AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02076

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02076.t1 MTR_2g029560 96.221 344 13 0 1 344 1 344 0.0 677
MS.gene02076.t1 MTR_2g029730 84.348 345 53 1 1 344 1 345 0.0 593
MS.gene02076.t1 MTR_2g029740 68.437 339 102 1 1 334 1 339 2.28e-168 473
MS.gene02076.t1 MTR_2g029820 66.377 345 109 2 1 338 1 345 1.66e-166 468
MS.gene02076.t1 MTR_2g029800 66.377 345 109 2 1 338 1 345 5.72e-165 464
MS.gene02076.t1 MTR_2g029815 66.857 350 109 2 1 343 1 350 2.67e-164 462
MS.gene02076.t1 MTR_2g029830 71.613 310 88 0 22 331 26 335 2.61e-162 457
MS.gene02076.t1 MTR_2g029750 65.179 336 112 1 1 331 1 336 1.18e-159 451
MS.gene02076.t1 MTR_2g028980 66.055 327 111 0 9 335 14 340 8.12e-158 446
MS.gene02076.t1 MTR_2g029860 64.589 353 113 3 4 344 1 353 4.12e-157 444
MS.gene02076.t1 MTR_2g029850 63.068 352 122 2 1 344 1 352 2.07e-154 437
MS.gene02076.t1 MTR_2g029910 63.557 343 117 3 10 344 11 353 6.91e-154 436
MS.gene02076.t1 MTR_2g029830 73.384 263 70 0 69 331 5 267 6.95e-140 398
MS.gene02076.t1 MTR_7g093370 57.595 316 133 1 12 326 57 372 4.86e-124 361
MS.gene02076.t1 MTR_1g054205 53.823 327 150 1 1 326 1 327 3.28e-122 355
MS.gene02076.t1 MTR_5g021060 50.993 302 147 1 24 325 30 330 1.34e-107 318
MS.gene02076.t1 MTR_4g125940 52.769 307 141 2 22 326 26 330 1.40e-107 318
MS.gene02076.t1 MTR_8g076820 49.669 302 151 1 24 325 30 330 1.13e-104 310
MS.gene02076.t1 MTR_5g017850 51.148 305 145 3 22 325 25 326 2.58e-102 304
MS.gene02076.t1 MTR_5g017860 49.843 319 155 4 9 325 11 326 1.55e-101 302
MS.gene02076.t1 MTR_4g125940 55.072 276 120 2 53 326 2 275 3.14e-101 300
MS.gene02076.t1 MTR_2g040000 48.860 307 152 2 23 326 28 332 2.90e-99 296
MS.gene02076.t1 MTR_3g094650 50.662 302 138 4 22 321 26 318 2.00e-97 291
MS.gene02076.t1 MTR_1g022970 48.013 302 157 0 24 325 46 347 2.71e-97 292
MS.gene02076.t1 MTR_4g029200 47.869 305 150 2 21 325 43 338 1.29e-96 290
MS.gene02076.t1 MTR_5g074970 45.872 327 164 5 3 325 9 326 1.57e-96 289
MS.gene02076.t1 MTR_5g074760 47.302 315 155 5 14 325 15 321 1.27e-95 287
MS.gene02076.t1 MTR_5g074740 47.302 315 155 5 14 325 15 321 2.19e-95 286
MS.gene02076.t1 MTR_4g122640 46.689 302 158 2 24 325 38 336 4.80e-95 286
MS.gene02076.t1 MTR_2g084080 45.342 322 167 2 4 325 5 317 6.16e-95 285
MS.gene02076.t1 MTR_4g029190 48.208 307 147 4 22 325 43 340 1.70e-94 285
MS.gene02076.t1 MTR_2g084110 48.525 305 146 3 22 325 23 317 4.96e-94 283
MS.gene02076.t1 MTR_5g074860 47.712 306 149 4 22 324 27 324 6.14e-94 283
MS.gene02076.t1 MTR_5g049280 44.720 322 169 4 10 325 19 337 1.19e-93 282
MS.gene02076.t1 MTR_5g083860 46.440 323 160 5 7 325 12 325 1.26e-93 282
MS.gene02076.t1 MTR_7g072510 47.039 304 152 2 22 325 18 312 1.83e-93 281
MS.gene02076.t1 MTR_3g466200 46.372 317 158 5 12 325 13 320 2.42e-93 281
MS.gene02076.t1 MTR_5g014100 46.452 310 162 2 20 325 22 331 3.92e-93 281
MS.gene02076.t1 MTR_5g074710 46.984 315 156 5 14 325 15 321 5.06e-93 280
MS.gene02076.t1 MTR_4g029170 46.708 319 157 5 10 325 13 321 5.23e-93 280
MS.gene02076.t1 MTR_2g084090 46.885 305 152 3 22 325 23 318 5.72e-93 280
MS.gene02076.t1 MTR_3g072190 46.205 303 154 2 23 325 25 318 8.36e-93 280
MS.gene02076.t1 MTR_4g083710 49.511 307 145 4 22 325 25 324 3.04e-92 278
MS.gene02076.t1 MTR_3g094670 47.095 327 158 5 1 321 1 318 2.70e-91 276
MS.gene02076.t1 MTR_2g084010 44.785 326 171 3 1 325 1 318 4.08e-91 275
MS.gene02076.t1 MTR_7g072480 46.711 304 153 2 22 325 22 316 6.38e-91 275
MS.gene02076.t1 MTR_4g029180 48.333 300 144 4 28 325 31 321 1.62e-90 274
MS.gene02076.t1 MTR_2g084020 44.479 326 172 3 1 325 1 318 2.79e-90 273
MS.gene02076.t1 MTR_3g094630 47.468 316 155 4 12 325 16 322 4.89e-89 270
MS.gene02076.t1 MTR_1g115900 43.354 316 167 5 13 326 17 322 1.62e-86 264
MS.gene02076.t1 MTR_7g026990 43.692 325 164 6 6 326 14 323 9.39e-86 262
MS.gene02076.t1 MTR_4g074995 47.231 307 139 4 22 325 22 308 2.22e-85 260
MS.gene02076.t1 MTR_2g084000 44.079 304 162 3 22 325 24 319 4.26e-85 260
MS.gene02076.t1 MTR_3g466180 43.810 315 167 3 11 325 19 323 2.25e-84 258
MS.gene02076.t1 MTR_3g467600 44.625 307 160 3 22 325 25 324 1.08e-83 256
MS.gene02076.t1 MTR_4g046713 41.896 327 185 5 1 325 3 326 2.33e-83 256
MS.gene02076.t1 MTR_4g133800 43.960 298 156 6 29 325 46 333 2.57e-82 253
MS.gene02076.t1 MTR_2g029880 60.664 211 71 3 136 344 9 209 4.06e-82 248
MS.gene02076.t1 MTR_2g088770 41.796 323 181 6 5 325 8 325 8.87e-82 252
MS.gene02076.t1 MTR_2g008710 45.033 302 155 5 28 325 31 325 3.09e-81 250
MS.gene02076.t1 MTR_4g030890 42.763 304 169 3 22 325 98 396 6.89e-81 252
MS.gene02076.t1 MTR_4g031140 42.763 304 167 4 24 326 28 325 7.82e-80 247
MS.gene02076.t1 MTR_4g074990 42.378 328 163 3 1 325 1 305 8.02e-80 246
MS.gene02076.t1 MTR_4g114210 43.366 309 163 6 22 325 19 320 1.25e-79 246
MS.gene02076.t1 MTR_5g022870 42.574 303 164 7 24 325 23 316 3.37e-79 245
MS.gene02076.t1 MTR_1g101830 39.077 325 192 4 1 325 4 322 1.41e-78 243
MS.gene02076.t1 MTR_6g043280 41.846 325 169 7 10 325 19 332 1.46e-78 244
MS.gene02076.t1 MTR_2g437770 43.092 304 161 6 24 326 50 342 6.10e-78 243
MS.gene02076.t1 MTR_1g086320 40.303 330 186 4 5 325 6 333 5.03e-77 240
MS.gene02076.t1 MTR_3g092990 40.065 307 181 2 21 326 23 327 1.36e-76 238
MS.gene02076.t1 MTR_1g038680 41.914 303 168 5 28 325 33 332 1.52e-76 238
MS.gene02076.t1 MTR_1g077000 41.391 302 164 5 24 325 39 327 6.98e-76 236
MS.gene02076.t1 MTR_7g107520 41.250 320 181 5 6 325 8 320 1.53e-75 236
MS.gene02076.t1 MTR_1g086490 40.476 336 182 5 6 325 7 340 1.76e-75 236
MS.gene02076.t1 MTR_8g075100 41.584 303 167 7 24 325 26 319 3.09e-75 234
MS.gene02076.t1 MTR_1g025980 41.254 303 169 6 24 325 24 318 5.80e-75 234
MS.gene02076.t1 MTR_3g072190 44.788 259 134 2 67 325 2 251 2.89e-74 230
MS.gene02076.t1 MTR_6g043240 42.073 328 165 8 10 326 19 332 1.57e-73 231
MS.gene02076.t1 MTR_0155s0040 38.750 320 182 6 6 325 10 315 9.57e-73 228
MS.gene02076.t1 MTR_7g086820 39.869 306 175 5 20 325 16 312 1.68e-72 228
MS.gene02076.t1 MTR_5g074860 41.830 306 128 5 22 324 27 285 1.92e-72 226
MS.gene02076.t1 MTR_4g074980 42.105 304 144 4 22 325 23 294 2.15e-72 226
MS.gene02076.t1 MTR_5g016010 38.182 330 196 5 1 324 1 328 3.31e-70 222
MS.gene02076.t1 MTR_4g074980 47.257 237 116 2 22 255 23 253 3.73e-70 219
MS.gene02076.t1 MTR_7g029030 40.122 329 181 7 4 325 1 320 5.05e-70 221
MS.gene02076.t1 MTR_6g027440 40.683 322 183 5 4 325 1 314 1.46e-69 220
MS.gene02076.t1 MTR_6g043460 42.333 300 160 6 24 321 36 324 5.99e-69 219
MS.gene02076.t1 MTR_4g132490 39.016 305 179 4 23 325 28 327 6.04e-69 219
MS.gene02076.t1 MTR_2g008160 42.122 311 164 9 22 325 22 323 7.34e-69 218
MS.gene02076.t1 MTR_1g009750 39.458 332 190 7 1 325 1 328 3.10e-68 217
MS.gene02076.t1 MTR_1g090760 38.111 307 185 4 22 325 26 330 1.30e-67 216
MS.gene02076.t1 MTR_4g087965 38.361 305 181 5 23 322 41 343 1.38e-66 213
MS.gene02076.t1 MTR_3g092990 37.785 307 177 3 21 326 23 316 4.14e-64 206
MS.gene02076.t1 MTR_4g127670 39.073 302 176 4 23 321 23 319 1.58e-63 205
MS.gene02076.t1 MTR_4g095450 37.879 330 192 5 1 324 1 323 1.78e-63 204
MS.gene02076.t1 MTR_7g086870 37.377 305 179 5 22 326 20 312 2.11e-62 201
MS.gene02076.t1 MTR_2g008730 45.306 245 126 4 85 325 61 301 4.21e-62 200
MS.gene02076.t1 MTR_8g062780 34.906 318 203 3 10 325 9 324 4.46e-62 201
MS.gene02076.t1 MTR_3g105790 39.934 303 172 4 22 321 23 318 4.91e-62 201
MS.gene02076.t1 MTR_2g099175 37.338 308 181 5 23 325 35 335 7.66e-61 198
MS.gene02076.t1 MTR_5g033470 36.774 310 187 6 22 325 71 377 2.76e-59 195
MS.gene02076.t1 MTR_1g009750 36.970 330 184 8 1 325 1 311 1.19e-58 192
MS.gene02076.t1 MTR_0286s0010 37.013 308 185 7 22 325 32 334 5.43e-58 191
MS.gene02076.t1 MTR_6g008075 37.013 308 185 7 22 325 32 334 5.43e-58 191
MS.gene02076.t1 MTR_2g067440 33.634 333 187 6 22 324 58 386 2.08e-55 186
MS.gene02076.t1 MTR_2g008160 37.621 311 143 9 22 325 22 288 1.15e-54 181
MS.gene02076.t1 MTR_2g078610 34.835 333 182 7 22 322 74 403 1.16e-54 184
MS.gene02076.t1 MTR_1g066710 33.762 311 195 4 20 327 23 325 1.69e-54 181
MS.gene02076.t1 MTR_2g077990 34.835 333 182 7 22 322 74 403 2.59e-54 183
MS.gene02076.t1 MTR_1g066380 34.084 311 194 4 20 327 23 325 1.12e-53 179
MS.gene02076.t1 MTR_1g066640 34.405 311 193 4 20 327 23 325 1.33e-52 176
MS.gene02076.t1 MTR_1g066680 34.405 311 192 5 20 327 23 324 4.36e-52 175
MS.gene02076.t1 MTR_0147s0010 32.087 321 182 3 24 324 77 381 2.48e-51 175
MS.gene02076.t1 MTR_2g078280 34.472 322 176 7 22 311 74 392 2.57e-49 170
MS.gene02076.t1 MTR_5g074700 42.241 232 109 6 97 325 5 214 7.63e-49 163
MS.gene02076.t1 MTR_2g067450 35.505 307 188 7 22 324 9 309 1.11e-48 166
MS.gene02076.t1 MTR_2g008160 47.024 168 85 3 22 189 22 185 6.73e-46 155
MS.gene02076.t1 MTR_3g105790 40.756 238 135 3 91 325 12 246 1.20e-45 156
MS.gene02076.t1 MTR_3g072210 43.229 192 100 3 135 325 55 238 2.20e-45 155
MS.gene02076.t1 MTR_4g132110 32.558 301 192 4 28 325 36 328 4.21e-44 154
MS.gene02076.t1 MTR_1g066380 34.601 263 161 4 68 327 3 257 4.60e-44 152
MS.gene02076.t1 MTR_4g132110 32.026 306 192 5 28 325 36 333 8.46e-42 149
MS.gene02076.t1 MTR_7g072490 37.600 250 93 4 70 319 2 188 1.78e-39 139
MS.gene02076.t1 MTR_3g072260 47.328 131 62 1 11 134 6 136 1.21e-32 119
MS.gene02076.t1 MTR_5g058120 41.104 163 83 4 159 321 6 155 9.44e-29 112
MS.gene02076.t1 MTR_2g029930 57.000 100 15 3 22 107 17 102 1.08e-25 99.4
MS.gene02076.t1 MTR_2g078560 29.204 226 127 4 130 324 96 319 5.13e-25 103
MS.gene02076.t1 MTR_7g086790 31.383 188 107 4 71 258 17 182 2.79e-22 93.2
MS.gene02076.t1 MTR_2g077980 27.698 278 153 10 86 322 11 281 2.69e-21 92.4
MS.gene02076.t1 MTR_1g089005 40.336 119 64 2 24 136 15 132 1.01e-20 87.8
MS.gene02076.t1 MTR_3g462850 35.862 145 84 4 188 326 9 150 1.58e-20 87.0
MS.gene02076.t1 MTR_1g098320 46.591 88 45 1 244 331 45 130 6.89e-20 85.1
MS.gene02076.t1 MTR_4g114220 48.750 80 31 2 51 130 30 99 3.48e-18 80.5
MS.gene02076.t1 MTR_6g048160 53.521 71 29 2 63 133 22 88 6.20e-18 78.2
MS.gene02076.t1 MTR_5g074770 40.206 97 57 1 228 324 13 108 1.69e-16 74.7
MS.gene02076.t1 MTR_4g031040 30.286 175 78 3 83 257 1 131 2.03e-15 72.8
MS.gene02076.t1 MTR_4g012865 47.059 68 36 0 28 95 81 148 7.07e-13 65.9
MS.gene02076.t1 MTR_7g086810 30.894 123 59 1 20 142 2 98 1.44e-12 67.0
MS.gene02076.t1 MTR_7g086785 36.842 76 47 1 67 142 1 75 7.78e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02076.t1 AT5G06720 57.321 321 137 0 6 326 14 334 1.22e-131 379
MS.gene02076.t1 AT5G06730 56.231 329 144 0 6 334 15 343 1.59e-131 380
MS.gene02076.t1 AT2G38380 55.828 326 141 2 3 325 8 333 5.76e-129 373
MS.gene02076.t1 AT4G08770 55.949 311 135 2 21 329 21 331 3.92e-126 365
MS.gene02076.t1 AT3G32980 57.321 321 133 3 12 328 17 337 1.12e-125 365
MS.gene02076.t1 AT3G49120 56.386 321 136 3 12 328 18 338 1.37e-125 364
MS.gene02076.t1 AT2G38390 54.601 326 145 2 3 325 8 333 3.15e-123 358
MS.gene02076.t1 AT3G49110 55.864 324 138 3 7 328 19 339 2.25e-122 356
MS.gene02076.t1 AT4G08780 54.341 311 140 2 21 329 21 331 4.26e-122 355
MS.gene02076.t1 AT2G18140 50.993 302 147 1 24 325 35 335 2.35e-106 315
MS.gene02076.t1 AT5G19890 50.765 327 152 5 1 325 8 327 2.09e-105 312
MS.gene02076.t1 AT2G18150 50.000 300 149 1 26 325 38 336 4.30e-105 311
MS.gene02076.t1 AT4G36430 47.335 319 166 2 9 326 14 331 1.43e-103 308
MS.gene02076.t1 AT5G66390 47.771 314 162 2 12 325 22 333 3.49e-103 306
MS.gene02076.t1 AT1G44970 50.164 305 152 0 21 325 42 346 2.52e-102 305
MS.gene02076.t1 AT5G19880 50.814 307 148 2 22 325 23 329 4.86e-102 303
MS.gene02076.t1 AT1G49570 48.867 309 153 3 18 323 42 348 6.87e-100 299
MS.gene02076.t1 AT3G50990 47.386 306 160 1 22 327 39 343 7.45e-99 296
MS.gene02076.t1 AT1G14550 48.525 305 149 3 22 325 24 321 8.53e-96 287
MS.gene02076.t1 AT5G05340 47.386 306 150 4 22 325 28 324 3.78e-94 283
MS.gene02076.t1 AT1G14540 46.273 322 166 2 4 325 1 315 7.54e-92 277
MS.gene02076.t1 AT1G68850 46.624 311 152 8 24 325 30 335 2.22e-90 274
MS.gene02076.t1 AT4G16270 45.215 303 161 4 24 325 50 348 6.40e-90 273
MS.gene02076.t1 AT2G35380 48.344 302 152 3 28 325 34 335 1.58e-89 272
MS.gene02076.t1 AT5G58390 46.462 325 160 6 6 325 1 316 1.16e-88 269
MS.gene02076.t1 AT5G58400 44.062 320 167 5 9 325 15 325 2.52e-85 261
MS.gene02076.t1 AT3G03670 42.902 317 178 2 9 325 8 321 1.35e-84 259
MS.gene02076.t1 AT2G22420 42.020 307 163 5 24 325 23 319 5.23e-81 250
MS.gene02076.t1 AT2G41480 41.692 331 180 6 1 325 5 328 5.54e-80 247
MS.gene02076.t1 AT1G71695 44.156 308 160 6 24 328 44 342 6.57e-80 248
MS.gene02076.t1 AT5G51890 38.318 321 191 5 6 325 8 322 1.34e-78 243
MS.gene02076.t1 AT4G11290 41.033 329 184 6 4 325 1 326 6.86e-78 242
MS.gene02076.t1 AT5G64120 42.202 327 170 8 9 325 11 328 1.51e-77 241
MS.gene02076.t1 AT5G15180 40.984 305 170 5 24 325 32 329 1.62e-77 241
MS.gene02076.t1 AT3G01190 41.121 321 181 6 6 325 8 321 4.09e-77 239
MS.gene02076.t1 AT5G17820 40.850 306 169 5 20 325 20 313 5.26e-77 239
MS.gene02076.t1 AT4G25980 41.066 319 177 5 12 325 14 326 2.07e-76 238
MS.gene02076.t1 AT5G42180 41.722 302 167 6 24 324 23 316 4.35e-76 237
MS.gene02076.t1 AT5G17820 40.850 306 169 5 20 325 73 366 1.75e-75 237
MS.gene02076.t1 AT1G05260 40.062 322 187 5 7 326 9 326 7.01e-75 234
MS.gene02076.t1 AT4G37530 42.671 307 171 3 22 325 25 329 9.94e-75 234
MS.gene02076.t1 AT3G21770 41.100 309 176 5 16 322 21 325 2.80e-74 233
MS.gene02076.t1 AT5G39580 44.000 300 157 7 28 325 29 319 4.92e-73 229
MS.gene02076.t1 AT4G33420 41.009 317 168 7 15 325 22 325 2.13e-72 228
MS.gene02076.t1 AT4G33420 41.009 317 168 7 15 325 69 372 1.01e-71 228
MS.gene02076.t1 AT2G18980 40.498 321 180 5 9 325 10 323 2.35e-71 225
MS.gene02076.t1 AT1G30870 40.850 306 168 6 24 326 51 346 6.03e-71 225
MS.gene02076.t1 AT1G05240 39.344 305 177 5 24 325 26 325 2.39e-69 220
MS.gene02076.t1 AT1G05250 39.344 305 177 5 24 325 26 325 2.39e-69 220
MS.gene02076.t1 AT5G64100 42.525 301 160 7 28 325 41 331 2.48e-68 218
MS.gene02076.t1 AT4G30170 39.610 308 175 5 22 325 25 325 7.58e-68 216
MS.gene02076.t1 AT4G33870 35.629 334 177 5 24 322 68 398 7.78e-68 218
MS.gene02076.t1 AT4G31760 38.462 325 181 5 13 325 9 326 1.18e-67 216
MS.gene02076.t1 AT5G64110 41.528 301 165 6 28 325 38 330 5.18e-67 214
MS.gene02076.t1 AT5G14130 39.032 310 174 7 22 325 30 330 7.47e-67 214
MS.gene02076.t1 AT2G35380 46.964 247 127 3 83 325 1 247 8.13e-67 211
MS.gene02076.t1 AT4G37520 39.414 307 181 3 22 325 25 329 1.09e-66 213
MS.gene02076.t1 AT5G14130 39.032 310 174 7 22 325 71 371 1.77e-66 214
MS.gene02076.t1 AT3G49960 37.461 323 197 3 6 325 9 329 3.14e-66 212
MS.gene02076.t1 AT3G28200 37.987 308 177 5 22 325 19 316 1.11e-65 210
MS.gene02076.t1 AT5G40150 38.462 312 183 4 16 325 24 328 2.33e-65 209
MS.gene02076.t1 AT4G37520 39.088 307 179 4 22 325 25 326 4.10e-65 209
MS.gene02076.t1 AT4G37530 44.314 255 139 2 22 273 25 279 4.25e-65 207
MS.gene02076.t1 AT5G24070 41.489 282 152 6 51 327 64 337 1.07e-64 208
MS.gene02076.t1 AT2G24800 40.260 308 173 5 22 325 29 329 1.52e-64 207
MS.gene02076.t1 AT5G67400 40.584 308 176 5 22 325 25 329 1.71e-64 207
MS.gene02076.t1 AT2G34060 38.636 308 180 6 21 322 39 343 2.02e-64 208
MS.gene02076.t1 AT4G26010 36.957 322 187 6 5 325 3 309 4.53e-64 206
MS.gene02076.t1 AT4G26010 38.050 318 177 7 11 325 37 337 7.68e-64 206
MS.gene02076.t1 AT1G77100 39.628 323 177 8 11 325 7 319 1.94e-63 204
MS.gene02076.t1 AT2G39040 39.228 311 178 7 22 325 44 350 4.51e-63 204
MS.gene02076.t1 AT2G43480 41.429 280 151 6 51 325 64 335 4.22e-62 201
MS.gene02076.t1 AT5G22410 36.129 310 184 8 18 322 22 322 3.75e-61 199
MS.gene02076.t1 AT1G24110 34.528 307 194 5 22 325 20 322 4.93e-59 193
MS.gene02076.t1 AT1G34510 36.392 316 185 6 11 325 9 309 7.86e-59 192
MS.gene02076.t1 AT5G47000 33.754 317 200 5 12 325 21 330 1.31e-58 192
MS.gene02076.t1 AT4G17690 35.738 305 185 5 24 325 26 322 2.64e-56 186
MS.gene02076.t1 AT3G17070 33.131 329 204 7 7 325 17 339 1.20e-53 180
MS.gene02076.t1 AT2G37130 33.121 314 198 5 16 325 22 327 7.68e-49 167
MS.gene02076.t1 AT4G25980 45.604 182 95 3 12 193 59 236 3.84e-47 161
MS.gene02076.t1 AT2G37130 33.444 302 189 5 28 325 3 296 5.27e-47 161
MS.gene02076.t1 AT4G21960 31.751 337 212 6 1 327 1 329 8.88e-47 161
MS.gene02076.t1 AT3G17070 31.786 280 178 7 52 325 4 276 4.59e-40 142
MS.gene02076.t1 AT5G39580 45.614 171 88 3 28 198 29 194 7.61e-39 138
MS.gene02076.t1 AT2G24800 43.023 172 94 1 22 193 29 196 9.14e-35 127
MS.gene02076.t1 AT1G77490 25.651 269 150 11 58 309 106 341 1.32e-14 74.7
MS.gene02076.t1 AT1G77490 25.651 269 150 11 58 309 106 341 1.76e-14 74.3
MS.gene02076.t1 AT3G42570 29.787 141 86 4 53 191 20 149 3.61e-12 63.9

Find 71 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGTGTCCATGATTAAAA+TGG 0.262108 2.2:-58257088 MS.gene02076:CDS
AAGTTGATCCAATGAGAAAA+AGG 0.270141 2.2:+58258136 None:intergenic
AATGAGACTGGCACCAATTC+GGG 0.277255 2.2:+58259980 None:intergenic
CCTCTTAATGAGTTTATGTT+TGG 0.284231 2.2:+58259269 None:intergenic
CACTTTGAAGTAAGCCTTTG+TGG 0.319319 2.2:+58257199 None:intergenic
GCAGATTCCTCTGGATTATC+TGG 0.328156 2.2:-58257003 MS.gene02076:CDS
AGGGAACAATCTCACCAATT+TGG 0.328836 2.2:-58257274 MS.gene02076:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2.2:+58260023 None:intergenic
CTGGTGATCAAGGGGAAATT+AGG 0.335959 2.2:-58257047 MS.gene02076:CDS
GCCTTTGTGGCTTTGAAGAT+TGG 0.338713 2.2:+58257212 None:intergenic
CATAAACTCATTAAGAGGTT+TGG 0.346112 2.2:-58259264 MS.gene02076:CDS
CGTGCAATATGTCCTCAAAA+TGG 0.347157 2.2:-58257300 MS.gene02076:CDS
CATTAAGACTGCGCACAAAA+AGG 0.373316 2.2:+58260106 None:intergenic
CAAATTGATTTGGTGTAGTA+AGG 0.382467 2.2:+58257250 None:intergenic
ATGGGTTCCATGAATGTACT+AGG 0.387048 2.2:-58260134 MS.gene02076:CDS
AAAGCTGCATTTCTTGTTCA+AGG 0.391405 2.2:-58258113 MS.gene02076:CDS
CCAAACATAAACTCATTAAG+AGG 0.391730 2.2:-58259269 MS.gene02076:CDS
ATGATTAAAATGGCTAATAT+TGG 0.393103 2.2:-58257078 MS.gene02076:CDS
TGGTGTAGTAAGGTCCAAAT+TGG 0.395414 2.2:+58257260 None:intergenic
TGCATAGGTGCTCATACGTT+TGG 0.398741 2.2:-58257420 MS.gene02076:intron
TCCCTCACTGATCCCCGAAT+TGG 0.403147 2.2:-58259993 MS.gene02076:CDS
TTTATTAATGCAGATTCCTC+TGG 0.406967 2.2:-58257012 MS.gene02076:CDS
GAATTGGTGCCAGTCTCATT+AGG 0.407331 2.2:-58259977 MS.gene02076:CDS
GCTAATATTGGTGTACTAAC+TGG 0.408331 2.2:-58257066 MS.gene02076:CDS
ATATGTCCTCAAAATGGAAC+AGG 0.412174 2.2:-58257294 MS.gene02076:CDS
GGCAAATTCCATTGGGAAGA+AGG 0.414683 2.2:-58258208 MS.gene02076:CDS
AATTTGTTGTCAAATTGATT+TGG 0.417521 2.2:+58257240 None:intergenic
TAATGAGACTGGCACCAATT+CGG 0.418061 2.2:+58259979 None:intergenic
ATAGCAATGGTATCTGCATT+AGG 0.425991 2.2:+58257156 None:intergenic
GGTATAGAAATGGACATGTT+TGG 0.432530 2.2:+58260045 None:intergenic
TTATACAATTTCAATAGCAC+TGG 0.440155 2.2:-58257366 MS.gene02076:CDS
GGCCACCCCTAGTACATTCA+TGG 0.444356 2.2:+58260127 None:intergenic
AACACAATAGGGTATAGAAA+TGG 0.446200 2.2:+58260035 None:intergenic
ATATGACTCTAAACACAATA+GGG 0.454551 2.2:+58260024 None:intergenic
GGTGTACTAACTGGTGATCA+AGG 0.458052 2.2:-58257057 MS.gene02076:CDS
ATACTTGAACAAAGCAATCA+TGG 0.458644 2.2:+58259946 None:intergenic
GTTGTGTTTAGAGTTTGATC+AGG 0.458651 2.2:+58257339 None:intergenic
TGCGCAGTCTTAATGCATGC+TGG 0.462901 2.2:-58260098 MS.gene02076:CDS
CCCTCATGGCAAATTCCATT+GGG 0.466184 2.2:-58258215 MS.gene02076:CDS
TCCCTCATGGCAAATTCCAT+TGG 0.478606 2.2:-58258216 MS.gene02076:CDS
AGCTCAAGTAGCTTCTGTTC+TGG 0.481365 2.2:-58259162 MS.gene02076:intron
ACAGATTTAGTTACACTCTC+AGG 0.505239 2.2:-58258080 MS.gene02076:intron
CCCAATGGAATTTGCCATGA+GGG 0.510090 2.2:+58258215 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2.2:-58260018 MS.gene02076:CDS
CATGTTTGGCTGTAAAATGA+AGG 0.525454 2.2:+58260059 None:intergenic
AATTCTCAAAGAAGAGAGGT+TGG 0.527401 2.2:+58257112 None:intergenic
GTGTACTAACTGGTGATCAA+GGG 0.539547 2.2:-58257056 MS.gene02076:CDS
TTGGTTTATGAACAGGGAGG+AGG 0.539593 2.2:-58258239 MS.gene02076:intron
AAACTATCCCTTCTTCCCAA+TGG 0.540488 2.2:+58258200 None:intergenic
AAGCTGCATTTCTTGTTCAA+GGG 0.544571 2.2:-58258112 MS.gene02076:CDS
TTCCATGAATGTACTAGGGG+TGG 0.544977 2.2:-58260129 MS.gene02076:CDS
TGGGTTCCATGAATGTACTA+GGG 0.550297 2.2:-58260133 MS.gene02076:CDS
GCAAATTCCATTGGGAAGAA+GGG 0.554150 2.2:-58258207 MS.gene02076:CDS
GAAATGAAGCCTAATGAGAC+TGG 0.563857 2.2:+58259968 None:intergenic
ACCAATTCGGGGATCAGTGA+GGG 0.574096 2.2:+58259992 None:intergenic
TGTTTGTGACAGGGTTGCGA+TGG 0.579435 2.2:-58259344 MS.gene02076:intron
CTAAAATTCTCAAAGAAGAG+AGG 0.579859 2.2:+58257108 None:intergenic
TCAGCACAAGAAACAGTGGC+TGG 0.593952 2.2:+58259200 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2.2:-58258229 MS.gene02076:intron
AAAGCTATTAACAATAGCAA+TGG 0.599480 2.2:+58257143 None:intergenic
GCGCAGTCTTAATGCATGCT+GGG 0.607286 2.2:-58260097 MS.gene02076:CDS
TCCAATCTTCAAAGCCACAA+AGG 0.630443 2.2:-58257213 MS.gene02076:CDS
ATGAGACTGGCACCAATTCG+GGG 0.640565 2.2:+58259981 None:intergenic
GATTCCTCTGGATTATCTGG+TGG 0.641989 2.2:-58257000 MS.gene02076:CDS
TGTACTAACTGGTGATCAAG+GGG 0.649642 2.2:-58257055 MS.gene02076:CDS
AATATCAGCACAAGAAACAG+TGG 0.657026 2.2:+58259196 None:intergenic
CACCAATTCGGGGATCAGTG+AGG 0.657501 2.2:+58259991 None:intergenic
GGGTTCCATGAATGTACTAG+GGG 0.674090 2.2:-58260132 MS.gene02076:CDS
TCCCAATGGAATTTGCCATG+AGG 0.679713 2.2:+58258214 None:intergenic
TATGTCCTCAAAATGGAACA+GGG 0.723062 2.2:-58257293 MS.gene02076:CDS
TGCACCACCAGATAATCCAG+AGG 0.739615 2.2:+58256996 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAATATAAATAATTTGTT+TGG - chr2.2:58258462-58258481 MS.gene02076:intron 10.0%
!!! ATTATTTTTAGTATATATGT+AGG + chr2.2:58258335-58258354 None:intergenic 10.0%
!!! TTTTTTTTTTTAAAAATAGC+AGG - chr2.2:58258039-58258058 MS.gene02076:intron 10.0%
!! AATATTATGTAACATATATG+TGG - chr2.2:58259634-58259653 MS.gene02076:intron 15.0%
!! AATTTGAAGATAATTTACAT+CGG + chr2.2:58259260-58259279 None:intergenic 15.0%
!! TAAACTAGTAACTAATATAT+TGG - chr2.2:58258842-58258861 MS.gene02076:intron 15.0%
!! TATACAAAAGTTAAAATTTC+AGG + chr2.2:58259660-58259679 None:intergenic 15.0%
!! TTAATCATAACTGATATAAA+AGG + chr2.2:58259341-58259360 None:intergenic 15.0%
!!! AAAAATGTTTGTTTTTACAA+TGG - chr2.2:58259371-58259390 MS.gene02076:intron 15.0%
!!! AAATAAAAATCGATTTACAT+TGG + chr2.2:58259403-58259422 None:intergenic 15.0%
!!! AACTTTTTATTAAACTTTGT+TGG + chr2.2:58259486-58259505 None:intergenic 15.0%
!!! AGTTTTATAGTGATAATTTT+GGG - chr2.2:58258215-58258234 MS.gene02076:CDS 15.0%
!!! TAGTTTTATAGTGATAATTT+TGG - chr2.2:58258214-58258233 MS.gene02076:CDS 15.0%
!!! TTTTTTTTTTGATACAATGT+TGG + chr2.2:58259455-58259474 None:intergenic 15.0%
!! AGAAATCATGATCTATATAT+AGG + chr2.2:58257221-58257240 None:intergenic 20.0%
!! AGAATACAGAAAAATAAAAG+TGG + chr2.2:58258791-58258810 None:intergenic 20.0%
!! ATGATTAAAATGGCTAATAT+TGG - chr2.2:58260022-58260041 MS.gene02076:CDS 20.0%
!! GAATACAGAAAAATAAAAGT+GGG + chr2.2:58258790-58258809 None:intergenic 20.0%
!! GTAATCAATGAATTAATATC+TGG - chr2.2:58258067-58258086 MS.gene02076:intron 20.0%
!! TAATTAATGTTCTTAGAGAA+TGG + chr2.2:58258100-58258119 None:intergenic 20.0%
!!! AAATTAAAGTGGATTGTATT+AGG + chr2.2:58257261-58257280 None:intergenic 20.0%
!!! AAGCTTTTCTATTAAATTGT+TGG + chr2.2:58259073-58259092 None:intergenic 20.0%
!!! AAGTTTTTATCTACTTAATG+TGG + chr2.2:58258609-58258628 None:intergenic 20.0%
!!! AATATATTGGTTTATGAACA+GGG - chr2.2:58258855-58258874 MS.gene02076:intron 20.0%
!!! AATATTAGCCATTTTAATCA+TGG + chr2.2:58260023-58260042 None:intergenic 20.0%
!!! AATTTGTTGTCAAATTGATT+TGG + chr2.2:58259863-58259882 None:intergenic 20.0%
!!! AGAATTTTGGTTATTATTGA+CGG - chr2.2:58257296-58257315 MS.gene02076:CDS 20.0%
!!! AGTTTTTATCTACTTAATGT+GGG + chr2.2:58258608-58258627 None:intergenic 20.0%
!!! ATTTTATTGTTTTCTTTTGC+TGG - chr2.2:58258182-58258201 MS.gene02076:CDS 20.0%
!!! ATTTTTTTTTTTTGACGAAC+AGG - chr2.2:58258300-58258319 MS.gene02076:intron 20.0%
!!! CGATTTTTATTTTTGTACAA+CGG - chr2.2:58259411-58259430 MS.gene02076:intron 20.0%
!!! TAATATATTGGTTTATGAAC+AGG - chr2.2:58258854-58258873 MS.gene02076:intron 20.0%
!!! TATTAGTTACTAGTTTAAGA+TGG + chr2.2:58258839-58258858 None:intergenic 20.0%
!!! TTTAACTTTTGTATATGCAT+AGG - chr2.2:58259665-58259684 MS.gene02076:intron 20.0%
!!! TTTTATCTATATAACTAGCT+AGG + chr2.2:58258002-58258021 None:intergenic 20.0%
!!! TTTTATTGTTTTCTTTTGCT+GGG - chr2.2:58258183-58258202 MS.gene02076:CDS 20.0%
!!! TTTTTGTATGTTTTGTTTTC+AGG + chr2.2:58258422-58258441 None:intergenic 20.0%
! AAAGCTATTAACAATAGCAA+TGG + chr2.2:58259960-58259979 None:intergenic 25.0%
! AATAACCAAAATTCTTGTAG+TGG + chr2.2:58257291-58257310 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2.2:58257080-58257099 None:intergenic 25.0%
! ATATGACTCTAAACACAATA+GGG + chr2.2:58257079-58257098 None:intergenic 25.0%
! TAAGACTTAAACCAATAGTA+AGG + chr2.2:58258697-58258716 None:intergenic 25.0%
! TACAATAAGAGAATCTACAT+CGG + chr2.2:58259205-58259224 None:intergenic 25.0%
! TTATACAATTTCAATAGCAC+TGG - chr2.2:58259734-58259753 MS.gene02076:intron 25.0%
!! AAATCGATTTACATTGGTTA+AGG + chr2.2:58259397-58259416 None:intergenic 25.0%
!! ATTGTGTTACTGAAAAAACA+TGG - chr2.2:58257619-58257638 MS.gene02076:intron 25.0%
!! CATAGATTTTTGTCTTTTAG+TGG - chr2.2:58257688-58257707 MS.gene02076:intron 25.0%
!! TATATAGGAAGAGCTTTATA+TGG + chr2.2:58257206-58257225 None:intergenic 25.0%
!!! ACTATTGGTTTAAGTCTTAA+CGG - chr2.2:58258698-58258717 MS.gene02076:intron 25.0%
!!! ATTAGCTTTAGTCAAACAAA+AGG + chr2.2:58258519-58258538 None:intergenic 25.0%
AACACAATAGGGTATAGAAA+TGG + chr2.2:58257068-58257087 None:intergenic 30.0%
ACAATAAGAGAATCTACATC+GGG + chr2.2:58259204-58259223 None:intergenic 30.0%
ACATGCATAAACAACAACTT+TGG + chr2.2:58257739-58257758 None:intergenic 30.0%
AGTTGATCCAATGAGAAAAA+GGG + chr2.2:58258966-58258985 None:intergenic 30.0%
ATACTTGAACAAAGCAATCA+TGG + chr2.2:58257157-58257176 None:intergenic 30.0%
ATCTGATGAAGAATTACTGA+GGG - chr2.2:58257454-58257473 MS.gene02076:intron 30.0%
ATGATACTTGAAACTACTAC+TGG - chr2.2:58258147-58258166 MS.gene02076:CDS 30.0%
CATAAACTCATTAAGAGGTT+TGG - chr2.2:58257836-58257855 MS.gene02076:intron 30.0%
CCAAACATAAACTCATTAAG+AGG - chr2.2:58257831-58257850 MS.gene02076:intron 30.0%
CCTCTTAATGAGTTTATGTT+TGG + chr2.2:58257834-58257853 None:intergenic 30.0%
CTAAAATTCTCAAAGAAGAG+AGG + chr2.2:58259995-58260014 None:intergenic 30.0%
GATTCTCTTATTGTAGAATG+TGG - chr2.2:58259210-58259229 MS.gene02076:CDS 30.0%
GTGGTTCATTCAAATTAAAG+TGG + chr2.2:58257272-58257291 None:intergenic 30.0%
GTTCAACTCAAATACTAATC+CGG + chr2.2:58258671-58258690 None:intergenic 30.0%
TGCTCACTAAAATAATTGAC+AGG - chr2.2:58258271-58258290 MS.gene02076:intron 30.0%
TTCATGTGCACTACATTAAT+TGG + chr2.2:58257559-58257578 None:intergenic 30.0%
TTTATTAATGCAGATTCCTC+TGG - chr2.2:58260088-58260107 MS.gene02076:CDS 30.0%
TTTCCTTCAGTAATTACTGA+CGG - chr2.2:58257480-58257499 MS.gene02076:intron 30.0%
! AAGTTGATCCAATGAGAAAA+AGG + chr2.2:58258967-58258986 None:intergenic 30.0%
! ATGAACCACTACAAGAATTT+TGG - chr2.2:58257283-58257302 MS.gene02076:CDS 30.0%
! TAGAGTGTCCATGATTAAAA+TGG - chr2.2:58260012-58260031 MS.gene02076:CDS 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2.2:58257082-58257101 MS.gene02076:CDS 30.0%
!! CAAATTGATTTGGTGTAGTA+AGG + chr2.2:58259853-58259872 None:intergenic 30.0%
!! GCTAATGTTGAACTTGTTAA+AGG - chr2.2:58258533-58258552 MS.gene02076:intron 30.0%
!!! GGTTTAAGTTTTAACTTTCG+TGG + chr2.2:58258748-58258767 None:intergenic 30.0%
!!! TTCTTGTTTTACGATACTGA+CGG + chr2.2:58257530-58257549 None:intergenic 30.0%
AAAGCTGCATTTCTTGTTCA+AGG - chr2.2:58258987-58259006 MS.gene02076:intron 35.0%
AAGCTGCATTTCTTGTTCAA+GGG - chr2.2:58258988-58259007 MS.gene02076:intron 35.0%
AATATCAGCACAAGAAACAG+TGG + chr2.2:58257907-58257926 None:intergenic 35.0%
AATTCTCAAAGAAGAGAGGT+TGG + chr2.2:58259991-58260010 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2.2:58259020-58259039 MS.gene02076:intron 35.0%
AGTTGAACTCTCCTTACTAT+TGG - chr2.2:58258683-58258702 MS.gene02076:intron 35.0%
ATAGCAATGGTATCTGCATT+AGG + chr2.2:58259947-58259966 None:intergenic 35.0%
ATATGTCCTCAAAATGGAAC+AGG - chr2.2:58259806-58259825 MS.gene02076:intron 35.0%
ATTCCGTCAGTAATTACTGA+AGG + chr2.2:58257486-58257505 None:intergenic 35.0%
CAAAAGGTTCAACATTAGCT+AGG + chr2.2:58258503-58258522 None:intergenic 35.0%
CATGTTTGGCTGTAAAATGA+AGG + chr2.2:58257044-58257063 None:intergenic 35.0%
CCAGTAATGTGTATTACTGA+GGG + chr2.2:58257349-58257368 None:intergenic 35.0%
GACGTCAATAAAGTTACTGA+CGG - chr2.2:58257404-58257423 MS.gene02076:CDS 35.0%
GATCTGATGAAGAATTACTG+AGG - chr2.2:58257453-58257472 MS.gene02076:intron 35.0%
GCTAATATTGGTGTACTAAC+TGG - chr2.2:58260034-58260053 MS.gene02076:CDS 35.0%
GGTATAGAAATGGACATGTT+TGG + chr2.2:58257058-58257077 None:intergenic 35.0%
GTCAGTAACTTTATTGACGT+CGG + chr2.2:58257405-58257424 None:intergenic 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2.2:58257747-58257766 MS.gene02076:intron 35.0%
TAGCTAAAATTGAACCCCAT+TGG - chr2.2:58258363-58258382 MS.gene02076:intron 35.0%
TATGTCCTCAAAATGGAACA+GGG - chr2.2:58259807-58259826 MS.gene02076:intron 35.0%
TCAAATACTAATCCGGTAGA+TGG + chr2.2:58258664-58258683 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2.2:58257746-58257765 MS.gene02076:intron 35.0%
TTGATCTGATCAAAGCCAAT+GGG + chr2.2:58258381-58258400 None:intergenic 35.0%
TTGGTTTAAGTCTTAACGGT+TGG - chr2.2:58258702-58258721 MS.gene02076:intron 35.0%
! GTTGTGTTTAGAGTTTGATC+AGG + chr2.2:58259764-58259783 None:intergenic 35.0%
!! AAAGTGGATTGTATTAGGTC+TGG + chr2.2:58257256-58257275 None:intergenic 35.0%
!! AGTGATAATTTTGGGTAACG+AGG - chr2.2:58258223-58258242 MS.gene02076:CDS 35.0%
!! ATATTGGTTTATGAACAGGG+AGG - chr2.2:58258858-58258877 MS.gene02076:intron 35.0%
!!! ACTGACGGATTTTTCTATAC+CGG + chr2.2:58257515-58257534 None:intergenic 35.0%
!!! TGGAAGGTTTTGATTTGCAA+GGG + chr2.2:58258940-58258959 None:intergenic 35.0%
AAACTATCCCTTCTTCCCAA+TGG + chr2.2:58258903-58258922 None:intergenic 40.0%
AGGGAACAATCTCACCAATT+TGG - chr2.2:58259826-58259845 MS.gene02076:intron 40.0%
ATCACTCACTCCATTACTGA+GGG + chr2.2:58257436-58257455 None:intergenic 40.0%
ATGGGTTCCATGAATGTACT+AGG - chr2.2:58256966-58256985 MS.gene02076:CDS 40.0%
ATTAGACACTTTCTTGTCCC+TGG - chr2.2:58259277-58259296 MS.gene02076:CDS 40.0%
CATTAAGACTGCGCACAAAA+AGG + chr2.2:58256997-58257016 None:intergenic 40.0%
CCCTCAGTAATACACATTAC+TGG - chr2.2:58257346-58257365 MS.gene02076:CDS 40.0%
CGTGCAATATGTCCTCAAAA+TGG - chr2.2:58259800-58259819 MS.gene02076:intron 40.0%
GAAATGAAGCCTAATGAGAC+TGG + chr2.2:58257135-58257154 None:intergenic 40.0%
GCAAATTCCATTGGGAAGAA+GGG - chr2.2:58258893-58258912 MS.gene02076:intron 40.0%
GCCAGTAATGTGTATTACTG+AGG + chr2.2:58257350-58257369 None:intergenic 40.0%
GTGTACTAACTGGTGATCAA+GGG - chr2.2:58260044-58260063 MS.gene02076:CDS 40.0%
GTTGATCTGATCAAAGCCAA+TGG + chr2.2:58258382-58258401 None:intergenic 40.0%
TAATGAGACTGGCACCAATT+CGG + chr2.2:58257124-58257143 None:intergenic 40.0%
TCCAATCTTCAAAGCCACAA+AGG - chr2.2:58259887-58259906 MS.gene02076:intron 40.0%
TGATCTGATCAAAGCCAATG+GGG + chr2.2:58258380-58258399 None:intergenic 40.0%
TGGATATGTTGTACGTGAGA+AGG + chr2.2:58258819-58258838 None:intergenic 40.0%
TGGGTTCCATGAATGTACTA+GGG - chr2.2:58256967-58256986 MS.gene02076:CDS 40.0%
TGGTGTAGTAAGGTCCAAAT+TGG + chr2.2:58259843-58259862 None:intergenic 40.0%
TGTACTAACTGGTGATCAAG+GGG - chr2.2:58260045-58260064 MS.gene02076:CDS 40.0%
TTAGACACTTTCTTGTCCCT+GGG - chr2.2:58259278-58259297 MS.gene02076:CDS 40.0%
! ACGGAATTTTCCCTCAGTAA+TGG - chr2.2:58257423-58257442 MS.gene02076:intron 40.0%
! ACTTTCAATTTTCCAGCGTC+GGG + chr2.2:58259316-58259335 None:intergenic 40.0%
! CACTTTCAATTTTCCAGCGT+CGG + chr2.2:58259317-58259336 None:intergenic 40.0%
! TTGTTCCCTGTTCCATTTTG+AGG + chr2.2:58259815-58259834 None:intergenic 40.0%
!! AACTTGTTAAAGGAGCGTCT+AGG - chr2.2:58258543-58258562 MS.gene02076:intron 40.0%
!! CACTTTGAAGTAAGCCTTTG+TGG + chr2.2:58259904-58259923 None:intergenic 40.0%
!!! CTGGAAGGTTTTGATTTGCA+AGG + chr2.2:58258941-58258960 None:intergenic 40.0%
AATGAGACTGGCACCAATTC+GGG + chr2.2:58257123-58257142 None:intergenic 45.0%
AGCTCAAGTAGCTTCTGTTC+TGG - chr2.2:58257938-58257957 MS.gene02076:intron 45.0%
CCCAATGGAATTTGCCATGA+GGG + chr2.2:58258888-58258907 None:intergenic 45.0%
CCCTCATGGCAAATTCCATT+GGG - chr2.2:58258885-58258904 MS.gene02076:intron 45.0%
CTGGTGATCAAGGGGAAATT+AGG - chr2.2:58260053-58260072 MS.gene02076:CDS 45.0%
GATCACTCACTCCATTACTG+AGG + chr2.2:58257437-58257456 None:intergenic 45.0%
GATTCCTCTGGATTATCTGG+TGG - chr2.2:58260100-58260119 MS.gene02076:CDS 45.0%
GCAGATTCCTCTGGATTATC+TGG - chr2.2:58260097-58260116 MS.gene02076:CDS 45.0%
GGCAAATTCCATTGGGAAGA+AGG - chr2.2:58258892-58258911 MS.gene02076:intron 45.0%
GGCATACAAGTCTTAACTGC+TGG + chr2.2:58258769-58258788 None:intergenic 45.0%
GGGTTCCATGAATGTACTAG+GGG - chr2.2:58256968-58256987 MS.gene02076:CDS 45.0%
GGTGTACTAACTGGTGATCA+AGG - chr2.2:58260043-58260062 MS.gene02076:CDS 45.0%
TAGACACTTTCTTGTCCCTG+GGG - chr2.2:58259279-58259298 MS.gene02076:CDS 45.0%
TCCCAATGGAATTTGCCATG+AGG + chr2.2:58258889-58258908 None:intergenic 45.0%
TCCCTCATGGCAAATTCCAT+TGG - chr2.2:58258884-58258903 MS.gene02076:intron 45.0%
TGCATAGGTGCTCATACGTT+TGG - chr2.2:58259680-58259699 MS.gene02076:intron 45.0%
TTCCATGAATGTACTAGGGG+TGG - chr2.2:58256971-58256990 MS.gene02076:CDS 45.0%
TTGGTTTATGAACAGGGAGG+AGG - chr2.2:58258861-58258880 MS.gene02076:intron 45.0%
! CTTTCAATTTTCCAGCGTCG+GGG + chr2.2:58259315-58259334 None:intergenic 45.0%
! TCCAATGAGAAAAAGGGTGC+TGG + chr2.2:58258960-58258979 None:intergenic 45.0%
! TCCAGCACCCTTTTTCTCAT+TGG - chr2.2:58258956-58258975 MS.gene02076:intron 45.0%
!! AAAGGAGCGTCTAGGATTCA+TGG - chr2.2:58258551-58258570 MS.gene02076:intron 45.0%
!! ATGAGAAAAAGGGTGCTGGA+AGG + chr2.2:58258956-58258975 None:intergenic 45.0%
!! GAATTGGTGCCAGTCTCATT+AGG - chr2.2:58257123-58257142 MS.gene02076:CDS 45.0%
!! GACGGATTTTTCTATACCGG+CGG + chr2.2:58257512-58257531 None:intergenic 45.0%
!! GCCTTTGTGGCTTTGAAGAT+TGG + chr2.2:58259891-58259910 None:intergenic 45.0%
!!! GGTTTTGATTTGCAAGGGCT+TGG + chr2.2:58258935-58258954 None:intergenic 45.0%
ACCAATTCGGGGATCAGTGA+GGG + chr2.2:58257111-58257130 None:intergenic 50.0%
ATGAGACTGGCACCAATTCG+GGG + chr2.2:58257122-58257141 None:intergenic 50.0%
CGTGAGACTCTTCCATCTAC+CGG - chr2.2:58258649-58258668 MS.gene02076:intron 50.0%
GCGCAGTCTTAATGCATGCT+GGG - chr2.2:58257003-58257022 MS.gene02076:CDS 50.0%
TCAGCACAAGAAACAGTGGC+TGG + chr2.2:58257903-58257922 None:intergenic 50.0%
TGCACCACCAGATAATCCAG+AGG + chr2.2:58260107-58260126 None:intergenic 50.0%
TGCGCAGTCTTAATGCATGC+TGG - chr2.2:58257002-58257021 MS.gene02076:CDS 50.0%
TGTTTGTGACAGGGTTGCGA+TGG - chr2.2:58257756-58257775 MS.gene02076:intron 50.0%
TTACTGACGGAATAGTCCGC+CGG - chr2.2:58257493-58257512 MS.gene02076:intron 50.0%
CACCAATTCGGGGATCAGTG+AGG + chr2.2:58257112-58257131 None:intergenic 55.0%
CGGGGTGAAAAATGACCCCA+GGG + chr2.2:58259297-58259316 None:intergenic 55.0%
GGCCACCCCTAGTACATTCA+TGG + chr2.2:58256976-58256995 None:intergenic 55.0%
TCCCTCACTGATCCCCGAAT+TGG - chr2.2:58257107-58257126 MS.gene02076:CDS 55.0%
TCGGGGTGAAAAATGACCCC+AGG + chr2.2:58259298-58259317 None:intergenic 55.0%
!!! GTCATTTTTCACCCCGACGC+TGG - chr2.2:58259301-58259320 MS.gene02076:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2.2:58258871-58258890 MS.gene02076:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58256966 58260156 58256966 ID=MS.gene02076
chr2.2 mRNA 58256966 58260156 58256966 ID=MS.gene02076.t1;Parent=MS.gene02076
chr2.2 exon 58259950 58260156 58259950 ID=MS.gene02076.t1.exon1;Parent=MS.gene02076.t1
chr2.2 CDS 58259950 58260156 58259950 ID=cds.MS.gene02076.t1;Parent=MS.gene02076.t1
chr2.2 exon 58259163 58259354 58259163 ID=MS.gene02076.t1.exon2;Parent=MS.gene02076.t1
chr2.2 CDS 58259163 58259354 58259163 ID=cds.MS.gene02076.t1;Parent=MS.gene02076.t1
chr2.2 exon 58258081 58258246 58258081 ID=MS.gene02076.t1.exon3;Parent=MS.gene02076.t1
chr2.2 CDS 58258081 58258246 58258081 ID=cds.MS.gene02076.t1;Parent=MS.gene02076.t1
chr2.2 exon 58256966 58257435 58256966 ID=MS.gene02076.t1.exon4;Parent=MS.gene02076.t1
chr2.2 CDS 58256966 58257435 58256966 ID=cds.MS.gene02076.t1;Parent=MS.gene02076.t1
Gene Sequence

>MS.gene02076

ATGGGTTCCATGAATGTACTAGGGGTGGCCTTTTTGTGCGCAGTCTTAATGCATGCTGGGTATGCTCAGCTTAATCCTTCATTTTACAGCCAAACATGTCCATTTCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATTGGTGCCAGTCTCATTAGGCTTCATTTCCATGATTGCTTTGTTCAAGTATGTTATTGTTAATTACTTTTTGTTCATCCATATAAAGCTCTTCCTATATATAGATCATGATTTCTAATTTTCTTATACCAGACCTAATACAATCCACTTTAATTTGAATGAACCACTACAAGAATTTTGGTTATTATTGACGGAATTAATCTCTCAGTAATGAATCAAATCCCTCAGTAATACACATTACTGGCTAATCGTTGACAAAAAAATTCTCTCAGTAATACCGACGTCAATAAAGTTACTGACGGAATTTTCCCTCAGTAATGGAGTGAGTGATCTGATGAAGAATTACTGAGGGATTTTTCCTTCAGTAATTACTGACGGAATAGTCCGCCGGTATAGAAAAATCCGTCAGTATCGTAAAACAAGAAATTCAACCAATTAATGTAGTGCACATGAACACTACAATGTAAATTTTTGTTTTTAGTTAAAATTTTAAAATTGTGTTACTGAAAAAACATGGTGTTGAAAAAGTTTGTAACAAAGATCTTTCTTTAAAGTAGTGTTTGCATAGATTTTTGTCTTTTAGTGGTAAAGACACAAATGAAAATCTTATACCAAAGTTGTTGTTTATGCATGTTTGTGACAGGGTTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACATAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAAATGAATGTCCAGCCACTGTTTCTTGTGCTGATATTCTTACTATTGCAGCTCAAGTAGCTTCTGTTCTGGTATGTTTTATCATTAATTTCATCAACTTTTTTTAATTACCTAGCTAGTTATATAGATAAAATAATTACAAATATTTAATTTTTTTTTTTAAAAATAGCAGGAGCTAGTAATCAATGAATTAATATCTGGAAAATTTCCATTCTCTAAGAACATTAATTAATGTATATAGTTAATTATCAATCATACATGATACTTGAAACTACTACTGGCAATATGAAATAATTTTATTGTTTTCTTTTGCTGGGTGAATTTTTAGTTTTATAGTGATAATTTTGGGTAACGAGGAATAGTTTGACTAATTAATCTATTTTGCTCACTAAAATAATTGACAGGATCTCAATTTTTTTTTTTTGACGAACAGGATACTTGATCCTACATATATACTAAAAATAATGAATGTCATAGCTAAAATTGAACCCCATTGGCTTTGATCAGATCAACAAATGAGCAAAAGTTGACCTGAAAACAAAACATACAAAAAAGAAGTATAGTTGATCATCAACTAATATAAATAATTTGTTTGGACTCTAATAATCACGCCTAGCTAATGTTGAACCTTTTGTTTGACTAAAGCTAATGTTGAACTTGTTAAAGGAGCGTCTAGGATTCATGGTGTTCTAAGTTTAAATATGTTAAGCTAAATTCCCACATTAAGTAGATAAAAACTTTTAATATGATAAAATTAAGTCGTGAGACTCTTCCATCTACCGGATTAGTATTTGAGTTGAACTCTCCTTACTATTGGTTTAAGTCTTAACGGTTGGTCATTTTATTGAGAATTGAACCACGAAAGTTAAAACTTAAACCAGCAGTTAAGACTTGTATGCCCACTTTTATTTTTCTGTATTCTTTTTTCCTTCTCACGTACAACATATCCATCTTAAACTAGTAACTAATATATTGGTTTATGAACAGGGAGGAGGTCCCTCATGGCAAATTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACCAAGCCCTTGCAAATCAAAACCTTCCAGCACCCTTTTTCTCATTGGATCAACTTAAAGCTGCATTTCTTGTTCAAGGGCTCAACACTACAGATTTAGTTACACTCTCAGGTATTGAATATAATCATTTTCATACTTACCAACAATTTAATAGAAAAGCTTTACGCATGACATCAAATCATATATTATGATGTCGCAATTCACTATACACTAGTAATACATAATGACTTTTTACACTAGCTAAAATTGAATTTTTAAATCGATTTTGAACCCGATGTAGATTCTCTTATTGTAGAATGTGGTCACGTTTTACATCAATTATTCAACCGATGTAAATTATCTTCAAATTAGACACTTTCTTGTCCCTGGGGTCATTTTTCACCCCGACGCTGGAAAATTGAAAGTGACCTTTTATATCAGTTATGATTAAAATCGATGCGAAAAATGTTTGTTTTTACAATGGCCTTAACCAATGTAAATCGATTTTTATTTTTGTACAACGGTTATAGTAAAAATGTTCACCAACATTGTATCAAAAAAAAAAAATGTTCACCAACAAAGTTTAATAAAAAGTTTACACATTATATCAAATCATATAAATAATAATGTCACACATTCACTAAACATTTGCACAATTATCTATACACGATGTCTATGTAAAACTAATTTACATTGTAATAAATATTGTAATTAAACTCGTAGAAATATTATGTAACATATATGTGGCCTGAAATTTTAACTTTTGTATATGCATAGGTGCTCATACGTTTGGAAGAGCTAAGTGTAGCACATTCATTGATCGTTTATACAATTTCAATAGCACTGGAAATCCTGATCAAACTCTAAACACAACTTACTTACAAACATTGCGTGCAATATGTCCTCAAAATGGAACAGGGAACAATCTCACCAATTTGGACCTTACTACACCAAATCAATTTGACAACAAATTTTACTCCAATCTTCAAAGCCACAAAGGCTTACTTCAAAGTGATCAAGAGCTATTCTCAACTCCTAATGCAGATACCATTGCTATTGTTAATAGCTTTAGTAGTAACCAACCTCTCTTCTTTGAGAATTTTAGAGTGTCCATGATTAAAATGGCTAATATTGGTGTACTAACTGGTGATCAAGGGGAAATTAGGTTGCAATGTAATTTTATTAATGCAGATTCCTCTGGATTATCTGGTGGTGCATCAAAAGATGAACTTTTAAGCTCATTCTAA
Protein sequence

>MS.gene02076.t1

MGSMNVLGVAFLCAVLMHAGYAQLNPSFYSQTCPFLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNINSLRGLDVVNQIKTAVENECPATVSCADILTIAAQVASVLGGGPSWQIPLGRRDSLTANQALANQNLPAPFFSLDQLKAAFLVQGLNTTDLVTLSGAHTFGRAKCSTFIDRLYNFNSTGNPDQTLNTTYLQTLRAICPQNGTGNNLTNLDLTTPNQFDNKFYSNLQSHKGLLQSDQELFSTPNADTIAIVNSFSSNQPLFFENFRVSMIKMANIGVLTGDQGEIRLQCNFINADSSGLSGGASKDELLSSF