 58841350 | 58841159 | ID=MS.gene02036.t1.exon2;Parent=MS.gene02036.t1 |
chr2.2 | CDS | 58841159 | 58841350 | 58841159 | ID=cds.MS.gene02036.t1;Parent=MS.gene02036.t1 |
chr2.2 | exon | 58841487 | 58841652 | 58841487 | ID=MS.gene02036.t1.exon3;Parent=MS.gene02036.t1 |
chr2.2 | CDS | 58841487 | 58841652 | 58841487 | ID=cds.MS.gene02036.t1;Parent=MS.gene02036.t1 |
chr2.2 | exon | 58841755 | 58842206 | 58841755 | ID=MS.gene02036.t1.exon4;Parent=MS.gene02036.t1 |
chr2.2 | CDS | 58841755 | 58842206 | 58841755 | ID=cds.MS.gene02036.t1;Parent=MS.gene02036.t1 |
Gene Sequence |
Protein sequence |