AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74559

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74559.t1 MTR_2g029820 96.901 355 11 0 1 355 1 355 0.0 712
MS.gene74559.t1 MTR_2g029815 88.451 355 38 1 1 355 1 352 0.0 647
MS.gene74559.t1 MTR_2g029800 83.380 355 57 1 1 355 1 353 0.0 612
MS.gene74559.t1 MTR_2g029830 82.583 333 57 1 22 353 21 353 0.0 570
MS.gene74559.t1 MTR_2g028980 70.986 355 103 0 1 355 1 355 0.0 529
MS.gene74559.t1 MTR_2g029850 73.239 355 90 3 1 354 1 351 0.0 527
MS.gene74559.t1 MTR_2g029740 71.549 355 101 0 1 355 1 355 0.0 524
MS.gene74559.t1 MTR_2g029750 69.859 355 106 1 1 355 1 354 0.0 511
MS.gene74559.t1 MTR_2g029860 71.989 357 94 5 1 355 1 353 0.0 511
MS.gene74559.t1 MTR_2g029910 67.514 354 110 2 3 355 4 353 2.92e-176 493
MS.gene74559.t1 MTR_2g029830 83.986 281 44 1 74 353 5 285 3.07e-175 488
MS.gene74559.t1 MTR_2g029560 63.380 355 119 2 1 355 1 344 4.30e-164 462
MS.gene74559.t1 MTR_2g029730 64.045 356 116 3 1 355 1 345 2.99e-163 460
MS.gene74559.t1 MTR_7g093370 60.586 307 120 1 25 330 65 371 8.70e-134 386
MS.gene74559.t1 MTR_1g054205 59.164 311 126 1 21 330 16 326 3.96e-133 383
MS.gene74559.t1 MTR_5g021060 52.805 303 142 1 29 331 30 331 1.21e-109 323
MS.gene74559.t1 MTR_8g076820 50.495 303 149 1 29 331 30 331 1.39e-107 318
MS.gene74559.t1 MTR_4g125940 50.938 320 153 2 14 331 13 330 8.96e-107 316
MS.gene74559.t1 MTR_2g040000 49.837 307 149 2 28 331 28 332 3.56e-104 310
MS.gene74559.t1 MTR_5g017860 51.148 305 145 3 27 330 25 326 5.94e-104 309
MS.gene74559.t1 MTR_5g017850 49.673 306 148 4 27 330 25 326 2.96e-101 302
MS.gene74559.t1 MTR_1g022970 49.007 302 154 0 29 330 46 347 8.12e-99 296
MS.gene74559.t1 MTR_4g125940 53.986 276 123 2 58 331 2 275 2.47e-96 287
MS.gene74559.t1 MTR_3g094650 47.222 324 156 4 5 326 8 318 8.22e-96 288
MS.gene74559.t1 MTR_2g084080 45.231 325 169 2 6 330 2 317 1.03e-95 287
MS.gene74559.t1 MTR_4g029200 48.387 310 151 2 21 330 38 338 1.86e-95 287
MS.gene74559.t1 MTR_3g094670 47.256 328 158 4 1 326 4 318 2.93e-94 284
MS.gene74559.t1 MTR_2g084000 48.852 305 148 2 26 330 23 319 4.53e-94 283
MS.gene74559.t1 MTR_3g466200 46.769 325 157 5 9 330 9 320 1.86e-93 282
MS.gene74559.t1 MTR_4g046713 44.892 323 170 4 9 330 11 326 2.74e-93 281
MS.gene74559.t1 MTR_4g029170 47.950 317 154 4 16 330 14 321 3.16e-93 281
MS.gene74559.t1 MTR_7g072510 44.753 324 162 3 7 330 6 312 3.18e-93 281
MS.gene74559.t1 MTR_5g074970 47.112 329 159 5 7 330 8 326 1.19e-92 280
MS.gene74559.t1 MTR_4g083710 47.649 319 157 3 15 330 13 324 1.19e-92 280
MS.gene74559.t1 MTR_2g088770 45.768 319 167 5 15 331 12 326 1.43e-92 280
MS.gene74559.t1 MTR_5g083860 45.062 324 166 4 9 330 12 325 3.67e-92 278
MS.gene74559.t1 MTR_3g072190 47.525 303 150 2 28 330 25 318 8.98e-92 277
MS.gene74559.t1 MTR_2g084020 45.541 314 163 2 17 330 13 318 1.37e-91 277
MS.gene74559.t1 MTR_2g084090 46.835 316 156 5 17 330 13 318 1.58e-91 277
MS.gene74559.t1 MTR_3g094630 46.988 332 161 4 1 330 4 322 1.72e-91 277
MS.gene74559.t1 MTR_2g084110 45.223 314 163 2 17 330 13 317 3.61e-91 276
MS.gene74559.t1 MTR_2g084010 45.860 314 162 2 17 330 13 318 6.69e-91 275
MS.gene74559.t1 MTR_4g029190 49.351 308 144 5 26 330 42 340 1.30e-90 275
MS.gene74559.t1 MTR_4g029180 47.841 301 146 4 32 330 30 321 6.05e-90 273
MS.gene74559.t1 MTR_4g122640 45.875 303 159 3 29 330 38 336 3.14e-89 271
MS.gene74559.t1 MTR_7g072480 46.349 315 160 2 16 330 11 316 6.81e-88 267
MS.gene74559.t1 MTR_5g014100 46.865 303 157 2 32 330 29 331 8.98e-88 268
MS.gene74559.t1 MTR_7g107520 44.062 320 173 4 11 330 7 320 2.52e-87 266
MS.gene74559.t1 MTR_4g074995 45.768 319 150 4 15 330 10 308 3.56e-87 265
MS.gene74559.t1 MTR_3g466180 45.397 315 163 2 16 330 18 323 5.61e-87 265
MS.gene74559.t1 MTR_4g114210 44.099 322 165 7 15 330 8 320 8.40e-87 265
MS.gene74559.t1 MTR_5g074740 44.308 325 170 4 9 330 5 321 1.31e-86 264
MS.gene74559.t1 MTR_5g049280 43.987 316 166 6 23 331 27 338 1.64e-86 265
MS.gene74559.t1 MTR_5g074760 44.828 319 165 4 15 330 11 321 2.17e-86 264
MS.gene74559.t1 MTR_5g074710 44.923 325 168 4 9 330 5 321 4.54e-86 263
MS.gene74559.t1 MTR_1g115900 42.368 321 174 4 13 331 11 322 8.18e-86 263
MS.gene74559.t1 MTR_2g029880 60.185 216 72 3 139 354 7 208 2.43e-85 257
MS.gene74559.t1 MTR_5g074860 43.976 332 175 4 1 329 1 324 3.44e-85 261
MS.gene74559.t1 MTR_3g092990 42.633 319 180 2 14 331 11 327 9.40e-85 259
MS.gene74559.t1 MTR_4g031140 41.987 312 176 3 25 336 24 330 9.47e-85 260
MS.gene74559.t1 MTR_2g008710 45.033 302 155 5 33 330 31 325 3.20e-84 258
MS.gene74559.t1 MTR_4g030890 43.087 311 172 3 24 334 95 400 9.28e-84 260
MS.gene74559.t1 MTR_4g133800 45.302 298 152 6 34 330 46 333 2.91e-83 256
MS.gene74559.t1 MTR_6g043240 47.541 305 142 8 29 330 42 331 4.44e-82 254
MS.gene74559.t1 MTR_3g467600 44.688 320 167 3 14 330 12 324 7.13e-82 252
MS.gene74559.t1 MTR_7g086820 42.157 306 168 5 27 332 18 314 3.36e-81 250
MS.gene74559.t1 MTR_6g043280 43.902 328 160 7 16 332 20 334 4.98e-80 248
MS.gene74559.t1 MTR_4g074990 42.320 319 155 4 15 330 13 305 1.64e-79 246
MS.gene74559.t1 MTR_5g016010 41.441 333 186 5 1 329 1 328 1.97e-79 246
MS.gene74559.t1 MTR_1g009750 45.277 307 160 5 28 330 26 328 1.13e-78 244
MS.gene74559.t1 MTR_4g087965 43.607 305 165 5 28 327 41 343 4.16e-78 243
MS.gene74559.t1 MTR_7g026990 40.803 299 167 3 33 331 35 323 1.35e-77 241
MS.gene74559.t1 MTR_6g043460 43.408 311 163 6 29 337 36 335 2.57e-77 241
MS.gene74559.t1 MTR_5g022870 40.184 326 183 8 6 330 2 316 2.85e-77 240
MS.gene74559.t1 MTR_2g437770 43.522 301 158 6 32 331 53 342 2.99e-77 241
MS.gene74559.t1 MTR_1g101830 42.484 306 170 4 25 330 23 322 3.00e-77 240
MS.gene74559.t1 MTR_1g038680 43.046 302 166 4 33 330 33 332 3.42e-77 241
MS.gene74559.t1 MTR_1g086490 40.299 335 187 4 7 330 8 340 9.84e-77 239
MS.gene74559.t1 MTR_1g086320 39.697 330 189 4 7 330 8 333 2.24e-76 238
MS.gene74559.t1 MTR_4g127670 45.215 303 156 5 28 326 23 319 5.03e-76 237
MS.gene74559.t1 MTR_8g075100 40.717 307 174 5 24 330 21 319 2.74e-75 235
MS.gene74559.t1 MTR_4g132490 40.000 325 187 5 9 330 8 327 1.21e-74 234
MS.gene74559.t1 MTR_4g095450 42.508 327 174 6 5 326 3 320 3.59e-74 233
MS.gene74559.t1 MTR_3g072190 46.718 259 129 2 72 330 2 251 4.34e-74 230
MS.gene74559.t1 MTR_6g027440 39.815 324 178 8 11 330 4 314 1.60e-72 228
MS.gene74559.t1 MTR_3g092990 40.125 319 177 3 14 331 11 316 6.01e-72 226
MS.gene74559.t1 MTR_4g074980 40.190 316 155 5 15 330 13 294 8.43e-72 225
MS.gene74559.t1 MTR_1g090760 40.549 328 185 6 9 330 7 330 1.84e-71 226
MS.gene74559.t1 MTR_7g029030 40.181 331 186 5 1 330 1 320 2.29e-71 225
MS.gene74559.t1 MTR_1g025980 39.198 324 189 5 6 329 2 317 3.02e-71 225
MS.gene74559.t1 MTR_1g077000 38.323 334 189 7 1 330 7 327 3.50e-71 225
MS.gene74559.t1 MTR_2g099175 39.228 311 171 6 28 330 35 335 9.82e-70 221
MS.gene74559.t1 MTR_0155s0040 37.003 327 187 6 4 330 8 315 2.15e-69 220
MS.gene74559.t1 MTR_7g086870 39.935 308 167 7 27 331 20 312 1.68e-68 218
MS.gene74559.t1 MTR_1g009750 42.020 307 153 6 28 330 26 311 1.98e-68 217
MS.gene74559.t1 MTR_2g008160 40.193 311 174 6 25 330 20 323 2.27e-68 218
MS.gene74559.t1 MTR_4g074980 44.177 249 128 3 15 260 13 253 4.19e-68 214
MS.gene74559.t1 MTR_5g074860 38.554 332 154 4 1 329 1 285 5.05e-65 207
MS.gene74559.t1 MTR_8g062780 37.580 314 188 4 25 334 19 328 1.47e-64 208
MS.gene74559.t1 MTR_5g033470 38.462 312 179 7 27 330 71 377 1.47e-63 207
MS.gene74559.t1 MTR_2g008730 37.888 322 164 6 14 330 11 301 1.15e-62 202
MS.gene74559.t1 MTR_2g067440 35.068 365 189 8 3 331 36 388 2.53e-62 204
MS.gene74559.t1 MTR_3g105790 39.355 310 178 4 24 330 20 322 2.77e-62 202
MS.gene74559.t1 MTR_0286s0010 39.228 311 178 7 25 330 30 334 5.01e-62 201
MS.gene74559.t1 MTR_6g008075 39.228 311 178 7 25 330 30 334 5.01e-62 201
MS.gene74559.t1 MTR_2g078610 35.511 352 186 8 14 327 55 403 6.95e-62 203
MS.gene74559.t1 MTR_2g077990 35.613 351 185 8 14 326 55 402 1.81e-61 202
MS.gene74559.t1 MTR_1g066710 38.511 309 177 5 27 331 25 324 3.87e-61 199
MS.gene74559.t1 MTR_1g066380 37.338 308 182 4 27 331 25 324 1.18e-58 192
MS.gene74559.t1 MTR_1g066640 37.987 308 180 4 27 331 25 324 1.77e-58 192
MS.gene74559.t1 MTR_4g132110 37.013 308 181 5 32 335 35 333 1.94e-58 192
MS.gene74559.t1 MTR_0147s0010 34.877 324 175 4 26 329 74 381 4.24e-58 193
MS.gene74559.t1 MTR_4g132110 36.741 313 180 6 32 335 35 338 3.85e-57 189
MS.gene74559.t1 MTR_2g078280 35.191 341 180 8 14 316 55 392 1.04e-56 189
MS.gene74559.t1 MTR_1g066680 37.419 310 178 6 27 331 25 323 3.32e-56 186
MS.gene74559.t1 MTR_2g067450 37.459 307 182 6 27 329 9 309 1.69e-55 184
MS.gene74559.t1 MTR_2g008160 35.048 311 155 6 25 330 20 288 2.98e-51 172
MS.gene74559.t1 MTR_1g066380 38.550 262 150 4 73 331 3 256 6.75e-48 162
MS.gene74559.t1 MTR_2g008160 43.820 178 96 3 25 202 20 193 1.72e-44 152
MS.gene74559.t1 MTR_3g072210 45.026 191 96 3 141 330 56 238 3.80e-44 152
MS.gene74559.t1 MTR_3g105790 39.916 238 137 3 96 330 12 246 8.71e-44 152
MS.gene74559.t1 MTR_5g074700 39.224 232 116 5 102 330 5 214 2.34e-42 147
MS.gene74559.t1 MTR_7g072490 36.948 249 94 3 75 323 2 187 2.51e-39 139
MS.gene74559.t1 MTR_3g072260 55.238 105 47 0 28 132 25 129 2.22e-34 124
MS.gene74559.t1 MTR_5g058120 43.558 163 79 3 164 326 6 155 1.44e-32 122
MS.gene74559.t1 MTR_2g029930 58.407 113 19 3 14 112 4 102 2.63e-32 117
MS.gene74559.t1 MTR_2g077980 32.857 280 145 10 91 331 11 286 5.18e-30 116
MS.gene74559.t1 MTR_2g078560 32.018 228 122 5 135 331 96 321 5.38e-28 112
MS.gene74559.t1 MTR_3g462850 40.411 146 76 6 193 331 9 150 9.07e-24 95.9
MS.gene74559.t1 MTR_7g086790 32.292 192 108 4 76 267 17 186 5.52e-22 92.4
MS.gene74559.t1 MTR_1g089005 40.000 125 68 2 15 133 1 124 4.01e-21 89.0
MS.gene74559.t1 MTR_1g098320 48.193 83 41 1 251 333 47 127 9.96e-18 79.3
MS.gene74559.t1 MTR_4g114220 47.059 85 35 2 49 133 23 97 1.81e-17 78.6
MS.gene74559.t1 MTR_6g048160 54.930 71 28 2 68 138 22 88 2.48e-17 76.6
MS.gene74559.t1 MTR_4g012865 45.070 71 39 0 26 96 74 144 4.56e-17 77.8
MS.gene74559.t1 MTR_5g074770 42.529 87 49 1 243 329 23 108 8.51e-16 72.8
MS.gene74559.t1 MTR_7g107500 41.414 99 54 3 232 330 3 97 1.03e-13 66.6
MS.gene74559.t1 MTR_7g086810 31.405 121 57 1 27 147 4 98 1.07e-13 70.1
MS.gene74559.t1 MTR_3g107060 26.471 272 152 8 44 314 91 315 2.73e-13 70.1
MS.gene74559.t1 MTR_4g031040 28.571 175 81 3 88 262 1 131 4.54e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74559.t1 AT5G06730 55.723 332 145 1 14 343 18 349 1.21e-132 383
MS.gene74559.t1 AT5G06720 56.467 317 138 0 14 330 17 333 1.23e-131 379
MS.gene74559.t1 AT2G38380 54.955 333 140 3 24 355 26 349 3.13e-127 369
MS.gene74559.t1 AT2G38390 53.453 333 145 3 24 355 26 349 9.61e-126 365
MS.gene74559.t1 AT3G49120 54.277 339 150 3 14 347 14 352 2.75e-124 362
MS.gene74559.t1 AT3G32980 55.692 325 142 2 25 347 27 351 1.22e-123 360
MS.gene74559.t1 AT3G49110 55.077 325 144 2 25 347 29 353 7.86e-121 353
MS.gene74559.t1 AT4G08770 54.688 320 143 2 25 342 20 339 1.59e-120 352
MS.gene74559.t1 AT4G08780 53.125 320 148 2 25 342 20 339 8.33e-117 342
MS.gene74559.t1 AT5G19880 52.751 309 143 2 25 330 21 329 1.19e-112 331
MS.gene74559.t1 AT2G18140 51.656 302 145 1 29 330 35 335 5.86e-108 319
MS.gene74559.t1 AT2G18150 51.316 304 147 1 27 330 34 336 8.13e-108 319
MS.gene74559.t1 AT4G36430 51.623 308 148 1 24 331 25 331 7.64e-107 316
MS.gene74559.t1 AT5G66390 49.675 308 154 1 23 330 27 333 3.51e-106 315
MS.gene74559.t1 AT5G19890 51.792 307 140 4 27 331 28 328 3.13e-104 310
MS.gene74559.t1 AT3G50990 49.837 307 153 1 24 330 36 341 1.91e-102 305
MS.gene74559.t1 AT1G44970 49.351 308 154 1 23 330 41 346 1.59e-100 301
MS.gene74559.t1 AT1G14550 48.366 306 150 3 26 330 23 321 2.09e-97 292
MS.gene74559.t1 AT5G05340 46.815 314 156 3 19 330 20 324 4.53e-96 288
MS.gene74559.t1 AT4G16270 47.855 303 153 4 29 330 50 348 7.03e-94 284
MS.gene74559.t1 AT1G14540 46.584 322 165 3 9 330 1 315 1.35e-93 282
MS.gene74559.t1 AT1G49570 45.902 305 160 3 27 328 46 348 2.52e-92 280
MS.gene74559.t1 AT1G68850 46.382 304 157 5 33 331 34 336 3.64e-91 276
MS.gene74559.t1 AT1G05260 42.216 334 182 7 1 331 1 326 9.33e-87 265
MS.gene74559.t1 AT2G41480 44.037 327 169 6 9 330 11 328 5.27e-86 263
MS.gene74559.t1 AT4G11290 41.846 325 184 4 8 330 5 326 3.37e-85 261
MS.gene74559.t1 AT1G71695 46.104 308 154 6 29 333 44 342 5.38e-85 261
MS.gene74559.t1 AT5G58390 45.570 316 160 5 14 326 6 312 1.41e-84 259
MS.gene74559.t1 AT2G35380 47.351 302 155 3 33 330 34 335 1.55e-84 259
MS.gene74559.t1 AT5G58400 44.343 327 167 5 3 326 7 321 1.59e-84 259
MS.gene74559.t1 AT3G03670 43.092 304 170 2 27 330 21 321 4.67e-84 258
MS.gene74559.t1 AT2G22420 42.025 326 177 4 15 340 16 329 1.93e-83 256
MS.gene74559.t1 AT2G18980 45.652 322 162 6 15 330 9 323 1.16e-82 254
MS.gene74559.t1 AT5G15180 42.581 310 167 6 25 330 27 329 4.81e-82 253
MS.gene74559.t1 AT3G21770 42.342 333 186 5 1 331 1 329 1.06e-81 252
MS.gene74559.t1 AT5G14130 43.711 318 170 5 18 330 17 330 2.14e-81 251
MS.gene74559.t1 AT5G64120 43.960 298 159 5 33 330 39 328 2.50e-81 251
MS.gene74559.t1 AT4G30170 44.984 309 159 5 26 330 24 325 2.65e-81 251
MS.gene74559.t1 AT3G01190 42.105 323 178 7 9 330 7 321 2.97e-81 251
MS.gene74559.t1 AT5G14130 43.711 318 170 5 18 330 58 371 5.49e-81 251
MS.gene74559.t1 AT1G05240 44.156 308 158 5 29 330 26 325 1.48e-80 249
MS.gene74559.t1 AT1G05250 44.156 308 158 5 29 330 26 325 1.48e-80 249
MS.gene74559.t1 AT5G67400 42.331 326 181 4 9 330 7 329 2.45e-79 246
MS.gene74559.t1 AT5G51890 43.322 307 167 5 25 330 22 322 2.73e-79 246
MS.gene74559.t1 AT5G17820 41.447 304 166 5 27 330 22 313 5.03e-79 244
MS.gene74559.t1 AT4G37530 43.366 309 170 3 25 330 23 329 5.33e-79 245
MS.gene74559.t1 AT5G17820 41.447 304 166 5 27 330 75 366 8.40e-78 243
MS.gene74559.t1 AT4G25980 41.284 327 177 6 9 330 10 326 2.36e-77 241
MS.gene74559.t1 AT5G39580 41.265 332 177 8 1 330 4 319 7.04e-77 239
MS.gene74559.t1 AT3G49960 42.025 326 179 5 9 330 10 329 9.75e-77 239
MS.gene74559.t1 AT4G37520 41.042 307 176 3 27 330 25 329 6.08e-74 232
MS.gene74559.t1 AT5G64110 44.371 302 155 7 33 330 38 330 9.86e-74 232
MS.gene74559.t1 AT4G37520 40.717 307 174 4 27 330 25 326 2.30e-72 228
MS.gene74559.t1 AT5G64100 42.193 301 161 7 33 330 41 331 2.85e-72 228
MS.gene74559.t1 AT2G39040 42.444 311 168 7 27 330 44 350 6.02e-72 228
MS.gene74559.t1 AT4G33420 38.226 327 188 7 4 330 13 325 8.27e-71 224
MS.gene74559.t1 AT4G33420 38.226 327 188 7 4 330 60 372 3.37e-70 224
MS.gene74559.t1 AT5G42180 39.628 323 185 7 8 329 3 316 4.75e-70 222
MS.gene74559.t1 AT2G34060 39.935 308 176 6 26 327 39 343 6.97e-69 220
MS.gene74559.t1 AT2G24800 40.909 308 171 5 27 330 29 329 1.39e-68 218
MS.gene74559.t1 AT5G24070 38.757 338 186 8 4 331 10 336 6.12e-68 217
MS.gene74559.t1 AT4G37530 44.747 257 139 2 25 278 23 279 9.73e-68 214
MS.gene74559.t1 AT4G33870 35.629 334 169 6 33 327 72 398 1.98e-67 218
MS.gene74559.t1 AT1G77100 39.514 329 183 7 7 330 2 319 3.52e-67 214
MS.gene74559.t1 AT4G31760 38.387 310 183 3 23 330 23 326 5.64e-67 214
MS.gene74559.t1 AT4G17690 39.216 306 175 5 29 331 26 323 5.58e-66 211
MS.gene74559.t1 AT5G40150 39.423 312 180 4 21 330 24 328 2.12e-65 210
MS.gene74559.t1 AT5G47000 37.730 326 192 6 9 331 14 331 3.19e-65 210
MS.gene74559.t1 AT1G24110 38.037 326 193 6 8 330 3 322 5.00e-65 209
MS.gene74559.t1 AT2G43480 38.608 316 173 8 25 330 31 335 1.22e-64 208
MS.gene74559.t1 AT4G26010 40.193 311 164 8 24 330 17 309 1.39e-64 207
MS.gene74559.t1 AT4G26010 40.193 311 164 8 24 330 45 337 1.93e-64 208
MS.gene74559.t1 AT3G28200 37.540 309 183 4 24 330 16 316 6.59e-63 203
MS.gene74559.t1 AT1G30870 38.816 304 173 6 33 333 55 348 2.42e-62 203
MS.gene74559.t1 AT5G22410 37.338 308 173 8 27 326 26 321 5.43e-62 201
MS.gene74559.t1 AT2G35380 45.344 247 131 3 88 330 1 247 1.89e-60 195
MS.gene74559.t1 AT4G21960 37.829 304 176 5 32 331 34 328 2.82e-60 197
MS.gene74559.t1 AT1G34510 39.414 307 168 8 27 331 20 310 3.59e-60 196
MS.gene74559.t1 AT3G17070 37.838 333 188 10 7 330 17 339 4.08e-58 192
MS.gene74559.t1 AT2G37130 36.570 309 184 5 26 330 27 327 9.55e-56 185
MS.gene74559.t1 AT2G37130 36.634 303 180 5 32 330 2 296 2.56e-54 181
MS.gene74559.t1 AT4G25980 41.202 233 124 5 9 236 55 279 8.67e-50 168
MS.gene74559.t1 AT5G39580 42.157 204 104 5 1 203 4 194 4.52e-41 144
MS.gene74559.t1 AT3G17070 37.546 269 149 10 71 330 18 276 5.46e-41 145
MS.gene74559.t1 AT2G24800 42.442 172 95 1 27 198 29 196 4.18e-37 134
MS.gene74559.t1 AT1G77490 28.137 263 151 9 63 314 106 341 2.41e-15 77.0
MS.gene74559.t1 AT1G77490 28.137 263 151 9 63 314 106 341 2.58e-15 77.0
MS.gene74559.t1 AT3G09640 25.352 213 117 5 103 313 74 246 4.60e-13 68.9
MS.gene74559.t1 AT3G09640 25.352 213 117 5 103 313 74 246 4.60e-13 68.9
MS.gene74559.t1 AT3G42570 31.507 146 87 4 53 196 15 149 2.81e-11 61.6

Find 64 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACAAGTGTTCCTGTAAA+AGG 0.264524 2.3:+59838900 None:intergenic
TAGGGCTGCTATGATCAAAA+TGG 0.283772 2.3:-59836494 MS.gene74559:CDS
GGAAATATTGGTGTGTTAAC+CGG 0.297989 2.3:-59836472 MS.gene74559:CDS
AGGAGTTGTTGGATCGAAAT+TGG 0.299793 2.3:+59836666 None:intergenic
TCTAATCTCTCCTTGGTTCC+CGG 0.308228 2.3:+59836453 None:intergenic
CCTCTTAATGAGTTTCTGTT+TGG 0.310696 2.3:+59837342 None:intergenic
ATTTCAGGTGCTCATACATT+TGG 0.340486 2.3:-59836826 MS.gene74559:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2.3:+59836646 None:intergenic
CAGAAACTCATTAAGAGGTT+TGG 0.342785 2.3:-59837337 MS.gene74559:CDS
CGAACAATGGAACTAACATT+TGG 0.350033 2.3:+59838880 None:intergenic
CCAAACAGAAACTCATTAAG+AGG 0.372095 2.3:-59837342 MS.gene74559:CDS
CCTGACTGGAAGGTTCCTTT+AGG 0.381585 2.3:-59837095 MS.gene74559:CDS
CAAGAGTTGTTCTCAACATC+TGG 0.390230 2.3:-59836580 MS.gene74559:CDS
ATGATCAAAATGGGAAATAT+TGG 0.401401 2.3:-59836484 MS.gene74559:CDS
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2.3:-59838961 MS.gene74559:CDS
CCATTGTTCGTGAAGTCATA+AGG 0.434806 2.3:-59838867 MS.gene74559:CDS
GAATTTGTTGACAATGCTAA+TGG 0.449121 2.3:+59836549 None:intergenic
GTATGCTTGCTAGTCTTGTC+AGG 0.452656 2.3:-59838822 MS.gene74559:CDS
AAACCATCTCTTCTTCCTAA+AGG 0.452959 2.3:+59837080 None:intergenic
TTGTACAACTTCAGCGGTAC+GGG 0.454738 2.3:-59836772 MS.gene74559:CDS
TCAAATTTATCAGGAGTTGT+TGG 0.456888 2.3:+59836655 None:intergenic
AATCAAAACAGCTGTGGAAA+AGG 0.458727 2.3:-59837301 MS.gene74559:CDS
AGGTCTCGATACTACTGATC+TGG 0.469058 2.3:-59836973 MS.gene74559:CDS
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2.3:+59837273 None:intergenic
AATTCAAAATCAGCAGAACT+TGG 0.476123 2.3:-59836412 MS.gene74559:CDS
AAGTAAGTTGTGTTAAGAGT+TGG 0.480928 2.3:+59836739 None:intergenic
ACTGATCTGGTTGCACTCTC+CGG 0.486593 2.3:-59836960 MS.gene74559:intron
AATAGGCAGATGGTCCTGAC+TGG 0.492532 2.3:-59837109 MS.gene74559:intron
AGATTCATCTGAGGAGGGTA+TGG 0.494872 2.3:-59836368 MS.gene74559:CDS
CCTAAAGGAACCTTCCAGTC+AGG 0.502692 2.3:+59837095 None:intergenic
AGGGCTGCTATGATCAAAAT+GGG 0.502945 2.3:-59836493 MS.gene74559:CDS
TTCGTGCCAGGTCCACCATT+GGG 0.506163 2.3:+59836694 None:intergenic
TCAGTAGTATTGAAAGGAGC+TGG 0.514353 2.3:+59837023 None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG 0.517053 2.3:+59836744 None:intergenic
GAAATATTGGTGTGTTAACC+GGG 0.517789 2.3:-59836471 MS.gene74559:CDS
CCTTATGACTTCACGAACAA+TGG 0.525359 2.3:+59838867 None:intergenic
TTGTTGGATCGAAATTGGTA+AGG 0.530982 2.3:+59836671 None:intergenic
ATATGTCCCAATGGTGGACC+TGG 0.533119 2.3:-59836700 MS.gene74559:CDS
TACCGCTGAAGTTGTACAAT+CGG 0.535831 2.3:+59836776 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.538902 2.3:+59838930 None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG 0.546841 2.3:+59836693 None:intergenic
AGTTCATCAGTAGTATTGAA+AGG 0.552774 2.3:+59837017 None:intergenic
AAAGCTGCATTTGCTGCTCA+AGG 0.555072 2.3:-59836993 MS.gene74559:CDS
GTTGTGTTAAGAGTTGGATC+GGG 0.555195 2.3:+59836745 None:intergenic
AATAGCTTTGTGCTGTGTAG+TGG 0.557732 2.3:-59838971 MS.gene74559:CDS
GGCAGATGGTCCTGACTGGA+AGG 0.562824 2.3:-59837105 MS.gene74559:CDS
ATTGTACAACTTCAGCGGTA+CGG 0.567546 2.3:-59836773 MS.gene74559:CDS
CTCAGCAGATTCATCTGAGG+AGG 0.567597 2.3:-59836374 MS.gene74559:CDS
AGTTGTGCATTTGAAGAGAA+GGG 0.569161 2.3:+59838931 None:intergenic
CAAGTGTTCCTGTAAAAGGA+TGG 0.579502 2.3:+59838904 None:intergenic
GTTCCTTTAGGAAGAAGAGA+TGG 0.584332 2.3:-59837083 MS.gene74559:CDS
AAATTGGTAAGGTTCGTGCC+AGG 0.584556 2.3:+59836682 None:intergenic
CGCACAATATGTCCCAATGG+TGG 0.600150 2.3:-59836706 MS.gene74559:CDS
TGCTGAATTATCATCTACAC+TGG 0.600987 2.3:-59837235 MS.gene74559:intron
GAATCAAATCAAAACAGCTG+TGG 0.608984 2.3:-59837307 MS.gene74559:CDS
GATGAAATAAAATAGGCAGA+TGG 0.618837 2.3:-59837119 MS.gene74559:intron
AGCCGATTGTACAACTTCAG+CGG 0.631715 2.3:-59836778 MS.gene74559:CDS
AGCATCTTGTTCACTCACAA+CGG 0.632766 2.3:+59837368 None:intergenic
CTCCTCAGATGAATCTGCTG+AGG 0.635056 2.3:+59836375 None:intergenic
TTGCGCACAATATGTCCCAA+TGG 0.640051 2.3:-59836709 MS.gene74559:CDS
GGTGTGTTAACCGGGAACCA+AGG 0.643371 2.3:-59836463 MS.gene74559:CDS
TCAGCAGATTCATCTGAGGA+GGG 0.667386 2.3:-59836373 MS.gene74559:CDS
ACAAGACTAGCAAGCATACG+AGG 0.681087 2.3:+59838826 None:intergenic
TGCCTCAGCAGATTCATCTG+AGG 0.692262 2.3:-59836377 MS.gene74559:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAAAAATAAAATT+TGG + chr2.3:59837250-59837269 None:intergenic 0.0%
!!! TTAATATTTTTTACTATTAG+TGG + chr2.3:59836821-59836840 None:intergenic 10.0%
!!! TTTTATTTTAATTAAACAGA+AGG + chr2.3:59837074-59837093 None:intergenic 10.0%
!! AAAATATATAGTATAGTTTG+AGG + chr2.3:59838149-59838168 None:intergenic 15.0%
!! AATTGAATTTGAAAATTCAA+TGG + chr2.3:59838181-59838200 None:intergenic 15.0%
!! TTTGTTTCAAAAATTCTAAT+TGG - chr2.3:59838431-59838450 MS.gene74559:intron 15.0%
!! AAAATGCATAAAAATATGCA+AGG - chr2.3:59836951-59836970 MS.gene74559:intron 20.0%
!! ACTTAAAAAATGTTACATAC+CGG + chr2.3:59838410-59838429 None:intergenic 20.0%
!! ATCTGTTATATAAAGTTATC+CGG - chr2.3:59837841-59837860 MS.gene74559:intron 20.0%
!! ATCTTTCAAAAAAGAAAGAT+TGG + chr2.3:59837792-59837811 None:intergenic 20.0%
!! ATGTACTAATTCTACTTAAA+TGG + chr2.3:59836710-59836729 None:intergenic 20.0%
!! TCATACTACTATAAGATTAT+AGG + chr2.3:59836682-59836701 None:intergenic 20.0%
!! TGCTTAATATTTATAGCTTA+AGG - chr2.3:59837107-59837126 MS.gene74559:CDS 20.0%
!! TGTACTAATTCTACTTAAAT+GGG + chr2.3:59836709-59836728 None:intergenic 20.0%
!! TTACTAAGTATGCAATAATT+TGG + chr2.3:59837722-59837741 None:intergenic 20.0%
!!! ATGTGAAAAATAGCTTTTTT+TGG + chr2.3:59837002-59837021 None:intergenic 20.0%
!!! ATTTAACTTACTTAATAACC+CGG - chr2.3:59836877-59836896 MS.gene74559:intron 20.0%
!!! CTATTTTTCACATATTTTGA+GGG - chr2.3:59837009-59837028 MS.gene74559:CDS 20.0%
!!! GATTTTTATTAGCAAGTAAT+TGG + chr2.3:59838303-59838322 None:intergenic 20.0%
!!! GTTTTGTGATGAAATAAAAT+AGG - chr2.3:59838222-59838241 MS.gene74559:intron 20.0%
!!! TAACAGATTTTAAAACCTTT+TGG + chr2.3:59837829-59837848 None:intergenic 20.0%
!!! TTAAGTTGTTCACATTTAAT+TGG - chr2.3:59837330-59837349 MS.gene74559:CDS 20.0%
! AAAAATCTCTCTTGGTAAAA+AGG + chr2.3:59837154-59837173 None:intergenic 25.0%
! ACAACTTAAAATAAAGTGGA+CGG + chr2.3:59837319-59837338 None:intergenic 25.0%
! ATGATCAAAATGGGAAATAT+TGG - chr2.3:59838864-59838883 MS.gene74559:CDS 25.0%
! GATATAAATTCTTGACTTCT+TGG - chr2.3:59836652-59836671 MS.gene74559:CDS 25.0%
! GTGAACAACTTAAAATAAAG+TGG + chr2.3:59837323-59837342 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG + chr2.3:59838705-59838724 None:intergenic 25.0%
! TATATATGTTTCTCGATTTC+AGG - chr2.3:59838507-59838526 MS.gene74559:intron 25.0%
! TCTAATCTTCAAGTGAAAAA+AGG - chr2.3:59838729-59838748 MS.gene74559:intron 25.0%
! TGAATGAATATGCAAAAACT+AGG + chr2.3:59836591-59836610 None:intergenic 25.0%
! TTGAAAGATAAAGTTATCCA+TGG - chr2.3:59837803-59837822 MS.gene74559:intron 25.0%
!! CTCAAAAAAAGCTTTTTGAT+CGG + chr2.3:59838829-59838848 None:intergenic 25.0%
!!! AAAATAGCTTTTTTTGGTAG+TGG + chr2.3:59836996-59837015 None:intergenic 25.0%
!!! GCTATTTTTCACATATTTTG+AGG - chr2.3:59837008-59837027 MS.gene74559:CDS 25.0%
!!! TTTTTTTAACCAAGTTGCTT+GGG + chr2.3:59837619-59837638 None:intergenic 25.0%
!!! TTTTTTTTAACCAAGTTGCT+TGG + chr2.3:59837620-59837639 None:intergenic 25.0%
AAGTAAGTTGTGTTAAGAGT+TGG + chr2.3:59838612-59838631 None:intergenic 30.0%
AATTCAAAATCAGCAGAACT+TGG - chr2.3:59838936-59838955 MS.gene74559:CDS 30.0%
ACTAGTAGTATTTCACGATA+TGG - chr2.3:59837220-59837239 MS.gene74559:intron 30.0%
ATTGGTATATCCGTATAAGA+CGG - chr2.3:59837348-59837367 MS.gene74559:CDS 30.0%
CTATTAGTGGTAGAATGTAT+AGG + chr2.3:59836808-59836827 None:intergenic 30.0%
GATGAAATAAAATAGGCAGA+TGG - chr2.3:59838229-59838248 MS.gene74559:intron 30.0%
TACTGACATGTTACATTCAA+TGG + chr2.3:59837398-59837417 None:intergenic 30.0%
TCAAATTTATCAGGAGTTGT+TGG + chr2.3:59838696-59838715 None:intergenic 30.0%
TCATTTAGAAGCAATAGAGT+TGG - chr2.3:59837179-59837198 MS.gene74559:intron 30.0%
TGAGTCAAAAAAATCTCTCT+TGG + chr2.3:59837162-59837181 None:intergenic 30.0%
TGTTATATAAAGTTATCCGG+CGG - chr2.3:59837844-59837863 MS.gene74559:intron 30.0%
! AGTTCATCAGTAGTATTGAA+AGG + chr2.3:59838334-59838353 None:intergenic 30.0%
! ATTGTTTTCTAATCTCTCCT+TGG + chr2.3:59838905-59838924 None:intergenic 30.0%
!! AAAAATAGCTTTGATTCAGC+CGG + chr2.3:59836899-59836918 None:intergenic 30.0%
!! GAATTTGTTGACAATGCTAA+TGG + chr2.3:59838802-59838821 None:intergenic 30.0%
!! TCATTTTTCCAACTCAAGTT+TGG + chr2.3:59836858-59836877 None:intergenic 30.0%
!!! AAGCTTTTTTTGAGAGCTTT+AGG - chr2.3:59838835-59838854 MS.gene74559:CDS 30.0%
!!! AGCTTTTTTTGAGAGCTTTA+GGG - chr2.3:59838836-59838855 MS.gene74559:CDS 30.0%
!!! ATTTTAAAACCTTTTGGCCA+TGG + chr2.3:59837823-59837842 None:intergenic 30.0%
AAACCATCTCTTCTTCCTAA+AGG + chr2.3:59838271-59838290 None:intergenic 35.0%
AAGTTGTGCATTTGAAGAGA+AGG + chr2.3:59836421-59836440 None:intergenic 35.0%
AATCAAAACAGCTGTGGAAA+AGG - chr2.3:59838047-59838066 MS.gene74559:intron 35.0%
ACTTAAAATAAAGTGGACGG+TGG + chr2.3:59837316-59837335 None:intergenic 35.0%
AGTTGTGCATTTGAAGAGAA+GGG + chr2.3:59836420-59836439 None:intergenic 35.0%
AGTTGTGTTAAGAGTTGGAT+CGG + chr2.3:59838607-59838626 None:intergenic 35.0%
CAGAAACTCATTAAGAGGTT+TGG - chr2.3:59838011-59838030 MS.gene74559:intron 35.0%
CATAAAAATATGCAAGGTCC+GGG - chr2.3:59836957-59836976 MS.gene74559:intron 35.0%
CCAAACAGAAACTCATTAAG+AGG - chr2.3:59838006-59838025 MS.gene74559:intron 35.0%
CCTCTTAATGAGTTTCTGTT+TGG + chr2.3:59838009-59838028 None:intergenic 35.0%
CGAACAATGGAACTAACATT+TGG + chr2.3:59836471-59836490 None:intergenic 35.0%
CTTAAAATAAAGTGGACGGT+GGG + chr2.3:59837315-59837334 None:intergenic 35.0%
GAAATATTGGTGTGTTAACC+GGG - chr2.3:59838877-59838896 MS.gene74559:CDS 35.0%
GAATCAAATCAAAACAGCTG+TGG - chr2.3:59838041-59838060 MS.gene74559:intron 35.0%
GCATAAAAATATGCAAGGTC+CGG - chr2.3:59836956-59836975 MS.gene74559:intron 35.0%
GGAAATATTGGTGTGTTAAC+CGG - chr2.3:59838876-59838895 MS.gene74559:CDS 35.0%
TAAAGTTATCCATGGCCAAA+AGG - chr2.3:59837811-59837830 MS.gene74559:intron 35.0%
TATACCTACCAAACTTGAGT+TGG - chr2.3:59836847-59836866 MS.gene74559:intron 35.0%
TGCTGAATTATCATCTACAC+TGG - chr2.3:59838113-59838132 MS.gene74559:intron 35.0%
TTGTTGGATCGAAATTGGTA+AGG + chr2.3:59838680-59838699 None:intergenic 35.0%
! AACTTGATCCATCCTTTTAC+AGG - chr2.3:59836436-59836455 MS.gene74559:CDS 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.3:59838522-59838541 MS.gene74559:intron 35.0%
! TTTTCCAACTCAAGTTTGGT+AGG + chr2.3:59836854-59836873 None:intergenic 35.0%
!! AAAATAGCTTTGATTCAGCC+GGG + chr2.3:59836898-59836917 None:intergenic 35.0%
!!! TTTTTTTCTTCCTTTCGCAC+CGG - chr2.3:59837471-59837490 MS.gene74559:intron 35.0%
AAAACTCAGTATCCGATCCA+AGG - chr2.3:59837266-59837285 MS.gene74559:CDS 40.0%
ACACGTACAATGAGCAAAAC+AGG + chr2.3:59836630-59836649 None:intergenic 40.0%
AGCATCTTGTTCACTCACAA+CGG + chr2.3:59837983-59838002 None:intergenic 40.0%
AGGAGTTGTTGGATCGAAAT+TGG + chr2.3:59838685-59838704 None:intergenic 40.0%
AGGGCTGCTATGATCAAAAT+GGG - chr2.3:59838855-59838874 MS.gene74559:CDS 40.0%
ATGTGATCCATGATTGCAAC+AGG - chr2.3:59837921-59837940 MS.gene74559:intron 40.0%
ATTGTACAACTTCAGCGGTA+CGG - chr2.3:59838575-59838594 MS.gene74559:intron 40.0%
CAAGAGTTGTTCTCAACATC+TGG - chr2.3:59838768-59838787 MS.gene74559:intron 40.0%
CAAGTGTTCCTGTAAAAGGA+TGG + chr2.3:59836447-59836466 None:intergenic 40.0%
CACGTACAATGAGCAAAACA+GGG + chr2.3:59836629-59836648 None:intergenic 40.0%
CCATTGTTCGTGAAGTCATA+AGG - chr2.3:59836481-59836500 MS.gene74559:CDS 40.0%
CCTTATGACTTCACGAACAA+TGG + chr2.3:59836484-59836503 None:intergenic 40.0%
GTGTTGAATGATTAGTGCTG+AGG + chr2.3:59837653-59837672 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+GGG + chr2.3:59838606-59838625 None:intergenic 40.0%
TACCGCTGAAGTTGTACAAT+CGG + chr2.3:59838575-59838594 None:intergenic 40.0%
TAGGGCTGCTATGATCAAAA+TGG - chr2.3:59838854-59838873 MS.gene74559:CDS 40.0%
TCAGCACAAGAAACTGTGTT+AGG + chr2.3:59838078-59838097 None:intergenic 40.0%
TGGACAAGTGTTCCTGTAAA+AGG + chr2.3:59836451-59836470 None:intergenic 40.0%
TGTGATCCATGATTGCAACA+GGG - chr2.3:59837922-59837941 MS.gene74559:intron 40.0%
! GTTCCTTTAGGAAGAAGAGA+TGG - chr2.3:59838265-59838284 MS.gene74559:intron 40.0%
! TCAGTAGTATTGAAAGGAGC+TGG + chr2.3:59838328-59838347 None:intergenic 40.0%
!! AATAGCTTTGTGCTGTGTAG+TGG - chr2.3:59836377-59836396 MS.gene74559:CDS 40.0%
!! GAATGTATAGGAGCATCACA+AGG + chr2.3:59836796-59836815 None:intergenic 40.0%
!!! TAGCTTTTTTTGGTAGTGGC+CGG + chr2.3:59836992-59837011 None:intergenic 40.0%
AAATTGGTAAGGTTCGTGCC+AGG + chr2.3:59838669-59838688 None:intergenic 45.0%
ACAAGACTAGCAAGCATACG+AGG + chr2.3:59836525-59836544 None:intergenic 45.0%
AGATTCATCTGAGGAGGGTA+TGG - chr2.3:59838980-59838999 MS.gene74559:CDS 45.0%
AGCCGATTGTACAACTTCAG+CGG - chr2.3:59838570-59838589 MS.gene74559:intron 45.0%
AGGTCTCGATACTACTGATC+TGG - chr2.3:59838375-59838394 MS.gene74559:intron 45.0%
GGTATATCCGTATAAGACGG+TGG - chr2.3:59837351-59837370 MS.gene74559:CDS 45.0%
GTTCGAACCACCGTCTTATA+CGG + chr2.3:59837361-59837380 None:intergenic 45.0%
TCACAACCCTGTTGCAATCA+TGG + chr2.3:59837931-59837950 None:intergenic 45.0%
TCAGCAGATTCATCTGAGGA+GGG - chr2.3:59838975-59838994 MS.gene74559:CDS 45.0%
TCTAATCTCTCCTTGGTTCC+CGG + chr2.3:59838898-59838917 None:intergenic 45.0%
TTGCGCACAATATGTCCCAA+TGG - chr2.3:59838639-59838658 MS.gene74559:intron 45.0%
TTGTACAACTTCAGCGGTAC+GGG - chr2.3:59838576-59838595 MS.gene74559:intron 45.0%
! AAAGCTGCATTTGCTGCTCA+AGG - chr2.3:59838355-59838374 MS.gene74559:intron 45.0%
!! GATTTGTCCCTCGGATTAGT+CGG + chr2.3:59837293-59837312 None:intergenic 45.0%
!! GTATGCTTGCTAGTCTTGTC+AGG - chr2.3:59836526-59836545 MS.gene74559:CDS 45.0%
!!! AGCTTTTTTTGGTAGTGGCC+GGG + chr2.3:59836991-59837010 None:intergenic 45.0%
!! ATATAATATAAATTAGAATA+AGG - chr2.3:59836736-59836755 MS.gene74559:CDS 5.0%
AATACCGGGTTCGATTCCCA+GGG + chr2.3:59837556-59837575 None:intergenic 50.0%
AATAGGCAGATGGTCCTGAC+TGG - chr2.3:59838239-59838258 MS.gene74559:intron 50.0%
ACTGATCTGGTTGCACTCTC+CGG - chr2.3:59838388-59838407 MS.gene74559:intron 50.0%
CCTAAAGGAACCTTCCAGTC+AGG + chr2.3:59838256-59838275 None:intergenic 50.0%
CCTGACTGGAAGGTTCCTTT+AGG - chr2.3:59838253-59838272 MS.gene74559:intron 50.0%
CGCACAATATGTCCCAATGG+TGG - chr2.3:59838642-59838661 MS.gene74559:intron 50.0%
CTAATCCGGCTCATGCATAG+AGG - chr2.3:59837504-59837523 MS.gene74559:intron 50.0%
CTCAGCAGATTCATCTGAGG+AGG - chr2.3:59838974-59838993 MS.gene74559:CDS 50.0%
CTCCTCAGATGAATCTGCTG+AGG + chr2.3:59838976-59838995 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr2.3:59836928-59836947 MS.gene74559:intron 50.0%
GTGCACATTATTGTAGCCGC+CGG + chr2.3:59837863-59837882 None:intergenic 50.0%
TGCCTCAGCAGATTCATCTG+AGG - chr2.3:59838971-59838990 MS.gene74559:CDS 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG - chr2.3:59836387-59836406 MS.gene74559:CDS 50.0%
! TTTTCTTCCTTTCGCACCGG+TGG - chr2.3:59837474-59837493 MS.gene74559:intron 50.0%
!! ATATGTCCCAATGGTGGACC+TGG - chr2.3:59838648-59838667 MS.gene74559:intron 50.0%
!! GGATTAGTCGGTCCTTGGAT+CGG + chr2.3:59837281-59837300 None:intergenic 50.0%
!!! GCTTTTTTTGGTAGTGGCCG+GGG + chr2.3:59836990-59837009 None:intergenic 50.0%
AATCGAACCCGGTATTCCCC+GGG - chr2.3:59837560-59837579 MS.gene74559:intron 55.0%
ATACCGGGTTCGATTCCCAG+GGG + chr2.3:59837555-59837574 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr2.3:59836927-59836946 None:intergenic 55.0%
CCAAGGACCGACTAATCCGA+GGG - chr2.3:59837283-59837302 MS.gene74559:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr2.3:59836924-59836943 MS.gene74559:intron 55.0%
GAATACCGGGTTCGATTCCC+AGG + chr2.3:59837557-59837576 None:intergenic 55.0%
GAATCGAACCCGGTATTCCC+CGG - chr2.3:59837559-59837578 MS.gene74559:intron 55.0%
GCATGCCTCTATGCATGAGC+CGG + chr2.3:59837512-59837531 None:intergenic 55.0%
GGTGTGTTAACCGGGAACCA+AGG - chr2.3:59838885-59838904 MS.gene74559:CDS 55.0%
TCCAAGGACCGACTAATCCG+AGG - chr2.3:59837282-59837301 MS.gene74559:CDS 55.0%
TTCCCAGGGGGAACAACTCT+TGG + chr2.3:59837542-59837561 None:intergenic 55.0%
TTCGTGCCAGGTCCACCATT+GGG + chr2.3:59838657-59838676 None:intergenic 55.0%
! ATGCATAGAGGCATGCGCAC+TGG - chr2.3:59837516-59837535 MS.gene74559:intron 55.0%
AAGGTCCGGGCTTCAAACCC+CGG - chr2.3:59836970-59836989 MS.gene74559:CDS 60.0%
CCAAGTTGCTTGGGCTCCAG+TGG + chr2.3:59837610-59837629 None:intergenic 60.0%
CCACTGGAGCCCAAGCAACT+TGG - chr2.3:59837607-59837626 MS.gene74559:intron 60.0%
CCGGTGGTGCACGACTAATC+CGG - chr2.3:59837490-59837509 MS.gene74559:intron 60.0%
GGACGGTGGGATTTGTCCCT+CGG + chr2.3:59837302-59837321 None:intergenic 60.0%
GGCAGATGGTCCTGACTGGA+AGG - chr2.3:59838243-59838262 MS.gene74559:intron 60.0%
GGCCAAGAGTTGTTCCCCCT+GGG - chr2.3:59837537-59837556 MS.gene74559:intron 60.0%
GTGGCAAGGAGCTCCTTCCA+AGG + chr2.3:59837591-59837610 None:intergenic 60.0%
GTTCGTGCCAGGTCCACCAT+TGG + chr2.3:59838658-59838677 None:intergenic 60.0%
TACCGGGTTCGATTCCCAGG+GGG + chr2.3:59837554-59837573 None:intergenic 60.0%
TGGAAGGAGCTCCTTGCCAC+TGG - chr2.3:59837591-59837610 MS.gene74559:intron 60.0%
TGGCCAAGAGTTGTTCCCCC+TGG - chr2.3:59837536-59837555 MS.gene74559:intron 60.0%
TTCCCCCTGGGAATCGAACC+CGG - chr2.3:59837549-59837568 MS.gene74559:intron 60.0%
TTGCTTGGGCTCCAGTGGCA+AGG + chr2.3:59837605-59837624 None:intergenic 60.0%
!! CCCTCGGATTAGTCGGTCCT+TGG + chr2.3:59837286-59837305 None:intergenic 60.0%
!! CCGGATTAGTCGTGCACCAC+CGG + chr2.3:59837493-59837512 None:intergenic 60.0%
AGGACGTGCCCGGGGAATAC+CGG + chr2.3:59837571-59837590 None:intergenic 65.0%
CTCCTTCCAAGGACGTGCCC+GGG + chr2.3:59837580-59837599 None:intergenic 65.0%
GCTCCTTCCAAGGACGTGCC+CGG + chr2.3:59837581-59837600 None:intergenic 65.0%
GTATTCCCCGGGCACGTCCT+TGG - chr2.3:59837571-59837590 MS.gene74559:intron 65.0%
TCCTTCCAAGGACGTGCCCG+GGG + chr2.3:59837579-59837598 None:intergenic 65.0%
TCGTGCACCACCGGTGCGAA+AGG + chr2.3:59837484-59837503 None:intergenic 65.0%
! AGTGGCCGGGGTTTGAAGCC+CGG + chr2.3:59836978-59836997 None:intergenic 65.0%
GGACGTGCCCGGGGAATACC+GGG + chr2.3:59837570-59837589 None:intergenic 70.0%
TCCCCGGGCACGTCCTTGGA+AGG - chr2.3:59837575-59837594 MS.gene74559:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 59836354 59839016 59836354 ID=MS.gene74559
chr2.3 mRNA 59836354 59839016 59836354 ID=MS.gene74559.t1;Parent=MS.gene74559
chr2.3 exon 59838795 59839016 59838795 ID=MS.gene74559.t1.exon1;Parent=MS.gene74559.t1
chr2.3 CDS 59838795 59839016 59838795 ID=cds.MS.gene74559.t1;Parent=MS.gene74559.t1
chr2.3 exon 59837236 59837427 59837236 ID=MS.gene74559.t1.exon2;Parent=MS.gene74559.t1
chr2.3 CDS 59837236 59837427 59837236 ID=cds.MS.gene74559.t1;Parent=MS.gene74559.t1
chr2.3 exon 59836961 59837126 59836961 ID=MS.gene74559.t1.exon3;Parent=MS.gene74559.t1
chr2.3 CDS 59836961 59837126 59836961 ID=cds.MS.gene74559.t1;Parent=MS.gene74559.t1
chr2.3 exon 59836354 59836841 59836354 ID=MS.gene74559.t1.exon4;Parent=MS.gene74559.t1
chr2.3 CDS 59836354 59836841 59836354 ID=cds.MS.gene74559.t1;Parent=MS.gene74559.t1
Gene Sequence

>MS.gene74559

ATGAACTCTCTTCGTGCTGTAGCAATAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGAGTTACCCTTCTCTTCAAATGCACAACTTGATCCATCCTTTTACAGGAACACTTGTCCAAATGTTAGTTCCATTGTTCGTGAAGTCATAAGGAGTGTTTCTAAGAAAGATCCTCGTATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGTATGTATACTTCCTAGTTTTTGCATATTCATTCATTCACTCACTACATGCCCTGTTTTGCTCATTGTACGTGTATGATATAAATTCTTGACTTCTTGGTATACCTATAATCTTATAGTAGTATGATCTTCCCATTTAAGTAGAATTAGTACATAGTAAGATATAATATAAATTAGAATAAGGTCAAATATAGCAAATAAATGATTATTTAGCATATCCTTGTGATGCTCCTATACATTCTACCACTAATAGTAAAAAATATTAAGTAATATATACCTACCAAACTTGAGTTGGAAAAATGATTTAACTTACTTAATAACCCGGCTGAATCAAAGCTATTTTTCACGTCCTCGTGAGCTTAGCTCAGTTGGTTGGAAAATGCATAAAAATATGCAAGGTCCGGGCTTCAAACCCCGGCCACTACCAAAAAAAGCTATTTTTCACATATTTTGAGGGTTAAAATGAATAACAAATAGAATACTATTAAATGTTTTGCCTTCTGTTTAATTAAAATAAAATCATTCATTAGTATGCTTAATATTTATAGCTTAAGGTGTATCGATAACTCTTTTTTTCCTTTTTACCAAGAGAGATTTTTTTGACTCATTTAGAAGCAATAGAGTTGGATCTATCTAGCTATAATAACTAGTAGTATTTCACGATATGGTGTACCAAATTTTATTTTTTTTAAAAACTCAGTATCCGATCCAAGGACCGACTAATCCGAGGGACAAATCCCACCGTCCACTTTATTTTAAGTTGTTCACATTTAATTGGTATATCCGTATAAGACGGTGGTTCGAACAAGATTAATTATATCCATTGAATGTAACATGTCAGTAATTAATAAAAAAATACATTATTAATTTTCTCAAAAAAAAAAACATTATGACATTTTTTTTCTTCCTTTCGCACCGGTGGTGCACGACTAATCCGGCTCATGCATAGAGGCATGCGCACTGGCCAAGAGTTGTTCCCCCTGGGAATCGAACCCGGTATTCCCCGGGCACGTCCTTGGAAGGAGCTCCTTGCCACTGGAGCCCAAGCAACTTGGTTAAAAAAAAAAAAAAAAAACCTCAGCACTAATCATTCAACACTCTATTTTCAATGTTTTCTAATTCTAATACACACTAAAAAAAAACTCCAAATTATTGCATACTTAGTAATACAAAGAGATTGTATAAAGTACTATTTCTTTTTTAAATATTTCAATCCAATCTTTCTTTTTTGAAAGATAAAGTTATCCATGGCCAAAAGGTTTTAAAATCTGTTATATAAAGTTATCCGGCGGCTACAATAATGTGCACAATATCATTATGCTTTTGTTATAACAATAGTTTTCATTATGTGATCCATGATTGCAACAGGGTTGTGATGCATCAGTTTTACTAAACAAAACTGATACCGTTGTGAGTGAACAAGATGCTTTTCCAAACAGAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAAGGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCTCTTTCTGCTGAATTATCATCTACACTGGTATATATATGCCTCAAACTATACTATATATTTTTCTCATTTACCATTGAATTTTCAAATTCAATTTCTTATTAATTCTGCTTATTTGTTTTGTGATGAAATAAAATAGGCAGATGGTCCTGACTGGAAGGTTCCTTTAGGAAGAAGAGATGGTTTAACAGCAAACCAATTACTTGCTAATAAAAATCTTCCAGCTCCTTTCAATACTACTGATGAACTTAAAGCTGCATTTGCTGCTCAAGGTCTCGATACTACTGATCTGGTTGCACTCTCCGGTATGTAACATTTTTTAAGTTTTTGTTTCAAAAATTCTAATTGGTCGTTACAATGATGACGCGAATGTTACAAGAATAATATATATGATTATGTATTTATATATGTTTCTCGATTTCAGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGCCGATTGTACAACTTCAGCGGTACGGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACAACTCCTGATAAATTTGACAAGAACTATTACTCTAATCTTCAAGTGAAAAAAGGTTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTTCAGATACCATTAGCATTGTCAACAAATTCGCAACCGATCAAAAAGCTTTTTTTGAGAGCTTTAGGGCTGCTATGATCAAAATGGGAAATATTGGTGTGTTAACCGGGAACCAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCAGCAGAACTTGGTCTTATCAATGTTGCCTCAGCAGATTCATCTGAGGAGGGTATGGTTAGCTCAATGTAA
Protein sequence

>MS.gene74559.t1

MNSLRAVAIALCCVVVVLGELPFSSNAQLDPSFYRNTCPNVSSIVREVIRSVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVVSEQDAFPNRNSLRGLDVVNQIKTAVEKACPNTVSCADILALSAELSSTLADGPDWKVPLGRRDGLTANQLLANKNLPAPFNTTDELKAAFAAQGLDTTDLVALSGAHTFGRAHCSLFVSRLYNFSGTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGSDTISIVNKFATDQKAFFESFRAAMIKMGNIGVLTGNQGEIRKQCNFVNSKSAELGLINVASADSSEEGMVSSM