AlfalfaGEDB | MS.gene003278

M. sativa cultivar XinJiangDaYe / MS.gene003278

KEGG: K00430
GO: GO:0003674 GO:0003824 GO:0004601 GO:0005488 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016209 GO:0016491 GO:0016684 GO:0016999 GO:0017001 GO:0017144 GO:0020037 GO:0042737 GO:0042743 GO:0042744 GO:0044237 GO:0044248 GO:0046906 GO:0048037 GO:0050896 GO:0051186 GO:0051187 GO:0055114 GO:0072593 GO:0097159 GO:1901363
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003278.t1	XP_003594487.1	96.1	355	13	1	1	355	1	354	3.20E-191	677.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003278.t1	P24102	58.7	310	127	1	24	332	26	335	5.7e-104	379.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003278.t1	A4UN77	96.1	355	13	1	1	355	1	354	2.3e-191	677.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene74564	MS.gene003278	PPI
MS.gene74565	MS.gene003278	PPI
MS.gene00369	MS.gene003278	PPI
MS.gene02087	MS.gene003278	PPI
MS.gene02077	MS.gene003278	PPI
MS.gene61089	MS.gene003278	PPI
MS.gene006133	MS.gene003278	PPI
MS.gene003278	MS.gene74558	PPI
MS.gene003274	MS.gene003278	PPI
MS.gene003278	MS.gene47556	PPI
MS.gene003278	MS.gene03128	PPI
MS.gene073417	MS.gene003278	PPI
MS.gene74555	MS.gene003278	PPI
MS.gene02083	MS.gene003278	PPI
MS.gene003278	MS.gene02082	PPI
MS.gene03130	MS.gene003278	PPI
MS.gene74560	MS.gene003278	PPI
MS.gene24236	MS.gene003278	PPI
MS.gene003284	MS.gene003278	PPI
MS.gene03140	MS.gene003278	PPI
MS.gene03136	MS.gene003278	PPI
MS.gene003278	MS.gene003288	PPI
MS.gene03134	MS.gene003278	PPI
MS.gene27263	MS.gene003278	PPI
MS.gene03137	MS.gene003278	PPI
MS.gene03133	MS.gene003278	PPI
MS.gene003278	MS.gene003233	PPI
MS.gene03138	MS.gene003278	PPI
MS.gene95116	MS.gene003278	PPI
MS.gene003286	MS.gene003278	PPI
MS.gene60708	MS.gene003278	PPI
MS.gene74567	MS.gene003278	PPI
MS.gene003278	MS.gene003276	PPI
MS.gene88899	MS.gene003278	PPI
MS.gene39552	MS.gene003278	PPI
MS.gene27001	MS.gene003278	PPI
MS.gene003278	MS.gene003289	PPI
MS.gene74559	MS.gene003278	PPI
MS.gene03131	MS.gene003278	PPI
MS.gene012725	MS.gene003278	PPI
MS.gene43409	MS.gene003278	PPI
MS.gene90718	MS.gene003278	PPI
MS.gene003278	MS.gene003287	PPI
MS.gene003278	MS.gene02079	PPI
MS.gene74557	MS.gene003278	PPI
MS.gene003278	MS.gene26424	PPI
MS.gene74553	MS.gene003278	PPI
MS.gene74556	MS.gene003278	PPI
MS.gene003278	MS.gene004650	PPI
MS.gene74597	MS.gene003278	PPI
MS.gene003278	MS.gene58646	PPI
MS.gene003278	MS.gene02080	PPI
MS.gene003278	MS.gene03131	PPI
MS.gene74566	MS.gene003278	PPI
MS.gene003278	MS.gene003283	PPI
MS.gene003275	MS.gene003278	PPI
MS.gene003278	MS.gene02084	PPI
MS.gene003278	MS.gene03132	PPI
MS.gene042104	MS.gene003278	PPI
MS.gene02089	MS.gene003278	PPI
MS.gene02036	MS.gene003278	PPI
MS.gene02086	MS.gene003278	PPI
MS.gene003278	MS.gene006132	PPI
MS.gene003278	MS.gene003285	PPI
MS.gene02085	MS.gene003278	PPI
MS.gene003278	MS.gene74556	PPI
MS.gene003278	MS.gene02076	PPI
MS.gene03127	MS.gene003278	PPI
MS.gene003278	MS.gene02078	PPI
MS.gene26607	MS.gene003278	PPI
MS.gene003278	MS.gene003274	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003278.t1	MTR_2g029750	96.056	355	13	1	1	355	1	354	0.0	695
MS.gene003278.t1	MTR_2g029740	86.197	355	49	0	1	355	1	355	0.0	634
MS.gene003278.t1	MTR_2g028980	76.620	355	83	0	1	355	1	355	0.0	565
MS.gene003278.t1	MTR_2g029800	72.958	355	94	1	1	355	1	353	0.0	528
MS.gene003278.t1	MTR_2g029815	72.394	355	95	2	1	355	1	352	0.0	518
MS.gene003278.t1	MTR_2g029820	69.296	355	109	0	1	355	1	355	0.0	508
MS.gene003278.t1	MTR_2g029830	68.994	358	105	3	1	355	1	355	2.14e-174	489
MS.gene003278.t1	MTR_2g029860	66.573	356	115	3	1	355	1	353	1.04e-166	469
MS.gene003278.t1	MTR_2g029850	64.689	354	122	1	1	354	1	351	1.04e-162	459
MS.gene003278.t1	MTR_2g029910	63.559	354	124	2	3	355	4	353	2.08e-159	451
MS.gene003278.t1	MTR_2g029560	64.286	336	115	1	1	336	1	331	1.46e-157	446
MS.gene003278.t1	MTR_2g029730	64.653	331	112	1	6	336	7	332	2.82e-153	435
MS.gene003278.t1	MTR_2g029830	71.378	283	80	1	74	355	5	287	4.73e-144	409
MS.gene003278.t1	MTR_7g093370	57.655	307	129	1	25	330	65	371	2.43e-122	357
MS.gene003278.t1	MTR_1g054205	55.305	311	138	1	21	330	16	326	1.14e-118	346
MS.gene003278.t1	MTR_5g021060	51.325	302	146	1	29	330	30	330	4.69e-106	314
MS.gene003278.t1	MTR_8g076820	49.671	304	152	1	27	330	28	330	3.01e-103	307
MS.gene003278.t1	MTR_7g072510	46.769	325	156	3	6	330	5	312	5.26e-101	301
MS.gene003278.t1	MTR_4g125940	50.000	312	152	2	21	330	20	329	6.84e-101	301
MS.gene003278.t1	MTR_1g022970	49.338	302	153	0	29	330	46	347	1.21e-97	293
MS.gene003278.t1	MTR_3g094650	50.637	314	144	4	15	326	14	318	3.76e-97	291
MS.gene003278.t1	MTR_2g040000	48.366	306	153	2	28	330	28	331	1.11e-96	290
MS.gene003278.t1	MTR_2g084020	47.134	314	158	2	17	330	13	318	1.65e-96	290
MS.gene003278.t1	MTR_4g029170	46.855	318	158	4	15	330	13	321	2.57e-95	286
MS.gene003278.t1	MTR_2g084110	46.273	322	164	2	9	330	5	317	4.94e-95	286
MS.gene003278.t1	MTR_5g017860	49.180	305	151	3	27	330	25	326	6.47e-95	286
MS.gene003278.t1	MTR_7g072480	48.525	305	148	2	26	330	21	316	1.97e-94	284
MS.gene003278.t1	MTR_4g122640	47.855	303	153	3	29	330	38	336	2.85e-94	284
MS.gene003278.t1	MTR_2g084010	47.557	307	153	2	24	330	20	318	3.07e-94	284
MS.gene003278.t1	MTR_2g084000	48.197	305	150	2	26	330	23	319	3.17e-94	284
MS.gene003278.t1	MTR_4g029190	49.838	309	141	6	26	330	42	340	4.15e-94	284
MS.gene003278.t1	MTR_2g084080	45.938	320	164	2	11	330	7	317	8.43e-94	283
MS.gene003278.t1	MTR_4g029200	47.910	311	151	4	21	330	38	338	2.75e-93	282
MS.gene003278.t1	MTR_3g072190	48.185	303	148	2	28	330	25	318	3.53e-93	281
MS.gene003278.t1	MTR_5g017850	49.020	306	150	4	27	330	25	326	6.06e-93	281
MS.gene003278.t1	MTR_5g083860	47.742	310	149	6	24	330	26	325	1.08e-92	280
MS.gene003278.t1	MTR_5g074970	47.892	332	160	4	3	330	4	326	2.23e-92	279
MS.gene003278.t1	MTR_3g466200	46.296	324	158	6	10	330	10	320	1.04e-91	277
MS.gene003278.t1	MTR_4g125940	51.636	275	129	2	58	330	2	274	1.68e-91	275
MS.gene003278.t1	MTR_4g029180	47.176	301	148	4	32	330	30	321	1.81e-90	274
MS.gene003278.t1	MTR_3g094670	46.951	328	159	5	1	326	4	318	2.42e-89	271
MS.gene003278.t1	MTR_4g083710	46.104	308	156	3	26	330	24	324	4.79e-89	271
MS.gene003278.t1	MTR_3g094630	46.988	332	161	5	1	330	4	322	2.37e-88	269
MS.gene003278.t1	MTR_4g030890	44.013	309	168	3	24	332	95	398	5.99e-88	271
MS.gene003278.t1	MTR_1g115900	43.125	320	171	4	13	330	11	321	7.90e-88	268
MS.gene003278.t1	MTR_5g049280	42.899	338	184	6	1	330	1	337	1.27e-87	268
MS.gene003278.t1	MTR_5g074860	46.104	308	155	4	25	329	25	324	1.57e-86	264
MS.gene003278.t1	MTR_4g031140	41.987	312	176	3	25	336	24	330	1.61e-86	265
MS.gene003278.t1	MTR_2g084090	43.963	323	171	3	9	330	5	318	2.00e-86	264
MS.gene003278.t1	MTR_3g466180	45.455	308	159	2	23	330	25	323	5.52e-86	263
MS.gene003278.t1	MTR_5g014100	46.104	308	152	3	32	330	29	331	1.03e-85	262
MS.gene003278.t1	MTR_2g008710	46.885	305	151	5	30	330	28	325	1.33e-85	262
MS.gene003278.t1	MTR_5g074740	45.312	320	164	5	15	331	11	322	2.12e-85	261
MS.gene003278.t1	MTR_5g074760	45.000	320	165	5	15	331	11	322	7.77e-85	260
MS.gene003278.t1	MTR_4g046713	42.598	331	182	4	1	330	3	326	2.67e-83	256
MS.gene003278.t1	MTR_4g074995	45.130	308	146	5	26	330	21	308	1.09e-82	254
MS.gene003278.t1	MTR_5g074710	44.062	320	168	5	15	331	11	322	6.77e-82	252
MS.gene003278.t1	MTR_3g467600	44.375	320	168	3	14	330	12	324	3.90e-81	250
MS.gene003278.t1	MTR_3g092990	41.509	318	183	2	14	330	11	326	4.28e-81	250
MS.gene003278.t1	MTR_7g086820	42.484	306	167	5	27	332	18	314	8.08e-81	249
MS.gene003278.t1	MTR_7g107520	43.750	320	174	4	11	330	7	320	2.34e-80	248
MS.gene003278.t1	MTR_2g437770	45.485	299	151	6	33	330	54	341	2.58e-80	249
MS.gene003278.t1	MTR_4g074990	43.865	326	152	7	9	330	7	305	4.20e-80	247
MS.gene003278.t1	MTR_2g029880	58.879	214	74	3	141	354	9	208	1.25e-79	243
MS.gene003278.t1	MTR_7g026990	42.617	298	161	3	33	330	35	322	1.71e-79	246
MS.gene003278.t1	MTR_2g088770	42.320	319	176	6	15	330	12	325	2.11e-79	246
MS.gene003278.t1	MTR_4g133800	43.813	299	157	6	34	331	46	334	1.07e-78	244
MS.gene003278.t1	MTR_4g114210	41.875	320	174	5	16	330	8	320	2.86e-77	240
MS.gene003278.t1	MTR_4g095450	45.192	312	155	8	21	326	19	320	5.61e-76	237
MS.gene003278.t1	MTR_8g075100	39.739	307	177	4	24	330	21	319	6.37e-76	237
MS.gene003278.t1	MTR_4g074980	42.415	323	150	7	9	330	7	294	1.72e-75	235
MS.gene003278.t1	MTR_1g086320	39.091	330	195	4	5	330	6	333	2.07e-75	236
MS.gene003278.t1	MTR_5g022870	40.252	318	178	8	14	330	10	316	5.62e-75	234
MS.gene003278.t1	MTR_5g016010	39.339	333	193	6	1	329	1	328	8.52e-75	234
MS.gene003278.t1	MTR_1g025980	41.722	302	167	6	29	329	24	317	1.11e-74	234
MS.gene003278.t1	MTR_3g072190	47.104	259	128	2	72	330	2	251	5.33e-74	229
MS.gene003278.t1	MTR_1g086490	37.982	337	196	3	5	330	6	340	8.91e-74	232
MS.gene003278.t1	MTR_1g009750	42.345	307	169	6	28	330	26	328	2.91e-73	230
MS.gene003278.t1	MTR_1g101830	41.042	307	173	5	25	330	23	322	4.26e-73	229
MS.gene003278.t1	MTR_4g087965	42.623	305	168	5	28	327	41	343	4.78e-73	230
MS.gene003278.t1	MTR_7g029030	40.841	333	181	8	1	330	1	320	7.18e-73	229
MS.gene003278.t1	MTR_1g038680	41.914	303	168	6	33	330	33	332	1.39e-72	229
MS.gene003278.t1	MTR_6g043460	43.322	307	161	6	32	336	39	334	4.37e-72	228
MS.gene003278.t1	MTR_6g027440	39.748	317	182	6	14	330	7	314	5.50e-71	224
MS.gene003278.t1	MTR_4g132490	39.394	330	192	5	4	330	3	327	1.76e-70	223
MS.gene003278.t1	MTR_2g008160	39.871	311	175	6	25	330	20	323	6.22e-70	221
MS.gene003278.t1	MTR_1g077000	40.264	303	166	7	29	330	39	327	1.29e-69	221
MS.gene003278.t1	MTR_7g086870	39.474	304	168	6	29	330	22	311	1.62e-69	220
MS.gene003278.t1	MTR_6g043240	42.138	318	165	7	33	349	46	345	1.95e-69	221
MS.gene003278.t1	MTR_3g092990	39.623	318	178	4	14	330	11	315	5.03e-69	219
MS.gene003278.t1	MTR_4g074980	46.094	256	125	6	9	260	7	253	7.43e-69	216
MS.gene003278.t1	MTR_6g043280	40.752	319	165	7	17	332	37	334	7.89e-69	219
MS.gene003278.t1	MTR_0155s0040	37.309	327	186	6	4	330	8	315	7.92e-69	218
MS.gene003278.t1	MTR_4g127670	40.924	303	169	6	28	326	23	319	1.72e-67	215
MS.gene003278.t1	MTR_1g090760	38.924	316	185	7	21	331	19	331	7.92e-65	209
MS.gene003278.t1	MTR_5g074860	39.286	308	137	4	25	329	25	285	1.33e-64	207
MS.gene003278.t1	MTR_2g008730	41.311	305	144	5	30	330	28	301	2.33e-64	206
MS.gene003278.t1	MTR_5g033470	38.710	310	181	6	27	330	71	377	1.76e-63	207
MS.gene003278.t1	MTR_1g009750	39.088	307	162	7	28	330	26	311	2.28e-63	204
MS.gene003278.t1	MTR_3g105790	39.032	310	179	4	24	330	20	322	2.15e-61	199
MS.gene003278.t1	MTR_2g099175	35.922	309	186	5	28	331	35	336	9.98e-61	198
MS.gene003278.t1	MTR_0286s0010	38.065	310	183	6	25	330	30	334	2.61e-60	197
MS.gene003278.t1	MTR_6g008075	38.065	310	183	6	25	330	30	334	2.61e-60	197
MS.gene003278.t1	MTR_2g067440	35.435	333	181	6	27	329	58	386	5.91e-60	198
MS.gene003278.t1	MTR_8g062780	36.452	310	189	4	25	330	19	324	8.49e-59	193
MS.gene003278.t1	MTR_2g078610	34.943	352	188	8	14	327	55	403	1.15e-58	195
MS.gene003278.t1	MTR_2g077990	34.943	352	188	8	14	327	55	403	2.31e-58	194
MS.gene003278.t1	MTR_4g132110	37.134	307	182	4	32	335	35	333	3.57e-58	192
MS.gene003278.t1	MTR_1g066710	35.179	307	188	4	27	330	25	323	6.04e-57	188
MS.gene003278.t1	MTR_1g066380	35.179	307	188	4	27	330	25	323	9.57e-57	187
MS.gene003278.t1	MTR_4g132110	36.859	312	181	6	32	335	35	338	2.29e-56	187
MS.gene003278.t1	MTR_2g078280	35.191	341	180	8	14	316	55	392	2.54e-55	186
MS.gene003278.t1	MTR_1g066680	35.505	307	186	5	27	330	25	322	3.55e-55	184
MS.gene003278.t1	MTR_1g066640	35.179	307	188	4	27	330	25	323	4.47e-55	183
MS.gene003278.t1	MTR_2g067450	36.482	307	185	5	27	329	9	309	7.47e-55	182
MS.gene003278.t1	MTR_2g008160	35.048	311	155	6	25	330	20	288	1.24e-52	176
MS.gene003278.t1	MTR_0147s0010	32.530	332	172	5	26	329	74	381	2.82e-49	170
MS.gene003278.t1	MTR_3g072210	46.354	192	94	3	140	330	55	238	3.65e-48	162
MS.gene003278.t1	MTR_5g074700	42.060	233	110	6	102	331	5	215	5.60e-46	156
MS.gene003278.t1	MTR_1g066380	36.015	261	156	4	73	330	3	255	1.41e-45	156
MS.gene003278.t1	MTR_3g105790	39.256	242	141	3	92	330	8	246	1.19e-42	149
MS.gene003278.t1	MTR_7g072490	39.759	249	87	5	75	323	2	187	2.50e-42	146
MS.gene003278.t1	MTR_2g008160	44.118	170	91	3	25	194	20	185	7.91e-42	145
MS.gene003278.t1	MTR_3g072260	53.636	110	51	0	28	137	25	134	9.49e-33	119
MS.gene003278.t1	MTR_2g029930	55.752	113	22	3	14	112	4	102	1.39e-30	112
MS.gene003278.t1	MTR_5g058120	40.491	163	84	3	164	326	6	155	3.79e-28	110
MS.gene003278.t1	MTR_2g078560	29.646	226	126	4	135	329	96	319	5.59e-27	108
MS.gene003278.t1	MTR_7g086790	34.715	193	102	5	76	267	17	186	1.91e-24	99.4
MS.gene003278.t1	MTR_2g077980	28.102	274	157	8	91	327	11	281	1.91e-22	95.9
MS.gene003278.t1	MTR_3g462850	38.028	142	83	5	193	330	9	149	1.86e-20	87.0
MS.gene003278.t1	MTR_1g089005	38.060	134	69	3	14	141	7	132	9.62e-20	85.1
MS.gene003278.t1	MTR_4g031040	33.140	172	71	3	91	262	4	131	1.82e-19	84.0
MS.gene003278.t1	MTR_1g098320	45.055	91	48	1	251	341	47	135	3.58e-19	83.2
MS.gene003278.t1	MTR_6g048160	57.746	71	26	2	68	138	22	88	1.74e-16	74.3
MS.gene003278.t1	MTR_3g088160	26.236	263	156	7	63	314	121	356	3.55e-16	79.3
MS.gene003278.t1	MTR_4g012865	46.667	75	40	0	26	100	74	148	3.74e-16	75.1
MS.gene003278.t1	MTR_3g088160	26.236	263	156	7	63	314	121	356	4.34e-16	79.3
MS.gene003278.t1	MTR_4g114220	46.753	77	31	2	56	132	30	96	4.81e-16	74.7
MS.gene003278.t1	MTR_3g107060	28.235	255	137	9	61	314	106	315	3.84e-15	75.9
MS.gene003278.t1	MTR_5g074770	39.773	88	52	1	242	329	22	108	1.19e-13	67.0
MS.gene003278.t1	MTR_7g086810	33.884	121	54	1	27	147	4	98	1.27e-13	70.1
MS.gene003278.t1	MTR_5g022510	28.814	236	118	10	89	313	22	218	5.64e-12	65.5
MS.gene003278.t1	MTR_5g022510	28.814	236	118	10	89	313	47	243	5.78e-12	65.9
MS.gene003278.t1	MTR_7g107500	43.902	82	43	2	249	330	19	97	1.60e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003278.t1	AT2G38380	58.900	309	126	1	25	332	27	335	4.02e-134	386
MS.gene003278.t1	AT2G38390	56.958	309	132	1	25	332	27	335	4.69e-130	376
MS.gene003278.t1	AT5G06720	54.259	317	145	0	14	330	17	333	9.22e-123	357
MS.gene003278.t1	AT4G08780	53.438	320	147	2	25	342	20	339	2.62e-120	351
MS.gene003278.t1	AT4G08770	54.062	320	145	2	25	342	20	339	8.97e-120	350
MS.gene003278.t1	AT5G06730	50.610	328	162	0	14	341	18	345	3.24e-119	349
MS.gene003278.t1	AT3G32980	52.553	333	149	3	25	355	27	352	1.45e-117	344
MS.gene003278.t1	AT3G49120	51.952	333	151	3	25	355	28	353	1.84e-115	339
MS.gene003278.t1	AT3G49110	51.952	333	151	3	25	355	29	354	1.41e-114	337
MS.gene003278.t1	AT5G19880	50.625	320	150	5	15	330	14	329	1.15e-107	318
MS.gene003278.t1	AT5G66390	47.561	328	167	2	3	330	11	333	1.50e-103	308
MS.gene003278.t1	AT4G36430	47.188	320	161	2	11	330	19	330	3.67e-103	307
MS.gene003278.t1	AT2G18140	46.645	313	162	2	18	330	28	335	1.28e-101	303
MS.gene003278.t1	AT2G18150	46.689	302	160	1	29	330	36	336	4.07e-100	299
MS.gene003278.t1	AT1G44970	49.518	311	155	1	20	330	38	346	7.88e-100	299
MS.gene003278.t1	AT1G14550	49.180	305	147	3	27	330	24	321	1.92e-98	295
MS.gene003278.t1	AT5G19890	50.327	306	144	4	27	330	28	327	7.22e-95	286
MS.gene003278.t1	AT3G50990	47.078	308	162	1	24	331	36	342	8.88e-95	286
MS.gene003278.t1	AT5G05340	48.039	306	148	4	27	330	28	324	4.16e-93	281
MS.gene003278.t1	AT1G49570	46.474	312	160	4	20	328	41	348	1.17e-92	281
MS.gene003278.t1	AT1G14540	47.319	317	160	3	14	330	6	315	5.30e-91	275
MS.gene003278.t1	AT4G16270	47.667	300	150	5	33	330	54	348	1.40e-89	273
MS.gene003278.t1	AT5G58400	45.752	306	154	5	25	327	26	322	1.30e-87	267
MS.gene003278.t1	AT5G64120	44.910	334	171	7	1	330	4	328	7.66e-87	265
MS.gene003278.t1	AT4G37530	46.129	310	160	5	25	330	23	329	3.93e-86	263
MS.gene003278.t1	AT2G35380	47.682	302	154	3	33	330	34	335	1.02e-85	263
MS.gene003278.t1	AT1G68850	45.066	304	161	6	32	330	33	335	6.30e-85	261
MS.gene003278.t1	AT2G22420	42.308	312	175	3	29	340	23	329	1.30e-84	259
MS.gene003278.t1	AT5G58390	45.246	305	155	5	25	326	17	312	8.44e-84	257
MS.gene003278.t1	AT1G71695	47.403	308	150	6	29	333	44	342	1.50e-83	258
MS.gene003278.t1	AT5G17820	40.379	317	176	6	14	330	10	313	2.89e-82	253
MS.gene003278.t1	AT5G17820	40.379	317	176	6	14	330	63	366	5.33e-81	251
MS.gene003278.t1	AT4G25980	41.718	326	175	6	10	330	11	326	2.92e-80	248
MS.gene003278.t1	AT3G03670	41.118	304	176	2	27	330	21	321	5.52e-80	247
MS.gene003278.t1	AT4G37520	43.831	308	166	5	27	330	25	329	4.24e-79	245
MS.gene003278.t1	AT2G41480	43.974	307	160	5	29	330	29	328	1.32e-78	244
MS.gene003278.t1	AT3G21770	41.613	310	175	5	20	327	20	325	3.50e-78	243
MS.gene003278.t1	AT4G37520	43.506	308	164	6	27	330	25	326	5.19e-78	243
MS.gene003278.t1	AT5G39580	43.072	332	171	8	1	330	4	319	2.61e-77	240
MS.gene003278.t1	AT4G11290	39.818	329	193	4	4	330	1	326	7.10e-77	239
MS.gene003278.t1	AT1G05260	40.361	332	189	6	1	330	1	325	1.43e-76	239
MS.gene003278.t1	AT5G67400	41.083	314	178	5	21	330	19	329	2.66e-76	238
MS.gene003278.t1	AT4G30170	42.581	310	165	7	26	330	24	325	1.03e-75	236
MS.gene003278.t1	AT2G18980	43.492	315	163	8	23	330	17	323	1.73e-75	236
MS.gene003278.t1	AT3G49960	40.426	329	186	6	6	330	7	329	1.92e-75	236
MS.gene003278.t1	AT5G64110	44.408	304	158	5	30	330	35	330	3.02e-75	236
MS.gene003278.t1	AT5G42180	40.867	323	181	7	8	329	3	316	2.04e-74	233
MS.gene003278.t1	AT4G37530	47.287	258	131	4	25	278	23	279	9.11e-74	230
MS.gene003278.t1	AT5G14130	42.284	324	166	8	18	330	17	330	1.69e-73	231
MS.gene003278.t1	AT5G14130	42.284	324	166	8	18	330	58	371	3.63e-73	231
MS.gene003278.t1	AT1G05240	39.542	306	169	6	32	330	29	325	4.29e-73	230
MS.gene003278.t1	AT1G05250	39.542	306	169	6	32	330	29	325	4.29e-73	230
MS.gene003278.t1	AT1G30870	41.311	305	166	6	32	333	54	348	2.73e-71	226
MS.gene003278.t1	AT5G64100	42.193	301	161	6	33	330	41	331	2.74e-71	225
MS.gene003278.t1	AT5G51890	38.111	307	183	5	25	330	22	322	7.25e-71	224
MS.gene003278.t1	AT2G39040	42.308	312	167	7	27	330	44	350	4.27e-68	218
MS.gene003278.t1	AT3G01190	39.739	307	178	6	25	330	21	321	6.25e-68	216
MS.gene003278.t1	AT5G15180	38.111	307	185	5	25	330	27	329	1.44e-67	216
MS.gene003278.t1	AT4G26010	36.728	324	185	7	10	330	3	309	4.83e-67	214
MS.gene003278.t1	AT4G26010	36.728	324	185	7	10	330	31	337	7.63e-67	214
MS.gene003278.t1	AT4G33870	34.118	340	180	6	26	327	65	398	3.83e-66	214
MS.gene003278.t1	AT5G40150	37.975	316	185	5	18	330	21	328	1.18e-65	211
MS.gene003278.t1	AT4G33420	40.064	312	171	8	20	330	29	325	6.09e-65	209
MS.gene003278.t1	AT2G34060	39.935	308	176	6	26	327	39	343	1.15e-64	209
MS.gene003278.t1	AT4G33420	40.064	312	171	8	20	330	76	372	1.88e-64	209
MS.gene003278.t1	AT3G28200	37.621	311	180	6	24	330	16	316	4.03e-64	206
MS.gene003278.t1	AT2G35380	47.368	247	126	3	88	330	1	247	5.48e-64	204
MS.gene003278.t1	AT1G77100	37.500	328	193	6	6	330	1	319	8.11e-64	206
MS.gene003278.t1	AT4G31760	36.364	319	193	4	15	330	15	326	2.07e-62	202
MS.gene003278.t1	AT2G43480	37.458	299	174	5	37	330	45	335	3.48e-62	202
MS.gene003278.t1	AT1G34510	37.888	322	184	6	10	330	3	309	3.96e-62	201
MS.gene003278.t1	AT5G22410	36.721	305	179	9	27	326	26	321	1.99e-61	200
MS.gene003278.t1	AT2G24800	38.636	308	178	5	27	330	29	329	1.64e-60	197
MS.gene003278.t1	AT5G24070	33.832	334	206	6	4	330	10	335	5.69e-60	196
MS.gene003278.t1	AT1G24110	36.533	323	196	6	11	330	6	322	1.05e-58	193
MS.gene003278.t1	AT3G17070	35.952	331	198	8	6	330	17	339	1.63e-58	192
MS.gene003278.t1	AT4G17690	37.255	306	181	5	29	331	26	323	2.01e-58	192
MS.gene003278.t1	AT4G21960	34.911	338	203	7	1	331	1	328	9.21e-58	191
MS.gene003278.t1	AT5G47000	35.179	307	189	5	27	330	31	330	8.07e-57	188
MS.gene003278.t1	AT2G37130	35.922	309	186	5	26	330	27	327	6.79e-56	186
MS.gene003278.t1	AT2G37130	35.974	303	182	5	32	330	2	296	5.78e-55	182
MS.gene003278.t1	AT3G17070	36.090	266	157	8	71	330	18	276	6.81e-43	150
MS.gene003278.t1	AT4G25980	43.316	187	98	4	10	196	56	234	6.98e-42	148
MS.gene003278.t1	AT5G39580	39.286	224	117	5	1	217	4	215	1.44e-39	140
MS.gene003278.t1	AT2G24800	39.881	168	97	1	27	194	29	192	3.17e-31	118
MS.gene003278.t1	AT4G32320	29.297	256	131	9	61	313	115	323	2.38e-16	79.3
MS.gene003278.t1	AT1G77490	26.236	263	156	9	63	314	106	341	3.98e-16	79.3
MS.gene003278.t1	AT1G77490	26.236	263	156	9	63	314	106	341	5.72e-16	79.0
MS.gene003278.t1	AT3G42570	37.037	108	66	2	90	196	43	149	2.23e-13	67.4
MS.gene003278.t1	AT4G08390	24.528	265	158	10	63	314	126	361	2.26e-12	67.8
MS.gene003278.t1	AT4G08390	24.528	265	158	10	63	314	127	362	2.56e-12	67.8
MS.gene003278.t1	AT4G08390	24.528	265	158	10	63	314	127	362	2.56e-12	67.8
MS.gene003278.t1	AT4G08390	24.528	265	158	10	63	314	127	362	2.56e-12	67.8
MS.gene003278.t1	AT4G35970	29.442	197	116	6	47	233	8	191	2.84e-11	63.2

Find 76 sgRNAs with CRISPR-Local

Find 119 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATAAATTCAATGATTAAAA+TGG	0.110406	2.4:-60123609	MS.gene003278:CDS
CAACAATCTTCAAGGTAAAA+AGG	0.173562	2.4:-60123735	MS.gene003278:CDS
ATGATTAAAATGGGTAATAT+TGG	0.268702	2.4:-60123599	MS.gene003278:CDS
AGTTCTGGAAGAAAACATTT+TGG	0.286167	2.4:+60123633	None:intergenic
TTGCAATTGGGGACATGTTT+TGG	0.289423	2.4:+60125395	None:intergenic
TCAGCACAAGAAACTTTATT+AGG	0.299828	2.4:+60124977	None:intergenic
TAACAAGAAATCTTCTGAAT+TGG	0.304436	2.4:-60123528	MS.gene003278:CDS
CTTCTTAAGGAGTTTACATT+TGG	0.313523	2.4:+60125046	None:intergenic
GTAGTTCTTGTCTAATTTAT+CGG	0.315461	2.4:+60123760	None:intergenic
GGTAATATTGGCGTGCTTAC+CGG	0.321798	2.4:-60123587	MS.gene003278:CDS
GAAATACAATAGATTGCAAT+TGG	0.322953	2.4:+60125382	None:intergenic
AGAATCAATGGAAGGGGATA+TGG	0.347058	2.4:-60123483	MS.gene003278:CDS
ATTTCAGGTGCCCATACATT+AGG	0.348143	2.4:-60123941	MS.gene003278:intron
TCTAATTTCTCCTTTCGTTC+CGG	0.350474	2.4:+60123568	None:intergenic
AAAGTTGTTGACAATGCTAA+TGG	0.353968	2.4:+60123664	None:intergenic
TCATTGAATTTATAAAGTTC+TGG	0.362635	2.4:+60123618	None:intergenic
TCTAATTTATCGGGAGTTGT+TGG	0.376029	2.4:+60123770	None:intergenic
ATTAGCATTGTCAACAACTT+TGG	0.377288	2.4:-60123662	MS.gene003278:CDS
TGTAAACTCCTTAAGAAGAT+TGG	0.378763	2.4:-60125041	MS.gene003278:CDS
GATAACATCCAATCTTCTTA+AGG	0.379047	2.4:+60125033	None:intergenic
AAATTGACAACGTTATTTCC+AGG	0.383901	2.4:+60123797	None:intergenic
CTGGTGTTGAGAACAATTCT+TGG	0.390987	2.4:+60123696	None:intergenic
TGCTGTGTAGTAGTTGTGTT+TGG	0.394905	2.4:-60125465	MS.gene003278:CDS
TTATACGACTTCGACAATAC+TGG	0.403889	2.4:-60123887	MS.gene003278:CDS
AACGTGCTCTTCCTAATGTA+TGG	0.403932	2.4:+60123930	None:intergenic
TCCAGGTTGGATCGTTCCAT+TGG	0.412490	2.4:-60124777	MS.gene003278:CDS
CTTGCCAATCAAAATCTTCC+AGG	0.414340	2.4:-60124722	MS.gene003278:CDS
AAATCTGCCTTTGCTGATCA+AGG	0.421581	2.4:-60124674	MS.gene003278:CDS
AAATACAATAGATTGCAATT+GGG	0.425537	2.4:+60125383	None:intergenic
AACTACTACAACAATCTTCA+AGG	0.429163	2.4:-60123743	MS.gene003278:CDS
ATAAATTCAATGATTAAAAT+GGG	0.430148	2.4:-60123608	MS.gene003278:CDS
TAGTTCTTGTCTAATTTATC+GGG	0.443723	2.4:+60123761	None:intergenic
AGTTGATCTAAACTGAAGTT+GGG	0.446411	2.4:+60124698	None:intergenic
CTAATTTATCGGGAGTTGTT+GGG	0.448487	2.4:+60123771	None:intergenic
GAGCTGTTGCTATGAGACTA+AGG	0.449394	2.4:+60125490	None:intergenic
AGCTGGAGTATCTTCTGTTC+TGG	0.449716	2.4:-60124939	MS.gene003278:intron
AAGTTGATCTAAACTGAAGT+TGG	0.456582	2.4:+60124697	None:intergenic
GGATCGTTCCATTGGGAAGA+AGG	0.456683	2.4:-60124769	MS.gene003278:CDS
TGGACGAAGTTGTGCATTTG+AGG	0.456696	2.4:+60125428	None:intergenic
CCAGGTTGGATCGTTCCATT+GGG	0.475791	2.4:-60124776	MS.gene003278:CDS
GTTGGGTCAAGAGTTGGATC+AGG	0.485351	2.4:+60123860	None:intergenic
GATATTCTCACACTTGCAGC+TGG	0.486631	2.4:-60124956	MS.gene003278:CDS
GAATGCCTGCGAGTATCATC+AGG	0.492455	2.4:-60125326	MS.gene003278:CDS
AAGTATGTTGGGTCAAGAGT+TGG	0.500202	2.4:+60123854	None:intergenic
TGTGGCCTCTACAGAATCAA+TGG	0.503705	2.4:-60123495	MS.gene003278:CDS
GTTGATCTAGTAGCACTCTC+AGG	0.513813	2.4:-60124641	MS.gene003278:intron
ATAATCGATCAAGTATGAAA+AGG	0.516016	2.4:+60123906	None:intergenic
CCCAATGGAACGATCCAACC+TGG	0.520261	2.4:+60124776	None:intergenic
CAATGTCCTCAGAATGGACC+TGG	0.522817	2.4:-60123815	MS.gene003278:CDS
AATACAATAGATTGCAATTG+GGG	0.523282	2.4:+60125384	None:intergenic
TGTATTTCAAATCTTAGAGA+AGG	0.529827	2.4:-60125367	MS.gene003278:CDS
AAGTTGTGCATTTGAGGAGA+AGG	0.531405	2.4:+60125434	None:intergenic
TGTGTAGTAGTTGTGTTTGG+AGG	0.538078	2.4:-60125462	MS.gene003278:CDS
CTCTACAGAATCAATGGAAG+GGG	0.548427	2.4:-60123489	MS.gene003278:CDS
AGACTATCCCTTCTTCCCAA+TGG	0.549067	2.4:+60124761	None:intergenic
CAAGAATTGTTCTCAACACC+AGG	0.563743	2.4:-60123695	MS.gene003278:CDS
ACGTGCTCTTCCTAATGTAT+GGG	0.564473	2.4:+60123931	None:intergenic
TCTAAACTGAAGTTGGGACC+TGG	0.569967	2.4:+60124704	None:intergenic
TGAATTGGATCTTGCCAGTG+TGG	0.573722	2.4:-60123513	MS.gene003278:CDS
GCCTCTACAGAATCAATGGA+AGG	0.575446	2.4:-60123491	MS.gene003278:CDS
GGCGTGCTTACCGGAACGAA+AGG	0.578682	2.4:-60123578	MS.gene003278:CDS
CCCTTCCATTGATTCTGTAG+AGG	0.580821	2.4:+60123490	None:intergenic
ATTGCGAGTGAACAAGATGC+TGG	0.589624	2.4:-60125070	MS.gene003278:CDS
ATGCTAATGGTATCTGCACC+TGG	0.593736	2.4:+60123677	None:intergenic
AGTTGTGCATTTGAGGAGAA+GGG	0.593995	2.4:+60125435	None:intergenic
TGATTCTGTAGAGGCCACAC+TGG	0.596280	2.4:+60123499	None:intergenic
TTATTTCCAGGTCCATTCTG+AGG	0.600260	2.4:+60123809	None:intergenic
GTTGAGTCCTTGATCAGCAA+AGG	0.604222	2.4:+60124667	None:intergenic
CCTCTACAGAATCAATGGAA+GGG	0.611293	2.4:-60123490	MS.gene003278:CDS
CAATCAAATTAAGACTGAGG+TGG	0.612704	2.4:-60125011	MS.gene003278:CDS
TGAAGCCTGATGATACTCGC+AGG	0.615935	2.4:+60125321	None:intergenic
GATCGTTCCATTGGGAAGAA+GGG	0.616463	2.4:-60124768	MS.gene003278:CDS
AGCTGTTGCTATGAGACTAA+GGG	0.621943	2.4:+60125491	None:intergenic
TGCTGATCAAGGACTCAACA+CGG	0.632871	2.4:-60124663	MS.gene003278:CDS
TATCAATCAAATTAAGACTG+AGG	0.654516	2.4:-60125014	MS.gene003278:CDS
TATGTATATTCACAGAGTGG+GGG	0.680063	2.4:-60124800	MS.gene003278:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATTATTATTATTATTT+AGG	+	chr2.4:60124374-60124393	None:intergenic	0.0%
!!	ATAAATTCAATGATTAAAAT+GGG	-	chr2.4:60125359-60125378	MS.gene003278:CDS	10.0%
!!	GTAAAATTACTAAAAATAAT+TGG	+	chr2.4:60124069-60124088	None:intergenic	10.0%
!!	TATAAATTCAATGATTAAAA+TGG	-	chr2.4:60125358-60125377	MS.gene003278:CDS	10.0%
!!	TATTAAAATTTAAACTATTG+AGG	-	chr2.4:60124500-60124519	MS.gene003278:intron	10.0%
!!	TATTATTATTATTTAGGAAA+TGG	+	chr2.4:60124368-60124387	None:intergenic	10.0%
!!!	TTTAAATTTTAATATCACTA+TGG	+	chr2.4:60124494-60124513	None:intergenic	10.0%
!!	ATATCATAACAACATAATAA+TGG	-	chr2.4:60124092-60124111	MS.gene003278:intron	15.0%
!!	ATATTATTTATGATTTCAAC+AGG	-	chr2.4:60123836-60123855	MS.gene003278:CDS	15.0%
!!	CGAAAAAAATTATTAACTTT+CGG	+	chr2.4:60123751-60123770	None:intergenic	15.0%
!!	TATTATTTATGATTTCAACA+GGG	-	chr2.4:60123837-60123856	MS.gene003278:CDS	15.0%
!!	TTACAAAGAAATTATCTTAA+CGG	+	chr2.4:60124712-60124731	None:intergenic	15.0%
!!!	AACTTGTTTTATTTATTGTA+TGG	-	chr2.4:60124122-60124141	MS.gene003278:intron	15.0%
!!!	TACTTTTCAAAAAAACTTAT+CGG	+	chr2.4:60124861-60124880	None:intergenic	15.0%
!!	AAATACAATAGATTGCAATT+GGG	+	chr2.4:60123587-60123606	None:intergenic	20.0%
!!	ATGATTAAAATGGGTAATAT+TGG	-	chr2.4:60125368-60125387	MS.gene003278:CDS	20.0%
!!	TCATTGAATTTATAAAGTTC+TGG	+	chr2.4:60125352-60125371	None:intergenic	20.0%
!!!	ATAATATGACATTTTTGAGA+GGG	-	chr2.4:60123790-60123809	MS.gene003278:CDS	20.0%
!!!	ATTTTTTCTATCTTAACACT+CGG	-	chr2.4:60124749-60124768	MS.gene003278:CDS	20.0%
!!!	CTTTATTTATGTAAACATCA+TGG	+	chr2.4:60124445-60124464	None:intergenic	20.0%
!!!	TGCAATTTGTCTTTTTTTAT+TGG	+	chr2.4:60124688-60124707	None:intergenic	20.0%
!	AACAATCTTCAAGGTAAAAA+GGG	-	chr2.4:60125233-60125252	MS.gene003278:intron	25.0%
!	AATACAATAGATTGCAATTG+GGG	+	chr2.4:60123586-60123605	None:intergenic	25.0%
!	ATAATCGATCAAGTATGAAA+AGG	+	chr2.4:60125064-60125083	None:intergenic	25.0%
!	CAAGTTAGTTCAAAATCAAA+TGG	+	chr2.4:60124643-60124662	None:intergenic	25.0%
!	GAAATACAATAGATTGCAAT+TGG	+	chr2.4:60123588-60123607	None:intergenic	25.0%
!	GTAGTTCTTGTCTAATTTAT+CGG	+	chr2.4:60125210-60125229	None:intergenic	25.0%
!	TAACAAGAAATCTTCTGAAT+TGG	-	chr2.4:60125439-60125458	MS.gene003278:CDS	25.0%
!	TACATAAATGCTTCAATTTC+AGG	-	chr2.4:60125011-60125030	MS.gene003278:CDS	25.0%
!	TAGTTCTTGTCTAATTTATC+GGG	+	chr2.4:60125209-60125228	None:intergenic	25.0%
!	TATCAATCAAATTAAGACTG+AGG	-	chr2.4:60123953-60123972	MS.gene003278:intron	25.0%
!	TGTATTTCAAATCTTAGAGA+AGG	-	chr2.4:60123600-60123619	MS.gene003278:CDS	25.0%
!!	TTTTATCCGAGTAAACTTAT+CGG	+	chr2.4:60124811-60124830	None:intergenic	25.0%
!!!	CATAATATGACATTTTTGAG+AGG	-	chr2.4:60123789-60123808	MS.gene003278:CDS	25.0%
	AAAACTTATCGGAGTCTTAA+CGG	+	chr2.4:60124850-60124869	None:intergenic	30.0%
	AAAGTAAGTGAACTTTGATG+AGG	-	chr2.4:60124875-60124894	MS.gene003278:intron	30.0%
	AAAGTTGTTGACAATGCTAA+TGG	+	chr2.4:60125306-60125325	None:intergenic	30.0%
	AACTACTACAACAATCTTCA+AGG	-	chr2.4:60125224-60125243	MS.gene003278:intron	30.0%
	AGTTGATCTAAACTGAAGTT+GGG	+	chr2.4:60124272-60124291	None:intergenic	30.0%
	ATCTATGTATATTCACAGAG+TGG	-	chr2.4:60124164-60124183	MS.gene003278:intron	30.0%
	ATTAGCATTGTCAACAACTT+TGG	-	chr2.4:60125305-60125324	MS.gene003278:CDS	30.0%
	CAACAATCTTCAAGGTAAAA+AGG	-	chr2.4:60125232-60125251	MS.gene003278:intron	30.0%
	CTTCTTAAGGAGTTTACATT+TGG	+	chr2.4:60123924-60123943	None:intergenic	30.0%
	GATAACATCCAATCTTCTTA+AGG	+	chr2.4:60123937-60123956	None:intergenic	30.0%
	TAAACTTATCGGAGTCTTAA+CGG	+	chr2.4:60124800-60124819	None:intergenic	30.0%
	TCAGCACAAGAAACTTTATT+AGG	+	chr2.4:60123993-60124012	None:intergenic	30.0%
	TCTATGTATATTCACAGAGT+GGG	-	chr2.4:60124165-60124184	MS.gene003278:intron	30.0%
	TGTAAACTCCTTAAGAAGAT+TGG	-	chr2.4:60123926-60123945	MS.gene003278:CDS	30.0%
!	AAATTGACAACGTTATTTCC+AGG	+	chr2.4:60125173-60125192	None:intergenic	30.0%
!	AAGTTGATCTAAACTGAAGT+TGG	+	chr2.4:60124273-60124292	None:intergenic	30.0%
!	CTTGATGAATTAGTCTATAG+AGG	-	chr2.4:60124553-60124572	MS.gene003278:intron	30.0%
!!	GCAACTGTTTTAAGTATGTT+GGG	+	chr2.4:60125127-60125146	None:intergenic	30.0%
!!	TGCAACTGTTTTAAGTATGT+TGG	+	chr2.4:60125128-60125147	None:intergenic	30.0%
!!!	AGTTCTGGAAGAAAACATTT+TGG	+	chr2.4:60125337-60125356	None:intergenic	30.0%
	AAGACTCCGATAAGTTTACT+CGG	-	chr2.4:60124802-60124821	MS.gene003278:intron	35.0%
	ATCATGTGCTATATAGCTCT+AGG	+	chr2.4:60124975-60124994	None:intergenic	35.0%
	CAAAAACAATGTCCTCAGAA+TGG	-	chr2.4:60125146-60125165	MS.gene003278:intron	35.0%
	CAATCAAATTAAGACTGAGG+TGG	-	chr2.4:60123956-60123975	MS.gene003278:intron	35.0%
	CTAATTTATCGGGAGTTGTT+GGG	+	chr2.4:60125199-60125218	None:intergenic	35.0%
	CTATGTATATTCACAGAGTG+GGG	-	chr2.4:60124166-60124185	MS.gene003278:intron	35.0%
	TAGAGCTATATAGCACATGA+TGG	-	chr2.4:60124974-60124993	MS.gene003278:CDS	35.0%
	TATGTATATTCACAGAGTGG+GGG	-	chr2.4:60124167-60124186	MS.gene003278:intron	35.0%
	TCTAATTTATCGGGAGTTGT+TGG	+	chr2.4:60125200-60125219	None:intergenic	35.0%
	TCTAATTTCTCCTTTCGTTC+CGG	+	chr2.4:60125402-60125421	None:intergenic	35.0%
	TCTTATCTAAATGTCGTCGT+TGG	+	chr2.4:60124410-60124429	None:intergenic	35.0%
	TTATACGACTTCGACAATAC+TGG	-	chr2.4:60125080-60125099	MS.gene003278:CDS	35.0%
!	GAATTAGTCTATAGAGGAGT+AGG	-	chr2.4:60124559-60124578	MS.gene003278:intron	35.0%
!	TCATGTGCTATATAGCTCTA+GGG	+	chr2.4:60124974-60124993	None:intergenic	35.0%
!!!	TGGAAGATTTTGATTGGCAA+GGG	+	chr2.4:60124246-60124265	None:intergenic	35.0%
	AAATCTGCCTTTGCTGATCA+AGG	-	chr2.4:60124293-60124312	MS.gene003278:intron	40.0%
	AACGTGCTCTTCCTAATGTA+TGG	+	chr2.4:60125040-60125059	None:intergenic	40.0%
	AAGTATGTTGGGTCAAGAGT+TGG	+	chr2.4:60125116-60125135	None:intergenic	40.0%
	AAGTTGTGCATTTGAGGAGA+AGG	+	chr2.4:60123536-60123555	None:intergenic	40.0%
	ACGTGCTCTTCCTAATGTAT+GGG	+	chr2.4:60125039-60125058	None:intergenic	40.0%
	AGAATCAATGGAAGGGGATA+TGG	-	chr2.4:60125484-60125503	MS.gene003278:CDS	40.0%
	AGCTGTTGCTATGAGACTAA+GGG	+	chr2.4:60123479-60123498	None:intergenic	40.0%
	AGTTGTGCATTTGAGGAGAA+GGG	+	chr2.4:60123535-60123554	None:intergenic	40.0%
	CAAGAATTGTTCTCAACACC+AGG	-	chr2.4:60125272-60125291	MS.gene003278:intron	40.0%
	CCTCTACAGAATCAATGGAA+GGG	-	chr2.4:60125477-60125496	MS.gene003278:CDS	40.0%
	CTCTACAGAATCAATGGAAG+GGG	-	chr2.4:60125478-60125497	MS.gene003278:CDS	40.0%
	CTTGCCAATCAAAATCTTCC+AGG	-	chr2.4:60124245-60124264	MS.gene003278:intron	40.0%
	TGCTGTGTAGTAGTTGTGTT+TGG	-	chr2.4:60123502-60123521	MS.gene003278:CDS	40.0%
	TGTGTAGTAGTTGTGTTTGG+AGG	-	chr2.4:60123505-60123524	MS.gene003278:CDS	40.0%
	TTATTTCCAGGTCCATTCTG+AGG	+	chr2.4:60125161-60125180	None:intergenic	40.0%
!	ATTTCAGGTGCCCATACATT+AGG	-	chr2.4:60125026-60125045	MS.gene003278:CDS	40.0%
!	CTGGTGTTGAGAACAATTCT+TGG	+	chr2.4:60125274-60125293	None:intergenic	40.0%
!	TTGCAATTGGGGACATGTTT+TGG	+	chr2.4:60123575-60123594	None:intergenic	40.0%
!!!	CATGTTTTGGCGTAAAAGTC+TGG	+	chr2.4:60123562-60123581	None:intergenic	40.0%
!!!	CTGGAAGATTTTGATTGGCA+AGG	+	chr2.4:60124247-60124266	None:intergenic	40.0%
	AGACTATCCCTTCTTCCCAA+TGG	+	chr2.4:60124209-60124228	None:intergenic	45.0%
	ATGCTAATGGTATCTGCACC+TGG	+	chr2.4:60125293-60125312	None:intergenic	45.0%
	ATTGCGAGTGAACAAGATGC+TGG	-	chr2.4:60123897-60123916	MS.gene003278:CDS	45.0%
	GAGCTGTTGCTATGAGACTA+AGG	+	chr2.4:60123480-60123499	None:intergenic	45.0%
	GATATTCTCACACTTGCAGC+TGG	-	chr2.4:60124011-60124030	MS.gene003278:intron	45.0%
	GATCGTTCCATTGGGAAGAA+GGG	-	chr2.4:60124199-60124218	MS.gene003278:intron	45.0%
	GCCTCTACAGAATCAATGGA+AGG	-	chr2.4:60125476-60125495	MS.gene003278:CDS	45.0%
	GGTAATATTGGCGTGCTTAC+CGG	-	chr2.4:60125380-60125399	MS.gene003278:CDS	45.0%
	GTTGAGTCCTTGATCAGCAA+AGG	+	chr2.4:60124303-60124322	None:intergenic	45.0%
	GTTGATCTAGTAGCACTCTC+AGG	-	chr2.4:60124326-60124345	MS.gene003278:intron	45.0%
	TCTAAACTGAAGTTGGGACC+TGG	+	chr2.4:60124266-60124285	None:intergenic	45.0%
	TGAATTGGATCTTGCCAGTG+TGG	-	chr2.4:60125454-60125473	MS.gene003278:CDS	45.0%
	TGCTGATCAAGGACTCAACA+CGG	-	chr2.4:60124304-60124323	MS.gene003278:intron	45.0%
	TGGACGAAGTTGTGCATTTG+AGG	+	chr2.4:60123542-60123561	None:intergenic	45.0%
	TGTGGCCTCTACAGAATCAA+TGG	-	chr2.4:60125472-60125491	MS.gene003278:CDS	45.0%
!	AGCTGGAGTATCTTCTGTTC+TGG	-	chr2.4:60124028-60124047	MS.gene003278:intron	45.0%
!!	CCCTTCCATTGATTCTGTAG+AGG	+	chr2.4:60125480-60125499	None:intergenic	45.0%
!!	GGGACCTGGAAGATTTTGAT+TGG	+	chr2.4:60124252-60124271	None:intergenic	45.0%
	CAATGTCCTCAGAATGGACC+TGG	-	chr2.4:60125152-60125171	MS.gene003278:intron	50.0%
	GAATGCCTGCGAGTATCATC+AGG	-	chr2.4:60123641-60123660	MS.gene003278:CDS	50.0%
	GGATCGTTCCATTGGGAAGA+AGG	-	chr2.4:60124198-60124217	MS.gene003278:intron	50.0%
	GTTGGGTCAAGAGTTGGATC+AGG	+	chr2.4:60125110-60125129	None:intergenic	50.0%
	TGAAGCCTGATGATACTCGC+AGG	+	chr2.4:60123649-60123668	None:intergenic	50.0%
	TGATTCTGTAGAGGCCACAC+TGG	+	chr2.4:60125471-60125490	None:intergenic	50.0%
!	CCAGGTTGGATCGTTCCATT+GGG	-	chr2.4:60124191-60124210	MS.gene003278:intron	50.0%
!	TCCAGGTTGGATCGTTCCAT+TGG	-	chr2.4:60124190-60124209	MS.gene003278:intron	50.0%
	CCCAATGGAACGATCCAACC+TGG	+	chr2.4:60124194-60124213	None:intergenic	55.0%
	TATTCACAGAGTGGGGGTCC+AGG	-	chr2.4:60124173-60124192	MS.gene003278:intron	55.0%
	GGCGTGCTTACCGGAACGAA+AGG	-	chr2.4:60125389-60125408	MS.gene003278:CDS	60.0%
	CACAGAGTGGGGGTCCAGGT+TGG	-	chr2.4:60124177-60124196	MS.gene003278:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	60123469	60125520	60123469	ID=MS.gene003278
chr2.4	mRNA	60123469	60125520	60123469	ID=MS.gene003278.t1;Parent=MS.gene003278
chr2.4	exon	60125299	60125520	60125299	ID=MS.gene003278.t1.exon1;Parent=MS.gene003278.t1
chr2.4	CDS	60125299	60125520	60125299	ID=cds.MS.gene003278.t1;Parent=MS.gene003278.t1
chr2.4	exon	60124940	60125131	60124940	ID=MS.gene003278.t1.exon2;Parent=MS.gene003278.t1
chr2.4	CDS	60124940	60125131	60124940	ID=cds.MS.gene003278.t1;Parent=MS.gene003278.t1
chr2.4	exon	60124642	60124807	60124642	ID=MS.gene003278.t1.exon3;Parent=MS.gene003278.t1
chr2.4	CDS	60124642	60124807	60124642	ID=cds.MS.gene003278.t1;Parent=MS.gene003278.t1
chr2.4	exon	60123469	60123956	60123469	ID=MS.gene003278.t1.exon4;Parent=MS.gene003278.t1
chr2.4	CDS	60123469	60123956	60123469	ID=cds.MS.gene003278.t1;Parent=MS.gene003278.t1

Gene Sequence

>MS.gene003278

ATGAACTCCCTTAGTCTCATAGCAACAGCTCTATGCTGTGTAGTAGTTGTGTTTGGAGGACTACCCTTCTCCTCAAATGCACAACTTCGTCCAGACTTTTACGCCAAAACATGTCCCCAATTGCAATCTATTGTATTTCAAATCTTAGAGAAGGTTTCTAAGACTGATTCTCGAATGCCTGCGAGTATCATCAGGCTTCACTTTCATGATTGTTTCGTTCAAGTATGTATTATATACTCTTTCATTTGTATTTATGATAATGAAAAATAAACAATAGTTCCGAAAGTTAATAATTTTTTTCGTAATTTAAAGTGAAATGACATAATATGACATTTTTGAGAGGGAGTATTAAATAACTTGATTGATGATATTATTTATGATTTCAACAGGGTTGTGATGCATCAGTTTTGTTGAATAACACTGCTACTATTGCGAGTGAACAAGATGCTGGTCCAAATGTAAACTCCTTAAGAAGATTGGATGTTATCAATCAAATTAAGACTGAGGTGGAAAAAGTTTGTCCTAATAAAGTTTCTTGTGCTGATATTCTCACACTTGCAGCTGGAGTATCTTCTGTTCTGGTAAATATGTTAAAAGCCAATTATTTTTAGTAATTTTACATAATATCATAACAACATAATAATGGTTGAATCAACTTGTTTTATTTATTGTATGGTCTTAAAATAACACAAATAATCTATGTATATTCACAGAGTGGGGGTCCAGGTTGGATCGTTCCATTGGGAAGAAGGGATAGTCTAACAGCAAGTCAATCCCTTGCCAATCAAAATCTTCCAGGTCCCAACTTCAGTTTAGATCAACTTAAATCTGCCTTTGCTGATCAAGGACTCAACACGGTTGATCTAGTAGCACTCTCAGGTATGCAAATACATGCACCATTTCCTAAATAATAATAATAATAAAATATAATTTTTTATCCAACGACGACATTTAGATAAGATGATATGAGTCTCCATGATGTTTACATAAATAAAGATTTTAAACTTGAATTTAATCATGAACCATAGTGATATTAAAATTTAAACTATTGAGGAGAGTTGTCACGACTTTAGATTTCACATTACTTGATGAATTAGTCTATAGAGGAGTAGGTTACTCAATTATAAATTATTTTTTAAAAAAATGAATTTAAAAATTAATCTGAAATTCACCATTTGATTTTGAACTAACTTGCTTTGACTTTTGAATAAATTATCCAATAAAAAAAGACAAATTGCATCCGTTAAGATAATTTCTTTGTAAGTGTACAAGCACAATTTATTTTTTCTATCTTAACACTCGGATAAAAAAAAAAAAACAAATTACATCCGTTAAGACTCCGATAAGTTTACTCGGATAAAAAAAAAACAAATTACATCCGTTAAGACTCCGATAAGTTTTTTTGAAAAGTAAGTGAACTTTGATGAGGAATTGTTCGAACTATGATTCAAACTCGAATTCTTTCAAAAAAAAATGTGTATCTTATACTAGATCGTATTAATCCCTAGAGCTATATAGCACATGATGGAAGAGTATATGATTTACATAAATGCTTCAATTTCAGGTGCCCATACATTAGGAAGAGCACGTTGCCTTTTCATACTTGATCGATTATACGACTTCGACAATACTGGCAAACCTGATCCAACTCTTGACCCAACATACTTAAAACAGTTGCAAAAACAATGTCCTCAGAATGGACCTGGAAATAACGTTGTCAATTTTGACCCAACAACTCCCGATAAATTAGACAAGAACTACTACAACAATCTTCAAGGTAAAAAGGGTTTGCTTCAAAGTGACCAAGAATTGTTCTCAACACCAGGTGCAGATACCATTAGCATTGTCAACAACTTTGGAAATAACCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAACGAAAGGAGAAATTAGAAAACAATGCAATTTTGTTAACAAGAAATCTTCTGAATTGGATCTTGCCAGTGTGGCCTCTACAGAATCAATGGAAGGGGATATGGTTAGTTCAATCTAA

Protein sequence

>MS.gene003278.t1

MNSLSLIATALCCVVVVFGGLPFSSNAQLRPDFYAKTCPQLQSIVFQILEKVSKTDSRMPASIIRLHFHDCFVQGCDASVLLNNTATIASEQDAGPNVNSLRRLDVINQIKTEVEKVCPNKVSCADILTLAAGVSSVLSGGPGWIVPLGRRDSLTASQSLANQNLPGPNFSLDQLKSAFADQGLNTVDLVALSGAHTLGRARCLFILDRLYDFDNTGKPDPTLDPTYLKQLQKQCPQNGPGNNVVNFDPTTPDKLDKNYYNNLQGKKGLLQSDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGVLTGTKGEIRKQCNFVNKKSSELDLASVASTESMEGDMVSSI