Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09768.t1 | XP_003611325.1 | 99.2 | 246 | 2 | 0 | 1 | 246 | 1 | 246 | 8.80E-127 | 463 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09768.t1 | P21653 | 82.7 | 249 | 42 | 1 | 1 | 248 | 1 | 249 | 1.4e-109 | 397.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09768.t1 | G7JXC6 | 99.2 | 246 | 2 | 0 | 1 | 246 | 1 | 246 | 6.3e-127 | 463.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene09768 | -0.855942 | 4.49E-62 | -1.69E-46 |
| MS.gene050133 | MS.gene09768 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene09768 | 0.82934 | 5.44E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene09768 | -0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene09768 | -0.830422 | 2.96E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene09768 | -0.806946 | 6.43E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene09768 | -0.821706 | 3.50E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene09768 | 0.829236 | 5.76E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene09768 | -0.822596 | 2.18E-53 | -1.69E-46 |
| MS.gene052223 | MS.gene09768 | 0.839803 | 1.27E-57 | -1.69E-46 |
| MS.gene05233 | MS.gene09768 | 0.811508 | 6.76E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene09768 | -0.857058 | 2.11E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene09768 | -0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene09768 | -0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene09768 | -0.804787 | 1.83E-49 | -1.69E-46 |
| MS.gene055595 | MS.gene09768 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene055601 | MS.gene09768 | 0.83121 | 1.90E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene09768 | -0.805632 | 1.22E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene09768 | 0.844701 | 6.42E-59 | -1.69E-46 |
| MS.gene056690 | MS.gene09768 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene056691 | MS.gene09768 | 0.823815 | 1.13E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene09768 | 0.872522 | 2.98E-67 | -1.69E-46 |
| MS.gene056924 | MS.gene09768 | 0.803865 | 2.84E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene09768 | -0.818203 | 2.22E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene09768 | -0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene09768 | 0.82322 | 1.56E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene09768 | -0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene059043 | MS.gene09768 | 0.841245 | 5.34E-58 | -1.69E-46 |
| MS.gene059285 | MS.gene09768 | -0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene09768 | -0.807702 | 4.44E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene09768 | -0.808913 | 2.45E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene09768 | -0.81171 | 6.11E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene09768 | -0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene09768 | -0.812017 | 5.24E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene09768 | 0.812221 | 4.73E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34830 | MS.gene09768 | PPI |
| MS.gene09768 | MS.gene36789 | PPI |
| MS.gene022891 | MS.gene09768 | PPI |
| MS.gene069860 | MS.gene09768 | PPI |
| MS.gene09768 | MS.gene36342 | PPI |
| MS.gene072269 | MS.gene09768 | PPI |
| MS.gene025449 | MS.gene09768 | PPI |
| MS.gene76526 | MS.gene09768 | PPI |
| MS.gene85141 | MS.gene09768 | PPI |
| MS.gene36973 | MS.gene09768 | PPI |
| MS.gene71137 | MS.gene09768 | PPI |
| MS.gene025056 | MS.gene09768 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09768.t1 | MTR_5g012810 | 99.187 | 246 | 2 | 0 | 1 | 246 | 1 | 246 | 1.32e-167 | 462 |
| MS.gene09768.t1 | MTR_8g013680 | 77.912 | 249 | 53 | 2 | 1 | 248 | 1 | 248 | 7.00e-130 | 367 |
| MS.gene09768.t1 | MTR_2g101370 | 75.820 | 244 | 58 | 1 | 4 | 246 | 5 | 248 | 5.18e-123 | 350 |
| MS.gene09768.t1 | MTR_7g103030 | 62.602 | 246 | 92 | 0 | 3 | 248 | 5 | 250 | 1.86e-90 | 267 |
| MS.gene09768.t1 | MTR_4g063090 | 62.389 | 226 | 82 | 2 | 24 | 246 | 26 | 251 | 1.10e-89 | 265 |
| MS.gene09768.t1 | MTR_1g115405 | 54.656 | 247 | 109 | 2 | 3 | 247 | 5 | 250 | 4.60e-88 | 261 |
| MS.gene09768.t1 | MTR_1g006490 | 54.393 | 239 | 104 | 3 | 1 | 238 | 1 | 235 | 1.34e-81 | 245 |
| MS.gene09768.t1 | MTR_1g077540 | 50.833 | 240 | 117 | 1 | 3 | 241 | 5 | 244 | 6.64e-79 | 238 |
| MS.gene09768.t1 | MTR_7g023350 | 54.472 | 246 | 111 | 1 | 3 | 247 | 5 | 250 | 6.16e-78 | 236 |
| MS.gene09768.t1 | MTR_1g006590 | 52.209 | 249 | 111 | 5 | 1 | 246 | 1 | 244 | 3.61e-77 | 233 |
| MS.gene09768.t1 | MTR_6g069040 | 53.333 | 240 | 111 | 1 | 3 | 241 | 5 | 244 | 2.80e-73 | 224 |
| MS.gene09768.t1 | MTR_2g060360 | 47.368 | 228 | 118 | 2 | 9 | 235 | 9 | 235 | 1.97e-67 | 209 |
| MS.gene09768.t1 | MTR_5g063930 | 38.866 | 247 | 133 | 8 | 8 | 248 | 26 | 260 | 1.78e-40 | 140 |
| MS.gene09768.t1 | MTR_2g094270 | 38.153 | 249 | 134 | 7 | 9 | 238 | 28 | 275 | 8.06e-39 | 136 |
| MS.gene09768.t1 | MTR_7g101190 | 39.301 | 229 | 122 | 5 | 19 | 231 | 39 | 266 | 4.66e-38 | 134 |
| MS.gene09768.t1 | MTR_4g059390 | 37.712 | 236 | 130 | 5 | 19 | 238 | 39 | 273 | 1.88e-36 | 130 |
| MS.gene09768.t1 | MTR_3g118010 | 39.631 | 217 | 116 | 5 | 19 | 223 | 37 | 250 | 6.09e-36 | 129 |
| MS.gene09768.t1 | MTR_3g070210 | 35.398 | 226 | 130 | 5 | 19 | 231 | 55 | 277 | 2.99e-31 | 117 |
| MS.gene09768.t1 | MTR_5g082070 | 35.841 | 226 | 129 | 5 | 19 | 231 | 55 | 277 | 1.71e-30 | 115 |
| MS.gene09768.t1 | MTR_2g094270 | 37.788 | 217 | 118 | 6 | 9 | 209 | 28 | 243 | 9.93e-30 | 112 |
| MS.gene09768.t1 | MTR_5g010150 | 37.168 | 226 | 126 | 6 | 19 | 231 | 52 | 274 | 2.26e-29 | 112 |
| MS.gene09768.t1 | MTR_8g098375 | 36.283 | 226 | 128 | 7 | 19 | 231 | 52 | 274 | 5.35e-29 | 111 |
| MS.gene09768.t1 | MTR_4g415300 | 36.889 | 225 | 127 | 6 | 19 | 231 | 56 | 277 | 6.71e-29 | 110 |
| MS.gene09768.t1 | MTR_2g017620 | 36.323 | 223 | 130 | 7 | 3 | 223 | 10 | 222 | 6.50e-28 | 107 |
| MS.gene09768.t1 | MTR_3g008920 | 36.596 | 235 | 135 | 7 | 15 | 247 | 22 | 244 | 7.94e-28 | 107 |
| MS.gene09768.t1 | MTR_2g017620 | 36.323 | 223 | 130 | 7 | 3 | 223 | 24 | 236 | 1.10e-27 | 107 |
| MS.gene09768.t1 | MTR_1g095070 | 39.548 | 177 | 94 | 4 | 67 | 231 | 25 | 200 | 1.37e-27 | 105 |
| MS.gene09768.t1 | MTR_2g017660 | 34.583 | 240 | 140 | 8 | 14 | 249 | 34 | 260 | 4.86e-27 | 105 |
| MS.gene09768.t1 | MTR_2g017590 | 34.361 | 227 | 138 | 6 | 3 | 228 | 22 | 238 | 6.42e-27 | 105 |
| MS.gene09768.t1 | MTR_4g084880 | 34.483 | 232 | 139 | 6 | 18 | 246 | 34 | 255 | 7.80e-27 | 105 |
| MS.gene09768.t1 | MTR_5g079570 | 34.025 | 241 | 140 | 7 | 14 | 248 | 35 | 262 | 3.02e-26 | 103 |
| MS.gene09768.t1 | MTR_8g087710 | 32.489 | 237 | 143 | 6 | 14 | 246 | 34 | 257 | 3.14e-26 | 103 |
| MS.gene09768.t1 | MTR_7g010650 | 34.742 | 213 | 132 | 3 | 19 | 231 | 37 | 242 | 3.76e-26 | 103 |
| MS.gene09768.t1 | MTR_4g006730 | 35.610 | 205 | 117 | 4 | 23 | 223 | 79 | 272 | 1.01e-25 | 102 |
| MS.gene09768.t1 | MTR_2g104940 | 35.749 | 207 | 114 | 5 | 23 | 223 | 84 | 277 | 1.13e-25 | 102 |
| MS.gene09768.t1 | MTR_8g087720 | 32.780 | 241 | 148 | 5 | 10 | 246 | 26 | 256 | 2.61e-25 | 100 |
| MS.gene09768.t1 | MTR_2g017610 | 32.609 | 230 | 144 | 7 | 18 | 246 | 37 | 256 | 9.67e-24 | 96.7 |
| MS.gene09768.t1 | MTR_2g017620 | 42.000 | 150 | 82 | 4 | 76 | 223 | 9 | 155 | 2.80e-23 | 93.6 |
| MS.gene09768.t1 | MTR_2g017570 | 32.174 | 230 | 145 | 7 | 18 | 246 | 37 | 256 | 2.89e-23 | 95.5 |
| MS.gene09768.t1 | MTR_3g070210 | 34.343 | 198 | 117 | 4 | 19 | 206 | 55 | 249 | 4.90e-23 | 95.1 |
| MS.gene09768.t1 | MTR_4g006730 | 34.694 | 196 | 113 | 4 | 32 | 223 | 1 | 185 | 6.84e-23 | 93.2 |
| MS.gene09768.t1 | MTR_1g070385 | 33.649 | 211 | 128 | 6 | 22 | 230 | 65 | 265 | 7.49e-23 | 97.4 |
| MS.gene09768.t1 | MTR_4g006630 | 34.694 | 196 | 113 | 4 | 32 | 223 | 1 | 185 | 9.07e-23 | 92.8 |
| MS.gene09768.t1 | MTR_1g097840 | 36.321 | 212 | 115 | 6 | 23 | 228 | 78 | 275 | 1.55e-21 | 91.3 |
| MS.gene09768.t1 | MTR_4g059390 | 35.928 | 167 | 97 | 3 | 19 | 176 | 39 | 204 | 6.48e-21 | 87.8 |
| MS.gene09768.t1 | MTR_1g095070 | 39.597 | 149 | 80 | 3 | 67 | 206 | 25 | 172 | 1.94e-20 | 86.3 |
| MS.gene09768.t1 | MTR_4g075570 | 32.129 | 249 | 137 | 8 | 11 | 237 | 43 | 281 | 9.21e-17 | 78.6 |
| MS.gene09768.t1 | MTR_3g070210 | 31.902 | 163 | 102 | 3 | 19 | 175 | 55 | 214 | 1.39e-16 | 76.3 |
| MS.gene09768.t1 | MTR_4g415300 | 34.463 | 177 | 106 | 5 | 19 | 190 | 56 | 227 | 2.43e-15 | 73.2 |
| MS.gene09768.t1 | MTR_5g010150 | 34.756 | 164 | 98 | 4 | 19 | 176 | 52 | 212 | 3.11e-15 | 72.8 |
| MS.gene09768.t1 | MTR_8g098375 | 32.335 | 167 | 104 | 4 | 19 | 179 | 52 | 215 | 4.39e-15 | 72.8 |
| MS.gene09768.t1 | MTR_4g075590 | 28.512 | 242 | 143 | 8 | 11 | 231 | 29 | 261 | 8.74e-13 | 67.0 |
| MS.gene09768.t1 | MTR_8g468730 | 39.604 | 101 | 41 | 4 | 143 | 242 | 8 | 89 | 1.06e-12 | 62.8 |
| MS.gene09768.t1 | MTR_4g006730 | 34.118 | 170 | 97 | 4 | 23 | 188 | 79 | 237 | 7.69e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09768.t1 | AT5G47450 | 79.352 | 247 | 50 | 1 | 1 | 246 | 1 | 247 | 8.70e-136 | 382 |
| MS.gene09768.t1 | AT4G17340 | 82.400 | 250 | 43 | 1 | 1 | 249 | 1 | 250 | 3.63e-132 | 373 |
| MS.gene09768.t1 | AT3G16240 | 76.230 | 244 | 57 | 1 | 1 | 243 | 1 | 244 | 4.10e-128 | 363 |
| MS.gene09768.t1 | AT3G26520 | 63.636 | 231 | 83 | 1 | 7 | 236 | 10 | 240 | 2.81e-97 | 285 |
| MS.gene09768.t1 | AT2G36830 | 61.134 | 247 | 95 | 1 | 3 | 248 | 5 | 251 | 9.24e-97 | 283 |
| MS.gene09768.t1 | AT4G01470 | 55.061 | 247 | 108 | 2 | 3 | 246 | 5 | 251 | 9.08e-87 | 258 |
| MS.gene09768.t1 | AT1G17810 | 53.200 | 250 | 111 | 2 | 5 | 248 | 10 | 259 | 1.43e-74 | 228 |
| MS.gene09768.t1 | AT1G73190 | 53.498 | 243 | 107 | 2 | 5 | 241 | 10 | 252 | 1.58e-74 | 228 |
| MS.gene09768.t1 | AT2G25810 | 53.600 | 250 | 111 | 3 | 1 | 249 | 1 | 246 | 1.61e-74 | 227 |
| MS.gene09768.t1 | AT3G47440 | 45.378 | 238 | 127 | 3 | 1 | 236 | 4 | 240 | 2.27e-64 | 201 |
| MS.gene09768.t1 | AT2G37170 | 38.956 | 249 | 131 | 9 | 9 | 238 | 68 | 314 | 7.08e-37 | 132 |
| MS.gene09768.t1 | AT2G37170 | 38.492 | 252 | 136 | 8 | 9 | 242 | 25 | 275 | 7.24e-37 | 131 |
| MS.gene09768.t1 | AT2G37180 | 37.917 | 240 | 132 | 6 | 19 | 242 | 37 | 275 | 1.64e-36 | 130 |
| MS.gene09768.t1 | AT4G35100 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 2.62e-36 | 130 |
| MS.gene09768.t1 | AT4G35100 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 2.62e-36 | 130 |
| MS.gene09768.t1 | AT5G60660 | 39.301 | 229 | 122 | 6 | 19 | 231 | 39 | 266 | 3.60e-36 | 130 |
| MS.gene09768.t1 | AT3G53420 | 39.662 | 237 | 124 | 7 | 19 | 238 | 39 | 273 | 4.33e-36 | 129 |
| MS.gene09768.t1 | AT3G53420 | 39.662 | 237 | 124 | 7 | 19 | 238 | 39 | 273 | 4.33e-36 | 129 |
| MS.gene09768.t1 | AT3G54820 | 36.145 | 249 | 133 | 7 | 19 | 243 | 38 | 284 | 1.71e-35 | 128 |
| MS.gene09768.t1 | AT2G39010 | 35.802 | 243 | 133 | 6 | 11 | 231 | 24 | 265 | 1.23e-34 | 125 |
| MS.gene09768.t1 | AT2G16850 | 39.631 | 217 | 116 | 5 | 19 | 223 | 36 | 249 | 1.12e-33 | 123 |
| MS.gene09768.t1 | AT4G00430 | 37.333 | 225 | 126 | 5 | 19 | 231 | 53 | 274 | 1.60e-30 | 115 |
| MS.gene09768.t1 | AT4G23400 | 36.889 | 225 | 127 | 5 | 19 | 231 | 53 | 274 | 2.38e-30 | 114 |
| MS.gene09768.t1 | AT3G61430 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 2.73e-30 | 114 |
| MS.gene09768.t1 | AT3G61430 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 2.73e-30 | 114 |
| MS.gene09768.t1 | AT1G01620 | 36.889 | 225 | 127 | 5 | 19 | 231 | 52 | 273 | 4.39e-30 | 114 |
| MS.gene09768.t1 | AT1G52180 | 60.674 | 89 | 35 | 0 | 123 | 211 | 34 | 122 | 9.46e-30 | 108 |
| MS.gene09768.t1 | AT2G45960 | 35.556 | 225 | 130 | 5 | 19 | 231 | 52 | 273 | 4.09e-29 | 111 |
| MS.gene09768.t1 | AT1G01620 | 39.153 | 189 | 102 | 4 | 55 | 231 | 14 | 201 | 5.06e-27 | 103 |
| MS.gene09768.t1 | AT5G37810 | 34.348 | 230 | 138 | 6 | 19 | 246 | 43 | 261 | 1.18e-26 | 104 |
| MS.gene09768.t1 | AT4G18910 | 33.745 | 243 | 143 | 7 | 12 | 246 | 45 | 277 | 2.82e-26 | 103 |
| MS.gene09768.t1 | AT4G19030 | 32.510 | 243 | 146 | 7 | 12 | 246 | 48 | 280 | 1.02e-25 | 102 |
| MS.gene09768.t1 | AT1G80760 | 33.043 | 230 | 135 | 5 | 23 | 246 | 84 | 300 | 1.61e-25 | 102 |
| MS.gene09768.t1 | AT5G37820 | 35.000 | 220 | 123 | 6 | 19 | 231 | 43 | 249 | 3.33e-25 | 100 |
| MS.gene09768.t1 | AT5G37820 | 34.025 | 241 | 135 | 8 | 14 | 246 | 73 | 297 | 4.75e-25 | 101 |
| MS.gene09768.t1 | AT3G06100 | 31.878 | 229 | 150 | 3 | 6 | 234 | 33 | 255 | 1.70e-24 | 99.0 |
| MS.gene09768.t1 | AT1G31885 | 32.653 | 245 | 141 | 5 | 5 | 232 | 20 | 257 | 2.38e-24 | 99.4 |
| MS.gene09768.t1 | AT3G06100 | 32.864 | 213 | 137 | 3 | 22 | 234 | 1 | 207 | 5.82e-23 | 93.6 |
| MS.gene09768.t1 | AT4G10380 | 33.333 | 228 | 131 | 6 | 6 | 223 | 59 | 275 | 3.14e-22 | 93.6 |
| MS.gene09768.t1 | AT1G31885 | 34.762 | 210 | 122 | 4 | 31 | 232 | 1 | 203 | 2.10e-21 | 90.5 |
| MS.gene09768.t1 | AT2G45960 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 3.04e-21 | 90.1 |
| MS.gene09768.t1 | AT2G45960 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 3.30e-21 | 90.5 |
| MS.gene09768.t1 | AT2G34390 | 33.040 | 227 | 136 | 6 | 13 | 231 | 42 | 260 | 1.92e-18 | 82.8 |
| MS.gene09768.t1 | AT2G39010 | 32.222 | 180 | 106 | 4 | 11 | 175 | 24 | 202 | 2.80e-18 | 81.3 |
| MS.gene09768.t1 | AT2G34390 | 33.486 | 218 | 129 | 6 | 22 | 231 | 9 | 218 | 1.47e-17 | 79.7 |
| MS.gene09768.t1 | AT3G06100 | 35.606 | 132 | 84 | 1 | 103 | 234 | 44 | 174 | 4.76e-16 | 74.3 |
| MS.gene09768.t1 | AT4G00430 | 34.783 | 161 | 97 | 3 | 19 | 174 | 53 | 210 | 2.93e-15 | 72.8 |
| MS.gene09768.t1 | AT4G18910 | 31.351 | 185 | 112 | 6 | 12 | 188 | 45 | 222 | 8.50e-11 | 60.5 |
Find 82 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTGGCTGGGTTGATTTA+TGG | 0.159555 | 5.1:+5976604 | MS.gene09768:CDS |
| TTGCTGATAACTGGATCTAT+TGG | 0.258320 | 5.1:+5976560 | MS.gene09768:CDS |
| TCCTAACTGGTCTCTTCTAT+TGG | 0.261693 | 5.1:+5975904 | MS.gene09768:CDS |
| ACCATTGCACCCATTGCTAT+TGG | 0.270281 | 5.1:+5976439 | MS.gene09768:CDS |
| CACAGCAGCTGACCCCAAAA+AGG | 0.277234 | 5.1:+5976405 | MS.gene09768:CDS |
| TTGAACCCAGCTGTTACTTT+TGG | 0.284387 | 5.1:+5975855 | MS.gene09768:CDS |
| TTGATAGGAGGAGGCTTGGC+TGG | 0.296199 | 5.1:+5976592 | MS.gene09768:CDS |
| GTGGAAACTTTGCTGATAAC+TGG | 0.301786 | 5.1:+5976551 | MS.gene09768:CDS |
| TTTGAGATTATCATAACATT+TGG | 0.330146 | 5.1:+5976361 | MS.gene09768:CDS |
| ATGAACCCGGCTCGCTCATT+TGG | 0.334641 | 5.1:+5976514 | MS.gene09768:CDS |
| TCAAACACTAATCCAGCAAT+AGG | 0.335099 | 5.1:-5976343 | None:intergenic |
| ATTTATGGAGACGTCTTTAT+TGG | 0.339095 | 5.1:+5976619 | MS.gene09768:CDS |
| ACCTGAGATGTTTGCTGCTA+TGG | 0.342340 | 5.1:-5975826 | None:intergenic |
| CCATTGCACCCATTGCTATT+GGG | 0.346855 | 5.1:+5976440 | MS.gene09768:CDS |
| TATTGGGTTGGACCTTTGAT+AGG | 0.351892 | 5.1:+5976577 | MS.gene09768:CDS |
| TATTGGATTGCCCAGTTGCT+TGG | 0.357623 | 5.1:+5975921 | MS.gene09768:CDS |
| TGCTGATAACTGGATCTATT+GGG | 0.375661 | 5.1:+5976561 | MS.gene09768:CDS |
| AAAATGGTGAAGATAGGTTT+TGG | 0.375817 | 5.1:+5975085 | None:intergenic |
| CATGCATTTGCACTATTTGT+TGG | 0.376412 | 5.1:+5975798 | MS.gene09768:CDS |
| TATGTTTCAGATGCTGGTGC+TGG | 0.377613 | 5.1:-5976652 | None:intergenic |
| TTTGGCCCAGCTGTGGTTAG+TGG | 0.397060 | 5.1:+5976532 | MS.gene09768:CDS |
| GCTGGTCTGAACCCTATTGC+TGG | 0.401227 | 5.1:+5976331 | MS.gene09768:CDS |
| ATTGCTATTGGGTTCGTTGT+CGG | 0.411206 | 5.1:+5976451 | MS.gene09768:CDS |
| TAAGGGTATGTTTCAGATGC+TGG | 0.414974 | 5.1:-5976658 | None:intergenic |
| CAACAATAGAGCCAAGCAAC+TGG | 0.416746 | 5.1:-5975932 | None:intergenic |
| GGCAACATCACCATCCTAAC+TGG | 0.420270 | 5.1:+5975891 | MS.gene09768:CDS |
| CTCTGATAGATAAGCCTTGA+GGG | 0.430449 | 5.1:-5975137 | None:intergenic |
| ATGTTTCAGATGCTGGTGCT+GGG | 0.433498 | 5.1:-5976651 | None:intergenic |
| CCAACCCATGGAGTGGCTGC+TGG | 0.436938 | 5.1:+5976313 | MS.gene09768:CDS |
| CTTGGATCCAGCGGGTTTAG+TGG | 0.446191 | 5.1:+5975761 | MS.gene09768:CDS |
| ACCTTTGATAGGAGGAGGCT+TGG | 0.448327 | 5.1:+5976588 | MS.gene09768:CDS |
| CTGGGCCAAATGAGCGAGCC+GGG | 0.451970 | 5.1:-5976519 | None:intergenic |
| TGATAGGAGGAGGCTTGGCT+GGG | 0.471542 | 5.1:+5976593 | MS.gene09768:CDS |
| TTCATTGAACCGCCACTGAA+TGG | 0.476993 | 5.1:-5976496 | None:intergenic |
| AAGTTTCCACTAACCACAGC+TGG | 0.477936 | 5.1:-5976538 | None:intergenic |
| GATTATCATAACATTTGGAT+TGG | 0.481301 | 5.1:+5976366 | MS.gene09768:CDS |
| GTTGGACCTTTGATAGGAGG+AGG | 0.482836 | 5.1:+5976583 | MS.gene09768:CDS |
| GCTAATCCAAAAGTAACAGC+TGG | 0.483137 | 5.1:-5975861 | None:intergenic |
| GCCATAGCAGCAAACATCTC+AGG | 0.493649 | 5.1:+5975825 | MS.gene09768:CDS |
| CAAACACTAATCCAGCAATA+GGG | 0.503864 | 5.1:-5976342 | None:intergenic |
| CACTAAACCCGCTGGATCCA+AGG | 0.511849 | 5.1:-5975760 | None:intergenic |
| ACTGCCAAAATGGTGAAGAT+AGG | 0.512012 | 5.1:+5975079 | None:intergenic |
| CCCAATAGCAATGGGTGCAA+TGG | 0.518541 | 5.1:-5976440 | None:intergenic |
| TCTAACATCAGATGCAGCCT+TGG | 0.521701 | 5.1:+5975743 | MS.gene09768:CDS |
| TCAGACCAGCAGCCACTCCA+TGG | 0.529125 | 5.1:-5976318 | None:intergenic |
| CCTTAGCGGTGACGTAATTG+AGG | 0.536114 | 5.1:-5975965 | None:intergenic |
| TTGCAGAGTGTTCCAACCCA+TGG | 0.538974 | 5.1:+5976301 | MS.gene09768:intron |
| TGGGTTGGACCTTTGATAGG+AGG | 0.539673 | 5.1:+5976580 | MS.gene09768:CDS |
| ATTTGCACTATTTGTTGGTG+TGG | 0.541154 | 5.1:+5975803 | MS.gene09768:CDS |
| GCTGGGCCAAATGAGCGAGC+CGG | 0.544362 | 5.1:-5976520 | None:intergenic |
| ACAACGAACCCAATAGCAAT+GGG | 0.546926 | 5.1:-5976448 | None:intergenic |
| CAGTGGCGGTTCAATGAACC+CGG | 0.556855 | 5.1:+5976501 | MS.gene09768:CDS |
| TGAACCGCCACTGAATGGAC+CGG | 0.558982 | 5.1:-5976491 | None:intergenic |
| TCGCTCATTTGGCCCAGCTG+TGG | 0.561854 | 5.1:+5976525 | MS.gene09768:CDS |
| TCCAATAGAAGAGACCAGTT+AGG | 0.566741 | 5.1:-5975905 | None:intergenic |
| ATTTAGCATTGCCTCCCTCA+AGG | 0.567116 | 5.1:+5975123 | MS.gene09768:CDS |
| CCAGCAGCCACTCCATGGGT+TGG | 0.575104 | 5.1:-5976313 | None:intergenic |
| AACAATAGAGCCAAGCAACT+GGG | 0.580068 | 5.1:-5975931 | None:intergenic |
| GCCAAGCCTCCTCCTATCAA+AGG | 0.583356 | 5.1:-5976589 | None:intergenic |
| GATAACTGGATCTATTGGGT+TGG | 0.583637 | 5.1:+5976565 | MS.gene09768:CDS |
| CCTCAATTACGTCACCGCTA+AGG | 0.585087 | 5.1:+5975965 | MS.gene09768:CDS |
| TGGACCGGCGGCTAAGATGT+TGG | 0.588820 | 5.1:-5976476 | None:intergenic |
| GACAACGAACCCAATAGCAA+TGG | 0.589317 | 5.1:-5976449 | None:intergenic |
| GATGCAGCCTTGGATCCAGC+GGG | 0.590239 | 5.1:+5975753 | MS.gene09768:CDS |
| GCTACTGCCACTAAACCCGC+TGG | 0.595890 | 5.1:-5975768 | None:intergenic |
| GGTGCCAACATCTTAGCCGC+CGG | 0.596161 | 5.1:+5976472 | MS.gene09768:CDS |
| GATGGTGATGTTGCCTCCAA+TGG | 0.596576 | 5.1:-5975883 | None:intergenic |
| ATAGAAGAGACCAGTTAGGA+TGG | 0.597084 | 5.1:-5975901 | None:intergenic |
| GGGTTTAGTGGCAGTAGCTG+TGG | 0.598717 | 5.1:+5975773 | MS.gene09768:CDS |
| TGTTTCAGATGCTGGTGCTG+GGG | 0.605971 | 5.1:-5976650 | None:intergenic |
| CTAATCCAAAAGTAACAGCT+GGG | 0.617109 | 5.1:-5975860 | None:intergenic |
| CAGACCAGCAGCCACTCCAT+GGG | 0.624072 | 5.1:-5976317 | None:intergenic |
| GCCGCCGGTCCATTCAGTGG+CGG | 0.641305 | 5.1:+5976487 | MS.gene09768:CDS |
| TTAGCCGCCGGTCCATTCAG+TGG | 0.641829 | 5.1:+5976484 | MS.gene09768:CDS |
| ACCGCCACTGAATGGACCGG+CGG | 0.646576 | 5.1:-5976488 | None:intergenic |
| AGATGCAGCCTTGGATCCAG+CGG | 0.648942 | 5.1:+5975752 | MS.gene09768:CDS |
| ACTCTGATAGATAAGCCTTG+AGG | 0.651261 | 5.1:-5975138 | None:intergenic |
| ATAGCAGCAAACATCTCAGG+TGG | 0.653320 | 5.1:+5975828 | MS.gene09768:CDS |
| AGTTTCCACTAACCACAGCT+GGG | 0.662001 | 5.1:-5976537 | None:intergenic |
| GAGTGTTCCAACCCATGGAG+TGG | 0.667041 | 5.1:+5976306 | MS.gene09768:intron |
| TAGCGGTGACGTAATTGAGG+AGG | 0.669128 | 5.1:-5975962 | None:intergenic |
| TGATAGATAAGCCTTGAGGG+AGG | 0.684819 | 5.1:-5975134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTATATTAATATATTATGT+TGG | + | chr5.1:5976270-5976289 | MS.gene09768:intron | 10.0% |
| !! | AAAATTATTCAAGAAATAAG+TGG | + | chr5.1:5975293-5975312 | MS.gene09768:intron | 15.0% |
| !! | AAATGTTTGAAAAATGATAA+CGG | + | chr5.1:5975517-5975536 | MS.gene09768:intron | 15.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | + | chr5.1:5975996-5976015 | MS.gene09768:intron | 15.0% |
| !! | AAATTGTTTCAATTGAGATT+TGG | - | chr5.1:5976076-5976095 | None:intergenic | 20.0% |
| !! | ACTTCAATAAATTCCAATAT+TGG | + | chr5.1:5975619-5975638 | MS.gene09768:intron | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | + | chr5.1:5976361-5976380 | MS.gene09768:CDS | 20.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | chr5.1:5975644-5975663 | MS.gene09768:intron | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | + | chr5.1:5976366-5976385 | MS.gene09768:CDS | 25.0% |
| ! | TTACTTGAGACAAAATTTGA+AGG | + | chr5.1:5975565-5975584 | MS.gene09768:intron | 25.0% |
| !! | AGCTTATATTTTGCCAATAT+TGG | - | chr5.1:5975635-5975654 | None:intergenic | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | - | chr5.1:5975982-5976001 | None:intergenic | 25.0% |
| !! | TCTATGAGATTTTCGTAAAT+TGG | - | chr5.1:5975342-5975361 | None:intergenic | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | + | chr5.1:5976002-5976021 | MS.gene09768:intron | 25.0% |
| ACTATTGGTACAAATGTAGA+AGG | + | chr5.1:5975683-5975702 | MS.gene09768:intron | 30.0% | |
| ATTTATGGAGACGTCTTTAT+TGG | + | chr5.1:5976619-5976638 | MS.gene09768:CDS | 30.0% | |
| GTAGAAGGAATGATGAAATA+TGG | + | chr5.1:5975698-5975717 | MS.gene09768:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | chr5.1:5975668-5975687 | MS.gene09768:intron | 30.0% | |
| TTAGTTGAACTCCTGAATAT+CGG | + | chr5.1:5976119-5976138 | MS.gene09768:intron | 30.0% | |
| !!! | TACATAATTTTAGGTTCAGG+TGG | + | chr5.1:5976005-5976024 | MS.gene09768:intron | 30.0% |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | - | chr5.1:5976154-5976173 | None:intergenic | 30.0% |
| ATAAGCTTACATCAGATGGT+TGG | + | chr5.1:5975648-5975667 | MS.gene09768:intron | 35.0% | |
| CAAACACTAATCCAGCAATA+GGG | - | chr5.1:5976345-5976364 | None:intergenic | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | + | chr5.1:5975798-5975817 | MS.gene09768:CDS | 35.0% | |
| CTAATCCAAAAGTAACAGCT+GGG | - | chr5.1:5975863-5975882 | None:intergenic | 35.0% | |
| TAGTTGAACTCCTGAATATC+GGG | + | chr5.1:5976120-5976139 | MS.gene09768:intron | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | - | chr5.1:5976346-5976365 | None:intergenic | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | + | chr5.1:5976561-5976580 | MS.gene09768:CDS | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | + | chr5.1:5976560-5976579 | MS.gene09768:CDS | 35.0% | |
| TTTCAATTGAGATTTGGCCT+CGG | - | chr5.1:5976070-5976089 | None:intergenic | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | + | chr5.1:5975803-5975822 | MS.gene09768:CDS | 35.0% |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | chr5.1:5975660-5975679 | MS.gene09768:intron | 35.0% |
| !!! | GGTTGATGACAAATCGTTTT+GGG | + | chr5.1:5976039-5976058 | MS.gene09768:intron | 35.0% |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | + | chr5.1:5975867-5975886 | MS.gene09768:CDS | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | - | chr5.1:5976149-5976168 | None:intergenic | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | + | chr5.1:5976012-5976031 | MS.gene09768:intron | 35.0% |
| AACAATAGAGCCAAGCAACT+GGG | - | chr5.1:5975934-5975953 | None:intergenic | 40.0% | |
| ACAACGAACCCAATAGCAAT+GGG | - | chr5.1:5976451-5976470 | None:intergenic | 40.0% | |
| ACTCTGATAGATAAGCCTTG+AGG | - | chr5.1:5975141-5975160 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | - | chr5.1:5975170-5975189 | None:intergenic | 40.0% | |
| ATAGAAGAGACCAGTTAGGA+TGG | - | chr5.1:5975904-5975923 | None:intergenic | 40.0% | |
| CTCTGATAGATAAGCCTTGA+GGG | - | chr5.1:5975140-5975159 | None:intergenic | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | + | chr5.1:5976565-5976584 | MS.gene09768:CDS | 40.0% | |
| GCTAATCCAAAAGTAACAGC+TGG | - | chr5.1:5975864-5975883 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | + | chr5.1:5976551-5976570 | MS.gene09768:CDS | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | + | chr5.1:5976018-5976037 | MS.gene09768:intron | 40.0% | |
| TCCAATAGAAGAGACCAGTT+AGG | - | chr5.1:5975908-5975927 | None:intergenic | 40.0% | |
| TTCAATTGAGATTTGGCCTC+GGG | - | chr5.1:5976069-5976088 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | + | chr5.1:5975169-5975188 | MS.gene09768:CDS | 40.0% |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | + | chr5.1:5976451-5976470 | MS.gene09768:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | + | chr5.1:5975175-5975194 | MS.gene09768:CDS | 40.0% |
| ! | GACGCCTTTCCATTTAAAAC+TGG | + | chr5.1:5976142-5976161 | MS.gene09768:intron | 40.0% |
| ! | GCCTTTCCATTTAAAACTGG+AGG | + | chr5.1:5976145-5976164 | MS.gene09768:intron | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | - | chr5.1:5976421-5976440 | None:intergenic | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | - | chr5.1:5976661-5976680 | None:intergenic | 40.0% |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | + | chr5.1:5975904-5975923 | MS.gene09768:CDS | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | - | chr5.1:5976420-5976439 | None:intergenic | 40.0% |
| !! | TATTGGGTTGGACCTTTGAT+AGG | + | chr5.1:5976577-5976596 | MS.gene09768:CDS | 40.0% |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | + | chr5.1:5975870-5975889 | MS.gene09768:CDS | 40.0% |
| !!! | CGGTTGATGACAAATCGTTT+TGG | + | chr5.1:5976038-5976057 | MS.gene09768:intron | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | + | chr5.1:5975855-5975874 | MS.gene09768:CDS | 40.0% |
| AAGTTTCCACTAACCACAGC+TGG | - | chr5.1:5976541-5976560 | None:intergenic | 45.0% | |
| ACCACATTCATGTCACGTCT+CGG | + | chr5.1:5975474-5975493 | MS.gene09768:intron | 45.0% | |
| ACCATTGCACCCATTGCTAT+TGG | + | chr5.1:5976439-5976458 | MS.gene09768:CDS | 45.0% | |
| AGACGTGACATGAATGTGGT+TGG | - | chr5.1:5975474-5975493 | None:intergenic | 45.0% | |
| AGTTTCCACTAACCACAGCT+GGG | - | chr5.1:5976540-5976559 | None:intergenic | 45.0% | |
| ATAGCAGCAAACATCTCAGG+TGG | + | chr5.1:5975828-5975847 | MS.gene09768:CDS | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | - | chr5.1:5976654-5976673 | None:intergenic | 45.0% | |
| ATTTAGCATTGCCTCCCTCA+AGG | + | chr5.1:5975123-5975142 | MS.gene09768:CDS | 45.0% | |
| CAACAATAGAGCCAAGCAAC+TGG | - | chr5.1:5975935-5975954 | None:intergenic | 45.0% | |
| GACAACGAACCCAATAGCAA+TGG | - | chr5.1:5976452-5976471 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | - | chr5.1:5976655-5976674 | None:intergenic | 45.0% | |
| TATTGGATTGCCCAGTTGCT+TGG | + | chr5.1:5975921-5975940 | MS.gene09768:CDS | 45.0% | |
| TCTAACATCAGATGCAGCCT+TGG | + | chr5.1:5975743-5975762 | MS.gene09768:CDS | 45.0% | |
| TGATAGATAAGCCTTGAGGG+AGG | - | chr5.1:5975137-5975156 | None:intergenic | 45.0% | |
| TTCATTGAACCGCCACTGAA+TGG | - | chr5.1:5976499-5976518 | None:intergenic | 45.0% | |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | - | chr5.1:5975829-5975848 | None:intergenic | 45.0% |
| ! | CCATTGCACCCATTGCTATT+GGG | + | chr5.1:5976440-5976459 | MS.gene09768:CDS | 45.0% |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | - | chr5.1:5976422-5976441 | None:intergenic | 45.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | + | chr5.1:5976406-5976425 | MS.gene09768:CDS | 50.0% | |
| ACCTTTGATAGGAGGAGGCT+TGG | + | chr5.1:5976588-5976607 | MS.gene09768:CDS | 50.0% | |
| CCCAATAGCAATGGGTGCAA+TGG | - | chr5.1:5976443-5976462 | None:intergenic | 50.0% | |
| CCTCAATTACGTCACCGCTA+AGG | + | chr5.1:5975965-5975984 | MS.gene09768:CDS | 50.0% | |
| CCTTAGCGGTGACGTAATTG+AGG | - | chr5.1:5975968-5975987 | None:intergenic | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | + | chr5.1:5976415-5976434 | MS.gene09768:CDS | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | + | chr5.1:5975825-5975844 | MS.gene09768:CDS | 50.0% | |
| GGCAACATCACCATCCTAAC+TGG | + | chr5.1:5975891-5975910 | MS.gene09768:CDS | 50.0% | |
| GTTGGACCTTTGATAGGAGG+AGG | + | chr5.1:5976583-5976602 | MS.gene09768:CDS | 50.0% | |
| TAGCGGTGACGTAATTGAGG+AGG | - | chr5.1:5975965-5975984 | None:intergenic | 50.0% | |
| TCCGAGACGTGACATGAATG+TGG | - | chr5.1:5975478-5975497 | None:intergenic | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | - | chr5.1:5975886-5975905 | None:intergenic | 50.0% |
| ! | TGGGTTGGACCTTTGATAGG+AGG | + | chr5.1:5976580-5976599 | MS.gene09768:CDS | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | - | chr5.1:5976653-5976672 | None:intergenic | 50.0% |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | + | chr5.1:5976301-5976320 | MS.gene09768:intron | 50.0% |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | + | chr5.1:5976604-5976623 | MS.gene09768:CDS | 50.0% |
| !!! | AATCGTTTTGGGAAAGCCCG+AGG | + | chr5.1:5976050-5976069 | MS.gene09768:intron | 50.0% |
| AGATGCAGCCTTGGATCCAG+CGG | + | chr5.1:5975752-5975771 | MS.gene09768:CDS | 55.0% | |
| CACAGCAGCTGACCCCAAAA+AGG | + | chr5.1:5976405-5976424 | MS.gene09768:CDS | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | - | chr5.1:5975763-5975782 | None:intergenic | 55.0% | |
| CAGTGGCGGTTCAATGAACC+CGG | + | chr5.1:5976501-5976520 | MS.gene09768:CDS | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | + | chr5.1:5976306-5976325 | MS.gene09768:intron | 55.0% | |
| GCCAAGCCTCCTCCTATCAA+AGG | - | chr5.1:5976592-5976611 | None:intergenic | 55.0% | |
| GGGTTTAGTGGCAGTAGCTG+TGG | + | chr5.1:5975773-5975792 | MS.gene09768:CDS | 55.0% | |
| TGAACCGCCACTGAATGGAC+CGG | - | chr5.1:5976494-5976513 | None:intergenic | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | + | chr5.1:5976593-5976612 | MS.gene09768:CDS | 55.0% | |
| TTGATAGGAGGAGGCTTGGC+TGG | + | chr5.1:5976592-5976611 | MS.gene09768:CDS | 55.0% | |
| TTTGGCCCAGCTGTGGTTAG+TGG | + | chr5.1:5976532-5976551 | MS.gene09768:CDS | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+TGG | + | chr5.1:5976514-5976533 | MS.gene09768:CDS | 55.0% |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | + | chr5.1:5975761-5975780 | MS.gene09768:CDS | 55.0% |
| ! | GCTGGTCTGAACCCTATTGC+TGG | + | chr5.1:5976331-5976350 | MS.gene09768:CDS | 55.0% |
| !! | GGAAAGGCGTCCCGATATTC+AGG | - | chr5.1:5976133-5976152 | None:intergenic | 55.0% |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | - | chr5.1:5976407-5976426 | None:intergenic | 55.0% |
| CAGACCAGCAGCCACTCCAT+GGG | - | chr5.1:5976320-5976339 | None:intergenic | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | + | chr5.1:5975753-5975772 | MS.gene09768:CDS | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | - | chr5.1:5975771-5975790 | None:intergenic | 60.0% | |
| GGTGCCAACATCTTAGCCGC+CGG | + | chr5.1:5976472-5976491 | MS.gene09768:CDS | 60.0% | |
| TCAGACCAGCAGCCACTCCA+TGG | - | chr5.1:5976321-5976340 | None:intergenic | 60.0% | |
| TCGCTCATTTGGCCCAGCTG+TGG | + | chr5.1:5976525-5976544 | MS.gene09768:CDS | 60.0% | |
| TGGACCGGCGGCTAAGATGT+TGG | - | chr5.1:5976479-5976498 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | + | chr5.1:5976484-5976503 | MS.gene09768:CDS | 60.0% | |
| ACCGCCACTGAATGGACCGG+CGG | - | chr5.1:5976491-5976510 | None:intergenic | 65.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | + | chr5.1:5976313-5976332 | MS.gene09768:CDS | 65.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | - | chr5.1:5976316-5976335 | None:intergenic | 65.0% | |
| CTGGGCCAAATGAGCGAGCC+GGG | - | chr5.1:5976522-5976541 | None:intergenic | 65.0% | |
| GCTGGGCCAAATGAGCGAGC+CGG | - | chr5.1:5976523-5976542 | None:intergenic | 65.0% | |
| GCCGCCGGTCCATTCAGTGG+CGG | + | chr5.1:5976487-5976506 | MS.gene09768:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 5975088 | 5976681 | 5975088 | ID=MS.gene09768 |
| chr5.1 | mRNA | 5975088 | 5976681 | 5975088 | ID=MS.gene09768.t1;Parent=MS.gene09768 |
| chr5.1 | exon | 5975088 | 5975214 | 5975088 | ID=MS.gene09768.t1.exon1;Parent=MS.gene09768.t1 |
| chr5.1 | CDS | 5975088 | 5975214 | 5975088 | ID=cds.MS.gene09768.t1;Parent=MS.gene09768.t1 |
| chr5.1 | exon | 5975739 | 5975986 | 5975739 | ID=MS.gene09768.t1.exon2;Parent=MS.gene09768.t1 |
| chr5.1 | CDS | 5975739 | 5975986 | 5975739 | ID=cds.MS.gene09768.t1;Parent=MS.gene09768.t1 |
| chr5.1 | exon | 5976307 | 5976681 | 5976307 | ID=MS.gene09768.t1.exon3;Parent=MS.gene09768.t1 |
| chr5.1 | CDS | 5976307 | 5976681 | 5976307 | ID=cds.MS.gene09768.t1;Parent=MS.gene09768.t1 |
| Gene Sequence |
| Protein sequence |
