Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25706.t1 | XP_003601493.2 | 84.4 | 468 | 31 | 3 | 1 | 468 | 16 | 441 | 1.10E-215 | 759.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25706.t1 | G7J847 | 84.4 | 468 | 31 | 3 | 1 | 468 | 16 | 441 | 8.0e-216 | 759.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene25706 | 0.815179 | 1.06E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene25706 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene25706 | 0.804884 | 1.74E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene25706 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene25706 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene050137 | MS.gene25706 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene050156 | MS.gene25706 | 0.818275 | 2.13E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene25706 | 0.805039 | 1.62E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene25706 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene25706 | 0.813685 | 2.26E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene25706 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene25706 | 0.825355 | 4.91E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene25706 | 0.818959 | 1.49E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene25706 | 0.818405 | 1.99E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene25706 | 0.80359 | 3.24E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene25706 | 0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene25706 | 0.812684 | 3.74E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene25706 | 0.819819 | 9.50E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene25706 | 0.827665 | 1.38E-54 | -1.69E-46 |
| MS.gene051210 | MS.gene25706 | 0.801279 | 9.71E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene25706 | 0.817591 | 3.05E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene25706 | 0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene25706 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene051935 | MS.gene25706 | 0.811342 | 7.35E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene25706 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene25706 | 0.81111 | 8.25E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene25706 | 0.829101 | 6.21E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene25706 | 0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene25706 | 0.808722 | 2.69E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene25706 | 0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene25706 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene25706 | 0.813007 | 3.18E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene25706 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene052858 | MS.gene25706 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene25706 | 0.812112 | 5.00E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene25706 | 0.854613 | 1.10E-61 | -1.69E-46 |
| MS.gene053221 | MS.gene25706 | 0.803181 | 3.94E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene25706 | 0.801783 | 7.65E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene25706 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene25706 | 0.819003 | 1.46E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene25706 | 0.837764 | 4.29E-57 | -1.69E-46 |
| MS.gene054472 | MS.gene25706 | 0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene25706 | 0.821125 | 4.77E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene25706 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene25706 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene25706 | 0.826691 | 2.36E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene25706 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene25706 | 0.819275 | 1.27E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene25706 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene25706 | 0.803837 | 2.88E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene25706 | 0.829609 | 4.68E-55 | -1.69E-46 |
| MS.gene057360 | MS.gene25706 | 0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene057869 | MS.gene25706 | 0.819357 | 1.21E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene25706 | 0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene25706 | 0.823384 | 1.43E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene25706 | 0.829006 | 6.55E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene25706 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene25706 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene25706 | 0.815981 | 7.00E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene25706 | 0.817496 | 3.20E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene25706 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene25706 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene25706 | 0.800982 | 1.12E-48 | -1.69E-46 |
| MS.gene060781 | MS.gene25706 | 0.807252 | 5.53E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene25706 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene25706 | 0.812855 | 3.44E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene25706 | -0.802545 | 5.33E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 103 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAAAATTCAGGTGAATT+TGG | 0.182393 | 3.3:-69208025 | MS.gene25706:intron |
| GATAGATTTCACAATGCTTT+AGG | 0.198003 | 3.3:-69208485 | MS.gene25706:CDS |
| GCGCGATTAGATTTGTTAAA+AGG | 0.237162 | 3.3:-69211743 | MS.gene25706:intron |
| CAATTCGTCTTCCTCATTTC+AGG | 0.246776 | 3.3:-69211617 | MS.gene25706:intron |
| ATAGATTTCACAATGCTTTA+GGG | 0.281106 | 3.3:-69208484 | MS.gene25706:CDS |
| TCAACAGCTTTCATAATTTC+AGG | 0.309850 | 3.3:+69209033 | None:intergenic |
| GATCCGCTATCCACAGGTTC+AGG | 0.328904 | 3.3:+69208660 | None:intergenic |
| AGGCCTTCTGCAAGTTTAGA+TGG | 0.329905 | 3.3:-69209006 | MS.gene25706:CDS |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.356470 | 3.3:-69210685 | MS.gene25706:CDS |
| TGAGTTTAATCTTCCCCTAA+TGG | 0.371118 | 3.3:-69208908 | MS.gene25706:CDS |
| CTCGTACAAGCTAAAGGAAT+GGG | 0.371558 | 3.3:-69207049 | MS.gene25706:CDS |
| AACTCTTGGACTAAAGATAA+TGG | 0.371714 | 3.3:+69206997 | None:intergenic |
| TCATCAGTGACACATAACTA+TGG | 0.382019 | 3.3:-69209093 | MS.gene25706:CDS |
| CAACAACCGTCTCTGGCAAA+TGG | 0.384581 | 3.3:+69208697 | None:intergenic |
| TGATAACTGTTGCAGGCATC+TGG | 0.391339 | 3.3:-69209146 | MS.gene25706:intron |
| CTTCAATCTCTAATATTGAT+AGG | 0.393259 | 3.3:-69209059 | MS.gene25706:CDS |
| AGTAATTCTCATGTGTTGAT+TGG | 0.396579 | 3.3:+69208538 | None:intergenic |
| GGTGACAACCGCGATGTATT+GGG | 0.400453 | 3.3:-69211267 | MS.gene25706:CDS |
| CCACCTCTCCCAATTCATTC+CGG | 0.417889 | 3.3:+69210697 | None:intergenic |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.418461 | 3.3:-69211247 | MS.gene25706:CDS |
| GGGTGACAACCGGAATGAAT+TGG | 0.424438 | 3.3:-69210706 | MS.gene25706:CDS |
| GGGTGACAACCGCGATGTAT+TGG | 0.429794 | 3.3:-69211268 | MS.gene25706:CDS |
| TCACTGTCAACAACCGTCTC+TGG | 0.431199 | 3.3:+69208690 | None:intergenic |
| TTATGAAAGCTGTTGATCAT+AGG | 0.434946 | 3.3:-69209026 | MS.gene25706:CDS |
| TCATCATTTCTGATAAATTG+AGG | 0.438657 | 3.3:+69210206 | None:intergenic |
| TCAACATTGTCGCAAACTCT+TGG | 0.448555 | 3.3:+69206983 | None:intergenic |
| GGTGACAACCGGAATGAATT+GGG | 0.448874 | 3.3:-69210705 | MS.gene25706:CDS |
| AGAACAACAACTACCTCTTC+CGG | 0.454301 | 3.3:-69211765 | MS.gene25706:CDS |
| CATCATTTCTGATAAATTGA+GGG | 0.460688 | 3.3:+69210207 | None:intergenic |
| CCACGTGATAATCAAAGAAA+AGG | 0.463174 | 3.3:-69208756 | MS.gene25706:CDS |
| CTTACCACGGAGGGTGAATA+CGG | 0.464811 | 3.3:+69206939 | None:intergenic |
| CAAGCTAAAGGAATGGGGTT+TGG | 0.465002 | 3.3:-69207043 | MS.gene25706:CDS |
| TAAGCGTGAACGAACCTTGT+TGG | 0.467219 | 3.3:+69211868 | None:intergenic |
| GGATTAAGCTCCCCACTTCA+AGG | 0.468431 | 3.3:+69206960 | None:intergenic |
| GGGTTTGGTGGCAGCAAAGA+TGG | 0.469797 | 3.3:-69207028 | MS.gene25706:CDS |
| AACAACCGTCTCTGGCAAAT+GGG | 0.479682 | 3.3:+69208698 | None:intergenic |
| AAATCTAATCGCGCCGGAAG+AGG | 0.480654 | 3.3:+69211752 | None:intergenic |
| ACACATGAGAATTACTTTCC+CGG | 0.482287 | 3.3:-69208531 | MS.gene25706:CDS |
| TTGTCACCCTCGTTGAAGTC+CGG | 0.487456 | 3.3:+69211282 | None:intergenic |
| CACATGAGAATTACTTTCCC+GGG | 0.495518 | 3.3:-69208530 | MS.gene25706:CDS |
| AGCTTCAGTTTCAGAAGGCT+CGG | 0.501715 | 3.3:+69208939 | None:intergenic |
| TTCTCAAAAGCAAATTCATC+CGG | 0.509214 | 3.3:-69210113 | MS.gene25706:intron |
| ACTTCAATGAGGGTGACAAC+CGG | 0.512111 | 3.3:-69210716 | MS.gene25706:CDS |
| CCTCCTGGATAAGACTGATC+TGG | 0.514851 | 3.3:-69208869 | MS.gene25706:intron |
| GCTAAAGGAATGGGGTTTGG+TGG | 0.518261 | 3.3:-69207040 | MS.gene25706:CDS |
| CCACCAGATCAGTCTTATCC+AGG | 0.521993 | 3.3:+69208866 | None:intergenic |
| AAACAATCAGCTTTCCATCC+AGG | 0.522382 | 3.3:+69207972 | None:intergenic |
| AGATGAGGAGGTTGAAATGC+CGG | 0.528294 | 3.3:-69210739 | MS.gene25706:CDS |
| AGATGAGGAGGTTGAAATGC+CGG | 0.528294 | 3.3:-69211301 | MS.gene25706:CDS |
| TCTCGTACAAGCTAAAGGAA+TGG | 0.530008 | 3.3:-69207050 | MS.gene25706:CDS |
| CTATCAATATTAGAGATTGA+AGG | 0.532326 | 3.3:+69209060 | None:intergenic |
| ACGAAAGAAGATTAGCGTAA+TGG | 0.532658 | 3.3:+69211906 | None:intergenic |
| TTGTCACCCTCATTGAAGTC+CGG | 0.534546 | 3.3:+69210720 | None:intergenic |
| ATCCGCTATCCACAGGTTCA+GGG | 0.539339 | 3.3:+69208661 | None:intergenic |
| TCTGTTATCGCTGAAAGTGT+TGG | 0.540296 | 3.3:-69208455 | MS.gene25706:CDS |
| AAGCATCATTTCAAGATACC+TGG | 0.547835 | 3.3:-69207990 | MS.gene25706:CDS |
| CTTGATGATCCGCTATCCAC+AGG | 0.549070 | 3.3:+69208654 | None:intergenic |
| AAACTTTAATACCTGAAATG+AGG | 0.572915 | 3.3:+69211606 | None:intergenic |
| CATCAGTGACACATAACTAT+GGG | 0.578285 | 3.3:-69209092 | MS.gene25706:CDS |
| AACGAACCTTGTTGGTAGCG+TGG | 0.586095 | 3.3:+69211876 | None:intergenic |
| CGACAATGTTGACCTTGAAG+TGG | 0.588515 | 3.3:-69206972 | MS.gene25706:CDS |
| CAAGCTGGAGCTAGACCAGA+TGG | 0.589856 | 3.3:-69208240 | MS.gene25706:intron |
| CCGGAATGAATTGGGAGAGG+TGG | 0.590158 | 3.3:-69210697 | MS.gene25706:CDS |
| TCAGAAGTCGCTCGAAGATG+AGG | 0.591232 | 3.3:-69211316 | MS.gene25706:intron |
| TCTCGAAGATGATGACATAG+TGG | 0.595575 | 3.3:-69208977 | MS.gene25706:CDS |
| TTTGGACGAGTCTGGTCGAG+AGG | 0.596618 | 3.3:+69210237 | None:intergenic |
| TATATCCCATTTGCCAGAGA+CGG | 0.597841 | 3.3:-69208703 | MS.gene25706:CDS |
| TCAGAAGTTGCTCGAAGATG+AGG | 0.601211 | 3.3:-69210754 | MS.gene25706:intron |
| CCGCGATGTATTGGGAGAGG+TGG | 0.603884 | 3.3:-69211259 | MS.gene25706:CDS |
| CAACCGCGATGTATTGGGAG+AGG | 0.605775 | 3.3:-69211262 | MS.gene25706:CDS |
| TGACGACTCCCCTGAACCTG+TGG | 0.607193 | 3.3:-69208670 | MS.gene25706:CDS |
| GGGAAAGAAAATGCAGACAA+TGG | 0.609349 | 3.3:-69208510 | MS.gene25706:CDS |
| GGACGAGCTTCAGTTTCAGA+AGG | 0.609678 | 3.3:+69208934 | None:intergenic |
| CGGATCATCAAGTGACAATG+AGG | 0.613056 | 3.3:-69208643 | MS.gene25706:intron |
| GACAATGTTGACCTTGAAGT+GGG | 0.615907 | 3.3:-69206971 | MS.gene25706:CDS |
| AGGCATCTGGAACAAAGCTA+AGG | 0.618629 | 3.3:-69209133 | MS.gene25706:CDS |
| CAACCGGAATGAATTGGGAG+AGG | 0.619194 | 3.3:-69210700 | MS.gene25706:CDS |
| ACAAAACCACGCTACCAACA+AGG | 0.621213 | 3.3:-69211882 | MS.gene25706:intron |
| TCCCCTGAACCTGTGGATAG+CGG | 0.621484 | 3.3:-69208663 | MS.gene25706:CDS |
| ACACATAACTATGGGCACAC+TGG | 0.625934 | 3.3:-69209084 | MS.gene25706:CDS |
| TGAAATGCCGGACTTCAATG+AGG | 0.626528 | 3.3:-69210727 | MS.gene25706:CDS |
| TTTCCATCTAAACTTGCAGA+AGG | 0.628441 | 3.3:+69209003 | None:intergenic |
| TTTAACAAATCTAATCGCGC+CGG | 0.629342 | 3.3:+69211746 | None:intergenic |
| TCGTACAAGCTAAAGGAATG+GGG | 0.631068 | 3.3:-69207048 | MS.gene25706:CDS |
| AGGGGAAGATTAAACTCATG+TGG | 0.635532 | 3.3:+69208913 | None:intergenic |
| TCCGCTATCCACAGGTTCAG+GGG | 0.635538 | 3.3:+69208662 | None:intergenic |
| TTGGAGCACATAACTCATTG+AGG | 0.636699 | 3.3:-69208436 | MS.gene25706:intron |
| AGATAATGTTTCTGAAGATG+AGG | 0.638275 | 3.3:-69210655 | MS.gene25706:intron |
| CTCATTTAGCAAGTATACCG+AGG | 0.644633 | 3.3:-69207942 | MS.gene25706:intron |
| CATAGCAATCTTACCACGGA+GGG | 0.644759 | 3.3:+69206930 | None:intergenic |
| GAAGTTGCTCGAAGATGAGG+AGG | 0.651692 | 3.3:-69210751 | MS.gene25706:CDS |
| ATCATTTCAAGATACCTGGA+TGG | 0.654090 | 3.3:-69207986 | MS.gene25706:CDS |
| GAAGTCGCTCGAAGATGAGG+AGG | 0.656514 | 3.3:-69211313 | MS.gene25706:intron |
| GAAATGCCGGACTTCAATGA+GGG | 0.659726 | 3.3:-69210726 | MS.gene25706:CDS |
| GAAATGCCGGACTTCAACGA+GGG | 0.667414 | 3.3:-69211288 | MS.gene25706:CDS |
| AGATACTGTTTCTAACAATG+AGG | 0.683730 | 3.3:-69211217 | MS.gene25706:intron |
| AACACTTTCAGCGATAACAG+AGG | 0.693650 | 3.3:+69208457 | None:intergenic |
| TGAAATGCCGGACTTCAACG+AGG | 0.693709 | 3.3:-69211289 | MS.gene25706:CDS |
| CCAGATCAGTCTTATCCAGG+AGG | 0.693888 | 3.3:+69208869 | None:intergenic |
| TAATCCGTATTCACCCTCCG+TGG | 0.736498 | 3.3:-69206943 | None:intergenic |
| ACATAGCAATCTTACCACGG+AGG | 0.757199 | 3.3:+69206929 | None:intergenic |
| ACAATGTTGACCTTGAAGTG+GGG | 0.758346 | 3.3:-69206970 | MS.gene25706:CDS |
| CCACCTCTCCCAATACATCG+CGG | 0.777541 | 3.3:+69211259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTAATTAATTAATATTT+AGG | + | chr3.3:69207145-69207164 | None:intergenic | 10.0% |
| !!! | AGATTTACTTTTTTTTTTTT+TGG | - | chr3.3:69209612-69209631 | MS.gene25706:intron | 10.0% |
| !!! | TATTTTTTATATTTTCATCT+CGG | - | chr3.3:69209134-69209153 | MS.gene25706:CDS | 10.0% |
| !!! | TTTTTTGAAAGAAATAATTT+CGG | - | chr3.3:69208350-69208369 | MS.gene25706:intron | 10.0% |
| !! | ATTGTAATTGTAATTAAATG+AGG | + | chr3.3:69208069-69208088 | None:intergenic | 15.0% |
| !! | CATAATCAAACATTAAATAA+GGG | + | chr3.3:69211753-69211772 | None:intergenic | 15.0% |
| !! | TAATTATATCAATGTTTGAA+TGG | - | chr3.3:69209667-69209686 | MS.gene25706:intron | 15.0% |
| !! | TCATAATCAAACATTAAATA+AGG | + | chr3.3:69211754-69211773 | None:intergenic | 15.0% |
| !! | TCATATTAGTTCATAAATAA+TGG | + | chr3.3:69207970-69207989 | None:intergenic | 15.0% |
| !! | TTGTAATTGTAATTAAATGA+GGG | + | chr3.3:69208068-69208087 | None:intergenic | 15.0% |
| !!! | AATGATAATTTTACTTGAAA+TGG | - | chr3.3:69211702-69211721 | MS.gene25706:intron | 15.0% |
| !!! | AATTAATCATAGTTCTAAAA+GGG | + | chr3.3:69209008-69209027 | None:intergenic | 15.0% |
| !!! | ATCGTTTCTTTATTTTTAAA+GGG | - | chr3.3:69208591-69208610 | MS.gene25706:intron | 15.0% |
| !!! | ATCTTTTCTTTATTCTTAAA+GGG | - | chr3.3:69208034-69208053 | MS.gene25706:intron | 15.0% |
| !!! | ATGATTTTATCTTTTATGTT+TGG | - | chr3.3:69207752-69207771 | MS.gene25706:intron | 15.0% |
| !!! | GTTTTTTCTTTTCATTTTTT+GGG | - | chr3.3:69210738-69210757 | MS.gene25706:CDS | 15.0% |
| !!! | TAATTAATCATAGTTCTAAA+AGG | + | chr3.3:69209009-69209028 | None:intergenic | 15.0% |
| !!! | TATCGTTTCTTTATTTTTAA+AGG | - | chr3.3:69208590-69208609 | MS.gene25706:intron | 15.0% |
| !!! | TATCTTTTCTTTATTCTTAA+AGG | - | chr3.3:69208033-69208052 | MS.gene25706:intron | 15.0% |
| !!! | TGTTTTTTCTTTTCATTTTT+TGG | - | chr3.3:69210737-69210756 | MS.gene25706:CDS | 15.0% |
| !!! | TTTTTAATAGTTTGTATGTT+GGG | - | chr3.3:69211346-69211365 | MS.gene25706:intron | 15.0% |
| !!! | TTTTTTCTTTTCATTTTTTG+GGG | - | chr3.3:69210739-69210758 | MS.gene25706:CDS | 15.0% |
| !! | AAAAAACATAAACAAACACA+TGG | + | chr3.3:69207709-69207728 | None:intergenic | 20.0% |
| !! | AAAAAAGTAAATGGATGTTA+TGG | - | chr3.3:69209391-69209410 | MS.gene25706:intron | 20.0% |
| !! | AATGTTTGATTATGATTTGA+TGG | - | chr3.3:69211759-69211778 | MS.gene25706:CDS | 20.0% |
| !! | ATTGACAATATTTGCAAAAA+TGG | + | chr3.3:69209457-69209476 | None:intergenic | 20.0% |
| !! | TAATCTGTTAGTTATATCTT+GGG | + | chr3.3:69209190-69209209 | None:intergenic | 20.0% |
| !! | TATAATAGAAAACTTAGTCT+TGG | + | chr3.3:69211385-69211404 | None:intergenic | 20.0% |
| !! | TCATATTAGTTCATAAACAA+TGG | + | chr3.3:69208527-69208546 | None:intergenic | 20.0% |
| !! | TGTAAAGAAAATATGTTAGA+GGG | + | chr3.3:69209575-69209594 | None:intergenic | 20.0% |
| !! | TGTTTCTTCAAAAAAGTAAA+TGG | - | chr3.3:69209382-69209401 | MS.gene25706:intron | 20.0% |
| !! | TTAATAACAACCAAACAAAA+GGG | + | chr3.3:69208289-69208308 | None:intergenic | 20.0% |
| !! | TTAATCTGTTAGTTATATCT+TGG | + | chr3.3:69209191-69209210 | None:intergenic | 20.0% |
| !! | TTACAAAGAAACTAAAATTC+AGG | - | chr3.3:69210826-69210845 | MS.gene25706:intron | 20.0% |
| !! | TTATGTTAACATATGAGTAA+TGG | - | chr3.3:69207815-69207834 | MS.gene25706:intron | 20.0% |
| !! | TTATTAATTCATTCTTACTC+AGG | - | chr3.3:69207283-69207302 | MS.gene25706:intron | 20.0% |
| !! | TTGACAATATTTGCAAAAAT+GGG | + | chr3.3:69209456-69209475 | None:intergenic | 20.0% |
| !! | TTGTAAAGAAAATATGTTAG+AGG | + | chr3.3:69209576-69209595 | None:intergenic | 20.0% |
| !!! | AAACTGAAAATATTTGTTAG+TGG | - | chr3.3:69208834-69208853 | MS.gene25706:intron | 20.0% |
| !!! | AAATATTTTCAGTTTCAACA+GGG | + | chr3.3:69208829-69208848 | None:intergenic | 20.0% |
| !!! | AACTGAAAATATTTGTTAGT+GGG | - | chr3.3:69208835-69208854 | MS.gene25706:intron | 20.0% |
| !!! | AGAAACTTTTTATTAGAAAG+TGG | + | chr3.3:69211143-69211162 | None:intergenic | 20.0% |
| !!! | ATATGTGACATTTTTAATGA+TGG | - | chr3.3:69209421-69209440 | MS.gene25706:intron | 20.0% |
| !!! | CATATTTTCTTTACAAAAGA+TGG | - | chr3.3:69209580-69209599 | MS.gene25706:intron | 20.0% |
| !!! | CTTTTTAATAGTTTGTATGT+TGG | - | chr3.3:69211345-69211364 | MS.gene25706:intron | 20.0% |
| !!! | GTCTTTGAAAGATATAATTT+CGG | - | chr3.3:69207792-69207811 | MS.gene25706:intron | 20.0% |
| !!! | GTGATTTTATCTTTTATGTT+TGG | - | chr3.3:69208309-69208328 | MS.gene25706:CDS | 20.0% |
| !!! | TACAATTATTATTGTTGTTG+TGG | - | chr3.3:69207521-69207540 | MS.gene25706:intron | 20.0% |
| !!! | TATGTTTTTTCCTTTTGTTT+GGG | - | chr3.3:69207719-69207738 | MS.gene25706:intron | 20.0% |
| !!! | TGGAGTTTTTTATATTATCA+AGG | + | chr3.3:69211123-69211142 | None:intergenic | 20.0% |
| !!! | TTATGTTTTTTCCTTTTGTT+TGG | - | chr3.3:69207718-69207737 | MS.gene25706:intron | 20.0% |
| ! | AAACTTTAATACCTGAAATG+AGG | + | chr3.3:69207257-69207276 | None:intergenic | 25.0% |
| ! | AACTAAAATTCAGGTGAATT+TGG | - | chr3.3:69210835-69210854 | MS.gene25706:intron | 25.0% |
| ! | AACTAAACCAATCTACATTT+AGG | + | chr3.3:69207860-69207879 | None:intergenic | 25.0% |
| ! | AATATTTGAAAAACTACAGC+AGG | - | chr3.3:69210550-69210569 | MS.gene25706:intron | 25.0% |
| ! | ACTAAACCAATCTACATTTA+AGG | + | chr3.3:69207859-69207878 | None:intergenic | 25.0% |
| ! | AGTATAAAGCATAAACTTTC+AGG | + | chr3.3:69210989-69211008 | None:intergenic | 25.0% |
| ! | ATAGATTTCACAATGCTTTA+GGG | - | chr3.3:69210376-69210395 | MS.gene25706:intron | 25.0% |
| ! | ATATACATGGAAAAGTAAAC+AGG | + | chr3.3:69210057-69210076 | None:intergenic | 25.0% |
| ! | CATCATTTCTGATAAATTGA+GGG | + | chr3.3:69208656-69208675 | None:intergenic | 25.0% |
| ! | CTATCAATATTAGAGATTGA+AGG | + | chr3.3:69209803-69209822 | None:intergenic | 25.0% |
| ! | CTTAATAACAACCAAACAAA+AGG | + | chr3.3:69208290-69208309 | None:intergenic | 25.0% |
| ! | CTTCAATCTCTAATATTGAT+AGG | - | chr3.3:69209801-69209820 | MS.gene25706:intron | 25.0% |
| ! | GTATAAAGCATAAACTTTCA+GGG | + | chr3.3:69210988-69211007 | None:intergenic | 25.0% |
| ! | GTTATTCTTATAAGCTATCT+TGG | - | chr3.3:69207362-69207381 | MS.gene25706:intron | 25.0% |
| ! | TAATGTTAGCAAATGAGTAA+TGG | - | chr3.3:69208373-69208392 | MS.gene25706:intron | 25.0% |
| ! | TCATCATTTCTGATAAATTG+AGG | + | chr3.3:69208657-69208676 | None:intergenic | 25.0% |
| ! | TTAAATCTGTTTACTTGTAC+AGG | - | chr3.3:69210296-69210315 | MS.gene25706:intron | 25.0% |
| ! | TTAATAACAACCCAAACAAA+AGG | + | chr3.3:69207732-69207751 | None:intergenic | 25.0% |
| ! | TTCAATTGCATAAAAATACC+AGG | + | chr3.3:69210466-69210485 | None:intergenic | 25.0% |
| ! | TTTGATTATGATTTGATGGA+AGG | - | chr3.3:69211763-69211782 | MS.gene25706:CDS | 25.0% |
| !! | ACTGAAAATATTTGTTAGTG+GGG | - | chr3.3:69208836-69208855 | MS.gene25706:intron | 25.0% |
| !! | CAAATATTTTCAGTTTCAAC+AGG | + | chr3.3:69208830-69208849 | None:intergenic | 25.0% |
| !! | TAAGGGTATATCTTAAATGT+AGG | + | chr3.3:69211736-69211755 | None:intergenic | 25.0% |
| !! | TATTAGTCTATTGTCATATC+TGG | - | chr3.3:69210271-69210290 | MS.gene25706:intron | 25.0% |
| !!! | ACATTTGTTTCTAATACACA+TGG | - | chr3.3:69210788-69210807 | MS.gene25706:intron | 25.0% |
| !!! | TTATACTTAAGAAAGTGCTT+GGG | - | chr3.3:69211002-69211021 | MS.gene25706:intron | 25.0% |
| !!! | TTTATACTTAAGAAAGTGCT+TGG | - | chr3.3:69211001-69211020 | MS.gene25706:intron | 25.0% |
| AAACAGGTGTCAAAGAATAA+CGG | + | chr3.3:69210041-69210060 | None:intergenic | 30.0% | |
| AAATTAGTCCTTGTGATTTG+AGG | - | chr3.3:69207880-69207899 | MS.gene25706:intron | 30.0% | |
| AACTCTTGGACTAAAGATAA+TGG | + | chr3.3:69211866-69211885 | None:intergenic | 30.0% | |
| AATCTACATTTAAGGACATC+AGG | + | chr3.3:69207851-69207870 | None:intergenic | 30.0% | |
| ACTTCTCTTCATGTATCAAA+AGG | + | chr3.3:69209486-69209505 | None:intergenic | 30.0% | |
| ATATCTTGGGTTTAACCAAT+AGG | + | chr3.3:69209177-69209196 | None:intergenic | 30.0% | |
| ATGACCAACATTGTATCTTT+CGG | - | chr3.3:69207986-69208005 | MS.gene25706:CDS | 30.0% | |
| GAAATACCTAAACAAACACA+TGG | + | chr3.3:69208267-69208286 | None:intergenic | 30.0% | |
| GATAGATTTCACAATGCTTT+AGG | - | chr3.3:69210375-69210394 | MS.gene25706:intron | 30.0% | |
| TAAGTGATGTTAAGTTCTGT+AGG | - | chr3.3:69209069-69209088 | MS.gene25706:CDS | 30.0% | |
| TATCTTGGGTTTAACCAATA+GGG | + | chr3.3:69209176-69209195 | None:intergenic | 30.0% | |
| TCAACAGCTTTCATAATTTC+AGG | + | chr3.3:69209830-69209849 | None:intergenic | 30.0% | |
| TCTCCTTAACTATATCTTGA+AGG | - | chr3.3:69211171-69211190 | MS.gene25706:intron | 30.0% | |
| TGATGTCCTTAAATGTAGAT+TGG | - | chr3.3:69207850-69207869 | MS.gene25706:intron | 30.0% | |
| TTATGAAAGCTGTTGATCAT+AGG | - | chr3.3:69209834-69209853 | MS.gene25706:intron | 30.0% | |
| TTCTCAAAAGCAAATTCATC+CGG | - | chr3.3:69208747-69208766 | MS.gene25706:CDS | 30.0% | |
| TTGAATTTCAAATCCACACA+GGG | + | chr3.3:69209276-69209295 | None:intergenic | 30.0% | |
| TTGTTACCATGTGTTTGTTT+AGG | - | chr3.3:69207700-69207719 | MS.gene25706:intron | 30.0% | |
| TTTATGAAATTGTGCAGAAC+TGG | - | chr3.3:69210527-69210546 | MS.gene25706:intron | 30.0% | |
| TTTCTGTGCAATAGAGTAAA+TGG | + | chr3.3:69210700-69210719 | None:intergenic | 30.0% | |
| TTTGAATTTCAAATCCACAC+AGG | + | chr3.3:69209277-69209296 | None:intergenic | 30.0% | |
| ! | AAAGCAAAAGTTTTACCATC+TGG | + | chr3.3:69210638-69210657 | None:intergenic | 30.0% |
| ! | AATGAGGTATTACTGTTCTA+TGG | - | chr3.3:69210233-69210252 | MS.gene25706:CDS | 30.0% |
| ! | AATTTTCTCGTACAAGCTAA+AGG | - | chr3.3:69211805-69211824 | MS.gene25706:intron | 30.0% |
| ! | AGATAATGTTTCTGAAGATG+AGG | - | chr3.3:69208205-69208224 | MS.gene25706:intron | 30.0% |
| ! | AGTAATTCTCATGTGTTGAT+TGG | + | chr3.3:69210325-69210344 | None:intergenic | 30.0% |
| ! | CAAGAAAAATGCTAGTTTCT+GGG | - | chr3.3:69208779-69208798 | MS.gene25706:intron | 30.0% |
| ! | CTATTCCATTTGATTTAGAG+AGG | - | chr3.3:69211567-69211586 | MS.gene25706:intron | 30.0% |
| ! | TAAATTGAGGGCCATATTTT+TGG | + | chr3.3:69208644-69208663 | None:intergenic | 30.0% |
| ! | TTAGGTATTTCCCTTTTGTT+TGG | - | chr3.3:69208276-69208295 | MS.gene25706:CDS | 30.0% |
| ! | TTTATGCTCTGAATTGAGTA+AGG | - | chr3.3:69208977-69208996 | MS.gene25706:CDS | 30.0% |
| !! | AGATACTGTTTCTAACAATG+AGG | - | chr3.3:69207643-69207662 | MS.gene25706:intron | 30.0% |
| !! | ATGACTTTTATTTCCCCTAT+TGG | - | chr3.3:69209159-69209178 | MS.gene25706:intron | 30.0% |
| !! | TATTTTAGATATACCCTGTG+TGG | - | chr3.3:69209260-69209279 | MS.gene25706:intron | 30.0% |
| !!! | TCTTTTCATTTTTTGGGGTT+GGG | - | chr3.3:69210744-69210763 | MS.gene25706:CDS | 30.0% |
| !!! | TTCTTTTCATTTTTTGGGGT+TGG | - | chr3.3:69210743-69210762 | MS.gene25706:CDS | 30.0% |
| AAATTAGTCCTTGTGATTCG+AGG | - | chr3.3:69208437-69208456 | MS.gene25706:CDS | 35.0% | |
| AAGCATCATTTCAAGATACC+TGG | - | chr3.3:69210870-69210889 | MS.gene25706:intron | 35.0% | |
| AAGTTAGTCCTCAAATCACA+AGG | + | chr3.3:69207891-69207910 | None:intergenic | 35.0% | |
| ACAAATCCTGAAATGTAGCA+TGG | + | chr3.3:69208950-69208969 | None:intergenic | 35.0% | |
| ACACATGAGAATTACTTTCC+CGG | - | chr3.3:69210329-69210348 | MS.gene25706:intron | 35.0% | |
| ACCTAACTTTCTTTACTTGC+AGG | + | chr3.3:69211433-69211452 | None:intergenic | 35.0% | |
| ACGAAAGAAGATTAGCGTAA+TGG | + | chr3.3:69206957-69206976 | None:intergenic | 35.0% | |
| ACGTGGATACTGAAAAATAG+AGG | + | chr3.3:69210090-69210109 | None:intergenic | 35.0% | |
| AGTATTTAGATGAGACAGAC+AGG | + | chr3.3:69208903-69208922 | None:intergenic | 35.0% | |
| ATACACGACAACTAGTAATG+CGG | + | chr3.3:69209241-69209260 | None:intergenic | 35.0% | |
| ATCATTTCAAGATACCTGGA+TGG | - | chr3.3:69210874-69210893 | MS.gene25706:intron | 35.0% | |
| ATCTTGGGTTTAACCAATAG+GGG | + | chr3.3:69209175-69209194 | None:intergenic | 35.0% | |
| ATGCACCTCTCTAAATCAAA+TGG | + | chr3.3:69211575-69211594 | None:intergenic | 35.0% | |
| CATCAGTGACACATAACTAT+GGG | - | chr3.3:69209768-69209787 | MS.gene25706:intron | 35.0% | |
| CCACGTGATAATCAAAGAAA+AGG | - | chr3.3:69210104-69210123 | MS.gene25706:intron | 35.0% | |
| CTCATTGAGGTATAACATTG+TGG | - | chr3.3:69210437-69210456 | MS.gene25706:intron | 35.0% | |
| CTGATGTCCTAAATGTAGAT+TGG | - | chr3.3:69208407-69208426 | MS.gene25706:intron | 35.0% | |
| CTTAACATCACTTACAGACT+AGG | + | chr3.3:69209063-69209082 | None:intergenic | 35.0% | |
| GAACATGTTAGTTGTAGACT+TGG | - | chr3.3:69211490-69211509 | MS.gene25706:intron | 35.0% | |
| GGGTATATCTTAAATGTAGG+TGG | + | chr3.3:69211733-69211752 | None:intergenic | 35.0% | |
| GTAAATGGATGTTATGGATC+TGG | - | chr3.3:69209397-69209416 | MS.gene25706:intron | 35.0% | |
| GTCAAAAAGATCAGCCATTA+GGG | + | chr3.3:69209969-69209988 | None:intergenic | 35.0% | |
| GTGCCTTCAAGATATAGTTA+AGG | + | chr3.3:69211177-69211196 | None:intergenic | 35.0% | |
| TAAGGACAATGCATGTATAG+TGG | - | chr3.3:69208485-69208504 | MS.gene25706:CDS | 35.0% | |
| TACTGAAAAATAGAGGTGGA+AGG | + | chr3.3:69210083-69210102 | None:intergenic | 35.0% | |
| TACTTAGACAGCAATGGAAA+GGG | + | chr3.3:69210672-69210691 | None:intergenic | 35.0% | |
| TCAAAAAGATCAGCCATTAG+GGG | + | chr3.3:69209968-69209987 | None:intergenic | 35.0% | |
| TCATCAGTGACACATAACTA+TGG | - | chr3.3:69209767-69209786 | MS.gene25706:intron | 35.0% | |
| TGAGTTTAATCTTCCCCTAA+TGG | - | chr3.3:69209952-69209971 | MS.gene25706:intron | 35.0% | |
| TGGATACTGAAAAATAGAGG+TGG | + | chr3.3:69210087-69210106 | None:intergenic | 35.0% | |
| TGTCAAAAAGATCAGCCATT+AGG | + | chr3.3:69209970-69209989 | None:intergenic | 35.0% | |
| TGTCAGATGGAATACGTTTA+AGG | - | chr3.3:69207910-69207929 | MS.gene25706:intron | 35.0% | |
| TGTCTGATGGAATACGTTTA+AGG | - | chr3.3:69208467-69208486 | MS.gene25706:CDS | 35.0% | |
| TGTCTGTCTCATCTAAATAC+TGG | - | chr3.3:69208902-69208921 | MS.gene25706:CDS | 35.0% | |
| TTACTTAGACAGCAATGGAA+AGG | + | chr3.3:69210673-69210692 | None:intergenic | 35.0% | |
| TTAGTTGTAGACTTGGAGAA+TGG | - | chr3.3:69211497-69211516 | MS.gene25706:intron | 35.0% | |
| TTTAACAAATCTAATCGCGC+CGG | + | chr3.3:69207117-69207136 | None:intergenic | 35.0% | |
| TTTCCATCTAAACTTGCAGA+AGG | + | chr3.3:69209860-69209879 | None:intergenic | 35.0% | |
| TTTCTAATACACATGGACAG+AGG | - | chr3.3:69210795-69210814 | MS.gene25706:intron | 35.0% | |
| TTTGCTCGAGTGTTAGTAAA+TGG | - | chr3.3:69209358-69209377 | MS.gene25706:intron | 35.0% | |
| ! | ATTGTCTGCATTTTCTTTCC+CGG | + | chr3.3:69210351-69210370 | None:intergenic | 35.0% |
| ! | CAATCTACATTTAGGACATC+AGG | + | chr3.3:69208409-69208428 | None:intergenic | 35.0% |
| ! | CCAAGAAAAATGCTAGTTTC+TGG | - | chr3.3:69208778-69208797 | MS.gene25706:intron | 35.0% |
| ! | CCAGAAACTAGCATTTTTCT+TGG | + | chr3.3:69208781-69208800 | None:intergenic | 35.0% |
| ! | CCTTTTCTTTGATTATCACG+TGG | + | chr3.3:69210107-69210126 | None:intergenic | 35.0% |
| ! | GTGTTTTACTTAGACAGCAA+TGG | + | chr3.3:69210678-69210697 | None:intergenic | 35.0% |
| ! | TAAGGACAATGCATGTTTTG+TGG | - | chr3.3:69207928-69207947 | MS.gene25706:intron | 35.0% |
| ! | TTTGATTTAGAGAGGTGCAT+TGG | - | chr3.3:69211575-69211594 | MS.gene25706:intron | 35.0% |
| !! | GCGCGATTAGATTTGTTAAA+AGG | - | chr3.3:69207117-69207136 | MS.gene25706:intron | 35.0% |
| !! | GGATGAATTTGCTTTTGAGA+AGG | + | chr3.3:69208748-69208767 | None:intergenic | 35.0% |
| AAACAATCAGCTTTCCATCC+AGG | + | chr3.3:69210891-69210910 | None:intergenic | 40.0% | |
| AACACTTTCAGCGATAACAG+AGG | + | chr3.3:69210406-69210425 | None:intergenic | 40.0% | |
| AAGTTAGTCCTCGAATCACA+AGG | + | chr3.3:69208448-69208467 | None:intergenic | 40.0% | |
| ACAATGTTGACCTTGAAGTG+GGG | - | chr3.3:69211890-69211909 | MS.gene25706:CDS | 40.0% | |
| ACAGGACACTCGAGAAATAT+AGG | + | chr3.3:69208885-69208904 | None:intergenic | 40.0% | |
| ACCAACATTGTATCTTTCGG+AGG | - | chr3.3:69207989-69208008 | MS.gene25706:CDS | 40.0% | |
| ACCAGACTCGTCCAAAAATA+TGG | - | chr3.3:69208630-69208649 | MS.gene25706:intron | 40.0% | |
| ACCTTCCTAGATAAAGAGAG+AGG | - | chr3.3:69209303-69209322 | MS.gene25706:intron | 40.0% | |
| ACTCATGACCCTTGAAATCA+AGG | + | chr3.3:69211051-69211070 | None:intergenic | 40.0% | |
| ACTTGTGAGACTGTTTGGAT+TGG | + | chr3.3:69207492-69207511 | None:intergenic | 40.0% | |
| AGAACAACAACTACCTCTTC+CGG | - | chr3.3:69207095-69207114 | MS.gene25706:intron | 40.0% | |
| AGGGGAAGATTAAACTCATG+TGG | + | chr3.3:69209950-69209969 | None:intergenic | 40.0% | |
| AGGTGGAAGGATCATATACA+TGG | + | chr3.3:69210070-69210089 | None:intergenic | 40.0% | |
| ATCGAACTGATAACTGTTGC+AGG | - | chr3.3:69209707-69209726 | MS.gene25706:intron | 40.0% | |
| ATGACCAACGCTGTATCTTT+CGG | - | chr3.3:69208543-69208562 | MS.gene25706:CDS | 40.0% | |
| ATGTGCCTCTCTCTTTATCT+AGG | + | chr3.3:69209311-69209330 | None:intergenic | 40.0% | |
| CAAACACTTGTGAGACTGTT+TGG | + | chr3.3:69207497-69207516 | None:intergenic | 40.0% | |
| CAATTCGTCTTCCTCATTTC+AGG | - | chr3.3:69207243-69207262 | MS.gene25706:intron | 40.0% | |
| CACATGAGAATTACTTTCCC+GGG | - | chr3.3:69210330-69210349 | MS.gene25706:intron | 40.0% | |
| CTCATTTAGCAAGTATACCG+AGG | - | chr3.3:69210918-69210937 | MS.gene25706:intron | 40.0% | |
| CTCGTACAAGCTAAAGGAAT+GGG | - | chr3.3:69211811-69211830 | MS.gene25706:intron | 40.0% | |
| GACAATGTTGACCTTGAAGT+GGG | - | chr3.3:69211889-69211908 | MS.gene25706:CDS | 40.0% | |
| GATTTCAAGGGTCATGAGTA+AGG | - | chr3.3:69211052-69211071 | MS.gene25706:intron | 40.0% | |
| GCCTGCAAGTAAAGAAAGTT+AGG | - | chr3.3:69211429-69211448 | MS.gene25706:intron | 40.0% | |
| GGGAAAGAAAATGCAGACAA+TGG | - | chr3.3:69210350-69210369 | MS.gene25706:intron | 40.0% | |
| GGTATAACATTGTGGTTTCC+TGG | - | chr3.3:69210445-69210464 | MS.gene25706:intron | 40.0% | |
| GTATCTTTCGGTGGCTAATT+TGG | - | chr3.3:69208555-69208574 | MS.gene25706:intron | 40.0% | |
| TAAGCTATCTTGGAGAGCTT+AGG | - | chr3.3:69207372-69207391 | MS.gene25706:intron | 40.0% | |
| TACAGACTAGGAGTTAGAAG+AGG | + | chr3.3:69209051-69209070 | None:intergenic | 40.0% | |
| TATATCCCATTTGCCAGAGA+CGG | - | chr3.3:69210157-69210176 | MS.gene25706:CDS | 40.0% | |
| TCAACATTGTCGCAAACTCT+TGG | + | chr3.3:69211880-69211899 | None:intergenic | 40.0% | |
| TCGTACAAGCTAAAGGAATG+GGG | - | chr3.3:69211812-69211831 | MS.gene25706:intron | 40.0% | |
| TCTCGAAGATGATGACATAG+TGG | - | chr3.3:69209883-69209902 | MS.gene25706:intron | 40.0% | |
| TCTCGTACAAGCTAAAGGAA+TGG | - | chr3.3:69211810-69211829 | MS.gene25706:intron | 40.0% | |
| TGTTCTCCATGCTACATTTC+AGG | - | chr3.3:69208941-69208960 | MS.gene25706:CDS | 40.0% | |
| TTCTCCAAAAAGTTGCAAGC+TGG | - | chr3.3:69210605-69210624 | MS.gene25706:intron | 40.0% | |
| TTGGAGCACATAACTCATTG+AGG | - | chr3.3:69210424-69210443 | MS.gene25706:intron | 40.0% | |
| ! | AGATAAAGAGAGAGGCACAT+GGG | - | chr3.3:69209311-69209330 | MS.gene25706:intron | 40.0% |
| ! | ATAATGGAAATTACGCCCTG+AGG | + | chr3.3:69207954-69207973 | None:intergenic | 40.0% |
| ! | ATTCTTACTCAGGCACTGTT+TGG | - | chr3.3:69207293-69207312 | MS.gene25706:intron | 40.0% |
| ! | TAGATAAAGAGAGAGGCACA+TGG | - | chr3.3:69209310-69209329 | MS.gene25706:intron | 40.0% |
| ! | TCTGTTATCGCTGAAAGTGT+TGG | - | chr3.3:69210405-69210424 | MS.gene25706:intron | 40.0% |
| ! | TGATCTTTTTGACAACCTCC+TGG | - | chr3.3:69209976-69209995 | MS.gene25706:intron | 40.0% |
| ! | TTAGAGAGGTGCATTGGATT+GGG | - | chr3.3:69211581-69211600 | MS.gene25706:intron | 40.0% |
| ! | TTGAGGACTAACTTGTCAGA+TGG | - | chr3.3:69207897-69207916 | MS.gene25706:intron | 40.0% |
| ! | TTGTCTGCATTTTCTTTCCC+GGG | + | chr3.3:69210350-69210369 | None:intergenic | 40.0% |
| ! | TTTAGAGAGGTGCATTGGAT+TGG | - | chr3.3:69211580-69211599 | MS.gene25706:intron | 40.0% |
| !! | ACTAGCATTTTTCTTGGTGC+AGG | + | chr3.3:69208775-69208794 | None:intergenic | 40.0% |
| !! | ATTTTTCTTGGTGCAGGTAC+CGG | + | chr3.3:69208769-69208788 | None:intergenic | 40.0% |
| !! | TAGAAGAGGCACTCATGAAT+TGG | + | chr3.3:69209037-69209056 | None:intergenic | 40.0% |
| !!! | TTTCATTTTTTGGGGTTGGG+AGG | - | chr3.3:69210747-69210766 | MS.gene25706:CDS | 40.0% |
| AACAACCGTCTCTGGCAAAT+GGG | + | chr3.3:69210165-69210184 | None:intergenic | 45.0% | |
| AATGCATGTATAGTGGCCTC+AGG | - | chr3.3:69208492-69208511 | MS.gene25706:CDS | 45.0% | |
| ACAAAACCACGCTACCAACA+AGG | - | chr3.3:69206978-69206997 | MS.gene25706:CDS | 45.0% | |
| ACAATGGAAATTACGCCCTG+AGG | + | chr3.3:69208511-69208530 | None:intergenic | 45.0% | |
| ACACATAACTATGGGCACAC+TGG | - | chr3.3:69209776-69209795 | MS.gene25706:intron | 45.0% | |
| ACTTCAATGAGGGTGACAAC+CGG | - | chr3.3:69208144-69208163 | MS.gene25706:intron | 45.0% | |
| AGATGAGGAGGTTGAAATGC+CGG | - | chr3.3:69207559-69207578 | MS.gene25706:intron | 45.0% | |
| AGCTTCAGTTTCAGAAGGCT+CGG | + | chr3.3:69209924-69209943 | None:intergenic | 45.0% | |
| AGGCCTTCTGCAAGTTTAGA+TGG | - | chr3.3:69209854-69209873 | MS.gene25706:intron | 45.0% | |
| ATGCATGTATAGTGGCCTCA+GGG | - | chr3.3:69208493-69208512 | MS.gene25706:CDS | 45.0% | |
| CAAGCTAAAGGAATGGGGTT+TGG | - | chr3.3:69211817-69211836 | MS.gene25706:intron | 45.0% | |
| CCTCAAGGCCTTGATTTCAA+GGG | - | chr3.3:69211040-69211059 | MS.gene25706:intron | 45.0% | |
| CCTTGAAATCAAGGCCTTGA+GGG | + | chr3.3:69211042-69211061 | None:intergenic | 45.0% | |
| CGACAATGTTGACCTTGAAG+TGG | - | chr3.3:69211888-69211907 | MS.gene25706:CDS | 45.0% | |
| CGGATCATCAAGTGACAATG+AGG | - | chr3.3:69210217-69210236 | MS.gene25706:CDS | 45.0% | |
| CTGGATAAGACTGATCTGGT+GGG | - | chr3.3:69209995-69210014 | MS.gene25706:intron | 45.0% | |
| GAAATGCCGGACTTCAATGA+GGG | - | chr3.3:69208134-69208153 | MS.gene25706:intron | 45.0% | |
| GCAGGCGATGCAAAAAGAAA+AGG | - | chr3.3:69210568-69210587 | MS.gene25706:intron | 45.0% | |
| GCCTCCGAAAGATACAATGT+TGG | + | chr3.3:69207993-69208012 | None:intergenic | 45.0% | |
| GCCTCTCTCTTTATCTAGGA+AGG | + | chr3.3:69209307-69209326 | None:intergenic | 45.0% | |
| GGTGACAACCGGAATGAATT+GGG | - | chr3.3:69208155-69208174 | MS.gene25706:intron | 45.0% | |
| TAAGCGTGAACGAACCTTGT+TGG | + | chr3.3:69206995-69207014 | None:intergenic | 45.0% | |
| TATCCTAGAATGCACCCTCA+AGG | - | chr3.3:69211025-69211044 | MS.gene25706:intron | 45.0% | |
| TCAGAAGTTGCTCGAAGATG+AGG | - | chr3.3:69208106-69208125 | MS.gene25706:intron | 45.0% | |
| TGAAATGCCGGACTTCAATG+AGG | - | chr3.3:69208133-69208152 | MS.gene25706:intron | 45.0% | |
| TGATAACTGTTGCAGGCATC+TGG | - | chr3.3:69209714-69209733 | MS.gene25706:intron | 45.0% | |
| TGGAGAATGGAGACTCATGA+TGG | - | chr3.3:69211510-69211529 | MS.gene25706:intron | 45.0% | |
| TTGCAGGCTGCAGCTTATAA+TGG | + | chr3.3:69211417-69211436 | None:intergenic | 45.0% | |
| TTGTCACCCTCATTGAAGTC+CGG | + | chr3.3:69208143-69208162 | None:intergenic | 45.0% | |
| ! | AATGCATGTTTTGTGGCCTC+AGG | - | chr3.3:69207935-69207954 | MS.gene25706:intron | 45.0% |
| ! | AGCTCCAGCTTGCAACTTTT+TGG | + | chr3.3:69210612-69210631 | None:intergenic | 45.0% |
| ! | AGGCATCTGGAACAAAGCTA+AGG | - | chr3.3:69209727-69209746 | MS.gene25706:intron | 45.0% |
| ! | ATCTTGCTGTACGTGCAGTT+TGG | - | chr3.3:69209535-69209554 | MS.gene25706:intron | 45.0% |
| ! | ATGCATGTTTTGTGGCCTCA+GGG | - | chr3.3:69207936-69207955 | MS.gene25706:intron | 45.0% |
| ! | GAAGCATTTCGTGCAACCTA+TGG | + | chr3.3:69210959-69210978 | None:intergenic | 45.0% |
| ! | GTATCTTTCGGAGGCTAGTT+TGG | - | chr3.3:69207998-69208017 | MS.gene25706:CDS | 45.0% |
| ! | TCGAGGACTAACTTGTCTGA+TGG | - | chr3.3:69208454-69208473 | MS.gene25706:CDS | 45.0% |
| !! | TGCTTTTGAGAAGGTCGCAT+GGG | + | chr3.3:69208739-69208758 | None:intergenic | 45.0% |
| !! | TTGCTTTTGAGAAGGTCGCA+TGG | + | chr3.3:69208740-69208759 | None:intergenic | 45.0% |
| !!! | GCCATATTTTTGGACGAGTC+TGG | + | chr3.3:69208634-69208653 | None:intergenic | 45.0% |
| AAATCTAATCGCGCCGGAAG+AGG | + | chr3.3:69207111-69207130 | None:intergenic | 50.0% | |
| ACCAACGCTGTATCTTTCGG+TGG | - | chr3.3:69208546-69208565 | MS.gene25706:intron | 50.0% | |
| ATCCGCTATCCACAGGTTCA+GGG | + | chr3.3:69210202-69210221 | None:intergenic | 50.0% | |
| CAACAACCGTCTCTGGCAAA+TGG | + | chr3.3:69210166-69210185 | None:intergenic | 50.0% | |
| CAACCGGAATGAATTGGGAG+AGG | - | chr3.3:69208160-69208179 | MS.gene25706:intron | 50.0% | |
| CCACCTCTCCCAATTCATTC+CGG | + | chr3.3:69208166-69208185 | None:intergenic | 50.0% | |
| CCCTCAAGGCCTTGATTTCA+AGG | - | chr3.3:69211039-69211058 | MS.gene25706:intron | 50.0% | |
| CCCTTGAAATCAAGGCCTTG+AGG | + | chr3.3:69211043-69211062 | None:intergenic | 50.0% | |
| CCTCCTGGATAAGACTGATC+TGG | - | chr3.3:69209991-69210010 | MS.gene25706:intron | 50.0% | |
| CCTGGATAAGACTGATCTGG+TGG | - | chr3.3:69209994-69210013 | MS.gene25706:intron | 50.0% | |
| GAAATGCCGGACTTCAACGA+GGG | - | chr3.3:69207572-69207591 | MS.gene25706:intron | 50.0% | |
| GAAGTTGCTCGAAGATGAGG+AGG | - | chr3.3:69208109-69208128 | MS.gene25706:intron | 50.0% | |
| GATAAGACTGATCTGGTGGG+TGG | - | chr3.3:69209998-69210017 | MS.gene25706:intron | 50.0% | |
| GCTAAAGGAATGGGGTTTGG+TGG | - | chr3.3:69211820-69211839 | MS.gene25706:intron | 50.0% | |
| GGACGAGCTTCAGTTTCAGA+AGG | + | chr3.3:69209929-69209948 | None:intergenic | 50.0% | |
| GGATTAAGCTCCCCACTTCA+AGG | + | chr3.3:69211903-69211922 | None:intergenic | 50.0% | |
| GGGTGACAACCGGAATGAAT+TGG | - | chr3.3:69208154-69208173 | MS.gene25706:intron | 50.0% | |
| GGTGACAACCGCGATGTATT+GGG | - | chr3.3:69207593-69207612 | MS.gene25706:intron | 50.0% | |
| TCACTGTCAACAACCGTCTC+TGG | + | chr3.3:69210173-69210192 | None:intergenic | 50.0% | |
| TCAGAAGTCGCTCGAAGATG+AGG | - | chr3.3:69207544-69207563 | MS.gene25706:intron | 50.0% | |
| TGAAATGCCGGACTTCAACG+AGG | - | chr3.3:69207571-69207590 | MS.gene25706:intron | 50.0% | |
| TTGTCACCCTCGTTGAAGTC+CGG | + | chr3.3:69207581-69207600 | None:intergenic | 50.0% | |
| ! | CCACCAGATCAGTCTTATCC+AGG | + | chr3.3:69209997-69210016 | None:intergenic | 50.0% |
| ! | CCAGATCAGTCTTATCCAGG+AGG | + | chr3.3:69209994-69210013 | None:intergenic | 50.0% |
| ! | CTTGATGATCCGCTATCCAC+AGG | + | chr3.3:69210209-69210228 | None:intergenic | 50.0% |
| !! | AACGAACCTTGTTGGTAGCG+TGG | + | chr3.3:69206987-69207006 | None:intergenic | 50.0% |
| CAACCGCGATGTATTGGGAG+AGG | - | chr3.3:69207598-69207617 | MS.gene25706:intron | 55.0% | |
| CAAGCTGGAGCTAGACCAGA+TGG | - | chr3.3:69210620-69210639 | MS.gene25706:intron | 55.0% | |
| CCACCTCTCCCAATACATCG+CGG | + | chr3.3:69207604-69207623 | None:intergenic | 55.0% | |
| CCGGAATGAATTGGGAGAGG+TGG | - | chr3.3:69208163-69208182 | MS.gene25706:intron | 55.0% | |
| GAAGTCGCTCGAAGATGAGG+AGG | - | chr3.3:69207547-69207566 | MS.gene25706:intron | 55.0% | |
| GATCCGCTATCCACAGGTTC+AGG | + | chr3.3:69210203-69210222 | None:intergenic | 55.0% | |
| GCCACCGAAAGATACAGCGT+TGG | + | chr3.3:69208550-69208569 | None:intergenic | 55.0% | |
| GGGTGACAACCGCGATGTAT+TGG | - | chr3.3:69207592-69207611 | MS.gene25706:intron | 55.0% | |
| TCCCCTGAACCTGTGGATAG+CGG | - | chr3.3:69210197-69210216 | MS.gene25706:CDS | 55.0% | |
| TCCGCTATCCACAGGTTCAG+GGG | + | chr3.3:69210201-69210220 | None:intergenic | 55.0% | |
| TTTGGACGAGTCTGGTCGAG+AGG | + | chr3.3:69208626-69208645 | None:intergenic | 55.0% | |
| ! | AGGCCTTGAGGGTGCATTCT+AGG | + | chr3.3:69211031-69211050 | None:intergenic | 55.0% |
| ! | GGGAGAGGTGGTTGCTGATT+CGG | - | chr3.3:69207613-69207632 | MS.gene25706:intron | 55.0% |
| !! | GGGTTTGGTGGCAGCAAAGA+TGG | - | chr3.3:69211832-69211851 | MS.gene25706:intron | 55.0% |
| CCGCGATGTATTGGGAGAGG+TGG | - | chr3.3:69207601-69207620 | MS.gene25706:intron | 60.0% | |
| TGACGACTCCCCTGAACCTG+TGG | - | chr3.3:69210190-69210209 | MS.gene25706:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 69206944 | 69211938 | 69206944 | ID=MS.gene25706 |
| chr3.3 | mRNA | 69206944 | 69211938 | 69206944 | ID=MS.gene25706.t1;Parent=MS.gene25706 |
| chr3.3 | exon | 69211883 | 69211938 | 69211883 | ID=MS.gene25706.t1.exon1;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69211883 | 69211938 | 69211883 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69211744 | 69211795 | 69211744 | ID=MS.gene25706.t1.exon2;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69211744 | 69211795 | 69211744 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69211618 | 69211655 | 69211618 | ID=MS.gene25706.t1.exon3;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69211618 | 69211655 | 69211618 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69211218 | 69211331 | 69211218 | ID=MS.gene25706.t1.exon4;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69211218 | 69211331 | 69211218 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69210656 | 69210772 | 69210656 | ID=MS.gene25706.t1.exon5;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69210656 | 69210772 | 69210656 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69210114 | 69210270 | 69210114 | ID=MS.gene25706.t1.exon6;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69210114 | 69210270 | 69210114 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69208870 | 69209153 | 69208870 | ID=MS.gene25706.t1.exon7;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69208870 | 69209153 | 69208870 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69208644 | 69208781 | 69208644 | ID=MS.gene25706.t1.exon8;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69208644 | 69208781 | 69208644 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69208437 | 69208564 | 69208437 | ID=MS.gene25706.t1.exon9;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69208437 | 69208564 | 69208437 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69208241 | 69208338 | 69208241 | ID=MS.gene25706.t1.exon10;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69208241 | 69208338 | 69208241 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69207943 | 69208034 | 69207943 | ID=MS.gene25706.t1.exon11;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69207943 | 69208034 | 69207943 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| chr3.3 | exon | 69206944 | 69207077 | 69206944 | ID=MS.gene25706.t1.exon12;Parent=MS.gene25706.t1 |
| chr3.3 | CDS | 69206944 | 69207077 | 69206944 | ID=cds.MS.gene25706.t1;Parent=MS.gene25706.t1 |
| Gene Sequence |
| Protein sequence |
