AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02080.t1 MTR_2g029800 98.867 353 4 0 1 353 1 353 0.0 716
MS.gene02080.t1 MTR_2g029820 83.662 355 56 1 1 353 1 355 0.0 614
MS.gene02080.t1 MTR_2g029815 81.020 353 66 1 1 353 1 352 0.0 587
MS.gene02080.t1 MTR_2g029830 82.298 322 57 0 22 343 21 342 0.0 550
MS.gene02080.t1 MTR_2g029740 75.493 355 85 1 1 353 1 355 0.0 542
MS.gene02080.t1 MTR_2g029750 73.446 354 93 1 1 353 1 354 0.0 534
MS.gene02080.t1 MTR_2g028980 71.549 355 99 1 1 353 1 355 0.0 525
MS.gene02080.t1 MTR_2g029850 72.316 354 93 2 1 352 1 351 0.0 518
MS.gene02080.t1 MTR_2g029860 69.209 354 107 2 1 353 1 353 2.17e-176 493
MS.gene02080.t1 MTR_2g029910 66.667 351 114 2 3 352 4 352 3.13e-172 483
MS.gene02080.t1 MTR_2g029830 83.271 269 45 0 75 343 6 274 5.45e-165 462
MS.gene02080.t1 MTR_2g029560 64.928 345 114 2 1 345 1 338 1.11e-161 456
MS.gene02080.t1 MTR_2g029730 65.116 344 111 3 10 353 11 345 7.01e-157 444
MS.gene02080.t1 MTR_7g093370 59.609 307 123 1 25 330 65 371 1.22e-130 378
MS.gene02080.t1 MTR_1g054205 56.270 311 135 1 21 330 16 326 3.83e-126 365
MS.gene02080.t1 MTR_2g040000 52.443 307 141 2 28 331 28 332 4.19e-108 319
MS.gene02080.t1 MTR_4g125940 51.250 320 152 2 14 331 13 330 1.14e-107 318
MS.gene02080.t1 MTR_5g021060 51.325 302 146 1 29 330 30 330 5.41e-107 317
MS.gene02080.t1 MTR_8g076820 49.505 303 152 1 29 331 30 331 1.37e-105 313
MS.gene02080.t1 MTR_5g017860 50.164 305 148 3 27 330 25 326 7.65e-102 303
MS.gene02080.t1 MTR_5g017850 49.180 305 151 3 27 330 25 326 1.56e-100 300
MS.gene02080.t1 MTR_4g125940 55.072 276 120 2 58 331 2 275 3.32e-99 295
MS.gene02080.t1 MTR_3g094650 48.607 323 151 4 6 326 9 318 6.22e-98 293
MS.gene02080.t1 MTR_3g094670 48.476 328 154 4 1 326 4 318 4.61e-96 288
MS.gene02080.t1 MTR_2g084080 45.370 324 168 2 7 330 3 317 8.66e-96 288
MS.gene02080.t1 MTR_3g466200 48.457 324 151 5 10 330 10 320 1.19e-95 287
MS.gene02080.t1 MTR_7g072510 46.711 304 153 2 27 330 18 312 1.13e-94 285
MS.gene02080.t1 MTR_4g083710 48.276 319 155 3 15 330 13 324 1.20e-94 285
MS.gene02080.t1 MTR_5g083860 46.269 335 165 5 1 330 1 325 1.41e-94 285
MS.gene02080.t1 MTR_1g022970 47.351 302 159 0 29 330 46 347 2.58e-94 285
MS.gene02080.t1 MTR_5g074970 47.840 324 156 4 11 330 12 326 2.62e-94 284
MS.gene02080.t1 MTR_4g029200 48.875 311 148 4 21 330 38 338 2.86e-94 284
MS.gene02080.t1 MTR_2g084110 46.154 325 164 4 7 330 3 317 4.33e-94 283
MS.gene02080.t1 MTR_2g084000 48.197 305 150 2 26 330 23 319 4.72e-94 283
MS.gene02080.t1 MTR_4g029170 48.113 318 154 4 15 330 13 321 6.97e-94 283
MS.gene02080.t1 MTR_3g094630 48.193 332 157 4 1 330 4 322 3.63e-93 281
MS.gene02080.t1 MTR_4g029190 45.272 349 163 6 1 330 1 340 1.58e-92 280
MS.gene02080.t1 MTR_4g122640 45.192 312 160 4 20 330 35 336 3.88e-92 279
MS.gene02080.t1 MTR_2g084020 45.370 324 169 2 7 330 3 318 7.86e-92 277
MS.gene02080.t1 MTR_2g084010 45.370 324 169 2 7 330 3 318 2.51e-91 276
MS.gene02080.t1 MTR_3g072190 47.195 303 151 2 28 330 25 318 2.57e-91 276
MS.gene02080.t1 MTR_5g074760 48.377 308 148 5 27 331 23 322 5.53e-91 275
MS.gene02080.t1 MTR_5g074740 48.701 308 147 5 27 331 23 322 6.37e-91 275
MS.gene02080.t1 MTR_4g029180 49.000 300 142 4 33 330 31 321 1.07e-90 275
MS.gene02080.t1 MTR_2g088770 44.828 319 170 5 15 331 12 326 1.13e-90 275
MS.gene02080.t1 MTR_4g046713 43.925 321 172 4 11 330 13 326 8.69e-90 273
MS.gene02080.t1 MTR_4g031140 44.737 304 163 3 29 332 28 326 1.02e-89 273
MS.gene02080.t1 MTR_2g084090 44.308 325 171 3 7 330 3 318 1.55e-89 271
MS.gene02080.t1 MTR_5g049280 44.728 313 168 5 23 331 27 338 1.96e-89 272
MS.gene02080.t1 MTR_1g115900 43.925 321 169 4 13 331 11 322 2.51e-89 271
MS.gene02080.t1 MTR_5g014100 46.535 303 158 2 32 330 29 331 3.58e-89 271
MS.gene02080.t1 MTR_5g074710 48.208 307 148 5 27 330 23 321 6.35e-89 270
MS.gene02080.t1 MTR_4g030890 44.660 309 166 3 24 332 95 398 1.90e-88 272
MS.gene02080.t1 MTR_7g072480 46.032 315 161 2 16 330 11 316 7.33e-88 267
MS.gene02080.t1 MTR_4g074995 46.082 319 149 4 15 330 10 308 1.28e-87 266
MS.gene02080.t1 MTR_3g466180 45.079 315 164 2 16 330 18 323 2.58e-86 263
MS.gene02080.t1 MTR_5g074860 45.031 322 166 4 11 329 11 324 1.98e-85 261
MS.gene02080.t1 MTR_2g008710 44.554 303 155 7 33 330 31 325 4.43e-84 258
MS.gene02080.t1 MTR_3g467600 45.000 320 166 3 14 330 12 324 4.00e-83 255
MS.gene02080.t1 MTR_7g107520 42.188 320 179 4 11 330 7 320 5.81e-83 255
MS.gene02080.t1 MTR_4g114210 41.875 320 174 6 16 330 8 320 6.69e-83 254
MS.gene02080.t1 MTR_4g074990 43.252 326 156 4 8 330 6 305 1.77e-82 253
MS.gene02080.t1 MTR_2g029880 59.346 214 75 3 139 352 7 208 2.47e-82 249
MS.gene02080.t1 MTR_3g092990 40.663 332 191 3 1 331 1 327 6.79e-82 252
MS.gene02080.t1 MTR_4g133800 44.295 298 155 6 34 330 46 333 3.55e-79 246
MS.gene02080.t1 MTR_7g026990 39.432 317 182 3 15 331 17 323 5.79e-79 244
MS.gene02080.t1 MTR_7g086820 41.503 306 170 5 27 332 18 314 4.07e-78 242
MS.gene02080.t1 MTR_2g437770 42.089 316 167 7 21 331 38 342 7.91e-77 240
MS.gene02080.t1 MTR_5g016010 39.458 332 194 4 1 329 1 328 5.31e-76 237
MS.gene02080.t1 MTR_1g101830 42.484 306 170 4 25 330 23 322 9.14e-76 236
MS.gene02080.t1 MTR_1g038680 41.776 304 167 6 33 330 33 332 1.76e-75 236
MS.gene02080.t1 MTR_1g009750 42.157 306 171 4 28 330 26 328 2.26e-75 236
MS.gene02080.t1 MTR_4g074980 40.867 323 157 5 8 330 6 294 1.25e-74 233
MS.gene02080.t1 MTR_5g022870 41.234 308 171 7 24 330 18 316 1.85e-74 233
MS.gene02080.t1 MTR_3g072190 46.718 259 129 2 72 330 2 251 7.31e-74 229
MS.gene02080.t1 MTR_4g087965 42.623 305 168 5 28 327 41 343 7.66e-74 232
MS.gene02080.t1 MTR_1g086490 39.286 336 188 5 8 330 8 340 1.92e-73 231
MS.gene02080.t1 MTR_1g086320 39.759 332 185 6 8 330 8 333 1.93e-73 231
MS.gene02080.t1 MTR_7g029030 42.718 309 167 5 24 330 20 320 2.32e-73 230
MS.gene02080.t1 MTR_2g008160 41.479 311 170 6 25 330 20 323 4.07e-73 230
MS.gene02080.t1 MTR_4g095450 42.395 309 168 5 21 326 19 320 2.50e-72 228
MS.gene02080.t1 MTR_8g075100 39.735 302 174 5 29 330 26 319 3.80e-72 227
MS.gene02080.t1 MTR_4g127670 42.904 303 163 5 28 326 23 319 7.66e-72 226
MS.gene02080.t1 MTR_4g074980 44.922 256 130 3 8 260 6 253 2.52e-71 223
MS.gene02080.t1 MTR_6g043280 39.264 326 178 7 16 332 20 334 1.47e-70 223
MS.gene02080.t1 MTR_6g043240 42.763 304 158 7 29 330 42 331 3.98e-70 223
MS.gene02080.t1 MTR_1g090760 39.692 325 190 5 10 330 8 330 5.48e-70 222
MS.gene02080.t1 MTR_3g092990 38.253 332 188 4 1 331 1 316 8.15e-70 221
MS.gene02080.t1 MTR_1g077000 39.073 302 171 6 29 330 39 327 2.70e-69 220
MS.gene02080.t1 MTR_1g025980 39.867 301 174 4 29 329 24 317 1.01e-68 218
MS.gene02080.t1 MTR_6g027440 37.538 325 190 7 8 330 1 314 1.74e-68 218
MS.gene02080.t1 MTR_7g086870 39.016 305 170 6 29 331 22 312 2.43e-68 217
MS.gene02080.t1 MTR_0155s0040 36.449 321 185 6 10 330 14 315 5.01e-68 216
MS.gene02080.t1 MTR_6g043460 39.667 300 168 6 29 326 36 324 2.27e-66 213
MS.gene02080.t1 MTR_4g132490 36.280 328 201 5 6 330 5 327 1.39e-65 211
MS.gene02080.t1 MTR_5g033470 38.065 310 183 6 27 330 71 377 1.89e-65 212
MS.gene02080.t1 MTR_1g009750 38.889 306 164 5 28 330 26 311 3.07e-65 209
MS.gene02080.t1 MTR_5g074860 39.130 322 146 4 11 329 11 285 5.46e-65 207
MS.gene02080.t1 MTR_2g008730 37.879 330 167 8 7 330 4 301 1.66e-64 207
MS.gene02080.t1 MTR_8g062780 37.097 310 187 4 25 330 19 324 2.13e-64 207
MS.gene02080.t1 MTR_0286s0010 39.355 310 179 6 25 330 30 334 2.76e-64 207
MS.gene02080.t1 MTR_6g008075 39.355 310 179 6 25 330 30 334 2.76e-64 207
MS.gene02080.t1 MTR_2g099175 37.299 311 177 7 28 330 35 335 1.04e-63 206
MS.gene02080.t1 MTR_2g067440 35.522 335 182 6 27 331 58 388 8.56e-63 205
MS.gene02080.t1 MTR_2g078610 35.435 333 180 7 27 327 74 403 5.63e-61 201
MS.gene02080.t1 MTR_2g077990 35.542 332 179 7 27 326 74 402 1.53e-60 200
MS.gene02080.t1 MTR_3g105790 38.889 306 179 3 27 330 23 322 8.64e-60 195
MS.gene02080.t1 MTR_1g066710 37.662 308 181 5 27 331 25 324 2.09e-57 189
MS.gene02080.t1 MTR_2g078280 35.714 322 172 7 27 316 74 392 4.66e-57 190
MS.gene02080.t1 MTR_0147s0010 33.645 321 177 4 29 329 77 381 2.12e-56 188
MS.gene02080.t1 MTR_1g066380 36.688 308 184 4 27 331 25 324 2.29e-56 187
MS.gene02080.t1 MTR_1g066640 37.013 308 183 4 27 331 25 324 3.19e-56 186
MS.gene02080.t1 MTR_2g008160 36.334 311 151 6 25 330 20 288 1.63e-55 183
MS.gene02080.t1 MTR_2g067450 35.831 307 187 5 27 329 9 309 1.67e-55 184
MS.gene02080.t1 MTR_4g132110 35.873 315 191 4 24 335 27 333 3.96e-55 184
MS.gene02080.t1 MTR_1g066680 36.364 308 184 5 27 331 25 323 9.56e-55 182
MS.gene02080.t1 MTR_4g132110 35.312 320 191 5 24 335 27 338 2.21e-53 179
MS.gene02080.t1 MTR_2g008160 46.471 170 87 3 25 194 20 185 3.19e-47 159
MS.gene02080.t1 MTR_5g074700 41.810 232 110 6 102 330 5 214 4.44e-46 156
MS.gene02080.t1 MTR_1g066380 37.452 259 151 4 76 331 6 256 3.15e-45 155
MS.gene02080.t1 MTR_3g072210 45.550 191 95 3 141 330 56 238 4.49e-45 154
MS.gene02080.t1 MTR_3g105790 38.819 237 141 2 96 330 12 246 3.03e-42 147
MS.gene02080.t1 MTR_7g072490 38.000 250 92 4 74 323 1 187 4.68e-40 140
MS.gene02080.t1 MTR_2g029930 59.292 113 18 3 14 112 4 102 8.72e-34 120
MS.gene02080.t1 MTR_3g072260 50.909 110 54 0 28 137 25 134 7.65e-32 117
MS.gene02080.t1 MTR_2g077980 31.317 281 148 11 91 331 11 286 1.22e-28 112
MS.gene02080.t1 MTR_5g058120 38.650 163 87 3 164 326 6 155 4.49e-28 110
MS.gene02080.t1 MTR_2g078560 29.694 229 126 5 135 331 96 321 1.03e-26 108
MS.gene02080.t1 MTR_3g462850 40.559 143 80 5 193 331 9 150 4.38e-24 96.7
MS.gene02080.t1 MTR_7g086790 35.625 160 83 3 76 235 17 156 1.68e-23 96.7
MS.gene02080.t1 MTR_1g089005 41.221 131 63 3 14 138 7 129 1.20e-21 90.5
MS.gene02080.t1 MTR_1g098320 45.783 83 43 1 251 333 47 127 5.17e-17 77.4
MS.gene02080.t1 MTR_4g012865 47.222 72 38 0 29 100 77 148 5.25e-17 77.4
MS.gene02080.t1 MTR_6g048160 53.521 71 29 2 68 138 22 88 5.29e-17 75.9
MS.gene02080.t1 MTR_4g031040 31.429 175 76 3 88 262 1 131 8.51e-17 76.6
MS.gene02080.t1 MTR_4g114220 39.252 107 49 3 56 162 30 120 5.49e-16 74.3
MS.gene02080.t1 MTR_5g074770 40.909 88 51 1 242 329 22 108 2.06e-15 72.0
MS.gene02080.t1 MTR_7g107500 40.594 101 52 4 232 330 3 97 6.30e-13 64.7
MS.gene02080.t1 MTR_7g086810 31.405 121 57 1 27 147 4 98 9.04e-13 67.4
MS.gene02080.t1 MTR_3g088160 29.648 199 112 7 122 314 180 356 1.38e-12 68.6
MS.gene02080.t1 MTR_3g088160 29.648 199 112 7 122 314 180 356 1.86e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02080.t1 AT2G38380 57.273 330 133 3 25 353 27 349 5.48e-131 378
MS.gene02080.t1 AT2G38390 56.061 330 137 3 25 353 27 349 2.64e-130 377
MS.gene02080.t1 AT5G06720 54.890 317 143 0 14 330 17 333 4.47e-128 370
MS.gene02080.t1 AT5G06730 54.375 320 146 0 14 333 18 337 5.85e-128 371
MS.gene02080.t1 AT3G32980 56.308 325 140 2 25 347 27 351 1.46e-125 365
MS.gene02080.t1 AT3G49120 54.867 339 148 3 14 347 14 352 7.69e-125 363
MS.gene02080.t1 AT4G08770 55.657 327 143 2 25 349 20 346 8.99e-125 362
MS.gene02080.t1 AT3G49110 56.308 325 140 2 25 347 29 353 4.40e-123 358
MS.gene02080.t1 AT4G08780 54.375 320 144 2 25 342 20 339 4.30e-121 353
MS.gene02080.t1 AT5G19880 52.751 309 143 2 25 330 21 329 1.01e-112 331
MS.gene02080.t1 AT2G18150 50.000 302 150 1 29 330 36 336 1.69e-105 313
MS.gene02080.t1 AT5G19890 51.961 306 139 4 27 330 28 327 6.58e-105 311
MS.gene02080.t1 AT2G18140 47.866 328 165 3 3 330 14 335 9.13e-105 311
MS.gene02080.t1 AT5G66390 49.026 308 156 1 23 330 27 333 4.72e-104 309
MS.gene02080.t1 AT4G36430 48.701 308 157 1 24 331 25 331 6.45e-102 304
MS.gene02080.t1 AT1G14550 46.828 331 165 4 1 330 1 321 2.50e-99 296
MS.gene02080.t1 AT3G50990 47.883 307 159 1 24 330 36 341 2.92e-99 297
MS.gene02080.t1 AT5G05340 48.860 307 146 3 26 330 27 324 4.81e-98 293
MS.gene02080.t1 AT1G44970 48.355 304 157 0 27 330 43 346 9.45e-98 293
MS.gene02080.t1 AT1G14540 47.634 317 159 2 14 330 6 315 1.11e-93 282
MS.gene02080.t1 AT4G16270 46.405 306 159 4 26 330 47 348 4.07e-93 282
MS.gene02080.t1 AT1G68850 45.659 311 163 5 26 331 27 336 5.04e-92 278
MS.gene02080.t1 AT1G49570 45.902 305 160 3 27 328 46 348 5.72e-92 279
MS.gene02080.t1 AT5G58390 45.570 316 160 4 14 326 6 312 6.25e-88 268
MS.gene02080.t1 AT2G35380 47.682 302 154 3 33 330 34 335 6.25e-88 268
MS.gene02080.t1 AT2G22420 43.269 312 172 3 29 340 23 329 2.91e-87 266
MS.gene02080.t1 AT5G58400 46.349 315 154 5 15 326 19 321 4.00e-87 266
MS.gene02080.t1 AT1G71695 45.455 308 156 6 29 333 44 342 1.07e-83 258
MS.gene02080.t1 AT2G41480 41.194 335 182 7 4 330 1 328 3.46e-83 256
MS.gene02080.t1 AT4G11290 40.240 333 189 6 1 330 1 326 7.69e-82 252
MS.gene02080.t1 AT3G21770 42.405 316 176 5 18 331 18 329 9.19e-82 252
MS.gene02080.t1 AT1G05260 41.368 307 174 5 27 331 24 326 1.20e-81 252
MS.gene02080.t1 AT5G15180 41.639 305 168 5 29 330 32 329 6.59e-81 250
MS.gene02080.t1 AT3G03670 41.694 307 170 4 27 330 21 321 1.28e-80 249
MS.gene02080.t1 AT5G64120 40.719 334 185 7 1 330 4 328 2.37e-80 248
MS.gene02080.t1 AT4G25980 42.025 326 174 6 10 330 11 326 5.65e-80 248
MS.gene02080.t1 AT1G05240 43.182 308 161 5 29 330 26 325 1.07e-79 247
MS.gene02080.t1 AT1G05250 43.182 308 161 5 29 330 26 325 1.07e-79 247
MS.gene02080.t1 AT5G17820 42.295 305 162 7 27 330 22 313 1.28e-79 246
MS.gene02080.t1 AT2G18980 44.410 322 166 6 15 330 9 323 1.79e-79 246
MS.gene02080.t1 AT4G37530 43.689 309 169 3 25 330 23 329 1.99e-79 246
MS.gene02080.t1 AT4G30170 43.506 308 163 5 27 330 25 325 3.72e-79 245
MS.gene02080.t1 AT3G01190 41.066 319 179 7 13 330 11 321 5.89e-79 244
MS.gene02080.t1 AT5G39580 41.692 331 177 7 1 330 4 319 2.31e-78 243
MS.gene02080.t1 AT5G17820 42.295 305 162 7 27 330 75 366 2.46e-78 244
MS.gene02080.t1 AT5G67400 40.549 328 190 3 6 330 4 329 8.03e-78 242
MS.gene02080.t1 AT5G51890 40.729 329 180 7 5 330 6 322 2.23e-77 241
MS.gene02080.t1 AT5G14130 42.368 321 170 7 18 330 17 330 2.81e-76 238
MS.gene02080.t1 AT5G14130 42.368 321 170 7 18 330 58 371 7.34e-76 238
MS.gene02080.t1 AT4G37520 41.368 307 175 3 27 330 25 329 1.86e-74 233
MS.gene02080.t1 AT3G49960 39.877 326 188 4 8 330 9 329 6.22e-74 232
MS.gene02080.t1 AT4G37520 41.042 307 173 4 27 330 25 326 5.60e-73 229
MS.gene02080.t1 AT5G64110 42.525 301 162 5 33 330 38 330 2.50e-71 225
MS.gene02080.t1 AT4G33870 35.843 332 171 5 33 327 72 398 1.17e-70 226
MS.gene02080.t1 AT5G40150 41.026 312 175 4 21 330 24 328 1.31e-70 223
MS.gene02080.t1 AT4G33420 38.390 323 185 7 8 330 17 325 3.37e-70 222
MS.gene02080.t1 AT4G37530 45.914 257 136 2 25 278 23 279 3.96e-70 221
MS.gene02080.t1 AT4G33420 38.390 323 185 7 8 330 64 372 1.24e-69 222
MS.gene02080.t1 AT5G42180 38.182 330 189 6 1 329 1 316 1.00e-68 218
MS.gene02080.t1 AT5G64100 39.535 301 169 6 33 330 41 331 6.68e-68 217
MS.gene02080.t1 AT1G77100 41.290 310 168 6 25 330 20 319 9.49e-68 216
MS.gene02080.t1 AT2G39040 40.064 312 176 6 26 330 43 350 6.28e-67 215
MS.gene02080.t1 AT3G28200 38.188 309 181 4 24 330 16 316 3.68e-66 212
MS.gene02080.t1 AT1G24110 38.438 333 191 6 1 330 1 322 6.16e-66 211
MS.gene02080.t1 AT2G43480 36.994 346 186 10 6 330 1 335 7.40e-66 211
MS.gene02080.t1 AT2G34060 39.542 306 176 6 28 327 41 343 1.25e-65 211
MS.gene02080.t1 AT4G31760 36.446 332 200 5 2 330 3 326 1.04e-64 208
MS.gene02080.t1 AT5G24070 37.908 306 175 7 33 331 39 336 1.30e-64 208
MS.gene02080.t1 AT4G26010 39.103 312 166 9 24 330 17 309 3.48e-64 206
MS.gene02080.t1 AT4G26010 39.423 312 165 9 24 330 45 337 6.58e-64 206
MS.gene02080.t1 AT2G35380 46.154 247 129 3 88 330 1 247 1.07e-63 203
MS.gene02080.t1 AT5G47000 37.621 311 184 5 27 334 31 334 1.14e-63 206
MS.gene02080.t1 AT4G17690 38.511 309 179 5 29 334 26 326 1.89e-63 205
MS.gene02080.t1 AT2G24800 38.312 308 179 5 27 330 29 329 1.73e-62 202
MS.gene02080.t1 AT1G30870 37.342 316 181 7 23 333 45 348 2.64e-62 202
MS.gene02080.t1 AT5G22410 36.393 305 180 7 27 326 26 321 2.48e-59 194
MS.gene02080.t1 AT1G34510 37.705 305 174 6 27 330 20 309 3.95e-57 188
MS.gene02080.t1 AT4G21960 34.524 336 207 5 1 331 1 328 1.08e-56 187
MS.gene02080.t1 AT3G17070 36.826 334 191 10 6 330 17 339 1.74e-56 187
MS.gene02080.t1 AT2G37130 35.922 309 186 5 26 330 27 327 5.79e-54 181
MS.gene02080.t1 AT2G37130 36.424 302 180 5 33 330 3 296 2.33e-53 178
MS.gene02080.t1 AT4G25980 44.444 189 97 4 10 198 56 236 2.23e-46 159
MS.gene02080.t1 AT5G39580 41.262 206 109 4 1 206 4 197 3.31e-42 147
MS.gene02080.t1 AT3G17070 37.175 269 150 10 71 330 18 276 8.82e-41 144
MS.gene02080.t1 AT2G24800 40.698 172 98 1 27 198 29 196 5.12e-35 128
MS.gene02080.t1 AT1G77490 26.996 263 154 8 63 314 106 341 8.14e-14 72.4
MS.gene02080.t1 AT1G77490 26.996 263 154 8 63 314 106 341 1.01e-13 72.4
MS.gene02080.t1 AT4G08390 26.792 265 152 10 63 314 127 362 2.44e-13 70.9
MS.gene02080.t1 AT4G08390 26.792 265 152 10 63 314 127 362 2.44e-13 70.9
MS.gene02080.t1 AT4G08390 26.792 265 152 10 63 314 127 362 2.44e-13 70.9
MS.gene02080.t1 AT4G08390 26.792 265 152 10 63 314 126 361 2.47e-13 70.9
MS.gene02080.t1 AT3G42570 32.624 141 82 4 58 196 20 149 5.48e-13 66.2

Find 79 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTAGAGAGTTGATATT+TGG 0.106972 2.2:+58097959 None:intergenic
CTCCAATCTTCAGGGTAAAA+AGG 0.165515 2.2:-58097284 MS.gene02080:CDS
TCAAAATTGGCGAGGTTATT+TGG 0.171981 2.2:+58097343 None:intergenic
CCTTATGACTTCACGAATAA+TGG 0.227694 2.2:+58100634 None:intergenic
TGAAGCCGCGATGATTAAAA+TGG 0.228661 2.2:-58097158 MS.gene02080:CDS
TGCACAAATTTCCTCAATAT+TGG 0.230077 2.2:-58097852 MS.gene02080:intron
TGCTGCGTAGTGGTTGTTCT+TGG 0.292253 2.2:-58100728 MS.gene02080:CDS
CCTAAGGGAACCTTCCAATT+AGG 0.299457 2.2:+58097735 None:intergenic
GAACTACTACTCCAATCTTC+AGG 0.316728 2.2:-58097293 MS.gene02080:CDS
TTATTTGGTGGTCCGCCATT+AGG 0.328827 2.2:+58097358 None:intergenic
TATTTGGTGGTCCGCCATTA+GGG 0.328859 2.2:+58097359 None:intergenic
GACAGGCAGATGGTCCTAAT+TGG 0.340600 2.2:-58097749 MS.gene02080:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2.2:+58097310 None:intergenic
AGGAGTCGTTGGGTCAAAAT+TGG 0.352540 2.2:+58097330 None:intergenic
CTCTTAGAGAGTTGATATTT+GGG 0.358470 2.2:+58097960 None:intergenic
ATGATTAAAATGGGTAATAT+TGG 0.366146 2.2:-58097148 MS.gene02080:CDS
CGAATAATGGAATGAACCTT+TGG 0.376652 2.2:+58100647 None:intergenic
CAGATGTTGAGAAAAGTTCT+TGG 0.383518 2.2:+58097245 None:intergenic
CCAAATATCAACTCTCTAAG+AGG 0.384268 2.2:-58097959 MS.gene02080:CDS
TATCAACTCTCTAAGAGGTT+TGG 0.404456 2.2:-58097954 MS.gene02080:CDS
TCCGGCTCCATTCAATTCGT+TGG 0.412887 2.2:-58097664 MS.gene02080:CDS
CCATTATTCGTGAAGTCATA+AGG 0.419736 2.2:-58100634 MS.gene02080:CDS
AGTTGATCCAACGAATTGAA+TGG 0.422071 2.2:+58097657 None:intergenic
AACTTGATCCTTCCTTCTAC+AGG 0.427261 2.2:-58100679 MS.gene02080:CDS
TGGACAAGTGTCCCTGTAGA+AGG 0.431111 2.2:+58100667 None:intergenic
AACAACAAAATGAACTCCTT+TGG 0.435964 2.2:-58100770 None:intergenic
TAAACCATCCCTTCTTCCTA+AGG 0.452261 2.2:+58097719 None:intergenic
TGAGGAAATTTGTGCAGAAA+GGG 0.454531 2.2:+58097859 None:intergenic
TTACGCAAAATATGCCCTAA+TGG 0.460673 2.2:-58097373 MS.gene02080:CDS
GTTGTATTAAGAGTTGGATC+AGG 0.467330 2.2:+58097409 None:intergenic
TTGAGGAAATTTGTGCAGAA+AGG 0.469850 2.2:+58097858 None:intergenic
TGCGTAGTGGTTGTTCTTGG+AGG 0.471719 2.2:-58100725 MS.gene02080:CDS
GAACTTGTTGACAATGCTAA+TGG 0.473631 2.2:+58097213 None:intergenic
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.2:+58097890 None:intergenic
AAATAAGTTGTATTAAGAGT+TGG 0.478128 2.2:+58097403 None:intergenic
TTCCACAGATTCATCGGGTA+TGG 0.479176 2.2:-58097038 MS.gene02080:CDS
GGAAGGTTCCCTTAGGAAGA+AGG 0.481031 2.2:-58097728 MS.gene02080:CDS
TCAAATTTATCAGGAGTCGT+TGG 0.486420 2.2:+58097319 None:intergenic
TTGATTCGCAAGTGATTGGT+TGG 0.487720 2.2:+58097692 None:intergenic
AATTCAAAATCAATTGAACT+AGG 0.488523 2.2:-58097076 MS.gene02080:CDS
GGTAATATTGGTGTGCTGAC+CGG 0.495092 2.2:-58097136 MS.gene02080:CDS
AACTACTACTCCAATCTTCA+GGG 0.496833 2.2:-58097292 MS.gene02080:CDS
CAAATTTATCAGGAGTCGTT+GGG 0.501770 2.2:+58097320 None:intergenic
AATGTAGGTGCACATACATT+CGG 0.502427 2.2:-58097490 MS.gene02080:intron
ACTGATCTAGTTGCTCTCTC+AGG 0.506595 2.2:-58097600 MS.gene02080:intron
CCTAATTGGAAGGTTCCCTT+AGG 0.512222 2.2:-58097735 MS.gene02080:CDS
AAATCTGCATTTGCTGCTCA+AGG 0.516203 2.2:-58097633 MS.gene02080:CDS
TGTGGCTTCCACAGATTCAT+CGG 0.516272 2.2:-58097044 MS.gene02080:CDS
TTATACAACTTCAGCAGTAC+AGG 0.516560 2.2:-58097436 MS.gene02080:CDS
GTAATATTGGTGTGCTGACC+GGG 0.523801 2.2:-58097135 MS.gene02080:CDS
ATTCGCAAGTGATTGGTTGG+CGG 0.524300 2.2:+58097695 None:intergenic
GAAGCCGCGATGATTAAAAT+GGG 0.526692 2.2:-58097157 MS.gene02080:CDS
ACTTGCGAATCAAAATCTTC+CGG 0.528410 2.2:-58097682 MS.gene02080:CDS
GCGTAGTGGTTGTTCTTGGA+GGG 0.539622 2.2:-58100724 MS.gene02080:CDS
AAGTTGTGCATCTGAGGAGA+AGG 0.543665 2.2:+58100697 None:intergenic
GTGGCTTCCACAGATTCATC+GGG 0.558019 2.2:-58097043 MS.gene02080:CDS
TCCAACGAATTGAATGGAGC+CGG 0.561618 2.2:+58097663 None:intergenic
ATGAGGCATTACCAATATTG+AGG 0.564329 2.2:+58097841 None:intergenic
AGGATCAAGTTGTGCATCTG+AGG 0.567220 2.2:+58100691 None:intergenic
GAAGGTTCCCTTAGGAAGAA+GGG 0.585149 2.2:-58097727 MS.gene02080:CDS
AAACCATCCCTTCTTCCTAA+GGG 0.593389 2.2:+58097720 None:intergenic
AAATTGGCGAGGTTATTTGG+TGG 0.593812 2.2:+58097346 None:intergenic
CTACAGGGACACTTGTCCAA+AGG 0.594538 2.2:-58100663 MS.gene02080:CDS
TGAACTAGGTCTAGTGAATG+TGG 0.597954 2.2:-58097062 MS.gene02080:CDS
GGCAGATGGTCCTAATTGGA+AGG 0.605173 2.2:-58097745 MS.gene02080:CDS
AACCATACCCGATGAATCTG+TGG 0.607568 2.2:+58097036 None:intergenic
CAAGTGTCCCTGTAGAAGGA+AGG 0.607579 2.2:+58100671 None:intergenic
AGCATCTTGTTCACTCACAA+TGG 0.609683 2.2:+58097985 None:intergenic
GTTCCCTTAGGAAGAAGGGA+TGG 0.614528 2.2:-58097723 MS.gene02080:CDS
AGCTGTCAACGTGAGACCAA+AGG 0.632651 2.2:+58100754 None:intergenic
ACTTGATCCTTCCTTCTACA+GGG 0.634221 2.2:-58100678 MS.gene02080:CDS
AAACCGAATTAAAACAGCAG+TGG 0.636785 2.2:-58097924 MS.gene02080:CDS
TGTATGTATTGACAGGCAGA+TGG 0.639188 2.2:-58097759 MS.gene02080:intron
CGCAAAATATGCCCTAATGG+CGG 0.644342 2.2:-58097370 MS.gene02080:CDS
AGTTGTGCATCTGAGGAGAA+GGG 0.646152 2.2:+58100698 None:intergenic
CAACTAGATCAGTAGTACTG+AGG 0.672059 2.2:+58097610 None:intergenic
GACAGCTCTATGCTGCGTAG+TGG 0.672635 2.2:-58100738 MS.gene02080:CDS
ACGAGACTAGCAAGCATACG+AGG 0.681087 2.2:+58100593 None:intergenic
TCGTTGGGTCAAAATTGGCG+AGG 0.685429 2.2:+58097335 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCGTTAATAAAATAAAAAA+TGG - chr2.2:58098744-58098763 MS.gene02080:intron 10.0%
!! ATTTACTAGTAATAAAATAA+AGG + chr2.2:58099701-58099720 None:intergenic 10.0%
!! TCTAATAACAATTTATTTAT+GGG - chr2.2:58099496-58099515 MS.gene02080:intron 10.0%
!! TTCTAATAACAATTTATTTA+TGG - chr2.2:58099495-58099514 MS.gene02080:intron 10.0%
!! TTTACTAGTAATAAAATAAA+GGG + chr2.2:58099700-58099719 None:intergenic 10.0%
!!! ATGAGTATTTTTTTTTTTTT+TGG - chr2.2:58098716-58098735 MS.gene02080:intron 10.0%
!!! TTGTAGAATTTTTTTAAAAA+CGG + chr2.2:58097725-58097744 None:intergenic 10.0%
!! AAGTTATTAAAGTTACAATT+TGG - chr2.2:58099032-58099051 MS.gene02080:intron 15.0%
!! AATATTATTAATTAGCAGTT+AGG + chr2.2:58097700-58097719 None:intergenic 15.0%
!! ATTAGAACTTCAAAATAATA+TGG + chr2.2:58099482-58099501 None:intergenic 15.0%
!!! AAAAAATGGATATTTTTAGA+AGG - chr2.2:58098758-58098777 MS.gene02080:intron 15.0%
!!! GCAATTTTTTCTAATTAAAA+GGG - chr2.2:58100211-58100230 MS.gene02080:intron 15.0%
!!! GTATATAACAACAAATTTTA+AGG - chr2.2:58100255-58100274 MS.gene02080:intron 15.0%
!!! TGCAATTTTTTCTAATTAAA+AGG - chr2.2:58100210-58100229 MS.gene02080:intron 15.0%
!!! TTATGTGTAGTTTTTTTTAT+TGG - chr2.2:58098535-58098554 MS.gene02080:intron 15.0%
!!! TTTTAAACTATATTCACAAA+AGG - chr2.2:58097763-58097782 MS.gene02080:intron 15.0%
!! AAATAAGTTGTATTAAGAGT+TGG + chr2.2:58100385-58100404 None:intergenic 20.0%
!! AAATGACATCTAATACTATT+TGG - chr2.2:58098512-58098531 MS.gene02080:intron 20.0%
!! AAGTTATTAACGATACAATT+TGG + chr2.2:58099329-58099348 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2.2:58099092-58099111 MS.gene02080:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2.2:58099111-58099092 None:intergenic 20.0%
!! AATATATATGCTTCAAATGT+AGG - chr2.2:58100280-58100299 MS.gene02080:intron 20.0%
!! AATTCAAAATCAATTGAACT+AGG - chr2.2:58100709-58100728 MS.gene02080:CDS 20.0%
!! ATAACCAACAAATAACTTAA+GGG - chr2.2:58099362-58099381 MS.gene02080:intron 20.0%
!! ATATTAATATTACGCATACA+CGG - chr2.2:58098003-58098022 MS.gene02080:CDS 20.0%
!! ATATTATCTATGATTGTAAC+AGG - chr2.2:58099741-58099760 MS.gene02080:intron 20.0%
!! ATGATTAAAATGGGTAATAT+TGG - chr2.2:58100637-58100656 MS.gene02080:CDS 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2.2:58099270-58099289 MS.gene02080:intron 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2.2:58099289-58099270 None:intergenic 20.0%
!! ATTGTATCGTTAATAACTTA+TGG - chr2.2:58099330-58099349 MS.gene02080:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr2.2:58099211-58099230 MS.gene02080:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr2.2:58099230-58099211 None:intergenic 20.0%
!! GAAACCAAAAATTAAGTTAA+GGG - chr2.2:58099242-58099261 MS.gene02080:intron 20.0%
!! TAAGCAAAAATTTCTACATT+TGG + chr2.2:58099560-58099579 None:intergenic 20.0%
!! TATAACCAACAAATAACTTA+AGG - chr2.2:58099361-58099380 MS.gene02080:intron 20.0%
!! TATTATCTATGATTGTAACA+GGG - chr2.2:58099742-58099761 MS.gene02080:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2.2:58099271-58099290 MS.gene02080:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2.2:58099290-58099271 None:intergenic 20.0%
!! TTGTATCGTTAATAACTTAT+GGG - chr2.2:58099331-58099350 MS.gene02080:intron 20.0%
!! TTTAGGCTTAATTAATGATT+TGG - chr2.2:58098973-58098992 MS.gene02080:intron 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG - chr2.2:58098352-58098371 MS.gene02080:intron 20.0%
!!! AGAATTTTTCAAGAAATAGT+TGG - chr2.2:58098338-58098357 MS.gene02080:intron 20.0%
!!! CTTATTTGTTGGTTATATTT+TGG - chr2.2:58099003-58099022 MS.gene02080:intron 20.0%
!!! GTTATTTGTTGGTTATATTT+TGG + chr2.2:58099358-58099377 None:intergenic 20.0%
!!! TAGTTGTTATTAATCATGTT+AGG + chr2.2:58099970-58099989 None:intergenic 20.0%
!!! TATTTTACTTTAGATCTGTT+TGG - chr2.2:58098563-58098582 MS.gene02080:intron 20.0%
!!! TTTTGTCTGAGTTTAAATTT+AGG + chr2.2:58097660-58097679 None:intergenic 20.0%
! CAAAATAGTAATTAAGCCTA+TGG - chr2.2:58099387-58099406 MS.gene02080:intron 25.0%
! CCTTAACTCTAATAACATAA+AGG + chr2.2:58099182-58099201 None:intergenic 25.0%
! CCTTTATGTTATTAGAGTTA+AGG - chr2.2:58099179-58099198 MS.gene02080:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr2.2:58099210-58099229 MS.gene02080:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr2.2:58099229-58099210 None:intergenic 25.0%
! CGAAACCAAAAATTAAGTTA+AGG - chr2.2:58099241-58099260 MS.gene02080:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr2.2:58099302-58099321 MS.gene02080:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr2.2:58099321-58099302 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG + chr2.2:58100478-58100497 None:intergenic 25.0%
! TATAACCAACAAATAAGCTA+AGG + chr2.2:58099000-58099019 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr2.2:58099301-58099320 MS.gene02080:intron 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr2.2:58099320-58099301 None:intergenic 25.0%
! TTATTAATCATGTTAGGATG+AGG + chr2.2:58099964-58099983 None:intergenic 25.0%
!! GTTCATGTTAATATTTCTGT+TGG - chr2.2:58097457-58097476 MS.gene02080:CDS 25.0%
!! TAATACATGTATGTATTGAC+AGG - chr2.2:58100019-58100038 MS.gene02080:intron 25.0%
!! TTAGCTCAAATCAATCTTTT+AGG + chr2.2:58097617-58097636 None:intergenic 25.0%
!!! AAAAGATTGATTTGAGCTAA+AGG - chr2.2:58097617-58097636 MS.gene02080:CDS 25.0%
!!! CTTAATTTTTGGTTTCGTTT+TGG + chr2.2:58099238-58099257 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr2.2:58099123-58099142 MS.gene02080:intron 25.0%
!!! GTCACTTTAGATTTTACTTT+TGG + chr2.2:58098846-58098865 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr2.2:58099298-58099317 None:intergenic 25.0%
AAGTAAGACACAAAAGACAT+GGG + chr2.2:58097275-58097294 None:intergenic 30.0%
AGTATCTATGAGTAAACCAT+AGG + chr2.2:58099406-58099425 None:intergenic 30.0%
ATTCACAAAAGGCAAATGTT+TGG - chr2.2:58097774-58097793 MS.gene02080:intron 30.0%
CTACATTAACTGCATCAATT+TGG + chr2.2:58097927-58097946 None:intergenic 30.0%
TAAACCATATTTACCCCTTT+AGG + chr2.2:58098957-58098976 None:intergenic 30.0%
TAAAGGGGTAAATATGGTTT+AGG - chr2.2:58098956-58098975 MS.gene02080:intron 30.0%
TAAGTAAGACACAAAAGACA+TGG + chr2.2:58097276-58097295 None:intergenic 30.0%
TGAGTGTAAAAGTCAAAAAG+TGG + chr2.2:58098913-58098932 None:intergenic 30.0%
TGATCCCTTAAGTTATTTGT+TGG + chr2.2:58099369-58099388 None:intergenic 30.0%
TGCACAAATTTCCTCAATAT+TGG - chr2.2:58099933-58099952 MS.gene02080:intron 30.0%
! AATTTGAACGGTTTTACGAA+AGG - chr2.2:58098284-58098303 MS.gene02080:intron 30.0%
! GTTATTTGTTGGTTACATCT+TGG - chr2.2:58099063-58099082 MS.gene02080:intron 30.0%
! TGGTCCCTTAACTTAATTTT+TGG + chr2.2:58099249-58099268 None:intergenic 30.0%
!! ATTACCCATTTTAATCATCG+CGG + chr2.2:58100635-58100654 None:intergenic 30.0%
!! CTCTTAGAGAGTTGATATTT+GGG + chr2.2:58099828-58099847 None:intergenic 30.0%
!! GATGGGCAATTTAATTTGAA+CGG - chr2.2:58098272-58098291 MS.gene02080:intron 30.0%
!! TGAAACTTTCAAAGCATTGA+AGG + chr2.2:58099592-58099611 None:intergenic 30.0%
!!! CTTGGTTTTGAAAAAGTGAT+GGG - chr2.2:58098255-58098274 MS.gene02080:intron 30.0%
!!! TAAGATTTCCTTTTGCTGTT+TGG - chr2.2:58098232-58098251 MS.gene02080:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr2.2:58099112-58099131 MS.gene02080:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr2.2:58099131-58099112 None:intergenic 30.0%
!!! TTTCCACTGCTGTTTTAATT+CGG + chr2.2:58099867-58099886 None:intergenic 30.0%
AAACCGAATTAAAACAGCAG+TGG - chr2.2:58099861-58099880 MS.gene02080:intron 35.0%
AAATGGGAGAGTTACCTAAA+GGG - chr2.2:58098940-58098959 MS.gene02080:intron 35.0%
AACTACTACTCCAATCTTCA+GGG - chr2.2:58100493-58100512 MS.gene02080:intron 35.0%
AATAACATAAAGGACCAGAG+TGG + chr2.2:58099172-58099191 None:intergenic 35.0%
AATGTAGGTGCACATACATT+CGG - chr2.2:58100295-58100314 MS.gene02080:intron 35.0%
ACTTGCGAATCAAAATCTTC+CGG - chr2.2:58100103-58100122 MS.gene02080:intron 35.0%
AGTTGATCCAACGAATTGAA+TGG + chr2.2:58100131-58100150 None:intergenic 35.0%
CAAATTTATCAGGAGTCGTT+GGG + chr2.2:58100468-58100487 None:intergenic 35.0%
CAGATGTTGAGAAAAGTTCT+TGG + chr2.2:58100543-58100562 None:intergenic 35.0%
CCAAATATCAACTCTCTAAG+AGG - chr2.2:58099826-58099845 MS.gene02080:intron 35.0%
CCATTATTCGTGAAGTCATA+AGG - chr2.2:58097151-58097170 MS.gene02080:CDS 35.0%
CCTTATGACTTCACGAATAA+TGG + chr2.2:58097154-58097173 None:intergenic 35.0%
CTGTTGGATATATACTCATG+TGG - chr2.2:58097473-58097492 MS.gene02080:CDS 35.0%
GACATGGGAATGAATGAATA+TGG + chr2.2:58097260-58097279 None:intergenic 35.0%
GATATTAACGTGTCAGTGTT+AGG - chr2.2:58097422-58097441 MS.gene02080:CDS 35.0%
GTTACCTAAAGGGGTAAATA+TGG - chr2.2:58098950-58098969 MS.gene02080:intron 35.0%
GTTGTATTAAGAGTTGGATC+AGG + chr2.2:58100379-58100398 None:intergenic 35.0%
TCAAAATTGGCGAGGTTATT+TGG + chr2.2:58100445-58100464 None:intergenic 35.0%
TCAAATTTATCAGGAGTCGT+TGG + chr2.2:58100469-58100488 None:intergenic 35.0%
TCCAATCTTCAGGGTAAAAA+GGG - chr2.2:58100502-58100521 MS.gene02080:intron 35.0%
TGAGGAAATTTGTGCAGAAA+GGG + chr2.2:58099929-58099948 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2.2:58099052-58099071 MS.gene02080:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2.2:58099071-58099052 None:intergenic 35.0%
TTACGCAAAATATGCCCTAA+TGG - chr2.2:58100412-58100431 MS.gene02080:intron 35.0%
TTATACAACTTCAGCAGTAC+AGG - chr2.2:58100349-58100368 MS.gene02080:intron 35.0%
TTGAGGAAATTTGTGCAGAA+AGG + chr2.2:58099930-58099949 None:intergenic 35.0%
TTGGTCCTTAGCTTATTTGT+TGG - chr2.2:58098992-58099011 MS.gene02080:intron 35.0%
TTGGTGTACATTCCATGTTA+GGG - chr2.2:58097793-58097812 MS.gene02080:intron 35.0%
! AATAAAAACCGTACGCGTTT+TGG - chr2.2:58097868-58097887 MS.gene02080:CDS 35.0%
! ATGAGGCATTACCAATATTG+AGG + chr2.2:58099947-58099966 None:intergenic 35.0%
! CAAGAACTTTTCTCAACATC+TGG - chr2.2:58100541-58100560 MS.gene02080:intron 35.0%
! CGAATAATGGAATGAACCTT+TGG + chr2.2:58097141-58097160 None:intergenic 35.0%
! TATCAACTCTCTAAGAGGTT+TGG - chr2.2:58099831-58099850 MS.gene02080:intron 35.0%
! TTTGGTGTACATTCCATGTT+AGG - chr2.2:58097792-58097811 MS.gene02080:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - chr2.2:58099519-58099538 MS.gene02080:intron 35.0%
!! CCTCTTAGAGAGTTGATATT+TGG + chr2.2:58099829-58099848 None:intergenic 35.0%
!! CTTTCATGACTGTTTTGTTC+TGG - chr2.2:58097224-58097243 MS.gene02080:CDS 35.0%
!! GAACTTGTTGACAATGCTAA+TGG + chr2.2:58100575-58100594 None:intergenic 35.0%
!!! GATTTTGATTCGCAAGTGAT+TGG + chr2.2:58100100-58100119 None:intergenic 35.0%
!!! GCTTGGTTTTGAAAAAGTGA+TGG - chr2.2:58098254-58098273 MS.gene02080:intron 35.0%
!!! TCTAATCTCTCCTTTTTTCC+CGG + chr2.2:58100671-58100690 None:intergenic 35.0%
AAACCAAGCCAAACAGCAAA+AGG + chr2.2:58098243-58098262 None:intergenic 40.0%
AAACCATCCCTTCTTCCTAA+GGG + chr2.2:58100068-58100087 None:intergenic 40.0%
AAATTGGCGAGGTTATTTGG+TGG + chr2.2:58100442-58100461 None:intergenic 40.0%
AACTTGATCCTTCCTTCTAC+AGG - chr2.2:58097106-58097125 MS.gene02080:CDS 40.0%
AATGGGAGAGTTACCTAAAG+GGG - chr2.2:58098941-58098960 MS.gene02080:intron 40.0%
ACTTGATCCTTCCTTCTACA+GGG - chr2.2:58097107-58097126 MS.gene02080:CDS 40.0%
AGCATCTTGTTCACTCACAA+TGG + chr2.2:58099803-58099822 None:intergenic 40.0%
AGGTAACTCTCCCATTTCAA+CGG + chr2.2:58098937-58098956 None:intergenic 40.0%
CAACTAGATCAGTAGTACTG+AGG + chr2.2:58100178-58100197 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr2.2:58098414-58098433 None:intergenic 40.0%
CTCCAATCTTCAGGGTAAAA+AGG - chr2.2:58100501-58100520 MS.gene02080:intron 40.0%
CTCCTTAACTTATGCCCTAA+GGG - chr2.2:58099659-58099678 MS.gene02080:intron 40.0%
GAAATGGGAGAGTTACCTAA+AGG - chr2.2:58098939-58098958 MS.gene02080:intron 40.0%
GAACTACTACTCCAATCTTC+AGG - chr2.2:58100492-58100511 MS.gene02080:intron 40.0%
GAAGCCGCGATGATTAAAAT+GGG - chr2.2:58100628-58100647 MS.gene02080:CDS 40.0%
GCACTATTTGCCACAATTCA+AGG + chr2.2:58098417-58098436 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr2.2:58098425-58098444 MS.gene02080:intron 40.0%
TAAACCATCCCTTCTTCCTA+AGG + chr2.2:58100069-58100088 None:intergenic 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.2:58099898-58099917 None:intergenic 40.0%
TGAACTAGGTCTAGTGAATG+TGG - chr2.2:58100723-58100742 MS.gene02080:CDS 40.0%
TGAAGCCGCGATGATTAAAA+TGG - chr2.2:58100627-58100646 MS.gene02080:CDS 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr2.2:58098391-58098410 None:intergenic 40.0%
TTACACTCAGCCGTTGAAAT+GGG - chr2.2:58098924-58098943 MS.gene02080:intron 40.0%
TTCCTTAACTTATGCCCCAA+GGG + chr2.2:58099537-58099556 None:intergenic 40.0%
TTCGTCACGTATCTTGTGTT+TGG + chr2.2:58098808-58098827 None:intergenic 40.0%
TTTACACTCAGCCGTTGAAA+TGG - chr2.2:58098923-58098942 MS.gene02080:intron 40.0%
! AAATCTGCATTTGCTGCTCA+AGG - chr2.2:58100152-58100171 MS.gene02080:intron 40.0%
! ACCCTTTTTACCCTGAAGAT+TGG + chr2.2:58100506-58100525 None:intergenic 40.0%
! TGTATGTATTGACAGGCAGA+TGG - chr2.2:58100026-58100045 MS.gene02080:intron 40.0%
! TTGATTCGCAAGTGATTGGT+TGG + chr2.2:58100096-58100115 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG - chr2.2:58099520-58099539 MS.gene02080:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr2.2:58099676-58099695 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr2.2:58099518-58099537 MS.gene02080:intron 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr2.2:58099677-58099696 None:intergenic 40.0%
!!! TTTCCTTTTGCTGTTTGGCT+TGG - chr2.2:58098237-58098256 MS.gene02080:intron 40.0%
AAACCGAACCAAAACGCGTA+CGG + chr2.2:58097879-58097898 None:intergenic 45.0%
AACCATACCCGATGAATCTG+TGG + chr2.2:58100752-58100771 None:intergenic 45.0%
AAGTTGTGCATCTGAGGAGA+AGG + chr2.2:58097091-58097110 None:intergenic 45.0%
ACTCATAGATACTGCTGCAG+TGG - chr2.2:58099413-58099432 MS.gene02080:intron 45.0%
ACTGATCTAGTTGCTCTCTC+AGG - chr2.2:58100185-58100204 MS.gene02080:intron 45.0%
AGGAGTCGTTGGGTCAAAAT+TGG + chr2.2:58100458-58100477 None:intergenic 45.0%
AGTTGTGCATCTGAGGAGAA+GGG + chr2.2:58097090-58097109 None:intergenic 45.0%
CCTAAGGGAACCTTCCAATT+AGG + chr2.2:58100053-58100072 None:intergenic 45.0%
CCTAATTGGAAGGTTCCCTT+AGG - chr2.2:58100050-58100069 MS.gene02080:intron 45.0%
CGCAAAATATGCCCTAATGG+CGG - chr2.2:58100415-58100434 MS.gene02080:intron 45.0%
GAAGGTTCCCTTAGGAAGAA+GGG - chr2.2:58100058-58100077 MS.gene02080:intron 45.0%
GCTCCTTAACTTATGCCCTA+AGG - chr2.2:58099658-58099677 MS.gene02080:intron 45.0%
GTTCCTTAACTTATGCCCCA+AGG + chr2.2:58099538-58099557 None:intergenic 45.0%
TAAAGGACCAGAGTGGTTGA+CGG + chr2.2:58099165-58099184 None:intergenic 45.0%
TAACGTGTCAGTGTTAGGTC+TGG - chr2.2:58097427-58097446 MS.gene02080:CDS 45.0%
TAAGCTGCAGTACTGCATGA+TGG - chr2.2:58098885-58098904 MS.gene02080:intron 45.0%
TCCAACGAATTGAATGGAGC+CGG + chr2.2:58100125-58100144 None:intergenic 45.0%
TGCCCTTAGGGCATAAGTTA+AGG + chr2.2:58099664-58099683 None:intergenic 45.0%
TGTGGCTTCCACAGATTCAT+CGG - chr2.2:58100741-58100760 MS.gene02080:CDS 45.0%
TTCCACAGATTCATCGGGTA+TGG - chr2.2:58100747-58100766 MS.gene02080:CDS 45.0%
TTCCATGTTAGGGTTGTTCG+TGG - chr2.2:58097803-58097822 MS.gene02080:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr2.2:58098397-58098416 None:intergenic 45.0%
! AGGATCAAGTTGTGCATCTG+AGG + chr2.2:58097097-58097116 None:intergenic 45.0%
! ATTCGCAAGTGATTGGTTGG+CGG + chr2.2:58100093-58100112 None:intergenic 45.0%
! GGTAATATTGGTGTGCTGAC+CGG - chr2.2:58100649-58100668 MS.gene02080:CDS 45.0%
! GTAATATTGGTGTGCTGACC+GGG - chr2.2:58100650-58100669 MS.gene02080:CDS 45.0%
! TATTTGGTGGTCCGCCATTA+GGG + chr2.2:58100429-58100448 None:intergenic 45.0%
! TTATTTGGTGGTCCGCCATT+AGG + chr2.2:58100430-58100449 None:intergenic 45.0%
!!! AAACCGTACGCGTTTTGGTT+CGG - chr2.2:58097873-58097892 MS.gene02080:CDS 45.0%
!!! TTATTTTATTTTTTTTTGAA+AGG - chr2.2:58097508-58097527 MS.gene02080:intron 5.0%
ACGAGACTAGCAAGCATACG+AGG + chr2.2:58097195-58097214 None:intergenic 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr2.2:58098404-58098423 MS.gene02080:intron 50.0%
AGCTGTCAACGTGAGACCAA+AGG + chr2.2:58097034-58097053 None:intergenic 50.0%
CAAGTGTCCCTGTAGAAGGA+AGG + chr2.2:58097117-58097136 None:intergenic 50.0%
CTACAGGGACACTTGTCCAA+AGG - chr2.2:58097122-58097141 MS.gene02080:CDS 50.0%
CTCCACGAACAACCCTAACA+TGG + chr2.2:58097808-58097827 None:intergenic 50.0%
GACAGGCAGATGGTCCTAAT+TGG - chr2.2:58100036-58100055 MS.gene02080:intron 50.0%
GCGTAGTGGTTGTTCTTGGA+GGG - chr2.2:58097061-58097080 MS.gene02080:CDS 50.0%
GGAAGGTTCCCTTAGGAAGA+AGG - chr2.2:58100057-58100076 MS.gene02080:intron 50.0%
GGCAGATGGTCCTAATTGGA+AGG - chr2.2:58100040-58100059 MS.gene02080:intron 50.0%
GGTTGACGGAGGAAGAGTTA+AGG + chr2.2:58099151-58099170 None:intergenic 50.0%
GTGGCTTCCACAGATTCATC+GGG - chr2.2:58100742-58100761 MS.gene02080:CDS 50.0%
GTTCCCTTAGGAAGAAGGGA+TGG - chr2.2:58100062-58100081 MS.gene02080:intron 50.0%
TCCGGCTCCATTCAATTCGT+TGG - chr2.2:58100121-58100140 MS.gene02080:intron 50.0%
TCGTTGGGTCAAAATTGGCG+AGG + chr2.2:58100453-58100472 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr2.2:58098409-58098428 None:intergenic 50.0%
TGCCCTTGGGGCATAAGTTA+AGG - chr2.2:58099532-58099551 MS.gene02080:intron 50.0%
TGCGTAGTGGTTGTTCTTGG+AGG - chr2.2:58097060-58097079 MS.gene02080:CDS 50.0%
TGCTGCGTAGTGGTTGTTCT+TGG - chr2.2:58097057-58097076 MS.gene02080:CDS 50.0%
TGGACAAGTGTCCCTGTAGA+AGG + chr2.2:58097121-58097140 None:intergenic 50.0%
!!! GTACGCGTTTTGGTTCGGTT+TGG - chr2.2:58097878-58097897 MS.gene02080:CDS 50.0%
GACAGCTCTATGCTGCGTAG+TGG - chr2.2:58097047-58097066 MS.gene02080:CDS 55.0%
GGGTTGTTCGTGGAGCAGTT+TGG - chr2.2:58097813-58097832 MS.gene02080:intron 55.0%
TCTTCCTCCGTCAACCACTC+TGG - chr2.2:58099155-58099174 MS.gene02080:intron 55.0%
! GGTGTGCTGACCGGGAAAAA+AGG - chr2.2:58100658-58100677 MS.gene02080:CDS 55.0%
AGGACCAGAGTGGTTGACGG+AGG + chr2.2:58099162-58099181 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58097024 58100783 58097024 ID=MS.gene02080
chr2.2 mRNA 58097024 58100783 58097024 ID=MS.gene02080.t1;Parent=MS.gene02080
chr2.2 exon 58100562 58100783 58100562 ID=MS.gene02080.t1.exon1;Parent=MS.gene02080.t1
chr2.2 CDS 58100562 58100783 58100562 ID=cds.MS.gene02080.t1;Parent=MS.gene02080.t1
chr2.2 exon 58097853 58098044 58097853 ID=MS.gene02080.t1.exon2;Parent=MS.gene02080.t1
chr2.2 CDS 58097853 58098044 58097853 ID=cds.MS.gene02080.t1;Parent=MS.gene02080.t1
chr2.2 exon 58097601 58097766 58097601 ID=MS.gene02080.t1.exon3;Parent=MS.gene02080.t1
chr2.2 CDS 58097601 58097766 58097601 ID=cds.MS.gene02080.t1;Parent=MS.gene02080.t1
chr2.2 exon 58097024 58097505 58097024 ID=MS.gene02080.t1.exon4;Parent=MS.gene02080.t1
chr2.2 CDS 58097024 58097505 58097024 ID=cds.MS.gene02080.t1;Parent=MS.gene02080.t1
Gene Sequence

>MS.gene02080

ATGAACTCCTTTGGTCTCACGTTGACAGCTCTATGCTGCGTAGTGGTTGTTCTTGGAGGGTTACCCTTCTCCTCAGATGCACAACTTGATCCTTCCTTCTACAGGGACACTTGTCCAAAGGTTCATTCCATTATTCGTGAAGTCATAAGGAACGTCTCTAAAACAGATCCTCGTATGCTTGCTAGTCTCGTCAGACTTCACTTTCATGACTGTTTTGTTCTGGTATATACTCTCCATATTCATTCATTCCCATGTCTTTTGTGTCTTACTTATACTCATGTTCATGTATATATCACTAGCACTGACATTTCAAACTAAACATGTTTGATATTTGTCGCTAGCTAACACGACATTTATACATATAATTACTGTTAATTTAAGTTTCTCAAATTATTACTGATATTAACGTGTCAGTGTTAGGTCTGGTGTTGATGTTCATGTTAATATTTCTGTTGGATATATACTCATGTGGAATCATTCATAGTTATTTTATTTTTTTTTGAAAGGAAATCATTCATAGTTCTTTACTTGAATTGCTTCTATTTGATATATCTAAAATATTGTTACTTTTATACTGAATTTAACTTAATCCTAAAAGATTGATTTGAGCTAAAGGTTATAAGAGTAAGAGTTCCTAAATTTAAACTCAGACAAAAGAGAAAAAATATATTAACCTAACTGCTAATTAATAATATTTTCCGTTTTTAAAAAAATTCTACAAACTCAGTTTGAAACTCATTTTTAAACTATATTCACAAAAGGCAAATGTTTGGTGTACATTCCATGTTAGGGTTGTTCGTGGAGCAGTTTGGATCACTTTTGAAGTAAAAAAAACGTGATTCAAAATAAAAACCGTACGCGTTTTGGTTCGGTTTGGATGATCATTTTAAAAAATTCGATCCAAATTGATGCAGTTAATGTAGACTTATTTAGATTGATTTTTTGACATACAAAATATAATTGTAAATTTTTTTTATTGATATTAATATTACGCATACACGGTAAAATAATAAGTTTGATGTAAAATATAACGTAAAATATATTAAAATTGAACATTATAGAATGAAAACAATCGATTATGTTTGAAACATATGAAGTTGTAAAAATATAGATTAAATTAAACTAATAAGTATTATTTAAAGAATTTAAAAACAACAAGTAATAGATTAATGTAATATATCATACTAATAAAAAAAATAAACAAGTATTAAGATTTCCTTTTGCTGTTTGGCTTGGTTTTGAAAAAGTGATGGGCAATTTAATTTGAACGGTTTTACGAAAGGAAAATGCTACTTCTCAAGAAAAATAGCTTCAAGAATTTTTCAAGAAATAGTTGGCAAATTTTAATTGGATGATTTATTTGTCCACTTCCTATTTTTCAGCCACACCTCCTTGAATTGTGGCAAATAGTGCATTGTGATTGGCTATTCTTTATTCTTGAAGAATTCTTGATGTTATTTTTCTAGAGATATAGCATTGCTCTTTACGAAATGACATCTAATACTATTTGGTTATGTGTAGTTTTTTTTATTGGTTTACTATTTTACTTTAGATCTGTTTGGATTTGAACACATCTAACTCATATATGAGTGCATATATCTTGAGAGAGAAAGAAATTGAGAGCTTAATGTAAATGATGTAATATAATAATGTGACAGAAACAGATGAATAGAGATAAAATGAATCATTAAAATGAGTATTTTTTTTTTTTTTGGTAGAAATCGTTAATAAAATAAAAAATGGATATTTTTAGAAGGTAAAATATATCAAGAAACGTTAAACCAAACACAAGATACGTGACGAATAGAACAACAGTGATCCAAAAGTAAAATCTAAAGTGACACTTGCACTTCACACAAAATAAGCTGCAGTACTGCATGATGGATCCACTTTTTGACTTTTACACTCAGCCGTTGAAATGGGAGAGTTACCTAAAGGGGTAAATATGGTTTAGGCTTAATTAATGATTTGGTCCTTAGCTTATTTGTTGGTTATATTTTGGTCATATAAGTTATTAAAGTTACAATTTGGTCCCTTAAGTTATTTGTTGGTTACATCTTGGTCCCATAAGTTATTAACGTTACAATTTGGTCCCTTAACTTATTTTTTGGTTTCGTTTTGGTACCTTAACTCTTCCTCCGTCAACCACTCTGGTCCTTTATGTTATTAGAGTTAAGGTACAAAAACGAAACCAAAAAATAAGTTAAGGGACCAAAACGAAACCAAAAATTAAGTTAAGGGACCAAATTGTAACGTTAATAACTTATGGGACCAAAATGTAACCAACAAATAACTTAAGGGACCAAATTGTATCGTTAATAACTTATGGGACCAAAATATAACCAACAAATAACTTAAGGGATCAAAATAGTAATTAAGCCTATGGTTTACTCATAGATACTGCTGCAGTGGATACATGTCAATGTCAATATATGACATCATTTAAGTTTCTTTTCCATATTATTTTGAAGTTCTAATAACAATTTATTTATGGGAAATGTTAACTTGTGCCCTTGGGGCATAAGTTAAGGAACCAAATGTAGAAATTTTTGCTTAAAAGTTGTACCTTCAATGCTTTGAAAGTTTCAAAAGTTATCATTTAAATATAAAATTTATTTGTTAATTCTATTTTAAGCTCCTTAACTTATGCCCTAAGGGCACAAGTTAACATGACCCTTTATTTTATTACTAGTAAATAAAATTTTAATATTTGTATTATATTATCTATGATTGTAACAGGGTTGTGATGCATCAGTTTTACTGAACAAAACTGATACCATTGTGAGTGAACAAGATGCTTTCCCAAATATCAACTCTCTAAGAGGTTTGGATGTTGTAAACCGAATTAAAACAGCAGTGGAAAATGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCCCTTTCTGCACAAATTTCCTCAATATTGGTAATGCCTCATCCTAACATGATTAATAACAACTATACTAATTATTAGTGATGATTAATTAAATTAATACATGTATGTATTGACAGGCAGATGGTCCTAATTGGAAGGTTCCCTTAGGAAGAAGGGATGGTTTAACCGCCAACCAATCACTTGCGAATCAAAATCTTCCGGCTCCATTCAATTCGTTGGATCAACTTAAATCTGCATTTGCTGCTCAAGGCCTCAGTACTACTGATCTAGTTGCTCTCTCAGGTATGCAATTTTTTCTAATTAAAAGGGCTCGAATCACTTCGTTATCACGTATATAACAACAAATTTTAAGGCTAATATATATGCTTCAAATGTAGGTGCACATACATTCGGAAGAGCACGTTGCACTTTCATCACTGATCGATTATACAACTTCAGCAGTACAGGAAAACCTGATCCAACTCTTAATACAACTTATTTACAAGAATTACGCAAAATATGCCCTAATGGCGGACCACCAAATAACCTCGCCAATTTTGACCCAACGACTCCTGATAAATTTGACAAGAACTACTACTCCAATCTTCAGGGTAAAAAGGGTTTGCTTCAGAGTGACCAAGAACTTTTCTCAACATCTGGTGCTGATACCATTAGCATTGTCAACAAGTTCAGTGCTGACAAAAATGCTTTCTTCGATAGCTTTGAAGCCGCGATGATTAAAATGGGTAATATTGGTGTGCTGACCGGGAAAAAAGGAGAGATTAGAAAACATTGCAATTTTGTTAATTCAAAATCAATTGAACTAGGTCTAGTGAATGTGGCTTCCACAGATTCATCGGGTATGGTTAGCTCAATTTAA
Protein sequence

>MS.gene02080.t1

MNSFGLTLTALCCVVVVLGGLPFSSDAQLDPSFYRDTCPKVHSIIREVIRNVSKTDPRMLASLVRLHFHDCFVLGCDASVLLNKTDTIVSEQDAFPNINSLRGLDVVNRIKTAVENACPNTVSCADILALSAQISSILADGPNWKVPLGRRDGLTANQSLANQNLPAPFNSLDQLKSAFAAQGLSTTDLVALSGAHTFGRARCTFITDRLYNFSSTGKPDPTLNTTYLQELRKICPNGGPPNNLANFDPTTPDKFDKNYYSNLQGKKGLLQSDQELFSTSGADTISIVNKFSADKNAFFDSFEAAMIKMGNIGVLTGKKGEIRKHCNFVNSKSIELGLVNVASTDSSGMVSSI