AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02078.t1 MTR_2g029740 96.620 355 12 0 1 355 1 355 0.0 707
MS.gene02078.t1 MTR_2g029750 85.070 355 52 1 1 355 1 354 0.0 623
MS.gene02078.t1 MTR_2g028980 79.155 355 74 0 1 355 1 355 0.0 582
MS.gene02078.t1 MTR_2g029800 75.775 355 84 1 1 355 1 353 0.0 546
MS.gene02078.t1 MTR_2g029820 72.394 355 98 0 1 355 1 355 0.0 532
MS.gene02078.t1 MTR_2g029815 72.958 355 93 2 1 355 1 352 0.0 523
MS.gene02078.t1 MTR_2g029830 69.553 358 103 3 1 355 1 355 4.66e-174 488
MS.gene02078.t1 MTR_2g029850 67.514 354 112 1 1 354 1 351 1.32e-169 476
MS.gene02078.t1 MTR_2g029860 67.606 355 111 3 1 354 1 352 1.02e-167 472
MS.gene02078.t1 MTR_2g029560 65.994 347 111 2 1 347 1 340 5.23e-166 467
MS.gene02078.t1 MTR_2g029910 64.124 354 122 2 2 354 3 352 9.58e-164 461
MS.gene02078.t1 MTR_2g029730 65.569 334 109 2 1 333 1 329 3.05e-157 445
MS.gene02078.t1 MTR_2g029830 72.792 283 76 1 74 355 5 287 1.40e-145 413
MS.gene02078.t1 MTR_7g093370 58.306 307 127 1 25 330 65 371 7.55e-126 366
MS.gene02078.t1 MTR_1g054205 56.270 311 135 1 21 330 16 326 1.91e-122 356
MS.gene02078.t1 MTR_5g021060 53.974 302 138 1 29 330 30 330 3.79e-111 327
MS.gene02078.t1 MTR_8g076820 50.662 302 148 1 29 330 30 330 1.75e-105 313
MS.gene02078.t1 MTR_4g125940 50.453 331 158 3 2 330 3 329 1.59e-104 310
MS.gene02078.t1 MTR_2g040000 49.346 306 150 2 28 330 28 331 6.01e-100 299
MS.gene02078.t1 MTR_1g022970 50.000 302 151 0 29 330 46 347 9.45e-99 296
MS.gene02078.t1 MTR_3g094650 49.074 324 150 5 5 326 8 318 1.91e-97 292
MS.gene02078.t1 MTR_4g125940 54.182 275 122 2 58 330 2 274 1.13e-96 288
MS.gene02078.t1 MTR_7g072510 45.538 325 160 3 6 330 5 312 1.40e-95 287
MS.gene02078.t1 MTR_5g074970 48.780 328 155 5 7 330 8 326 2.30e-93 282
MS.gene02078.t1 MTR_5g017860 47.869 305 155 3 27 330 25 326 2.57e-93 281
MS.gene02078.t1 MTR_3g466200 47.531 324 154 6 10 330 10 320 2.97e-93 281
MS.gene02078.t1 MTR_4g029200 47.097 310 155 2 21 330 38 338 3.93e-93 281
MS.gene02078.t1 MTR_3g072190 48.845 303 146 2 28 330 25 318 9.29e-93 280
MS.gene02078.t1 MTR_5g083860 47.249 309 152 4 24 330 26 325 1.94e-92 279
MS.gene02078.t1 MTR_2g084020 45.860 314 162 2 17 330 13 318 3.13e-92 278
MS.gene02078.t1 MTR_4g029170 47.170 318 157 4 15 330 13 321 4.48e-92 278
MS.gene02078.t1 MTR_2g084080 45.000 320 167 2 11 330 7 317 8.99e-92 277
MS.gene02078.t1 MTR_4g083710 46.224 331 164 5 3 330 5 324 2.18e-91 276
MS.gene02078.t1 MTR_4g029190 48.377 308 147 4 26 330 42 340 3.04e-91 277
MS.gene02078.t1 MTR_4g122640 47.157 299 153 3 33 330 42 336 5.37e-91 276
MS.gene02078.t1 MTR_4g030890 44.984 309 165 3 24 332 95 398 7.69e-91 278
MS.gene02078.t1 MTR_7g072480 48.197 305 149 2 26 330 21 316 1.76e-90 274
MS.gene02078.t1 MTR_5g017850 47.059 306 156 4 27 330 25 326 2.40e-90 274
MS.gene02078.t1 MTR_4g029180 48.333 300 144 4 33 330 31 321 6.05e-90 273
MS.gene02078.t1 MTR_4g031140 43.831 308 168 3 25 332 24 326 8.02e-90 273
MS.gene02078.t1 MTR_2g084000 46.885 305 154 2 26 330 23 319 1.10e-89 272
MS.gene02078.t1 MTR_2g084010 45.928 307 158 2 24 330 20 318 2.35e-89 271
MS.gene02078.t1 MTR_3g094670 46.341 328 161 5 1 326 4 318 3.04e-89 271
MS.gene02078.t1 MTR_2g084110 44.410 322 170 2 9 330 5 317 4.05e-89 271
MS.gene02078.t1 MTR_3g094630 46.988 332 161 5 1 330 4 322 1.39e-88 269
MS.gene02078.t1 MTR_2g084090 44.272 323 170 3 9 330 5 318 1.75e-88 269
MS.gene02078.t1 MTR_5g074740 45.312 320 164 4 15 331 11 322 2.39e-88 269
MS.gene02078.t1 MTR_5g074760 45.312 320 164 4 15 331 11 322 2.75e-88 269
MS.gene02078.t1 MTR_4g046713 44.817 328 170 5 4 330 9 326 7.05e-88 268
MS.gene02078.t1 MTR_5g049280 43.692 325 174 6 14 330 14 337 1.18e-87 268
MS.gene02078.t1 MTR_1g115900 43.438 320 170 4 13 330 11 321 1.24e-86 265
MS.gene02078.t1 MTR_3g466180 45.779 308 158 2 23 330 25 323 2.82e-86 263
MS.gene02078.t1 MTR_5g014100 46.358 302 158 2 33 330 30 331 5.03e-85 261
MS.gene02078.t1 MTR_4g074995 44.109 331 158 5 3 330 2 308 8.80e-85 259
MS.gene02078.t1 MTR_2g008710 46.026 302 152 5 33 330 31 325 9.42e-85 259
MS.gene02078.t1 MTR_5g074860 45.574 305 155 4 25 326 25 321 1.82e-84 259
MS.gene02078.t1 MTR_5g074710 44.375 320 167 4 15 331 11 322 5.41e-84 258
MS.gene02078.t1 MTR_3g092990 42.138 318 181 2 14 330 11 326 6.15e-83 255
MS.gene02078.t1 MTR_2g088770 43.396 318 174 5 15 330 12 325 9.29e-83 254
MS.gene02078.t1 MTR_2g437770 45.819 299 150 6 33 330 54 341 9.52e-83 255
MS.gene02078.t1 MTR_4g133800 45.151 299 153 6 34 331 46 334 1.25e-82 254
MS.gene02078.t1 MTR_7g107520 43.438 320 175 4 11 330 7 320 1.80e-81 251
MS.gene02078.t1 MTR_4g114210 42.633 319 173 5 16 330 8 320 1.54e-80 249
MS.gene02078.t1 MTR_7g086820 42.810 306 166 5 27 332 18 314 3.68e-80 248
MS.gene02078.t1 MTR_3g467600 44.337 309 162 3 25 330 23 324 3.87e-80 248
MS.gene02078.t1 MTR_4g074990 41.994 331 162 5 3 330 2 305 6.99e-80 246
MS.gene02078.t1 MTR_2g029880 59.346 214 73 3 141 354 9 208 1.13e-79 243
MS.gene02078.t1 MTR_7g026990 41.801 311 171 3 20 330 22 322 2.93e-79 246
MS.gene02078.t1 MTR_5g022870 41.195 318 175 8 14 330 10 316 3.86e-76 237
MS.gene02078.t1 MTR_1g086320 39.820 334 193 4 1 330 4 333 4.51e-76 238
MS.gene02078.t1 MTR_4g074980 40.854 328 159 6 3 330 2 294 1.26e-75 235
MS.gene02078.t1 MTR_1g101830 40.523 306 176 4 25 330 23 322 1.39e-75 236
MS.gene02078.t1 MTR_3g072190 48.263 259 125 2 72 330 2 251 2.04e-75 233
MS.gene02078.t1 MTR_1g086490 38.988 336 192 3 6 330 7 340 5.11e-75 235
MS.gene02078.t1 MTR_8g075100 40.468 299 168 6 33 330 30 319 1.74e-74 233
MS.gene02078.t1 MTR_5g016010 37.952 332 199 4 1 329 1 328 3.72e-73 230
MS.gene02078.t1 MTR_1g038680 41.722 302 170 5 33 330 33 332 3.76e-73 230
MS.gene02078.t1 MTR_4g087965 42.623 305 168 5 28 327 41 343 1.75e-71 226
MS.gene02078.t1 MTR_2g008160 40.514 311 173 6 25 330 20 323 2.30e-71 225
MS.gene02078.t1 MTR_6g043240 44.194 310 155 8 33 338 46 341 3.16e-71 226
MS.gene02078.t1 MTR_4g095450 43.492 315 162 8 21 329 19 323 3.46e-71 225
MS.gene02078.t1 MTR_3g092990 39.937 318 177 3 14 330 11 315 1.14e-70 223
MS.gene02078.t1 MTR_1g009750 42.053 302 167 6 33 330 31 328 1.65e-70 223
MS.gene02078.t1 MTR_1g025980 40.268 298 169 6 33 329 28 317 1.87e-70 223
MS.gene02078.t1 MTR_6g027440 39.688 320 184 6 11 330 4 314 2.12e-70 223
MS.gene02078.t1 MTR_1g077000 40.468 299 163 7 33 330 43 327 3.83e-70 222
MS.gene02078.t1 MTR_6g043280 41.009 317 167 7 17 332 37 334 3.64e-69 220
MS.gene02078.t1 MTR_7g029030 38.623 334 187 6 1 330 1 320 3.64e-69 219
MS.gene02078.t1 MTR_0155s0040 37.231 325 185 6 6 330 10 315 4.06e-69 219
MS.gene02078.t1 MTR_4g074980 44.061 261 134 4 3 260 2 253 8.46e-69 216
MS.gene02078.t1 MTR_4g132490 38.750 320 186 5 16 330 13 327 1.20e-68 218
MS.gene02078.t1 MTR_6g043460 43.333 300 157 6 29 326 36 324 1.22e-68 219
MS.gene02078.t1 MTR_7g086870 40.000 300 164 6 33 330 26 311 2.04e-68 217
MS.gene02078.t1 MTR_2g008730 46.939 245 122 4 90 330 61 301 1.02e-64 207
MS.gene02078.t1 MTR_5g033470 39.474 304 175 6 33 330 77 377 2.98e-64 209
MS.gene02078.t1 MTR_4g127670 39.274 303 174 5 28 326 23 319 8.41e-64 206
MS.gene02078.t1 MTR_2g099175 37.864 309 180 6 28 331 35 336 1.09e-63 206
MS.gene02078.t1 MTR_5g074860 38.689 305 137 4 25 326 25 282 1.64e-63 204
MS.gene02078.t1 MTR_1g090760 36.716 335 204 6 1 331 1 331 4.89e-63 204
MS.gene02078.t1 MTR_2g067440 36.000 325 174 6 33 327 64 384 2.33e-61 201
MS.gene02078.t1 MTR_1g009750 38.742 302 160 7 33 330 31 311 1.72e-60 197
MS.gene02078.t1 MTR_3g105790 38.154 325 185 4 4 326 8 318 4.77e-60 196
MS.gene02078.t1 MTR_2g078610 34.943 352 188 7 14 327 55 403 1.22e-59 197
MS.gene02078.t1 MTR_2g077990 34.943 352 188 7 14 327 55 403 3.07e-59 196
MS.gene02078.t1 MTR_8g062780 36.334 311 188 5 25 330 19 324 1.33e-57 190
MS.gene02078.t1 MTR_1g066710 35.505 307 187 4 27 330 25 323 2.64e-56 186
MS.gene02078.t1 MTR_1g066380 35.831 307 186 4 27 330 25 323 5.70e-56 186
MS.gene02078.t1 MTR_2g078280 35.191 341 180 7 14 316 55 392 7.99e-56 187
MS.gene02078.t1 MTR_0286s0010 36.774 310 187 6 25 330 30 334 1.98e-55 184
MS.gene02078.t1 MTR_6g008075 36.774 310 187 6 25 330 30 334 1.98e-55 184
MS.gene02078.t1 MTR_4g132110 36.482 307 184 4 33 336 36 334 3.18e-55 184
MS.gene02078.t1 MTR_2g067450 36.877 301 180 6 33 329 15 309 9.25e-55 182
MS.gene02078.t1 MTR_2g008160 35.691 311 153 6 25 330 20 288 1.39e-54 181
MS.gene02078.t1 MTR_1g066640 35.505 307 187 4 27 330 25 323 1.77e-54 182
MS.gene02078.t1 MTR_4g132110 36.538 312 182 6 33 336 36 339 9.05e-54 180
MS.gene02078.t1 MTR_1g066680 35.179 307 187 5 27 330 25 322 1.44e-53 179
MS.gene02078.t1 MTR_0147s0010 34.242 330 165 6 26 327 74 379 4.56e-52 177
MS.gene02078.t1 MTR_1g066380 36.398 261 155 4 73 330 3 255 5.09e-46 157
MS.gene02078.t1 MTR_3g072210 45.312 192 96 3 140 330 55 238 5.91e-45 154
MS.gene02078.t1 MTR_5g074700 40.343 233 114 5 102 331 5 215 2.89e-44 152
MS.gene02078.t1 MTR_2g008160 45.294 170 89 3 25 194 20 185 1.21e-43 150
MS.gene02078.t1 MTR_3g105790 39.662 237 139 2 96 330 12 246 8.33e-42 146
MS.gene02078.t1 MTR_7g072490 39.357 249 88 5 75 323 2 187 1.12e-38 137
MS.gene02078.t1 MTR_2g029930 61.062 113 16 3 14 112 4 102 6.82e-36 126
MS.gene02078.t1 MTR_3g072260 56.190 105 46 0 33 137 30 134 6.85e-33 120
MS.gene02078.t1 MTR_2g078560 29.646 226 126 4 135 329 96 319 2.18e-28 112
MS.gene02078.t1 MTR_5g058120 39.264 163 86 3 164 326 6 155 6.50e-26 104
MS.gene02078.t1 MTR_2g077980 29.643 280 145 10 91 327 11 281 2.50e-24 101
MS.gene02078.t1 MTR_7g086790 32.812 192 107 4 76 267 17 186 6.25e-23 95.1
MS.gene02078.t1 MTR_1g089005 39.552 134 67 3 14 141 7 132 1.35e-21 90.5
MS.gene02078.t1 MTR_6g048160 61.972 71 23 2 68 138 22 88 2.61e-20 84.7
MS.gene02078.t1 MTR_3g462850 37.324 142 84 5 193 330 9 149 1.25e-19 84.7
MS.gene02078.t1 MTR_4g031040 31.429 175 76 3 88 262 1 131 1.49e-18 81.3
MS.gene02078.t1 MTR_4g114220 50.000 78 29 2 55 132 29 96 2.33e-18 80.9
MS.gene02078.t1 MTR_1g098320 44.186 86 44 2 251 334 47 130 8.04e-16 73.9
MS.gene02078.t1 MTR_4g012865 48.529 68 35 0 33 100 81 148 3.71e-14 69.7
MS.gene02078.t1 MTR_7g086810 34.711 121 53 1 27 147 4 98 5.68e-14 71.2
MS.gene02078.t1 MTR_3g088160 26.820 261 153 9 63 312 121 354 5.58e-13 69.7
MS.gene02078.t1 MTR_3g088160 26.820 261 153 9 63 312 121 354 6.93e-13 69.7
MS.gene02078.t1 MTR_7g107500 43.902 82 43 2 249 330 19 97 7.53e-13 64.3
MS.gene02078.t1 MTR_5g074770 32.990 97 65 0 233 329 12 108 1.70e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02078.t1 AT2G38380 57.453 322 134 2 25 343 27 348 2.38e-131 379
MS.gene02078.t1 AT2G38390 55.590 322 140 2 25 343 27 348 4.39e-127 369
MS.gene02078.t1 AT5G06720 54.890 317 143 0 14 330 17 333 1.82e-123 358
MS.gene02078.t1 AT4G08770 56.270 311 134 2 25 333 20 330 1.86e-123 359
MS.gene02078.t1 AT4G08780 54.984 311 138 2 25 333 20 330 2.18e-122 356
MS.gene02078.t1 AT5G06730 53.125 320 150 0 14 333 18 337 1.33e-121 355
MS.gene02078.t1 AT3G32980 53.153 333 147 3 25 355 27 352 7.43e-121 353
MS.gene02078.t1 AT3G49120 52.553 333 149 3 25 355 28 353 8.64e-120 350
MS.gene02078.t1 AT3G49110 52.553 333 149 3 25 355 29 354 7.98e-119 348
MS.gene02078.t1 AT5G19880 50.938 320 149 5 15 330 14 329 2.02e-109 323
MS.gene02078.t1 AT5G66390 49.026 308 156 1 23 330 27 333 2.67e-104 310
MS.gene02078.t1 AT1G44970 51.447 311 149 1 20 330 38 346 1.68e-102 306
MS.gene02078.t1 AT4G36430 47.812 320 159 2 11 330 19 330 7.96e-102 303
MS.gene02078.t1 AT5G19890 52.941 306 136 4 27 330 28 327 1.69e-101 303
MS.gene02078.t1 AT2G18140 48.243 313 157 2 18 330 28 335 2.64e-100 300
MS.gene02078.t1 AT2G18150 48.675 302 154 1 29 330 36 336 8.34e-100 298
MS.gene02078.t1 AT1G14550 48.039 306 151 3 26 330 23 321 7.47e-97 290
MS.gene02078.t1 AT3G50990 45.455 308 167 1 24 331 36 342 1.91e-92 280
MS.gene02078.t1 AT1G14540 45.846 325 159 4 6 330 8 315 5.84e-91 275
MS.gene02078.t1 AT5G05340 47.059 306 151 4 27 330 28 324 1.14e-90 275
MS.gene02078.t1 AT1G49570 45.574 305 161 3 27 328 46 348 1.64e-90 275
MS.gene02078.t1 AT5G58390 47.573 309 150 5 21 326 13 312 7.23e-89 270
MS.gene02078.t1 AT2G35380 48.675 302 151 3 33 330 34 335 1.04e-88 270
MS.gene02078.t1 AT4G16270 47.368 304 153 5 29 330 50 348 1.43e-88 270
MS.gene02078.t1 AT5G58400 46.557 305 151 5 25 326 26 321 5.43e-87 265
MS.gene02078.t1 AT5G64120 47.492 299 147 6 33 330 39 328 5.47e-87 266
MS.gene02078.t1 AT1G68850 44.884 303 161 6 33 330 34 335 1.64e-86 265
MS.gene02078.t1 AT4G25980 43.252 326 170 6 10 330 11 326 4.10e-85 261
MS.gene02078.t1 AT2G22420 42.345 307 172 3 29 335 23 324 6.30e-85 260
MS.gene02078.t1 AT1G71695 47.249 309 151 6 33 338 48 347 7.45e-84 258
MS.gene02078.t1 AT3G03670 43.750 304 168 2 27 330 21 321 1.34e-83 256
MS.gene02078.t1 AT5G17820 42.763 304 162 5 27 330 22 313 1.65e-82 253
MS.gene02078.t1 AT5G17820 41.956 317 171 6 14 330 63 366 2.48e-81 252
MS.gene02078.t1 AT2G41480 44.918 305 152 6 33 330 33 328 8.95e-81 249
MS.gene02078.t1 AT3G21770 43.226 310 170 5 20 327 20 325 3.13e-80 248
MS.gene02078.t1 AT4G11290 42.593 324 179 6 10 330 7 326 3.26e-79 246
MS.gene02078.t1 AT1G05260 41.566 332 185 6 1 330 1 325 9.20e-79 244
MS.gene02078.t1 AT4G37530 44.194 310 166 5 25 330 23 329 2.73e-78 243
MS.gene02078.t1 AT5G64100 44.850 301 153 6 33 330 41 331 2.87e-78 243
MS.gene02078.t1 AT5G39580 42.598 331 174 8 1 330 4 319 5.86e-78 242
MS.gene02078.t1 AT2G18980 41.791 335 173 8 2 330 5 323 3.94e-76 238
MS.gene02078.t1 AT1G05240 40.777 309 167 6 29 330 26 325 1.33e-75 236
MS.gene02078.t1 AT1G05250 40.777 309 167 6 29 330 26 325 1.33e-75 236
MS.gene02078.t1 AT4G30170 41.748 309 169 5 26 330 24 325 3.02e-75 235
MS.gene02078.t1 AT5G15180 40.940 298 172 4 33 330 36 329 1.08e-74 234
MS.gene02078.t1 AT5G64110 43.854 301 158 5 33 330 38 330 2.45e-74 233
MS.gene02078.t1 AT3G49960 39.634 328 190 4 6 330 7 329 6.85e-74 232
MS.gene02078.t1 AT3G01190 42.282 298 166 5 33 330 30 321 8.03e-74 231
MS.gene02078.t1 AT4G37520 42.532 308 170 5 27 330 25 329 1.21e-73 231
MS.gene02078.t1 AT5G51890 39.088 307 180 5 25 330 22 322 2.71e-73 230
MS.gene02078.t1 AT5G42180 39.130 322 188 5 8 329 3 316 1.84e-72 228
MS.gene02078.t1 AT4G37520 42.208 308 168 6 27 330 25 326 2.06e-72 228
MS.gene02078.t1 AT1G30870 41.368 307 163 7 33 334 55 349 1.41e-71 227
MS.gene02078.t1 AT5G67400 39.818 329 188 6 6 330 7 329 1.13e-70 224
MS.gene02078.t1 AT5G14130 40.439 319 179 6 18 330 17 330 2.83e-68 218
MS.gene02078.t1 AT5G14130 40.439 319 179 6 18 330 58 371 8.28e-68 218
MS.gene02078.t1 AT4G37530 45.349 258 136 4 25 278 23 279 4.08e-67 213
MS.gene02078.t1 AT1G77100 38.602 329 188 6 6 330 1 319 1.29e-66 213
MS.gene02078.t1 AT4G26010 38.462 325 178 8 10 330 3 309 1.88e-66 212
MS.gene02078.t1 AT4G33870 34.441 331 177 5 33 327 72 398 2.25e-66 215
MS.gene02078.t1 AT4G26010 38.462 325 178 8 10 330 31 337 3.40e-66 213
MS.gene02078.t1 AT2G35380 47.773 247 125 3 88 330 1 247 9.68e-66 208
MS.gene02078.t1 AT4G33420 38.769 325 183 8 6 330 17 325 9.69e-66 211
MS.gene02078.t1 AT2G39040 41.346 312 172 7 26 330 43 350 1.31e-65 211
MS.gene02078.t1 AT4G33420 39.871 311 173 7 20 330 76 372 3.24e-65 211
MS.gene02078.t1 AT4G31760 36.527 334 197 5 2 330 3 326 5.33e-65 209
MS.gene02078.t1 AT2G34060 38.961 308 179 6 26 327 39 343 1.40e-63 206
MS.gene02078.t1 AT5G40150 37.778 315 187 4 18 330 21 328 3.45e-63 204
MS.gene02078.t1 AT2G43480 38.339 313 178 7 25 330 31 335 1.08e-62 203
MS.gene02078.t1 AT5G22410 37.459 307 174 10 27 326 26 321 7.41e-62 201
MS.gene02078.t1 AT3G28200 38.636 308 181 6 24 330 16 316 9.55e-62 200
MS.gene02078.t1 AT2G24800 38.217 314 171 5 27 330 29 329 6.24e-61 199
MS.gene02078.t1 AT5G24070 37.829 304 176 6 32 330 40 335 9.52e-61 198
MS.gene02078.t1 AT4G17690 37.417 302 178 5 33 331 30 323 9.41e-59 193
MS.gene02078.t1 AT1G24110 36.111 324 198 6 10 330 5 322 2.14e-57 189
MS.gene02078.t1 AT1G34510 36.646 322 188 6 10 330 3 309 2.15e-56 186
MS.gene02078.t1 AT3G17070 35.347 331 200 8 6 330 17 339 2.22e-55 184
MS.gene02078.t1 AT4G21960 36.513 304 178 6 33 331 35 328 8.56e-55 183
MS.gene02078.t1 AT5G47000 34.219 301 188 5 33 330 37 330 1.09e-53 180
MS.gene02078.t1 AT2G37130 35.275 309 188 5 26 330 27 327 4.63e-52 176
MS.gene02078.t1 AT2G37130 35.430 302 183 5 33 330 3 296 3.10e-51 172
MS.gene02078.t1 AT4G25980 46.561 189 93 4 10 198 56 236 3.68e-48 164
MS.gene02078.t1 AT5G39580 39.496 238 122 7 1 231 4 226 1.14e-41 145
MS.gene02078.t1 AT3G17070 34.962 266 160 8 71 330 18 276 5.51e-39 140
MS.gene02078.t1 AT2G24800 40.698 172 98 1 27 198 29 196 2.04e-34 127
MS.gene02078.t1 AT4G32320 30.566 265 134 10 49 311 105 321 1.56e-15 77.0
MS.gene02078.t1 AT3G42570 33.562 146 84 4 53 196 15 149 1.88e-14 70.5
MS.gene02078.t1 AT1G77490 26.820 261 153 11 63 312 106 339 4.49e-14 73.2
MS.gene02078.t1 AT1G77490 26.820 261 153 11 63 312 106 339 7.62e-14 72.8
MS.gene02078.t1 AT4G35970 30.000 170 105 5 63 231 33 189 3.18e-11 62.8

Find 79 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATTCAATGATTAAAA+TGG 0.110406 2.2:-58242288 MS.gene02078:CDS
CCTCTTAAGGAGTTGATATT+TGG 0.123659 2.2:+58244009 None:intergenic
CAACAATCTTCAAGGTAAAA+AGG 0.186367 2.2:-58242414 MS.gene02078:CDS
AAACGCTATAGAATGCAATT+TGG 0.223355 2.2:+58244842 None:intergenic
ATTTCAGGTGCTCATACATT+TGG 0.279420 2.2:-58242620 MS.gene02078:intron
AGTTCTGGAAGAAAACATTT+TGG 0.283013 2.2:+58242312 None:intergenic
ATGCAATTTGGGACAAGTTT+TGG 0.284651 2.2:+58244854 None:intergenic
GGTAATATTGATGTGCTTAC+TGG 0.295696 2.2:-58242266 MS.gene02078:CDS
CCAAATATCAACTCCTTAAG+AGG 0.308669 2.2:-58244009 MS.gene02078:CDS
TGCTGTGTAGTGGTTGTGTT+TGG 0.336469 2.2:-58244924 MS.gene02078:CDS
AATGAGACTGGCAGGCATTC+GGG 0.339771 2.2:+58244788 None:intergenic
AACGCTATAGAATGCAATTT+GGG 0.358034 2.2:+58244843 None:intergenic
TCATTGAATTTATAAAGTTC+TGG 0.362635 2.2:+58242297 None:intergenic
TAAATCTGCCTTTGCTGCTC+AGG 0.362748 2.2:-58243615 MS.gene02078:CDS
TTTCAGGTGCTCATACATTT+GGG 0.380835 2.2:-58242619 MS.gene02078:intron
CCGGTGTTGAGAACAATTCT+TGG 0.387016 2.2:+58242375 None:intergenic
GGCTGGAATATCTTCTGTTC+TGG 0.391319 2.2:-58243902 MS.gene02078:intron
TCAGCACAAGAAACTCTATT+AGG 0.391364 2.2:+58243940 None:intergenic
TTATACAACTTCAACAATAC+TGG 0.396066 2.2:-58242566 MS.gene02078:CDS
TAATGAGACTGGCAGGCATT+CGG 0.405318 2.2:+58244787 None:intergenic
GATAACATCTAATCCTCTTA+AGG 0.407011 2.2:+58243996 None:intergenic
CTTGCCAATCAAAATCTTCC+AGG 0.414340 2.2:-58243662 MS.gene02078:CDS
CCCAACGACTCCTGATACAT+TGG 0.414820 2.2:-58242450 MS.gene02078:CDS
CTATAGCGTTTAAAGTCTTA+CGG 0.418187 2.2:-58244830 MS.gene02078:CDS
CAATGCCCTCAGAATGGAAC+TGG 0.429041 2.2:-58242494 MS.gene02078:CDS
AACTTCTACAACAATCTTCA+AGG 0.429407 2.2:-58242422 MS.gene02078:CDS
ATAAATTCAATGATTAAAAT+GGG 0.430148 2.2:-58242287 MS.gene02078:CDS
CAGTTCCATTCTGAGGGCAT+TGG 0.438774 2.2:+58242495 None:intergenic
GAATGCCTGCCAGTCTCATT+AGG 0.438956 2.2:-58244785 MS.gene02078:CDS
AAGTCGATCTAGACTGAAGT+TGG 0.444664 2.2:+58243637 None:intergenic
TGGATCAAGTTGTGCATTTG+AGG 0.450793 2.2:+58244887 None:intergenic
TCCAATGTATCAGGAGTCGT+TGG 0.465486 2.2:+58242449 None:intergenic
TGTGTAGTGGTTGTGTTTGG+AGG 0.470520 2.2:-58244921 MS.gene02078:CDS
CTTACGGAAAGTTGCTAAGA+AGG 0.471860 2.2:-58244814 MS.gene02078:CDS
GGGAGGTTCCACTAGGAAGA+AGG 0.478431 2.2:-58243709 MS.gene02078:CDS
CCTAGTGGAACCTCCCAACC+TGG 0.485044 2.2:+58243716 None:intergenic
ATAATCGATCAACGATGAAA+AGG 0.496421 2.2:+58242585 None:intergenic
GTTGTATCAAGAGTTGGATC+GGG 0.497486 2.2:+58242539 None:intergenic
CAATCAAATTAAGACTAAAG+TGG 0.503151 2.2:-58243974 MS.gene02078:CDS
AAGTATGTTGTATCAAGAGT+TGG 0.504944 2.2:+58242533 None:intergenic
TGCTGATATTCTTACACTTG+CGG 0.504955 2.2:-58243923 MS.gene02078:CDS
TGTGGCCTCTACAGAATCAA+TGG 0.508564 2.2:-58242174 MS.gene02078:CDS
GATATTCTTACACTTGCGGC+TGG 0.511248 2.2:-58243919 MS.gene02078:CDS
TGTTGTATCAAGAGTTGGAT+CGG 0.517053 2.2:+58242538 None:intergenic
CGAAACCAATGCCCTCAGAA+TGG 0.518761 2.2:-58242500 MS.gene02078:CDS
GATGTGCTTACTGGAAAGAA+AGG 0.520466 2.2:-58242257 MS.gene02078:CDS
AAATCTGCCTTTGCTGCTCA+GGG 0.521812 2.2:-58243614 MS.gene02078:CDS
AAGTTGTGCATTTGAGGAGA+AGG 0.526618 2.2:+58244893 None:intergenic
AGTCGATCTAGACTGAAGTT+GGG 0.526624 2.2:+58243638 None:intergenic
TATTTCCAGTTCCATTCTGA+GGG 0.531400 2.2:+58242489 None:intergenic
TTATTTCCAGTTCCATTCTG+AGG 0.536049 2.2:+58242488 None:intergenic
AAAGCTGTTGACAATGCTAA+TGG 0.537069 2.2:+58242343 None:intergenic
AAAATGAAGCCTAATGAGAC+TGG 0.538497 2.2:+58244776 None:intergenic
TGCTGCTCAGGGACTTAACA+CGG 0.546163 2.2:-58243603 MS.gene02078:CDS
AACAGCTTTGTGCTGTGTAG+TGG 0.550343 2.2:-58244934 MS.gene02078:CDS
TGAAGCCTAATGAGACTGGC+AGG 0.550706 2.2:+58244780 None:intergenic
CCAGGTTGGGAGGTTCCACT+AGG 0.552931 2.2:-58243716 MS.gene02078:CDS
GTTGACCTAGTAGCACTCTC+AGG 0.553978 2.2:-58243581 MS.gene02078:intron
CCAATGTATCAGGAGTCGTT+GGG 0.556740 2.2:+58242450 None:intergenic
CAAGAATTGTTCTCAACACC+GGG 0.559032 2.2:-58242374 MS.gene02078:CDS
CTCTACAGAATCAATGGAGG+GGG 0.569128 2.2:-58242168 MS.gene02078:CDS
ATATACCTGAGAGTGCTACT+AGG 0.572149 2.2:+58243576 None:intergenic
TCTAGACTGAAGTTGGGACC+TGG 0.575327 2.2:+58243644 None:intergenic
GTTAAGTCCCTGAGCAGCAA+AGG 0.582091 2.2:+58243607 None:intergenic
GCCTCTACAGAATCAATGGA+GGG 0.583397 2.2:-58242170 MS.gene02078:CDS
CCAAGAATTGTTCTCAACAC+CGG 0.585556 2.2:-58242375 MS.gene02078:CDS
AGACTATCCCTTCTTCCTAG+TGG 0.587373 2.2:+58243701 None:intergenic
GGAGGTTCCACTAGGAAGAA+GGG 0.591374 2.2:-58243708 MS.gene02078:CDS
AGTTGTGCATTTGAGGAGAA+GGG 0.593995 2.2:+58244894 None:intergenic
ATGAGACTGGCAGGCATTCG+GGG 0.612771 2.2:+58244789 None:intergenic
ATGCTAATGGTATCTGCACC+CGG 0.620520 2.2:+58242356 None:intergenic
CCCCTCCATTGATTCTGTAG+AGG 0.622006 2.2:+58242169 None:intergenic
TGAATCGGATCTTGCCACTG+TGG 0.631782 2.2:-58242192 MS.gene02078:CDS
CCTCTACAGAATCAATGGAG+GGG 0.644153 2.2:-58242169 MS.gene02078:CDS
GGCCTCTACAGAATCAATGG+AGG 0.646986 2.2:-58242171 MS.gene02078:CDS
AGCTGTTGCTATGACACGAA+AGG 0.649557 2.2:+58244950 None:intergenic
GATCTATTTCCACAGACTGG+GGG 0.672586 2.2:-58243740 MS.gene02078:intron
TCGTTGGGTCGAAATTGACA+CGG 0.709681 2.2:+58242465 None:intergenic
TGATTCTGTAGAGGCCACAG+TGG 0.717951 2.2:+58242178 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTAAATTAACAAGAA+AGG + chr2.2:58242703-58242722 None:intergenic 10.0%
!! ATAAATTCAATGATTAAAAT+GGG - chr2.2:58244818-58244837 MS.gene02078:CDS 10.0%
!! TAAACAAATGATTTAAATTA+TGG + chr2.2:58244127-58244146 None:intergenic 10.0%
!! TATAAATTCAATGATTAAAA+TGG - chr2.2:58244817-58244836 MS.gene02078:CDS 10.0%
!! TGCAAATTTATTAATTATTT+GGG + chr2.2:58244303-58244322 None:intergenic 10.0%
!! TTGCAAATTTATTAATTATT+TGG + chr2.2:58244304-58244323 None:intergenic 10.0%
!!! AATTTTCAACATAATTTTAA+TGG - chr2.2:58242761-58242780 MS.gene02078:intron 10.0%
!!! ATATTTTGAAAAATACTTTA+TGG - chr2.2:58242441-58242460 MS.gene02078:CDS 10.0%
!! ACTATTTACCATAAATAATT+AGG - chr2.2:58244261-58244280 MS.gene02078:intron 15.0%
!! ATTAAAACTTAAAATTGTTG+AGG - chr2.2:58243672-58243691 MS.gene02078:CDS 15.0%
!! CTATTTACCATAAATAATTA+GGG - chr2.2:58244262-58244281 MS.gene02078:intron 15.0%
!! TAAATAACTTGATATTAACA+GGG - chr2.2:58243012-58243031 MS.gene02078:intron 15.0%
!! TAACCAATAAAAAAGATAAA+TGG - chr2.2:58243801-58243820 MS.gene02078:intron 15.0%
!! TATTATCTAAATATCATTGT+TGG + chr2.2:58243591-58243610 None:intergenic 15.0%
!! TTATTTATGGTAAATAGTTA+AGG + chr2.2:58244259-58244278 None:intergenic 15.0%
!! ACTAAAATTTACTTCTCTTT+CGG + chr2.2:58243923-58243942 None:intergenic 20.0%
!! AGTTGATTAAATTCCAATTA+TGG - chr2.2:58242550-58242569 MS.gene02078:CDS 20.0%
!! CTAAATAACTTGATATTAAC+AGG - chr2.2:58243011-58243030 MS.gene02078:intron 20.0%
!! GTTGATTAAATTCCAATTAT+GGG - chr2.2:58242551-58242570 MS.gene02078:CDS 20.0%
!! TCATTGAATTTATAAAGTTC+TGG + chr2.2:58244811-58244830 None:intergenic 20.0%
!!! AATTTAATCAACTCCTTTTA+TGG + chr2.2:58242543-58242562 None:intergenic 20.0%
!!! ACATCCTTGTTATTATTTTT+TGG - chr2.2:58242595-58242614 MS.gene02078:CDS 20.0%
!!! AGATTTTATATTTAAAGACG+TGG + chr2.2:58244072-58244091 None:intergenic 20.0%
!!! ATGCCATTTATCTTTTTTAT+TGG + chr2.2:58243807-58243826 None:intergenic 20.0%
!!! TAACAAGAAATCTTTTGAAT+CGG - chr2.2:58244898-58244917 MS.gene02078:CDS 20.0%
!!! TCAAGTTATTATTTTTCACT+AGG - chr2.2:58242820-58242839 MS.gene02078:intron 20.0%
!!! TGATAATGAAAATTAGTCAA+TGG - chr2.2:58242849-58242868 MS.gene02078:intron 20.0%
! AACAATCTTCAAGGTAAAAA+GGG - chr2.2:58244692-58244711 MS.gene02078:intron 25.0%
! AATACCTTCTCTCTAATTTA+AGG - chr2.2:58242920-58242939 MS.gene02078:intron 25.0%
! ACTAACTAACAATATACGTA+GGG - chr2.2:58242633-58242652 MS.gene02078:intron 25.0%
! AGAGCCAAAAAATAATAACA+AGG + chr2.2:58242602-58242621 None:intergenic 25.0%
! ATACCTTCTCTCTAATTTAA+GGG - chr2.2:58242921-58242940 MS.gene02078:intron 25.0%
! CAATCAAATTAAGACTAAAG+TGG - chr2.2:58243131-58243150 MS.gene02078:intron 25.0%
! CTAACAAATACATAACTTGA+GGG + chr2.2:58242420-58242439 None:intergenic 25.0%
! TAACAAATACATAACTTGAG+GGG + chr2.2:58242419-58242438 None:intergenic 25.0%
! TAATTAACCGTAGATTCATA+GGG - chr2.2:58243876-58243895 MS.gene02078:intron 25.0%
! TCTCTAATCCAATAGTTAAT+TGG + chr2.2:58244200-58244219 None:intergenic 25.0%
! TTATACAACTTCAACAATAC+TGG - chr2.2:58244539-58244558 MS.gene02078:intron 25.0%
! TTTATGAGCCAATTAACTAT+TGG - chr2.2:58244189-58244208 MS.gene02078:intron 25.0%
!! AAATATATAAAAGCACACGA+TGG - chr2.2:58244438-58244457 MS.gene02078:intron 25.0%
!! ATTAACTATTGGATTAGAGA+AGG - chr2.2:58244200-58244219 MS.gene02078:intron 25.0%
!! GCAATGACACTATTAATTTT+TGG + chr2.2:58242736-58242755 None:intergenic 25.0%
!! TGTATGTAGTTTTTGTCTTT+TGG - chr2.2:58242978-58242997 MS.gene02078:intron 25.0%
!! TTAACTATTGGATTAGAGAA+GGG - chr2.2:58244201-58244220 MS.gene02078:intron 25.0%
AAAACTCATCAAGTCTAAAG+TGG + chr2.2:58243708-58243727 None:intergenic 30.0%
AAAATACGAGTTCGAATCAT+AGG + chr2.2:58243960-58243979 None:intergenic 30.0%
AAACGCTATAGAATGCAATT+TGG + chr2.2:58242266-58242285 None:intergenic 30.0%
AACGCTATAGAATGCAATTT+GGG + chr2.2:58242265-58242284 None:intergenic 30.0%
AACTTCTACAACAATCTTCA+AGG - chr2.2:58244683-58244702 MS.gene02078:intron 30.0%
AAGTATGTTGTATCAAGAGT+TGG + chr2.2:58244575-58244594 None:intergenic 30.0%
ACTTGTGCCCTAATTATTTA+TGG + chr2.2:58244272-58244291 None:intergenic 30.0%
AGAAATGTATTGCCCATAAT+TGG + chr2.2:58242566-58242585 None:intergenic 30.0%
ATAATCGATCAACGATGAAA+AGG + chr2.2:58244523-58244542 None:intergenic 30.0%
ATCAAATGATTGAGCTTTAC+TGG + chr2.2:58244017-58244036 None:intergenic 30.0%
CAACAATCTTCAAGGTAAAA+AGG - chr2.2:58244691-58244710 MS.gene02078:intron 30.0%
CACTAACTAACAATATACGT+AGG - chr2.2:58242632-58242651 MS.gene02078:intron 30.0%
CTAATTAACCGTAGATTCAT+AGG - chr2.2:58243875-58243894 MS.gene02078:intron 30.0%
GATAACATCTAATCCTCTTA+AGG + chr2.2:58243112-58243131 None:intergenic 30.0%
GCTAACAAATACATAACTTG+AGG + chr2.2:58242421-58242440 None:intergenic 30.0%
TACAAAACTGCTTCAATTTC+AGG - chr2.2:58244470-58244489 MS.gene02078:intron 30.0%
TACGTAAACGTAACCATAAA+AGG - chr2.2:58242527-58242546 MS.gene02078:CDS 30.0%
TGTCTTATATTTAGTACCAG+AGG - chr2.2:58244373-58244392 MS.gene02078:intron 30.0%
TTCATTTCCCTATGAATCTA+CGG + chr2.2:58243886-58243905 None:intergenic 30.0%
TTTCCCTTAAATTAGAGAGA+AGG + chr2.2:58242927-58242946 None:intergenic 30.0%
! AAGTTTTTGTCCAATGTATC+AGG + chr2.2:58244668-58244687 None:intergenic 30.0%
! CATTGCTTAATAAGTTGACA+AGG - chr2.2:58243837-58243856 MS.gene02078:intron 30.0%
! CTATAGCGTTTAAAGTCTTA+CGG - chr2.2:58242275-58242294 MS.gene02078:CDS 30.0%
! TAACTATTGGATTAGAGAAG+GGG - chr2.2:58244202-58244221 MS.gene02078:intron 30.0%
!! TTGTCTTGATTTTTCAGATG+TGG + chr2.2:58242468-58242487 None:intergenic 30.0%
!!! AGTTCTGGAAGAAAACATTT+TGG + chr2.2:58244796-58244815 None:intergenic 30.0%
AAAATGAAGCCTAATGAGAC+TGG + chr2.2:58242332-58242351 None:intergenic 35.0%
AAAGCTGTTGACAATGCTAA+TGG + chr2.2:58244765-58244784 None:intergenic 35.0%
ACTAACAATATACGTAGGGT+TGG - chr2.2:58242637-58242656 MS.gene02078:intron 35.0%
CCAAATATCAACTCCTTAAG+AGG - chr2.2:58243096-58243115 MS.gene02078:intron 35.0%
GGTAATATTGATGTGCTTAC+TGG - chr2.2:58244839-58244858 MS.gene02078:CDS 35.0%
TATTTCCAGTTCCATTCTGA+GGG + chr2.2:58244619-58244638 None:intergenic 35.0%
TCAGCACAAGAAACTCTATT+AGG + chr2.2:58243168-58243187 None:intergenic 35.0%
TGCTGATATTCTTACACTTG+CGG - chr2.2:58243182-58243201 MS.gene02078:intron 35.0%
TGTATGTGTGTTGCAAATGT+CGG + chr2.2:58244419-58244438 None:intergenic 35.0%
TGTTGTATCAAGAGTTGGAT+CGG + chr2.2:58244570-58244589 None:intergenic 35.0%
TTATTTCCAGTTCCATTCTG+AGG + chr2.2:58244620-58244639 None:intergenic 35.0%
! ATTTCAGGTGCTCATACATT+TGG - chr2.2:58244485-58244504 MS.gene02078:intron 35.0%
! TTTCAGGTGCTCATACATTT+GGG - chr2.2:58244486-58244505 MS.gene02078:intron 35.0%
!! ATGCAATTTGGGACAAGTTT+TGG + chr2.2:58242254-58242273 None:intergenic 35.0%
!! CAAGTTTTGGCGTAAAAGTA+TGG + chr2.2:58242241-58242260 None:intergenic 35.0%
!! CCTCTTAAGGAGTTGATATT+TGG + chr2.2:58243099-58243118 None:intergenic 35.0%
!!! TGGAAGATTTTGATTGGCAA+GGG + chr2.2:58243444-58243463 None:intergenic 35.0%
AAGTCGATCTAGACTGAAGT+TGG + chr2.2:58243471-58243490 None:intergenic 40.0%
AAGTTGTGCATTTGAGGAGA+AGG + chr2.2:58242215-58242234 None:intergenic 40.0%
AGTCGATCTAGACTGAAGTT+GGG + chr2.2:58243470-58243489 None:intergenic 40.0%
AGTTGTGCATTTGAGGAGAA+GGG + chr2.2:58242214-58242233 None:intergenic 40.0%
ATCGATCTATTTCCACAGAC+TGG - chr2.2:58243362-58243381 MS.gene02078:intron 40.0%
CAAGAAAGGACCTAGAACAA+AGG + chr2.2:58242689-58242708 None:intergenic 40.0%
CAAGAATTGTTCTCAACACC+GGG - chr2.2:58244731-58244750 MS.gene02078:intron 40.0%
CCAAGAATTGTTCTCAACAC+CGG - chr2.2:58244730-58244749 MS.gene02078:intron 40.0%
CGTACTGAAACCTTTGTTCT+AGG - chr2.2:58242676-58242695 MS.gene02078:intron 40.0%
CTTACGGAAAGTTGCTAAGA+AGG - chr2.2:58242291-58242310 MS.gene02078:CDS 40.0%
CTTGCCAATCAAAATCTTCC+AGG - chr2.2:58243443-58243462 MS.gene02078:intron 40.0%
GATGTGCTTACTGGAAAGAA+AGG - chr2.2:58244848-58244867 MS.gene02078:CDS 40.0%
GGGACAAAGATTAATACCTC+TGG + chr2.2:58244392-58244411 None:intergenic 40.0%
GTTGTATCAAGAGTTGGATC+GGG + chr2.2:58244569-58244588 None:intergenic 40.0%
TCGATCTATTTCCACAGACT+GGG - chr2.2:58243363-58243382 MS.gene02078:intron 40.0%
! TATTGGATTAGAGAAGGGGA+GGG - chr2.2:58244206-58244225 MS.gene02078:intron 40.0%
! TGGATCAAGTTGTGCATTTG+AGG + chr2.2:58242221-58242240 None:intergenic 40.0%
!! ATATACCTGAGAGTGCTACT+AGG + chr2.2:58243532-58243551 None:intergenic 40.0%
!! TATACGTAGGGTTGGTCTAA+AGG - chr2.2:58242645-58242664 MS.gene02078:intron 40.0%
!!! CTGGAAGATTTTGATTGGCA+AGG + chr2.2:58243445-58243464 None:intergenic 40.0%
AAATCTGCCTTTGCTGCTCA+GGG - chr2.2:58243491-58243510 MS.gene02078:intron 45.0%
AACAGCGTGAGAGAAATGGT+TGG + chr2.2:58244100-58244119 None:intergenic 45.0%
ACTTCTCTTTCGGTCACTTC+TGG + chr2.2:58243913-58243932 None:intergenic 45.0%
AGAATCAATGGAGGGGGATA+TGG - chr2.2:58244943-58244962 MS.gene02078:CDS 45.0%
AGACTATCCCTTCTTCCTAG+TGG + chr2.2:58243407-58243426 None:intergenic 45.0%
AGCTGTTGCTATGACACGAA+AGG + chr2.2:58242158-58242177 None:intergenic 45.0%
ATGCTAATGGTATCTGCACC+CGG + chr2.2:58244752-58244771 None:intergenic 45.0%
CCAAAACAGCGTGAGAGAAA+TGG + chr2.2:58244104-58244123 None:intergenic 45.0%
CCAATGTATCAGGAGTCGTT+GGG + chr2.2:58244658-58244677 None:intergenic 45.0%
CCTCTACAGAATCAATGGAG+GGG - chr2.2:58244936-58244955 MS.gene02078:CDS 45.0%
CGATCTATTTCCACAGACTG+GGG - chr2.2:58243364-58243383 MS.gene02078:intron 45.0%
CTCTACAGAATCAATGGAGG+GGG - chr2.2:58244937-58244956 MS.gene02078:CDS 45.0%
CTGCACAAAAAACGCATGAG+AGG - chr2.2:58244231-58244250 MS.gene02078:intron 45.0%
CTTCTCTTTCGGTCACTTCT+GGG + chr2.2:58243912-58243931 None:intergenic 45.0%
GATATTCTTACACTTGCGGC+TGG - chr2.2:58243186-58243205 MS.gene02078:intron 45.0%
GATCTATTTCCACAGACTGG+GGG - chr2.2:58243365-58243384 MS.gene02078:intron 45.0%
GCCTCTACAGAATCAATGGA+GGG - chr2.2:58244935-58244954 MS.gene02078:CDS 45.0%
GGCTGGAATATCTTCTGTTC+TGG - chr2.2:58243203-58243222 MS.gene02078:intron 45.0%
GTGTTGCAAATGTCGGTCTA+GGG + chr2.2:58244412-58244431 None:intergenic 45.0%
TAAATCTGCCTTTGCTGCTC+AGG - chr2.2:58243490-58243509 MS.gene02078:intron 45.0%
TAATGAGACTGGCAGGCATT+CGG + chr2.2:58242321-58242340 None:intergenic 45.0%
TCCAATGTATCAGGAGTCGT+TGG + chr2.2:58244659-58244678 None:intergenic 45.0%
TCGTTGGGTCGAAATTGACA+CGG + chr2.2:58244643-58244662 None:intergenic 45.0%
TGCTGTGTAGTGGTTGTGTT+TGG - chr2.2:58242181-58242200 MS.gene02078:CDS 45.0%
TGTGGCCTCTACAGAATCAA+TGG - chr2.2:58244931-58244950 MS.gene02078:CDS 45.0%
TGTGTAGTGGTTGTGTTTGG+AGG - chr2.2:58242184-58242203 MS.gene02078:CDS 45.0%
TGTGTTGCAAATGTCGGTCT+AGG + chr2.2:58244413-58244432 None:intergenic 45.0%
TTCTCTTTCGGTCACTTCTG+GGG + chr2.2:58243911-58243930 None:intergenic 45.0%
! AACAGCTTTGTGCTGTGTAG+TGG - chr2.2:58242171-58242190 MS.gene02078:CDS 45.0%
! ATTGGATTAGAGAAGGGGAG+GGG - chr2.2:58244207-58244226 MS.gene02078:intron 45.0%
! CCATTTCTCTCACGCTGTTT+TGG - chr2.2:58244101-58244120 MS.gene02078:intron 45.0%
! CCGGTGTTGAGAACAATTCT+TGG + chr2.2:58244733-58244752 None:intergenic 45.0%
! CTATTGGATTAGAGAAGGGG+AGG - chr2.2:58244205-58244224 MS.gene02078:intron 45.0%
!! GGGACCTGGAAGATTTTGAT+TGG + chr2.2:58243450-58243469 None:intergenic 45.0%
!! AAAAAAAAATATATTTGTAT+AGG + chr2.2:58243255-58243274 None:intergenic 5.0%
!! AAAAAATTTATATTAGAAAA+TGG + chr2.2:58243566-58243585 None:intergenic 5.0%
!!! TACAAATATATTTTTTTTTT+TGG - chr2.2:58243256-58243275 MS.gene02078:intron 5.0%
!!! TTTAAGTTTTAATAATAATA+TGG + chr2.2:58243665-58243684 None:intergenic 5.0%
AATGAGACTGGCAGGCATTC+GGG + chr2.2:58242320-58242339 None:intergenic 50.0%
CAATGCCCTCAGAATGGAAC+TGG - chr2.2:58244611-58244630 MS.gene02078:intron 50.0%
CCCAACGACTCCTGATACAT+TGG - chr2.2:58244655-58244674 MS.gene02078:intron 50.0%
CGAAACCAATGCCCTCAGAA+TGG - chr2.2:58244605-58244624 MS.gene02078:intron 50.0%
GAATGCCTGCCAGTCTCATT+AGG - chr2.2:58242320-58242339 MS.gene02078:CDS 50.0%
GGAGGTTCCACTAGGAAGAA+GGG - chr2.2:58243397-58243416 MS.gene02078:intron 50.0%
GGCCTCTACAGAATCAATGG+AGG - chr2.2:58244934-58244953 MS.gene02078:CDS 50.0%
GTTAAGTCCCTGAGCAGCAA+AGG + chr2.2:58243501-58243520 None:intergenic 50.0%
GTTGACCTAGTAGCACTCTC+AGG - chr2.2:58243524-58243543 MS.gene02078:intron 50.0%
TCTAGACTGAAGTTGGGACC+TGG + chr2.2:58243464-58243483 None:intergenic 50.0%
TCTCTTTCGGTCACTTCTGG+GGG + chr2.2:58243910-58243929 None:intergenic 50.0%
TGAAGCCTAATGAGACTGGC+AGG + chr2.2:58242328-58242347 None:intergenic 50.0%
TGAATCGGATCTTGCCACTG+TGG - chr2.2:58244913-58244932 MS.gene02078:CDS 50.0%
TGATTCTGTAGAGGCCACAG+TGG + chr2.2:58244930-58244949 None:intergenic 50.0%
TGCTGCTCAGGGACTTAACA+CGG - chr2.2:58243502-58243521 MS.gene02078:intron 50.0%
! CAGTTCCATTCTGAGGGCAT+TGG + chr2.2:58244613-58244632 None:intergenic 50.0%
! TTGGATTAGAGAAGGGGAGG+GGG - chr2.2:58244208-58244227 MS.gene02078:intron 50.0%
!! CCCCTCCATTGATTCTGTAG+AGG + chr2.2:58244939-58244958 None:intergenic 50.0%
ATGAGACTGGCAGGCATTCG+GGG + chr2.2:58242319-58242338 None:intergenic 55.0%
GGGAGGTTCCACTAGGAAGA+AGG - chr2.2:58243396-58243415 MS.gene02078:intron 55.0%
ACAGACTGGGGGTCCAGGTT+GGG - chr2.2:58243376-58243395 MS.gene02078:intron 60.0%
CCTAGTGGAACCTCCCAACC+TGG + chr2.2:58243392-58243411 None:intergenic 60.0%
TTTCCACAGACTGGGGGTCC+AGG - chr2.2:58243371-58243390 MS.gene02078:intron 60.0%
! CCAGGTTGGGAGGTTCCACT+AGG - chr2.2:58243389-58243408 MS.gene02078:intron 60.0%
CAACCTGGACCCCCAGTCTG+TGG + chr2.2:58243377-58243396 None:intergenic 65.0%
CACAGACTGGGGGTCCAGGT+TGG - chr2.2:58243375-58243394 MS.gene02078:intron 65.0%
! GACTGGGGGTCCAGGTTGGG+AGG - chr2.2:58243379-58243398 MS.gene02078:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58242148 58244979 58242148 ID=MS.gene02078
chr2.2 mRNA 58242148 58244979 58242148 ID=MS.gene02078.t1;Parent=MS.gene02078
chr2.2 exon 58244758 58244979 58244758 ID=MS.gene02078.t1.exon1;Parent=MS.gene02078.t1
chr2.2 CDS 58244758 58244979 58244758 ID=cds.MS.gene02078.t1;Parent=MS.gene02078.t1
chr2.2 exon 58243903 58244094 58243903 ID=MS.gene02078.t1.exon2;Parent=MS.gene02078.t1
chr2.2 CDS 58243903 58244094 58243903 ID=cds.MS.gene02078.t1;Parent=MS.gene02078.t1
chr2.2 exon 58243582 58243747 58243582 ID=MS.gene02078.t1.exon3;Parent=MS.gene02078.t1
chr2.2 CDS 58243582 58243747 58243582 ID=cds.MS.gene02078.t1;Parent=MS.gene02078.t1
chr2.2 exon 58242148 58242635 58242148 ID=MS.gene02078.t1.exon4;Parent=MS.gene02078.t1
chr2.2 CDS 58242148 58242635 58242148 ID=cds.MS.gene02078.t1;Parent=MS.gene02078.t1
Gene Sequence

>MS.gene02078

ATGAACTCCTTTCGTGTCATAGCAACAGCTTTGTGCTGTGTAGTGGTTGTGTTTGGAGGACTACCCTTCTCCTCAAATGCACAACTTGATCCATACTTTTACGCCAAAACTTGTCCCAAATTGCATTCTATAGCGTTTAAAGTCTTACGGAAAGTTGCTAAGAAGGATCCCCGAATGCCTGCCAGTCTCATTAGGCTTCATTTTCATGATTGTTTCGTTCAAGTATGTTTCTATATTATATATGCTGTGCTCTAGTATTTATCATTTACCCCTCAAGTTATGTATTTGTTAGCATATTTTGAAAAATACTTTATGGTCCACATCTGAAAAATCAAGACAACTAAAAGTGCATAAGTATTTTTGTCAAAAAAAAAATGCATACGTAAACGTAACCATAAAAGGAGTTGATTAAATTCCAATTATGGGCAATACATTTCTTATGCATGTACATCCTTGTTATTATTTTTTGGCTCTTAAAAAATAACACTAACTAACAATATACGTAGGGTTGGTCTAAAGGTAAGACTACGTACTGAAACCTTTGTTCTAGGTCCTTTCTTGTTAATTTAATAATTGTCATATTTGCCAAAAATTAATAGTGTCATTGCTAGTTAATTTTCAACATAATTTTAATGGATTATATTTTATTTTACTATCTAACTGATAATATTCTCAAGTTATTATTTTTCACTAGGTATTTATGATAATGAAAATTAGTCAATGGTTTAAATGTTTAATTTAGTAAAAAATTTATTCTCTTTCTTTTATTTATAATACCTTCTCTCTAATTTAAGGGAAATGACATAATATGACAATATTTTATGATCATATGTATGTAGTTTTTGTCTTTTGGAGATAGAGCACTAAATAACTTGATATTAACAGGGTTGTGATGCATCAGTTTTGTTGAATAACACTGCAACTATTGTGAGTGAACAAGATGCTTTTCCAAATATCAACTCCTTAAGAGGATTAGATGTTATCAATCAAATTAAGACTAAAGTGGAAAAAGCTTGTCCTAATAGAGTTTCTTGTGCTGATATTCTTACACTTGCGGCTGGAATATCTTCTGTTCTGGTACATATTTTTAGTTTCAAGTATTTTCCTATACAAATATATTTTTTTTTTTGGTACAATACATATATACATTTTATTTTAATTAGTTAAGAATATTATTACTTCTTTTATTCATTGTATGATCTTAAAACAATACAATCGATCTATTTCCACAGACTGGGGGTCCAGGTTGGGAGGTTCCACTAGGAAGAAGGGATAGTCTAACAGCAAATCAATCCCTTGCCAATCAAAATCTTCCAGGTCCCAACTTCAGTCTAGATCGACTTAAATCTGCCTTTGCTGCTCAGGGACTTAACACGGTTGACCTAGTAGCACTCTCAGGTATATATATACATGCACCATTTTCTAATATAAATTTTTTATCCAACAATGATATTTAGATAATATGACACGATTTCTTTTCATAATCAAGATTTCGAATTTGAATATGATCATTACCATATTATTATTAAAACTTAAAATTGTTGAGGAGAGTTGTCACCACTTTAGACTTGATGAGTTTTTTTTTTTTTTTTTTTATAAAAAAACAGTTGATTTAGAAAATTAATTTTAAAATCAGTTGACTTTTGAATAACTTAACCAATAAAAAAGATAAATGGCATACATCAAGATCATTGCTTAATAAGTTGACAAGGACAAAAAATAATTCTCTAATTAACCGTAGATTCATAGGGAAATGAAACCCCCAGAAGTGACCGAAAGAGAAGTAAATTTTAGTCAAAAATTGTTTGACCTATGATTCGAACTCGTATTTTTTTTAAAAAAAAATTCGTAATTAGAGTTCATAAACCAGTAAAGCTCAATCATTTGATTATAAACACTTTCTCGTAAAAAAGTTATGTTACCACGTCTTTAAATATAAAATCTCATCTCCAACCATTTCTCTCACGCTGTTTTGGCCATAATTTAAATCATTTGTTTACTTTTTTTCTCTCTCTTTTGTGCTGTTTTTTTTTTCTTTTCATTTATGAGCCAATTAACTATTGGATTAGAGAAGGGGAGGGGGCTGCACAAAAAACGCATGAGAGGATCCTTAACTATTTACCATAAATAATTAGGGCACAAGTTAGCATGACCCAAATAATTAATAAATTTGCAAATTTAAAATACTATGTTTAATACAAAAGACAATAAAAATCGAAAGAGAGTGTCTTATATTTAGTACCAGAGGTATTAATCTTTGTCCCTAGACCGACATTTGCAACACACATACAAATATATAAAAGCACACGATGGTGTATGATTTACAAAACTGCTTCAATTTCAGGTGCTCATACATTTGGGAGAGCACGTTGCCTTTTCATCGTTGATCGATTATACAACTTCAACAATACTGGCAAACCCGATCCAACTCTTGATACAACATACTTAAAACAGTTGCGAAACCAATGCCCTCAGAATGGAACTGGAAATAACCGTGTCAATTTCGACCCAACGACTCCTGATACATTGGACAAAAACTTCTACAACAATCTTCAAGGTAAAAAGGGTTTGCTTCAAAGTGACCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAGCTTTGCAAATAGCCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGATGTGCTTACTGGAAAGAAAGGAGAAATTAGAAAACAATGCAATTTTATTAACAAGAAATCTTTTGAATCGGATCTTGCCACTGTGGCCTCTACAGAATCAATGGAGGGGGATATGGTCAGTTCAATCTAA
Protein sequence

>MS.gene02078.t1

MNSFRVIATALCCVVVVFGGLPFSSNAQLDPYFYAKTCPKLHSIAFKVLRKVAKKDPRMPASLIRLHFHDCFVQGCDASVLLNNTATIVSEQDAFPNINSLRGLDVINQIKTKVEKACPNRVSCADILTLAAGISSVLTGGPGWEVPLGRRDSLTANQSLANQNLPGPNFSLDRLKSAFAAQGLNTVDLVALSGAHTFGRARCLFIVDRLYNFNNTGKPDPTLDTTYLKQLRNQCPQNGTGNNRVNFDPTTPDTLDKNFYNNLQGKKGLLQSDQELFSTPGADTISIVNSFANSQNVFFQNFINSMIKMGNIDVLTGKKGEIRKQCNFINKKSFESDLATVASTESMEGDMVSSI