AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003276

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003276.t1 MTR_2g029740 96.620 355 12 0 1 355 1 355 0.0 711
MS.gene003276.t1 MTR_2g029750 85.915 355 49 1 1 355 1 354 0.0 628
MS.gene003276.t1 MTR_2g028980 79.718 355 72 0 1 355 1 355 0.0 587
MS.gene003276.t1 MTR_2g029800 76.056 355 83 1 1 355 1 353 0.0 548
MS.gene003276.t1 MTR_2g029820 73.239 355 95 0 1 355 1 355 0.0 536
MS.gene003276.t1 MTR_2g029815 73.803 355 90 2 1 355 1 352 0.0 527
MS.gene003276.t1 MTR_2g029830 70.112 358 101 3 1 355 1 355 6.24e-176 493
MS.gene003276.t1 MTR_2g029850 67.232 354 113 1 1 354 1 351 3.43e-169 475
MS.gene003276.t1 MTR_2g029860 67.887 355 110 3 1 354 1 352 4.36e-168 473
MS.gene003276.t1 MTR_2g029560 67.560 336 104 1 1 336 1 331 2.64e-167 470
MS.gene003276.t1 MTR_2g029910 64.124 354 122 2 2 354 3 352 2.77e-163 460
MS.gene003276.t1 MTR_2g029730 65.875 337 109 2 1 336 1 332 1.14e-158 448
MS.gene003276.t1 MTR_2g029830 73.498 283 74 1 74 355 5 287 2.29e-147 417
MS.gene003276.t1 MTR_7g093370 58.958 307 125 1 25 330 65 371 1.42e-126 368
MS.gene003276.t1 MTR_1g054205 56.270 311 135 1 21 330 16 326 2.54e-122 355
MS.gene003276.t1 MTR_5g021060 53.642 302 139 1 29 330 30 330 7.69e-111 327
MS.gene003276.t1 MTR_8g076820 50.331 302 149 1 29 330 30 330 4.51e-105 312
MS.gene003276.t1 MTR_4g125940 49.849 331 160 3 2 330 3 329 5.33e-104 309
MS.gene003276.t1 MTR_2g040000 48.693 306 152 2 28 330 28 331 1.71e-99 298
MS.gene003276.t1 MTR_1g022970 50.331 302 150 0 29 330 46 347 1.21e-98 296
MS.gene003276.t1 MTR_3g094650 48.765 324 151 5 5 326 8 318 3.30e-97 291
MS.gene003276.t1 MTR_4g125940 53.455 275 124 2 58 330 2 274 4.79e-96 286
MS.gene003276.t1 MTR_7g072510 45.231 325 161 3 6 330 5 312 2.42e-95 286
MS.gene003276.t1 MTR_5g017860 48.525 305 153 3 27 330 25 326 6.06e-94 283
MS.gene003276.t1 MTR_4g029200 47.742 310 153 2 21 330 38 338 7.97e-94 283
MS.gene003276.t1 MTR_5g074970 48.780 328 155 5 7 330 8 326 2.62e-93 281
MS.gene003276.t1 MTR_3g466200 47.222 324 155 6 10 330 10 320 9.48e-93 280
MS.gene003276.t1 MTR_5g083860 47.249 309 152 4 24 330 26 325 2.25e-92 279
MS.gene003276.t1 MTR_2g084020 46.178 314 161 2 17 330 13 318 2.97e-92 278
MS.gene003276.t1 MTR_3g072190 48.515 303 147 2 28 330 25 318 3.00e-92 278
MS.gene003276.t1 MTR_4g029170 47.170 318 157 4 15 330 13 321 4.29e-92 278
MS.gene003276.t1 MTR_4g029190 49.026 308 145 4 26 330 42 340 5.72e-92 279
MS.gene003276.t1 MTR_2g084080 45.312 320 166 2 11 330 7 317 7.31e-92 278
MS.gene003276.t1 MTR_4g083710 46.224 331 164 5 3 330 5 324 1.27e-91 277
MS.gene003276.t1 MTR_4g122640 47.157 299 153 3 33 330 42 336 2.71e-91 277
MS.gene003276.t1 MTR_5g017850 47.712 306 154 4 27 330 25 326 3.63e-91 276
MS.gene003276.t1 MTR_4g030890 45.307 309 164 3 24 332 95 398 7.69e-91 278
MS.gene003276.t1 MTR_7g072480 48.525 305 148 2 26 330 21 316 2.47e-90 274
MS.gene003276.t1 MTR_4g029180 48.333 300 144 4 33 330 31 321 4.98e-90 273
MS.gene003276.t1 MTR_4g031140 43.590 312 171 3 25 336 24 330 6.18e-90 273
MS.gene003276.t1 MTR_2g084000 47.213 305 153 2 26 330 23 319 8.67e-90 272
MS.gene003276.t1 MTR_2g084010 46.254 307 157 2 24 330 20 318 1.68e-89 271
MS.gene003276.t1 MTR_2g084110 44.720 322 169 2 9 330 5 317 3.26e-89 271
MS.gene003276.t1 MTR_3g094670 46.037 328 162 5 1 326 4 318 6.30e-89 270
MS.gene003276.t1 MTR_2g084090 44.582 323 169 3 9 330 5 318 1.75e-88 269
MS.gene003276.t1 MTR_5g074740 45.625 320 163 4 15 331 11 322 2.36e-88 269
MS.gene003276.t1 MTR_3g094630 46.687 332 162 5 1 330 4 322 2.81e-88 268
MS.gene003276.t1 MTR_5g074760 45.625 320 163 4 15 331 11 322 3.42e-88 268
MS.gene003276.t1 MTR_5g049280 44.000 325 173 6 14 330 14 337 4.22e-88 269
MS.gene003276.t1 MTR_4g046713 44.512 328 171 5 4 330 9 326 1.31e-87 267
MS.gene003276.t1 MTR_1g115900 43.750 320 169 4 13 330 11 321 1.07e-86 265
MS.gene003276.t1 MTR_3g466180 45.779 308 158 2 23 330 25 323 4.85e-86 263
MS.gene003276.t1 MTR_5g014100 46.689 302 157 2 33 330 30 331 6.60e-85 260
MS.gene003276.t1 MTR_5g074710 45.000 320 165 4 15 331 11 322 9.55e-85 259
MS.gene003276.t1 MTR_2g008710 46.026 302 152 5 33 330 31 325 1.36e-84 259
MS.gene003276.t1 MTR_5g074860 45.130 308 158 4 25 329 25 324 3.04e-84 258
MS.gene003276.t1 MTR_4g074995 43.505 331 160 5 3 330 2 308 3.49e-84 258
MS.gene003276.t1 MTR_3g092990 42.453 318 180 2 14 330 11 326 4.44e-83 255
MS.gene003276.t1 MTR_4g133800 45.485 299 152 6 34 331 46 334 4.73e-83 256
MS.gene003276.t1 MTR_2g437770 46.154 299 149 6 33 330 54 341 5.48e-83 256
MS.gene003276.t1 MTR_2g088770 43.711 318 173 5 15 330 12 325 7.56e-83 255
MS.gene003276.t1 MTR_7g107520 43.750 320 174 4 11 330 7 320 1.18e-81 251
MS.gene003276.t1 MTR_4g114210 42.633 319 173 5 16 330 8 320 2.13e-80 248
MS.gene003276.t1 MTR_3g467600 44.337 309 162 3 25 330 23 324 6.10e-80 247
MS.gene003276.t1 MTR_7g086820 42.810 306 166 5 27 332 18 314 7.20e-80 247
MS.gene003276.t1 MTR_4g074990 41.994 331 162 5 3 330 2 305 8.22e-80 246
MS.gene003276.t1 MTR_2g029880 59.346 214 73 3 141 354 9 208 1.62e-79 242
MS.gene003276.t1 MTR_7g026990 41.801 311 171 3 20 330 22 322 2.03e-79 246
MS.gene003276.t1 MTR_1g086320 40.120 334 192 4 1 330 4 333 3.84e-76 238
MS.gene003276.t1 MTR_5g022870 40.881 318 176 8 14 330 10 316 8.39e-76 236
MS.gene003276.t1 MTR_1g101830 40.850 306 175 4 25 330 23 322 1.28e-75 236
MS.gene003276.t1 MTR_4g074980 40.854 328 159 6 3 330 2 294 1.69e-75 235
MS.gene003276.t1 MTR_3g072190 47.876 259 126 2 72 330 2 251 4.76e-75 232
MS.gene003276.t1 MTR_1g086490 39.286 336 191 3 6 330 7 340 6.34e-75 235
MS.gene003276.t1 MTR_8g075100 40.803 299 167 6 33 330 30 319 1.28e-74 233
MS.gene003276.t1 MTR_1g038680 42.384 302 168 5 33 330 33 332 7.88e-74 232
MS.gene003276.t1 MTR_5g016010 37.651 332 200 4 1 329 1 328 9.42e-73 229
MS.gene003276.t1 MTR_4g087965 42.623 305 168 5 28 327 41 343 2.47e-71 226
MS.gene003276.t1 MTR_6g043240 43.574 319 159 8 33 349 46 345 3.68e-71 226
MS.gene003276.t1 MTR_2g008160 40.514 311 173 6 25 330 20 323 5.87e-71 224
MS.gene003276.t1 MTR_4g095450 43.492 315 162 8 21 329 19 323 8.85e-71 224
MS.gene003276.t1 MTR_3g092990 40.252 318 176 3 14 330 11 315 1.27e-70 223
MS.gene003276.t1 MTR_1g025980 40.604 298 168 6 33 329 28 317 1.52e-70 223
MS.gene003276.t1 MTR_1g009750 41.722 302 168 6 33 330 31 328 3.94e-70 222
MS.gene003276.t1 MTR_6g027440 39.688 320 184 6 11 330 4 314 4.86e-70 222
MS.gene003276.t1 MTR_1g077000 40.134 299 164 7 33 330 43 327 9.67e-70 221
MS.gene003276.t1 MTR_6g043280 41.325 317 166 7 17 332 37 334 2.15e-69 221
MS.gene003276.t1 MTR_6g043460 42.581 310 165 6 29 336 36 334 4.07e-69 220
MS.gene003276.t1 MTR_7g029030 38.623 334 187 6 1 330 1 320 6.57e-69 219
MS.gene003276.t1 MTR_0155s0040 36.923 325 186 6 6 330 10 315 6.96e-69 219
MS.gene003276.t1 MTR_4g074980 43.678 261 135 4 3 260 2 253 2.03e-68 215
MS.gene003276.t1 MTR_7g086870 40.000 300 164 6 33 330 26 311 2.82e-68 217
MS.gene003276.t1 MTR_4g132490 38.438 320 187 5 16 330 13 327 3.97e-68 217
MS.gene003276.t1 MTR_2g008730 46.939 245 122 4 90 330 61 301 1.38e-64 207
MS.gene003276.t1 MTR_2g099175 38.188 309 179 6 28 331 35 336 2.98e-64 207
MS.gene003276.t1 MTR_5g033470 39.474 304 175 6 33 330 77 377 3.28e-64 209
MS.gene003276.t1 MTR_4g127670 38.742 302 177 4 28 326 23 319 1.35e-63 205
MS.gene003276.t1 MTR_5g074860 38.312 308 140 4 25 329 25 285 2.46e-63 203
MS.gene003276.t1 MTR_1g090760 36.418 335 205 6 1 331 1 331 1.48e-62 203
MS.gene003276.t1 MTR_2g067440 36.086 327 175 6 33 329 64 386 1.73e-61 202
MS.gene003276.t1 MTR_1g009750 38.411 302 161 7 33 330 31 311 2.59e-60 196
MS.gene003276.t1 MTR_3g105790 37.994 329 188 4 4 330 8 322 4.38e-60 196
MS.gene003276.t1 MTR_2g078610 34.943 352 188 7 14 327 55 403 1.43e-59 197
MS.gene003276.t1 MTR_2g077990 34.943 352 188 7 14 327 55 403 3.64e-59 196
MS.gene003276.t1 MTR_8g062780 36.334 311 188 5 25 330 19 324 2.47e-57 189
MS.gene003276.t1 MTR_1g066710 35.505 307 187 4 27 330 25 323 4.05e-56 186
MS.gene003276.t1 MTR_1g066380 35.831 307 186 4 27 330 25 323 1.00e-55 185
MS.gene003276.t1 MTR_2g078280 35.191 341 180 7 14 316 55 392 1.26e-55 187
MS.gene003276.t1 MTR_4g132110 36.601 306 183 4 33 335 36 333 4.52e-55 184
MS.gene003276.t1 MTR_2g067450 37.209 301 179 6 33 329 15 309 6.03e-55 182
MS.gene003276.t1 MTR_0286s0010 36.129 310 189 6 25 330 30 334 6.74e-55 183
MS.gene003276.t1 MTR_6g008075 36.129 310 189 6 25 330 30 334 6.74e-55 183
MS.gene003276.t1 MTR_2g008160 35.691 311 153 6 25 330 20 288 3.37e-54 180
MS.gene003276.t1 MTR_1g066640 35.505 307 187 4 27 330 25 323 3.74e-54 181
MS.gene003276.t1 MTR_4g132110 36.656 311 181 6 33 335 36 338 1.06e-53 180
MS.gene003276.t1 MTR_1g066680 35.505 307 186 5 27 330 25 322 1.60e-53 179
MS.gene003276.t1 MTR_0147s0010 34.639 332 165 6 26 329 74 381 1.23e-52 179
MS.gene003276.t1 MTR_1g066380 36.398 261 155 4 73 330 3 255 7.71e-46 157
MS.gene003276.t1 MTR_3g072210 45.312 192 96 3 140 330 55 238 5.85e-45 154
MS.gene003276.t1 MTR_5g074700 40.773 233 113 5 102 331 5 215 1.93e-44 152
MS.gene003276.t1 MTR_2g008160 45.294 170 89 3 25 194 20 185 1.95e-43 149
MS.gene003276.t1 MTR_3g105790 39.662 237 139 2 96 330 12 246 7.42e-42 146
MS.gene003276.t1 MTR_7g072490 39.357 249 88 5 75 323 2 187 9.63e-39 137
MS.gene003276.t1 MTR_2g029930 61.062 113 16 3 14 112 4 102 6.68e-36 126
MS.gene003276.t1 MTR_3g072260 56.190 105 46 0 33 137 30 134 6.85e-33 120
MS.gene003276.t1 MTR_2g078560 29.646 226 126 4 135 329 96 319 2.99e-28 112
MS.gene003276.t1 MTR_5g058120 39.264 163 86 3 164 326 6 155 5.99e-26 104
MS.gene003276.t1 MTR_2g077980 29.643 280 145 10 91 327 11 281 3.93e-24 100
MS.gene003276.t1 MTR_7g086790 32.812 192 107 4 76 267 17 186 7.51e-23 94.7
MS.gene003276.t1 MTR_1g089005 39.552 134 67 3 14 141 7 132 1.19e-21 90.5
MS.gene003276.t1 MTR_6g048160 61.972 71 23 2 68 138 22 88 2.69e-20 84.7
MS.gene003276.t1 MTR_3g462850 38.028 142 83 5 193 330 9 149 8.54e-20 85.1
MS.gene003276.t1 MTR_4g031040 31.429 175 76 3 88 262 1 131 2.06e-18 80.9
MS.gene003276.t1 MTR_4g114220 50.000 78 29 2 55 132 29 96 2.26e-18 81.3
MS.gene003276.t1 MTR_1g098320 40.659 91 52 1 251 341 47 135 6.65e-16 74.3
MS.gene003276.t1 MTR_4g012865 48.529 68 35 0 33 100 81 148 3.89e-14 69.7
MS.gene003276.t1 MTR_7g086810 34.711 121 53 1 27 147 4 98 5.31e-14 71.2
MS.gene003276.t1 MTR_7g107500 45.122 82 42 2 249 330 19 97 5.12e-13 64.7
MS.gene003276.t1 MTR_3g088160 26.820 261 153 9 63 312 121 354 6.53e-13 69.7
MS.gene003276.t1 MTR_3g088160 26.820 261 153 9 63 312 121 354 9.26e-13 69.3
MS.gene003276.t1 MTR_5g074770 34.021 97 64 0 233 329 12 108 1.20e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003276.t1 AT2G38380 58.900 309 126 1 25 332 27 335 3.07e-131 379
MS.gene003276.t1 AT2G38390 56.958 309 132 1 25 332 27 335 4.15e-127 369
MS.gene003276.t1 AT4G08770 55.625 320 140 2 25 342 20 339 1.45e-124 362
MS.gene003276.t1 AT5G06720 55.205 317 142 0 14 330 17 333 1.20e-123 359
MS.gene003276.t1 AT4G08780 54.375 320 144 2 25 342 20 339 2.78e-123 358
MS.gene003276.t1 AT5G06730 52.134 328 157 0 14 341 18 345 5.95e-122 356
MS.gene003276.t1 AT3G32980 53.754 333 145 3 25 355 27 352 7.35e-121 353
MS.gene003276.t1 AT3G49120 53.153 333 147 3 25 355 28 353 7.26e-120 350
MS.gene003276.t1 AT3G49110 53.153 333 147 3 25 355 29 354 6.08e-119 348
MS.gene003276.t1 AT5G19880 50.938 320 149 5 15 330 14 329 3.68e-109 322
MS.gene003276.t1 AT5G66390 49.351 308 155 1 23 330 27 333 2.67e-104 310
MS.gene003276.t1 AT1G44970 51.125 311 150 1 20 330 38 346 5.20e-102 305
MS.gene003276.t1 AT5G19890 52.941 306 136 4 27 330 28 327 9.79e-102 303
MS.gene003276.t1 AT4G36430 47.188 320 161 2 11 330 19 330 3.38e-101 302
MS.gene003276.t1 AT2G18140 47.923 313 158 2 18 330 28 335 2.91e-100 300
MS.gene003276.t1 AT2G18150 48.344 302 155 1 29 330 36 336 1.57e-99 298
MS.gene003276.t1 AT1G14550 48.366 306 150 3 26 330 23 321 3.38e-97 291
MS.gene003276.t1 AT3G50990 45.779 308 166 1 24 331 36 342 1.68e-92 280
MS.gene003276.t1 AT1G14540 46.154 325 158 4 6 330 8 315 3.58e-91 276
MS.gene003276.t1 AT1G49570 45.902 305 160 3 27 328 46 348 5.78e-91 276
MS.gene003276.t1 AT5G05340 46.732 306 152 4 27 330 28 324 2.57e-90 274
MS.gene003276.t1 AT2G35380 49.007 302 150 3 33 330 34 335 4.12e-89 271
MS.gene003276.t1 AT5G58390 47.869 305 147 5 25 326 17 312 1.53e-88 269
MS.gene003276.t1 AT4G16270 46.711 304 155 5 29 330 50 348 5.84e-88 269
MS.gene003276.t1 AT1G68850 45.545 303 159 6 33 330 34 335 3.59e-87 266
MS.gene003276.t1 AT5G64120 47.826 299 146 6 33 330 39 328 4.96e-87 266
MS.gene003276.t1 AT5G58400 46.557 305 151 5 25 326 26 321 1.02e-86 265
MS.gene003276.t1 AT4G25980 43.558 326 169 6 10 330 11 326 2.00e-85 261
MS.gene003276.t1 AT2G22420 42.628 312 174 3 29 340 23 329 3.95e-85 261
MS.gene003276.t1 AT3G03670 43.421 304 169 2 27 330 21 321 4.90e-83 255
MS.gene003276.t1 AT1G71695 47.368 304 148 6 33 333 48 342 5.16e-83 256
MS.gene003276.t1 AT5G17820 41.640 317 172 6 14 330 10 313 4.97e-82 252
MS.gene003276.t1 AT2G41480 45.246 305 151 6 33 330 33 328 5.21e-81 250
MS.gene003276.t1 AT5G17820 41.640 317 172 6 14 330 63 366 8.58e-81 251
MS.gene003276.t1 AT3G21770 43.226 310 170 5 20 327 20 325 4.62e-80 248
MS.gene003276.t1 AT4G11290 42.901 324 178 6 10 330 7 326 3.59e-79 245
MS.gene003276.t1 AT1G05260 41.566 332 185 6 1 330 1 325 6.87e-79 245
MS.gene003276.t1 AT4G37530 44.516 310 165 5 25 330 23 329 9.25e-79 244
MS.gene003276.t1 AT5G39580 42.900 331 173 8 1 330 4 319 4.38e-78 243
MS.gene003276.t1 AT5G64100 44.518 301 154 6 33 330 41 331 7.03e-78 242
MS.gene003276.t1 AT2G18980 42.090 335 172 8 2 330 5 323 3.46e-76 238
MS.gene003276.t1 AT1G05240 40.777 309 167 6 29 330 26 325 1.34e-75 236
MS.gene003276.t1 AT1G05250 40.777 309 167 6 29 330 26 325 1.34e-75 236
MS.gene003276.t1 AT4G30170 42.071 309 168 5 26 330 24 325 1.90e-75 236
MS.gene003276.t1 AT5G15180 41.275 298 171 4 33 330 36 329 1.09e-74 234
MS.gene003276.t1 AT5G64110 44.186 301 157 5 33 330 38 330 1.49e-74 234
MS.gene003276.t1 AT3G49960 39.939 328 189 4 6 330 7 329 2.92e-74 233
MS.gene003276.t1 AT3G01190 41.946 298 167 5 33 330 30 321 1.24e-73 231
MS.gene003276.t1 AT5G51890 39.414 307 179 5 25 330 22 322 1.92e-73 231
MS.gene003276.t1 AT4G37520 42.208 308 171 5 27 330 25 329 4.43e-73 230
MS.gene003276.t1 AT5G42180 39.441 322 187 5 8 329 3 316 1.67e-72 228
MS.gene003276.t1 AT4G37520 41.883 308 169 6 27 330 25 326 6.34e-72 227
MS.gene003276.t1 AT1G30870 41.503 306 162 7 33 333 55 348 6.39e-71 225
MS.gene003276.t1 AT5G67400 39.818 329 188 6 6 330 7 329 1.67e-70 223
MS.gene003276.t1 AT5G14130 40.439 319 179 6 18 330 17 330 5.05e-68 217
MS.gene003276.t1 AT4G37530 45.736 258 135 4 25 278 23 279 1.39e-67 214
MS.gene003276.t1 AT5G14130 40.439 319 179 6 18 330 58 371 1.40e-67 217
MS.gene003276.t1 AT4G33870 34.441 331 177 5 33 327 72 398 2.66e-66 215
MS.gene003276.t1 AT4G26010 38.462 325 178 8 10 330 3 309 2.68e-66 212
MS.gene003276.t1 AT1G77100 38.298 329 189 6 6 330 1 319 3.71e-66 212
MS.gene003276.t1 AT2G35380 48.178 247 124 3 88 330 1 247 3.99e-66 209
MS.gene003276.t1 AT4G26010 38.462 325 178 8 10 330 31 337 4.49e-66 212
MS.gene003276.t1 AT2G39040 41.667 312 171 7 26 330 43 350 1.07e-65 212
MS.gene003276.t1 AT4G33420 38.462 325 184 8 6 330 17 325 1.93e-65 210
MS.gene003276.t1 AT4G31760 36.826 334 196 5 2 330 3 326 4.30e-65 209
MS.gene003276.t1 AT4G33420 39.550 311 174 7 20 330 76 372 6.03e-65 210
MS.gene003276.t1 AT2G34060 38.961 308 179 6 26 327 39 343 1.42e-63 206
MS.gene003276.t1 AT5G40150 37.460 315 188 4 18 330 21 328 9.78e-63 203
MS.gene003276.t1 AT5G22410 38.033 305 175 9 27 326 26 321 2.76e-62 202
MS.gene003276.t1 AT2G43480 37.700 313 180 7 25 330 31 335 4.64e-62 202
MS.gene003276.t1 AT3G28200 38.312 308 182 6 24 330 16 316 1.72e-61 200
MS.gene003276.t1 AT5G24070 38.158 304 175 6 32 330 40 335 2.27e-61 200
MS.gene003276.t1 AT2G24800 38.535 314 170 5 27 330 29 329 7.65e-61 198
MS.gene003276.t1 AT4G17690 37.086 302 179 5 33 331 30 323 3.62e-58 191
MS.gene003276.t1 AT1G24110 35.802 324 199 6 10 330 5 322 4.98e-57 188
MS.gene003276.t1 AT1G34510 36.646 322 188 6 10 330 3 309 3.68e-56 186
MS.gene003276.t1 AT3G17070 35.347 331 200 8 6 330 17 339 2.89e-55 184
MS.gene003276.t1 AT4G21960 36.513 304 178 6 33 331 35 328 5.53e-55 183
MS.gene003276.t1 AT5G47000 34.219 301 188 5 33 330 37 330 1.24e-53 180
MS.gene003276.t1 AT2G37130 35.275 309 188 5 26 330 27 327 9.24e-52 175
MS.gene003276.t1 AT2G37130 35.430 302 183 5 33 330 3 296 6.26e-51 172
MS.gene003276.t1 AT4G25980 47.090 189 92 4 10 198 56 236 1.40e-48 165
MS.gene003276.t1 AT5G39580 39.496 238 122 7 1 231 4 226 1.23e-41 145
MS.gene003276.t1 AT3G17070 34.962 266 160 8 71 330 18 276 1.08e-38 139
MS.gene003276.t1 AT2G24800 40.698 172 98 1 27 198 29 196 4.53e-34 126
MS.gene003276.t1 AT4G32320 30.566 265 134 10 49 311 105 321 2.15e-15 76.6
MS.gene003276.t1 AT3G42570 32.877 146 85 4 53 196 15 149 4.18e-14 69.7
MS.gene003276.t1 AT1G77490 26.820 261 153 11 63 312 106 339 7.23e-14 72.8
MS.gene003276.t1 AT1G77490 26.820 261 153 11 63 312 106 339 1.15e-13 72.0
MS.gene003276.t1 AT4G35970 30.000 170 105 5 63 231 33 189 5.11e-11 62.4

Find 78 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTAAGGAGTTGATATT+TGG 0.123659 2.4:+60148010 None:intergenic
CAACAATCTTCAAGGTAAAA+AGG 0.186367 2.4:-60146331 MS.gene003276:CDS
AAACGCTATAGAATGCAATT+TGG 0.223355 2.4:+60148861 None:intergenic
GGTAATATTGACGTGCTTAC+TGG 0.274985 2.4:-60146183 MS.gene003276:CDS
ATTTCAGGTGCTCATACATT+TGG 0.279420 2.4:-60146537 MS.gene003276:intron
ATGCAATTTGGGACAAGTTT+TGG 0.284651 2.4:+60148873 None:intergenic
CCAAATATCAACTCCTTAAG+AGG 0.308669 2.4:-60148010 MS.gene003276:CDS
TAACAAGAAATCGTCTGAAT+TGG 0.326137 2.4:-60146124 MS.gene003276:CDS
TGCTGTGTAGTGGTTGTGTT+TGG 0.336469 2.4:-60148943 MS.gene003276:CDS
AATGAGACTGGCAGGCATTC+GGG 0.339771 2.4:+60148807 None:intergenic
AGAATCAATGGAAGGGGATA+TGG 0.347058 2.4:-60146079 MS.gene003276:CDS
AACGCTATAGAATGCAATTT+GGG 0.358034 2.4:+60148862 None:intergenic
TATAAATTCAATGATAAAGA+TGG 0.372148 2.4:-60146205 MS.gene003276:CDS
TTTCAGGTGCTCATACATTT+GGG 0.380835 2.4:-60146536 MS.gene003276:intron
CCGGTGTTGAGAACAATTCT+TGG 0.387016 2.4:+60146292 None:intergenic
GGCTGGAATATCTTCTGTTC+TGG 0.391319 2.4:-60147903 MS.gene003276:intron
TCAGCACAAGAAACTCTATT+AGG 0.391364 2.4:+60147941 None:intergenic
TTATACAACTTCAACAATAC+TGG 0.396066 2.4:-60146483 MS.gene003276:CDS
TAATGAGACTGGCAGGCATT+CGG 0.405318 2.4:+60148806 None:intergenic
GATAACATCTAATCCTCTTA+AGG 0.407011 2.4:+60147997 None:intergenic
TCCAATGTATCAGGAGTAGT+TGG 0.413628 2.4:+60146366 None:intergenic
CTTGCCAATCAAAATCTTCC+AGG 0.414340 2.4:-60147664 MS.gene003276:CDS
CTATAGCGTTTAAAGTCTTA+CGG 0.418187 2.4:-60148849 MS.gene003276:CDS
AAGTTCTTGTCCAATGTATC+AGG 0.418842 2.4:+60146357 None:intergenic
CAGTCCCATTCTGAGGGCAT+TGG 0.438774 2.4:+60146412 None:intergenic
GAATGCCTGCCAGTCTCATT+AGG 0.438956 2.4:-60148804 MS.gene003276:CDS
AAGTCGATCTAGACTGAAGT+TGG 0.442491 2.4:+60147639 None:intergenic
CCCAACTACTCCTGATACAT+TGG 0.443362 2.4:-60146367 MS.gene003276:CDS
TGGATCAAGTTGTGCATTTG+AGG 0.450793 2.4:+60148906 None:intergenic
AACTTCTACAACAATCTTCA+AGG 0.452391 2.4:-60146339 MS.gene003276:CDS
TGTGTAGTGGTTGTGTTTGG+AGG 0.470520 2.4:-60148940 MS.gene003276:CDS
CTTACGGAAAGTTGCTAAGA+AGG 0.471860 2.4:-60148833 MS.gene003276:CDS
GGGAGGTTCCACTAGGAAGA+AGG 0.478431 2.4:-60147711 MS.gene003276:CDS
CCTAGTGGAACCTCCCAACC+TGG 0.485044 2.4:+60147718 None:intergenic
ATAATCGATCAACGATGAAA+AGG 0.496421 2.4:+60146502 None:intergenic
GTTGTATCAAGAGTTGGATC+GGG 0.497486 2.4:+60146456 None:intergenic
TGTGGCTTCTACAGAATCAA+TGG 0.501409 2.4:-60146091 MS.gene003276:CDS
CAATCAAATTAAGACTAAAG+TGG 0.503151 2.4:-60147975 MS.gene003276:CDS
AAGTATGTTGTATCAAGAGT+TGG 0.504944 2.4:+60146450 None:intergenic
TGCTGATATTCTTACACTTG+CGG 0.504955 2.4:-60147924 MS.gene003276:CDS
GAAACCAATGCCCTCAGAAT+GGG 0.505031 2.4:-60146416 MS.gene003276:CDS
CGAAACCAATGCCCTCAGAA+TGG 0.505051 2.4:-60146417 MS.gene003276:CDS
GATATTCTTACACTTGCGGC+TGG 0.511248 2.4:-60147920 MS.gene003276:CDS
TGTTGTATCAAGAGTTGGAT+CGG 0.517053 2.4:+60146455 None:intergenic
CAATGCCCTCAGAATGGGAC+TGG 0.517664 2.4:-60146411 MS.gene003276:CDS
ATAAATTCAATGATAAAGAT+GGG 0.526528 2.4:-60146204 MS.gene003276:CDS
AAGTTGTGCATTTGAGGAGA+AGG 0.526618 2.4:+60148912 None:intergenic
AGTCGATCTAGACTGAAGTT+GGG 0.526624 2.4:+60147640 None:intergenic
GACGTGCTTACTGGAAAGAA+AGG 0.527798 2.4:-60146174 MS.gene003276:CDS
AAAGCTGCCTTTGCTGCTCA+AGG 0.528126 2.4:-60147616 MS.gene003276:CDS
AAAGCTGTTGACAATGCTAA+TGG 0.537069 2.4:+60146260 None:intergenic
AAAATGAAGCCTAATGAGAC+TGG 0.538497 2.4:+60148795 None:intergenic
AACAGCTTTGTGCTGTGTAG+TGG 0.550343 2.4:-60148953 MS.gene003276:CDS
TGAAGCCTAATGAGACTGGC+AGG 0.550706 2.4:+60148799 None:intergenic
CCAGGTTGGGAGGTTCCACT+AGG 0.552931 2.4:-60147718 MS.gene003276:CDS
GTTGACCTAGTAGCACTCTC+AGG 0.553978 2.4:-60147583 MS.gene003276:intron
TTCTACAGAATCAATGGAAG+GGG 0.555329 2.4:-60146085 MS.gene003276:CDS
TTATTTCCAGTCCCATTCTG+AGG 0.556981 2.4:+60146405 None:intergenic
TATTTCCAGTCCCATTCTGA+GGG 0.558265 2.4:+60146406 None:intergenic
CAAGAATTGTTCTCAACACC+GGG 0.559032 2.4:-60146291 MS.gene003276:CDS
GTTAAGTCCTTGAGCAGCAA+AGG 0.571680 2.4:+60147609 None:intergenic
ATATACCTGAGAGTGCTACT+AGG 0.572149 2.4:+60147578 None:intergenic
CCAATGTATCAGGAGTAGTT+GGG 0.573997 2.4:+60146367 None:intergenic
TCTAGACTGAAGTTGGGACC+TGG 0.575327 2.4:+60147646 None:intergenic
CCAAGAATTGTTCTCAACAC+CGG 0.585556 2.4:-60146292 MS.gene003276:CDS
AGACTATCCCTTCTTCCTAG+TGG 0.587373 2.4:+60147703 None:intergenic
GGAGGTTCCACTAGGAAGAA+GGG 0.591374 2.4:-60147710 MS.gene003276:CDS
AGTTGTGCATTTGAGGAGAA+GGG 0.593995 2.4:+60148913 None:intergenic
TGCTGCTCAAGGACTTAACA+CGG 0.608034 2.4:-60147605 MS.gene003276:CDS
CTTCTACAGAATCAATGGAA+GGG 0.611293 2.4:-60146086 MS.gene003276:CDS
GCTTCTACAGAATCAATGGA+AGG 0.612073 2.4:-60146087 MS.gene003276:CDS
ATGAGACTGGCAGGCATTCG+GGG 0.612771 2.4:+60148808 None:intergenic
TGAATTGGATCTTGCCAGTG+TGG 0.615648 2.4:-60146109 MS.gene003276:CDS
ATGCTAATGGTATCTGCACC+CGG 0.620520 2.4:+60146273 None:intergenic
TGATTCTGTAGAAGCCACAC+TGG 0.644733 2.4:+60146095 None:intergenic
AGCTGTTGCTATGACACGAA+AGG 0.649557 2.4:+60148969 None:intergenic
GATCTATTTCCACAGACTGG+GGG 0.672586 2.4:-60147742 MS.gene003276:intron
TAGTTGGGTCGAAATTGACA+CGG 0.696351 2.4:+60146382 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTAAATTAACAAGAA+AGG + chr2.4:60146621-60146640 None:intergenic 10.0%
!! TAAATGAATGATTTAAATTA+TGG + chr2.4:60148213-60148232 None:intergenic 10.0%
!! TGCAAATTTATTAATTATTT+GGG + chr2.4:60148389-60148408 None:intergenic 10.0%
!! TTGCAAATTTATTAATTATT+TGG + chr2.4:60148390-60148409 None:intergenic 10.0%
!!! AAAAAAAAGTATATTTGTAT+AGG + chr2.4:60147190-60147209 None:intergenic 10.0%
!!! ATACAAATATACTTTTTTTT+TGG - chr2.4:60147190-60147209 MS.gene003276:intron 10.0%
!!! ATATTTTGAAAAATACTTTA+TGG - chr2.4:60146358-60146377 MS.gene003276:CDS 10.0%
!!! TTGAAGTTTTAATAATAATA+TGG + chr2.4:60147622-60147641 None:intergenic 10.0%
!! ATAAATTCAATGATAAAGAT+GGG - chr2.4:60148837-60148856 MS.gene003276:CDS 15.0%
!! ATATTATTTATGATTGAAAC+AGG - chr2.4:60146946-60146965 MS.gene003276:intron 15.0%
!! CTATTTACCATAAATAATTA+AGG - chr2.4:60148348-60148367 MS.gene003276:intron 15.0%
!! TAACCAATAAAAAAGATAAA+TGG - chr2.4:60147797-60147816 MS.gene003276:intron 15.0%
!! TATAAATTCAATGATAAAGA+TGG - chr2.4:60148836-60148855 MS.gene003276:CDS 15.0%
!! TATAGATAACATTTAGAAAA+TGG + chr2.4:60147500-60147519 None:intergenic 15.0%
!! TATTATCTAAATATCATTGT+TGG + chr2.4:60147547-60147566 None:intergenic 15.0%
!! TATTATTTATGATTGAAACA+GGG - chr2.4:60146947-60146966 MS.gene003276:intron 15.0%
!! TTATTTATGGTAAATAGTTA+AGG + chr2.4:60148345-60148364 None:intergenic 15.0%
!! ACTAAAATTTACTTCTCTTT+CGG + chr2.4:60147903-60147922 None:intergenic 20.0%
!! AGTTGATTAAATTCCAATTA+TGG - chr2.4:60146468-60146487 MS.gene003276:CDS 20.0%
!! ATCAAAATCATTGCTTAATA+AGG - chr2.4:60147825-60147844 MS.gene003276:intron 20.0%
!! ATTAAAACTTCAAATTGTTG+AGG - chr2.4:60147629-60147648 MS.gene003276:CDS 20.0%
!! GATATTTAGATAATATGACA+TGG - chr2.4:60147552-60147571 MS.gene003276:intron 20.0%
!! GTTGATTAAATTCCAATTAT+GGG - chr2.4:60146469-60146488 MS.gene003276:CDS 20.0%
!!! AATTTAATCAACTCCTTTTA+TGG + chr2.4:60146461-60146480 None:intergenic 20.0%
!!! ACATCCTTGTTATTATTTTT+TGG - chr2.4:60146513-60146532 MS.gene003276:CDS 20.0%
!!! AGATTTTATATTTAAAGACG+TGG + chr2.4:60148049-60148068 None:intergenic 20.0%
!!! AGTTTTGAAAGAAAACATTT+TGG + chr2.4:60148815-60148834 None:intergenic 20.0%
!!! ATGCCATTTATCTTTTTTAT+TGG + chr2.4:60147803-60147822 None:intergenic 20.0%
!!! TCAACGTAACATAATTTTAA+TGG - chr2.4:60146684-60146703 MS.gene003276:intron 20.0%
!!! TCAAGTTATTATTTTTCACT+AGG - chr2.4:60146743-60146762 MS.gene003276:intron 20.0%
!!! TGATAATGAAAATTAGTCAA+TGG - chr2.4:60146772-60146791 MS.gene003276:intron 20.0%
! AACAATCTTCAAGGTAAAAA+GGG - chr2.4:60148711-60148730 MS.gene003276:intron 25.0%
! AATACCTTCTCTCTAATTTA+AGG - chr2.4:60146843-60146862 MS.gene003276:intron 25.0%
! ACTAACTAACAATATACGTA+GGG - chr2.4:60146551-60146570 MS.gene003276:intron 25.0%
! ACTTGTGCCTTAATTATTTA+TGG + chr2.4:60148358-60148377 None:intergenic 25.0%
! AGAGCCAAAAAATAATAACA+AGG + chr2.4:60146520-60146539 None:intergenic 25.0%
! ATACCTTCTCTCTAATTTAA+GGG - chr2.4:60146844-60146863 MS.gene003276:intron 25.0%
! CAATCAAATTAAGACTAAAG+TGG - chr2.4:60147066-60147085 MS.gene003276:intron 25.0%
! CATAATCAAGATTTCGAATT+TGG - chr2.4:60147583-60147602 MS.gene003276:intron 25.0%
! CTAAAATTTACTTCTCTTTC+GGG + chr2.4:60147902-60147921 None:intergenic 25.0%
! CTAACAAATACATAACTTGA+GGG + chr2.4:60146337-60146356 None:intergenic 25.0%
! TAACAAATACATAACTTGAG+GGG + chr2.4:60146336-60146355 None:intergenic 25.0%
! TCTCTAATCCAATAGTTAAT+TGG + chr2.4:60148286-60148305 None:intergenic 25.0%
! TTATACAACTTCAACAATAC+TGG - chr2.4:60148558-60148577 MS.gene003276:intron 25.0%
! TTTATGAGCCAATTAACTAT+TGG - chr2.4:60148275-60148294 MS.gene003276:intron 25.0%
!! ATTAACTATTGGATTAGAGA+AGG - chr2.4:60148286-60148305 MS.gene003276:intron 25.0%
!! GCAATGACACTATTAATTTT+TGG + chr2.4:60146654-60146673 None:intergenic 25.0%
!! TGTATGTAGTTTTTGTCTTT+TGG - chr2.4:60146901-60146920 MS.gene003276:intron 25.0%
AAAATACGAGTTCGAATCAT+TGG + chr2.4:60147940-60147959 None:intergenic 30.0%
AAACGCTATAGAATGCAATT+TGG + chr2.4:60146183-60146202 None:intergenic 30.0%
AACGCTATAGAATGCAATTT+GGG + chr2.4:60146182-60146201 None:intergenic 30.0%
AACTTCTACAACAATCTTCA+AGG - chr2.4:60148702-60148721 MS.gene003276:intron 30.0%
AAGTATGTTGTATCAAGAGT+TGG + chr2.4:60148594-60148613 None:intergenic 30.0%
ACTATTCATCAAGTCTAAAG+TGG + chr2.4:60147665-60147684 None:intergenic 30.0%
AGAAATGTATTGCCCATAAT+TGG + chr2.4:60146484-60146503 None:intergenic 30.0%
ATAATCGATCAACGATGAAA+AGG + chr2.4:60148542-60148561 None:intergenic 30.0%
CAACAATCTTCAAGGTAAAA+AGG - chr2.4:60148710-60148729 MS.gene003276:intron 30.0%
CACTAACTAACAATATACGT+AGG - chr2.4:60146550-60146569 MS.gene003276:intron 30.0%
GATAACATCTAATCCTCTTA+AGG + chr2.4:60147047-60147066 None:intergenic 30.0%
GCTAACAAATACATAACTTG+AGG + chr2.4:60146338-60146357 None:intergenic 30.0%
TAACAAGAAATCGTCTGAAT+TGG - chr2.4:60148917-60148936 MS.gene003276:CDS 30.0%
TACAAAACTGCTTCAATTTC+AGG - chr2.4:60148489-60148508 MS.gene003276:intron 30.0%
TACGTAAACGTAACCATAAA+AGG - chr2.4:60146445-60146464 MS.gene003276:CDS 30.0%
TAGACTTGATGAATAGTCTA+TGG - chr2.4:60147668-60147687 MS.gene003276:CDS 30.0%
TTCATTTCCCTATGAATCTA+CGG + chr2.4:60147878-60147897 None:intergenic 30.0%
TTTCCCTTAAATTAGAGAGA+AGG + chr2.4:60146850-60146869 None:intergenic 30.0%
! AGTCTTATATTTAGTACCAG+AGG - chr2.4:60148457-60148476 MS.gene003276:intron 30.0%
! CTATAGCGTTTAAAGTCTTA+CGG - chr2.4:60146192-60146211 MS.gene003276:CDS 30.0%
! TTTTGTAAATCATACACCTC+TGG + chr2.4:60148476-60148495 None:intergenic 30.0%
!! TTGTCTTGATTTTTCAGATG+TGG + chr2.4:60146385-60146404 None:intergenic 30.0%
AAAATGAAGCCTAATGAGAC+TGG + chr2.4:60146249-60146268 None:intergenic 35.0%
AAAGCTGTTGACAATGCTAA+TGG + chr2.4:60148784-60148803 None:intergenic 35.0%
AAGTTCTTGTCCAATGTATC+AGG + chr2.4:60148687-60148706 None:intergenic 35.0%
ACCCTTGAAGAAGAGAATTA+GGG - chr2.4:60148147-60148166 MS.gene003276:intron 35.0%
ACTAACAATATACGTAGGGT+TGG - chr2.4:60146555-60146574 MS.gene003276:intron 35.0%
ATGAATAGTCTATGGAGATG+TGG - chr2.4:60147676-60147695 MS.gene003276:CDS 35.0%
CATTGCTTAATAAGGTGACA+AGG - chr2.4:60147833-60147852 MS.gene003276:intron 35.0%
CCAAATATCAACTCCTTAAG+AGG - chr2.4:60147031-60147050 MS.gene003276:intron 35.0%
CTTCTACAGAATCAATGGAA+GGG - chr2.4:60148955-60148974 MS.gene003276:CDS 35.0%
GAAGAAGAGAATTAGGGAAT+TGG - chr2.4:60148153-60148172 MS.gene003276:intron 35.0%
TACCCTTGAAGAAGAGAATT+AGG - chr2.4:60148146-60148165 MS.gene003276:intron 35.0%
TCAGCACAAGAAACTCTATT+AGG + chr2.4:60147103-60147122 None:intergenic 35.0%
TCCCTAATTCTCTTCTTCAA+GGG + chr2.4:60148151-60148170 None:intergenic 35.0%
TCTCGTTAACAACAAAAGAG+AGG - chr2.4:60148066-60148085 MS.gene003276:CDS 35.0%
TCTCTAACCGTAGATTCATA+GGG - chr2.4:60147868-60147887 MS.gene003276:intron 35.0%
TGAATAGTCTATGGAGATGT+GGG - chr2.4:60147677-60147696 MS.gene003276:CDS 35.0%
TGCTGATATTCTTACACTTG+CGG - chr2.4:60147117-60147136 MS.gene003276:intron 35.0%
TGTTGTATCAAGAGTTGGAT+CGG + chr2.4:60148589-60148608 None:intergenic 35.0%
TTCCCTAATTCTCTTCTTCA+AGG + chr2.4:60148152-60148171 None:intergenic 35.0%
TTCTACAGAATCAATGGAAG+GGG - chr2.4:60148956-60148975 MS.gene003276:CDS 35.0%
TTCTCTAACCGTAGATTCAT+AGG - chr2.4:60147867-60147886 MS.gene003276:intron 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.4:60148504-60148523 MS.gene003276:intron 35.0%
! TATTGGATTAGAGAAGGAGA+CGG - chr2.4:60148292-60148311 MS.gene003276:intron 35.0%
! TTTCAGGTGCTCATACATTT+GGG - chr2.4:60148505-60148524 MS.gene003276:intron 35.0%
!! ATGCAATTTGGGACAAGTTT+TGG + chr2.4:60146171-60146190 None:intergenic 35.0%
!! CAAGTTTTGGCGTAAAAGTA+TGG + chr2.4:60146158-60146177 None:intergenic 35.0%
!! CCTCTTAAGGAGTTGATATT+TGG + chr2.4:60147034-60147053 None:intergenic 35.0%
!!! TGGAAGATTTTGATTGGCAA+GGG + chr2.4:60147378-60147397 None:intergenic 35.0%
AAGTCGATCTAGACTGAAGT+TGG + chr2.4:60147405-60147424 None:intergenic 40.0%
AAGTTGTGCATTTGAGGAGA+AGG + chr2.4:60146132-60146151 None:intergenic 40.0%
AGAATCAATGGAAGGGGATA+TGG - chr2.4:60148962-60148981 MS.gene003276:CDS 40.0%
AGTCGATCTAGACTGAAGTT+GGG + chr2.4:60147404-60147423 None:intergenic 40.0%
AGTTGTGCATTTGAGGAGAA+GGG + chr2.4:60146131-60146150 None:intergenic 40.0%
ATCGATCTATTTCCACAGAC+TGG - chr2.4:60147296-60147315 MS.gene003276:intron 40.0%
CAAGAAAGGACCTAGAACAA+AGG + chr2.4:60146607-60146626 None:intergenic 40.0%
CAAGAATTGTTCTCAACACC+GGG - chr2.4:60148750-60148769 MS.gene003276:intron 40.0%
CCAAGAATTGTTCTCAACAC+CGG - chr2.4:60148749-60148768 MS.gene003276:intron 40.0%
CCAATGTATCAGGAGTAGTT+GGG + chr2.4:60148677-60148696 None:intergenic 40.0%
CGTACTGAAACCTTTGTTCT+AGG - chr2.4:60146594-60146613 MS.gene003276:intron 40.0%
CTGCACAAAAAATGCATGAG+AGG - chr2.4:60148317-60148336 MS.gene003276:intron 40.0%
CTTACGGAAAGTTGCTAAGA+AGG - chr2.4:60146208-60146227 MS.gene003276:CDS 40.0%
CTTGCCAATCAAAATCTTCC+AGG - chr2.4:60147377-60147396 MS.gene003276:intron 40.0%
GCTTCTACAGAATCAATGGA+AGG - chr2.4:60148954-60148973 MS.gene003276:CDS 40.0%
GGTAATATTGACGTGCTTAC+TGG - chr2.4:60148858-60148877 MS.gene003276:CDS 40.0%
GTTGTATCAAGAGTTGGATC+GGG + chr2.4:60148588-60148607 None:intergenic 40.0%
TAGTTGGGTCGAAATTGACA+CGG + chr2.4:60148662-60148681 None:intergenic 40.0%
TATTTCCAGTCCCATTCTGA+GGG + chr2.4:60148638-60148657 None:intergenic 40.0%
TCCAATGTATCAGGAGTAGT+TGG + chr2.4:60148678-60148697 None:intergenic 40.0%
TCGATCTATTTCCACAGACT+GGG - chr2.4:60147297-60147316 MS.gene003276:intron 40.0%
TGTGGCTTCTACAGAATCAA+TGG - chr2.4:60148950-60148969 MS.gene003276:CDS 40.0%
TTATTTCCAGTCCCATTCTG+AGG + chr2.4:60148639-60148658 None:intergenic 40.0%
! ATTGGATTAGAGAAGGAGAC+GGG - chr2.4:60148293-60148312 MS.gene003276:intron 40.0%
! TGGATCAAGTTGTGCATTTG+AGG + chr2.4:60146138-60146157 None:intergenic 40.0%
!! ATATACCTGAGAGTGCTACT+AGG + chr2.4:60147466-60147485 None:intergenic 40.0%
!! TATACGTAGGGTTGGTCTAA+AGG - chr2.4:60146563-60146582 MS.gene003276:intron 40.0%
!!! CTGGAAGATTTTGATTGGCA+AGG + chr2.4:60147379-60147398 None:intergenic 40.0%
AACAGCGTGAGAGAAATGGT+TGG + chr2.4:60148186-60148205 None:intergenic 45.0%
AGACTATCCCTTCTTCCTAG+TGG + chr2.4:60147341-60147360 None:intergenic 45.0%
AGCTGTTGCTATGACACGAA+AGG + chr2.4:60146075-60146094 None:intergenic 45.0%
ATGCTAATGGTATCTGCACC+CGG + chr2.4:60148771-60148790 None:intergenic 45.0%
CCAAAACAGCGTGAGAGAAA+TGG + chr2.4:60148190-60148209 None:intergenic 45.0%
CCCAACTACTCCTGATACAT+TGG - chr2.4:60148674-60148693 MS.gene003276:intron 45.0%
CGATCTATTTCCACAGACTG+GGG - chr2.4:60147298-60147317 MS.gene003276:intron 45.0%
GAAACCAATGCCCTCAGAAT+GGG - chr2.4:60148625-60148644 MS.gene003276:intron 45.0%
GACGTGCTTACTGGAAAGAA+AGG - chr2.4:60148867-60148886 MS.gene003276:CDS 45.0%
GATATTCTTACACTTGCGGC+TGG - chr2.4:60147121-60147140 MS.gene003276:intron 45.0%
GATCTATTTCCACAGACTGG+GGG - chr2.4:60147299-60147318 MS.gene003276:intron 45.0%
GGCTGGAATATCTTCTGTTC+TGG - chr2.4:60147138-60147157 MS.gene003276:intron 45.0%
GTTAAGTCCTTGAGCAGCAA+AGG + chr2.4:60147435-60147454 None:intergenic 45.0%
TAATGAGACTGGCAGGCATT+CGG + chr2.4:60146238-60146257 None:intergenic 45.0%
TGAATTGGATCTTGCCAGTG+TGG - chr2.4:60148932-60148951 MS.gene003276:CDS 45.0%
TGATTCTGTAGAAGCCACAC+TGG + chr2.4:60148949-60148968 None:intergenic 45.0%
TGCTGCTCAAGGACTTAACA+CGG - chr2.4:60147436-60147455 MS.gene003276:intron 45.0%
TGCTGTGTAGTGGTTGTGTT+TGG - chr2.4:60146098-60146117 MS.gene003276:CDS 45.0%
TGTGTAGTGGTTGTGTTTGG+AGG - chr2.4:60146101-60146120 MS.gene003276:CDS 45.0%
! AACAGCTTTGTGCTGTGTAG+TGG - chr2.4:60146088-60146107 MS.gene003276:CDS 45.0%
! CCATTTCTCTCACGCTGTTT+TGG - chr2.4:60148187-60148206 MS.gene003276:intron 45.0%
! CCGGTGTTGAGAACAATTCT+TGG + chr2.4:60148752-60148771 None:intergenic 45.0%
! TTGGATTAGAGAAGGAGACG+GGG - chr2.4:60148294-60148313 MS.gene003276:intron 45.0%
!! GGGACCTGGAAGATTTTGAT+TGG + chr2.4:60147384-60147403 None:intergenic 45.0%
AAAGCTGCCTTTGCTGCTCA+AGG - chr2.4:60147425-60147444 MS.gene003276:intron 50.0%
AATGAGACTGGCAGGCATTC+GGG + chr2.4:60146237-60146256 None:intergenic 50.0%
CGAAACCAATGCCCTCAGAA+TGG - chr2.4:60148624-60148643 MS.gene003276:intron 50.0%
GAATGCCTGCCAGTCTCATT+AGG - chr2.4:60146237-60146256 MS.gene003276:CDS 50.0%
GGAGGTTCCACTAGGAAGAA+GGG - chr2.4:60147331-60147350 MS.gene003276:intron 50.0%
GTTGACCTAGTAGCACTCTC+AGG - chr2.4:60147458-60147477 MS.gene003276:intron 50.0%
TCTAGACTGAAGTTGGGACC+TGG + chr2.4:60147398-60147417 None:intergenic 50.0%
TGAAGCCTAATGAGACTGGC+AGG + chr2.4:60146245-60146264 None:intergenic 50.0%
ATGAGACTGGCAGGCATTCG+GGG + chr2.4:60146236-60146255 None:intergenic 55.0%
CAATGCCCTCAGAATGGGAC+TGG - chr2.4:60148630-60148649 MS.gene003276:intron 55.0%
GGGAGGTTCCACTAGGAAGA+AGG - chr2.4:60147330-60147349 MS.gene003276:intron 55.0%
! CAGTCCCATTCTGAGGGCAT+TGG + chr2.4:60148632-60148651 None:intergenic 55.0%
ACAGACTGGGGGTCCAGGTT+GGG - chr2.4:60147310-60147329 MS.gene003276:intron 60.0%
CCTAGTGGAACCTCCCAACC+TGG + chr2.4:60147326-60147345 None:intergenic 60.0%
TTTCCACAGACTGGGGGTCC+AGG - chr2.4:60147305-60147324 MS.gene003276:intron 60.0%
! CCAGGTTGGGAGGTTCCACT+AGG - chr2.4:60147323-60147342 MS.gene003276:intron 60.0%
CAACCTGGACCCCCAGTCTG+TGG + chr2.4:60147311-60147330 None:intergenic 65.0%
CACAGACTGGGGGTCCAGGT+TGG - chr2.4:60147309-60147328 MS.gene003276:intron 65.0%
! GACTGGGGGTCCAGGTTGGG+AGG - chr2.4:60147313-60147332 MS.gene003276:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 60146065 60148998 60146065 ID=MS.gene003276
chr2.4 mRNA 60146065 60148998 60146065 ID=MS.gene003276.t1;Parent=MS.gene003276
chr2.4 exon 60148777 60148998 60148777 ID=MS.gene003276.t1.exon1;Parent=MS.gene003276.t1
chr2.4 CDS 60148777 60148998 60148777 ID=cds.MS.gene003276.t1;Parent=MS.gene003276.t1
chr2.4 exon 60147904 60148095 60147904 ID=MS.gene003276.t1.exon2;Parent=MS.gene003276.t1
chr2.4 CDS 60147904 60148095 60147904 ID=cds.MS.gene003276.t1;Parent=MS.gene003276.t1
chr2.4 exon 60147584 60147749 60147584 ID=MS.gene003276.t1.exon3;Parent=MS.gene003276.t1
chr2.4 CDS 60147584 60147749 60147584 ID=cds.MS.gene003276.t1;Parent=MS.gene003276.t1
chr2.4 exon 60146065 60146552 60146065 ID=MS.gene003276.t1.exon4;Parent=MS.gene003276.t1
chr2.4 CDS 60146065 60146552 60146065 ID=cds.MS.gene003276.t1;Parent=MS.gene003276.t1
Gene Sequence

>MS.gene003276

ATGAACTCCTTTCGTGTCATAGCAACAGCTTTGTGCTGTGTAGTGGTTGTGTTTGGAGGACTACCCTTCTCCTCAAATGCACAACTTGATCCATACTTTTACGCCAAAACTTGTCCCAAATTGCATTCTATAGCGTTTAAAGTCTTACGGAAAGTTGCTAAGAAGGATCCCCGAATGCCTGCCAGTCTCATTAGGCTTCATTTTCATGATTGTTTCGTTCAAGTATGTTTCTATATTATATATGCTGTGCTCTAGTATTTATCATTTACCCCTCAAGTTATGTATTTGTTAGCATATTTTGAAAAATACTTTATGGTCCACATCTGAAAAATCAAGACAACTAAAAGTGCATAAGTATTTTAGTCAAAAAAAAAAATGCATACGTAAACGTAACCATAAAAGGAGTTGATTAAATTCCAATTATGGGCAATACATTTCTTATGCATGTACATCCTTGTTATTATTTTTTGGCTCTTAAAAAATAACACTAACTAACAATATACGTAGGGTTGGTCTAAAGGTAAGACTACGTACTGAAACCTTTGTTCTAGGTCCTTTCTTGTTAATTTAATAATTGTCATATTTGCCAAAAATTAATAGTGTCATTGCTAGTTAATTTTCAACGTAACATAATTTTAATGGATTATATTTTATTTTACTATCTAACTGATAATATTCTCAAGTTATTATTTTTCACTAGGTATTTATGATAATGAAAATTAGTCAATGGTTTAAATGTTTAATTTAGTAAAAAATTTATTCTCTTTCTTTTATTTATAATACCTTCTCTCTAATTTAAGGGAAATGACATAATATGACAATATTTTATGATCATATGTATGTAGTTTTTGTCTTTTGGAGATAGAGCACTAAATAACTTGATATTATTTATGATTGAAACAGGGTTGTGATGCATCAGTTTTGTTGAATAACACTGCTACTATTGTGAGTGAACAAGATGCTTTTCCAAATATCAACTCCTTAAGAGGATTAGATGTTATCAATCAAATTAAGACTAAAGTGGAAAAAGCTTGTCCTAATAGAGTTTCTTGTGCTGATATTCTTACACTTGCGGCTGGAATATCTTCTGTTCTGGTACATATTTTTAGTTTCAAGTATTTTCCTATACAAATATACTTTTTTTTTGGTACAATACATATATACATTTTATTTTAATTAGTTAAGAATATTATTACTTCTTTTATTCACTGTATGATCTTAAAACAATACAATCGATCTATTTCCACAGACTGGGGGTCCAGGTTGGGAGGTTCCACTAGGAAGAAGGGATAGTCTAACAGCAAATCAATCCCTTGCCAATCAAAATCTTCCAGGTCCCAACTTCAGTCTAGATCGACTTAAAGCTGCCTTTGCTGCTCAAGGACTTAACACGGTTGACCTAGTAGCACTCTCAGGTATATATATACATGCACCATTTTCTAAATGTTATCTATAATGATAACAATATAAATTTTTTGTCCAACAATGATATTTAGATAATATGACATGGTTTCTTTTCATAATCAAGATTTCGAATTTGGATATGATCATGAACCATATTATTATTAAAACTTCAAATTGTTGAGGAGAGTTGTCACCACTTTAGACTTGATGAATAGTCTATGGAGATGTGGGTTACTCAATTATAAAAAAATGAGTTTTTTTTTTTTTTATAAAAAAAACAATTGAATTTAGAAAATTAATTTTAAAATCAGTTGACTTTTGAATAACTTAACCAATAAAAAAGATAAATGGCATACATCAAAATCATTGCTTAATAAGGTGACAAGGACAAAAAATAATTCTCTAACCGTAGATTCATAGGGAAATGAAACCCGAAAGAGAAGTAAATTTTAGTCAAAAATTGTTTGACCAATGATTCGAACTCGTATTTTTTTAAAAAATTTCGTAATTATACTTCATAAACTAGTAAAGCTCAATCATTTGATTATAAACACTTTCTCGTAAAAAAGTTATGTTACCACGTCTTTAAATATAAAATCTCGTTAACAACAAAAGAGAGGAATTCAAAAAATGATAGTTGTATTAGATTGTCAAGAATCAATATTGTTTTATAAGTTTACCCTTGAAGAAGAGAATTAGGGAATTGGATCATCTCCAACCATTTCTCTCACGCTGTTTTGGCCATAATTTAAATCATTCATTTACTTTTTTTCTCTCTCTTTTGTGCTGTTTTTTTTTTCTTTTCATTTATGAGCCAATTAACTATTGGATTAGAGAAGGAGACGGGGCTGCACAAAAAATGCATGAGAGGATCCTTAACTATTTACCATAAATAATTAAGGCACAAGTTAGCATGACCCAAATAATTAATAAATTTGCAAATTTAAAATACTATGTTTAATACAAAAGACAATAAAAATCGAAAGAGAGTCTTATATTTAGTACCAGAGGTGTATGATTTACAAAACTGCTTCAATTTCAGGTGCTCATACATTTGGGAGAGCACGTTGCCTTTTCATCGTTGATCGATTATACAACTTCAACAATACTGGCAAACCCGATCCAACTCTTGATACAACATACTTAAAACAGTTGCGAAACCAATGCCCTCAGAATGGGACTGGAAATAACCGTGTCAATTTCGACCCAACTACTCCTGATACATTGGACAAGAACTTCTACAACAATCTTCAAGGTAAAAAGGGTTTGCTTCAAAGTGACCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAGCTTTGCAAATAGCCAAAATGTTTTCTTTCAAAACTTTATAAATTCAATGATAAAGATGGGTAATATTGACGTGCTTACTGGAAAGAAAGGAGAAATTAGAAAACAATGCAATTTTGTTAACAAGAAATCGTCTGAATTGGATCTTGCCAGTGTGGCTTCTACAGAATCAATGGAAGGGGATATGGTTAGTTCAATCTAA
Protein sequence

>MS.gene003276.t1

MNSFRVIATALCCVVVVFGGLPFSSNAQLDPYFYAKTCPKLHSIAFKVLRKVAKKDPRMPASLIRLHFHDCFVQGCDASVLLNNTATIVSEQDAFPNINSLRGLDVINQIKTKVEKACPNRVSCADILTLAAGISSVLTGGPGWEVPLGRRDSLTANQSLANQNLPGPNFSLDRLKAAFAAQGLNTVDLVALSGAHTFGRARCLFIVDRLYNFNNTGKPDPTLDTTYLKQLRNQCPQNGTGNNRVNFDPTTPDTLDKNFYNNLQGKKGLLQSDQELFSTPGADTISIVNSFANSQNVFFQNFINSMIKMGNIDVLTGKKGEIRKQCNFVNKKSSELDLASVASTESMEGDMVSSI