AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25860.t1 MTR_6g034285 63.636 286 55 6 17 302 120 356 5.97e-111 335
MS.gene25860.t1 MTR_1g015450 83.333 132 20 2 374 503 381 512 7.51e-58 207
MS.gene25860.t1 MTR_1g015480 75.758 132 30 2 374 503 199 330 7.15e-51 186
MS.gene25860.t1 MTR_5g012460 90.000 90 9 0 97 186 151 240 1.87e-50 179
MS.gene25860.t1 MTR_3g116110 80.282 71 13 1 28 97 148 218 3.77e-31 121
MS.gene25860.t1 MTR_3g117100 57.778 90 38 0 97 186 146 235 1.80e-27 116
MS.gene25860.t1 MTR_1g022480 58.889 90 37 0 97 186 64 153 3.13e-27 115
MS.gene25860.t1 MTR_1g022480 58.889 90 37 0 97 186 148 237 4.20e-27 115
MS.gene25860.t1 MTR_1g022480 58.889 90 37 0 97 186 148 237 4.47e-27 115
MS.gene25860.t1 MTR_1g022480 58.889 90 37 0 97 186 148 237 4.94e-27 115
MS.gene25860.t1 MTR_3g112150 56.667 90 39 0 97 186 129 218 8.51e-27 114
MS.gene25860.t1 MTR_4g070810 55.556 90 40 0 97 186 143 232 2.51e-26 113
MS.gene25860.t1 MTR_5g021050 53.846 91 42 0 96 186 111 201 3.56e-25 108
MS.gene25860.t1 MTR_5g021050 53.846 91 42 0 96 186 111 201 3.74e-25 108
MS.gene25860.t1 MTR_6g015645 54.444 90 41 0 97 186 8 97 1.54e-24 106
MS.gene25860.t1 MTR_7g056587 51.111 90 44 0 97 186 144 233 1.65e-23 104
MS.gene25860.t1 MTR_7g056587 51.111 90 44 0 97 186 136 225 1.83e-23 104
MS.gene25860.t1 MTR_7g056587 51.111 90 44 0 97 186 19 108 1.91e-23 103
MS.gene25860.t1 MTR_7g056587 51.111 90 44 0 97 186 158 247 2.07e-23 104
MS.gene25860.t1 MTR_7g056587 51.111 90 44 0 97 186 144 233 2.26e-23 104
MS.gene25860.t1 MTR_3g117090 57.500 80 34 0 107 186 143 222 9.84e-23 102
MS.gene25860.t1 MTR_3g117090 57.500 80 34 0 107 186 143 222 1.20e-22 102
MS.gene25860.t1 MTR_4g070720 58.974 78 32 0 109 186 144 221 3.10e-22 100
MS.gene25860.t1 MTR_8g076880 53.947 76 35 0 111 186 129 204 5.38e-22 99.8
MS.gene25860.t1 MTR_3g090540 82.456 57 9 1 321 376 474 530 9.11e-22 99.4
MS.gene25860.t1 MTR_4g070790 46.667 90 48 0 97 186 120 209 4.19e-21 95.9
MS.gene25860.t1 MTR_2g014020 87.755 49 6 0 187 235 186 234 1.09e-19 91.7
MS.gene25860.t1 MTR_2g014020 87.755 49 6 0 187 235 186 234 3.21e-19 91.3
MS.gene25860.t1 MTR_4g070780 45.882 85 46 0 103 187 75 159 3.95e-19 90.1
MS.gene25860.t1 MTR_3g010190 52.500 80 38 0 107 186 148 227 1.47e-18 89.0
MS.gene25860.t1 MTR_8g071000 52.632 76 36 0 111 186 140 215 2.01e-18 89.0
MS.gene25860.t1 MTR_4g075480 93.939 33 2 0 1 33 1 33 1.08e-12 68.9
MS.gene25860.t1 MTR_4g075480 93.939 33 2 0 1 33 29 61 2.12e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25860.t1 AT4G33210 64.615 130 44 1 374 501 390 519 9.04e-38 148
MS.gene25860.t1 AT5G47510 58.889 90 37 0 97 186 30 119 3.96e-31 123
MS.gene25860.t1 AT5G47510 58.889 90 37 0 97 186 87 176 4.93e-31 123
MS.gene25860.t1 AT5G47510 58.889 90 37 0 97 186 86 175 9.69e-31 123
MS.gene25860.t1 AT5G47510 58.889 90 37 0 97 186 87 176 1.01e-30 123
MS.gene25860.t1 AT1G19650 55.556 90 40 0 97 186 140 229 1.34e-26 112
MS.gene25860.t1 AT4G34580 55.556 90 40 0 97 186 124 213 1.53e-26 113
MS.gene25860.t1 AT4G34580 55.556 90 40 0 97 186 124 213 1.53e-26 113
MS.gene25860.t1 AT1G19650 55.556 90 40 0 97 186 68 157 2.50e-26 112
MS.gene25860.t1 AT1G19650 55.556 90 40 0 97 186 140 229 2.74e-26 113
MS.gene25860.t1 AT4G39180 54.444 90 41 0 97 186 132 221 7.72e-26 111
MS.gene25860.t1 AT4G39180 54.444 90 41 0 97 186 132 221 7.72e-26 111
MS.gene25860.t1 AT4G39180 54.444 90 41 0 97 186 132 221 8.43e-26 111
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.57e-25 109
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.57e-25 109
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.60e-25 110
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.60e-25 110
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.60e-25 110
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.60e-25 109
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.60e-25 109
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.60e-25 109
MS.gene25860.t1 AT2G21540 54.444 90 41 0 97 186 131 220 2.60e-25 109
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.61e-25 110
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.61e-25 110
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.61e-25 110
MS.gene25860.t1 AT3G24840 54.444 90 41 0 97 186 139 228 2.61e-25 110
MS.gene25860.t1 AT4G36490 54.444 90 41 0 97 186 114 203 3.43e-25 109
MS.gene25860.t1 AT4G39170 47.009 117 57 3 71 186 121 233 6.95e-25 108
MS.gene25860.t1 AT4G39170 47.009 117 57 3 71 186 121 233 7.17e-25 108
MS.gene25860.t1 AT2G18180 53.333 90 42 0 97 186 19 108 1.05e-24 107
MS.gene25860.t1 AT2G18180 53.333 90 42 0 97 186 46 135 1.08e-24 107
MS.gene25860.t1 AT1G76450 63.514 74 25 1 24 97 153 224 1.13e-24 103
MS.gene25860.t1 AT2G18180 53.333 90 42 0 97 186 46 135 1.14e-24 107
MS.gene25860.t1 AT2G18180 53.333 90 42 0 97 186 117 206 1.54e-24 107
MS.gene25860.t1 AT2G18180 53.333 90 42 0 97 186 117 206 1.57e-24 107
MS.gene25860.t1 AT2G16380 52.222 90 43 0 97 186 19 108 3.32e-24 105
MS.gene25860.t1 AT2G16380 52.222 90 43 0 97 186 124 213 4.33e-24 106
MS.gene25860.t1 AT2G16380 52.222 90 43 0 97 186 124 213 4.33e-24 106
MS.gene25860.t1 AT1G75370 60.000 80 32 0 107 186 159 238 1.36e-23 105
MS.gene25860.t1 AT1G75370 60.000 80 32 0 107 186 159 238 1.40e-23 105
MS.gene25860.t1 AT2G21520 45.545 101 54 1 87 186 139 239 4.61e-23 103
MS.gene25860.t1 AT2G21520 45.545 101 54 1 87 186 139 239 4.61e-23 103
MS.gene25860.t1 AT2G21520 45.545 101 54 1 87 186 135 235 5.57e-23 103
MS.gene25860.t1 AT5G56160 47.619 105 52 1 97 201 130 231 1.62e-22 100
MS.gene25860.t1 AT5G56160 47.619 105 52 1 97 201 130 231 2.23e-22 101
MS.gene25860.t1 AT5G56160 47.619 105 52 1 97 201 130 231 2.23e-22 101
MS.gene25860.t1 AT1G55690 55.263 76 34 0 111 186 151 226 4.64e-19 90.9
MS.gene25860.t1 AT1G55690 55.263 76 34 0 111 186 151 226 4.97e-19 90.9
MS.gene25860.t1 AT1G55690 55.263 76 34 0 111 186 151 226 4.97e-19 90.9
MS.gene25860.t1 AT1G55690 55.263 76 34 0 111 186 151 226 4.97e-19 90.9
MS.gene25860.t1 AT1G55690 55.263 76 34 0 111 186 151 226 4.97e-19 90.9

Find 103 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTAAACTGCTTCCATTTA+AGG 0.088576 3.2:-69927562 MS.gene25860:CDS
TGCTATCCTCATGGATTCTA+TGG 0.142346 3.2:-69929545 MS.gene25860:CDS
TCTCCACTTGGACCCTTAAA+TGG 0.191266 3.2:+69927549 None:intergenic
AAACATCTATATTCAGCTTT+TGG 0.193494 3.2:-69929728 MS.gene25860:CDS
ATAGATGATTGGGTGAAAAT+TGG 0.260892 3.2:-69927024 MS.gene25860:CDS
AATGGAAGCAGTTTAACTTT+AGG 0.275163 3.2:+69927567 None:intergenic
TGGAGTAATGGTCCATTATC+AGG 0.275520 3.2:+69926834 None:intergenic
AATGGTCCATTATCAGGTTT+TGG 0.292685 3.2:+69926840 None:intergenic
GTTAAACTGCTTCCATTTAA+GGG 0.303011 3.2:-69927561 MS.gene25860:CDS
GTTATTCCAAAACCTGATAA+TGG 0.309077 3.2:-69926846 MS.gene25860:CDS
GGTGGATGCTATGTGTCTTT+TGG 0.323985 3.2:+69929364 None:intergenic
AGCAATCTAAAACGAATTTC+AGG 0.326894 3.2:-69927801 MS.gene25860:CDS
GAGAGTAGAAATCAGAATAA+AGG 0.353001 3.2:-69927774 MS.gene25860:intron
GCGCATCATTTCCCTAATCT+TGG 0.360787 3.2:-69926209 MS.gene25860:CDS
GCATCAAGAAAACCAAGATT+AGG 0.372424 3.2:+69926197 None:intergenic
GGAAAACCCTTCAGACTATC+AGG 0.373502 3.2:-69927523 MS.gene25860:intron
GATCCTTCCTTAACTCTTCT+CGG 0.392642 3.2:+69930201 None:intergenic
ATACTGCCCAAGCATATCTT+TGG 0.400258 3.2:-69926171 MS.gene25860:CDS
TGTGGCAGACCTGTGTATAT+CGG 0.403396 3.2:-69929512 MS.gene25860:CDS
GCCTTCTGTGTCTTTCTAGC+AGG 0.403457 3.2:+69930227 None:intergenic
AATGAAAATGAGTTATTTAG+TGG 0.404423 3.2:-69926572 MS.gene25860:CDS
CATCAAGAAAACCAAGATTA+GGG 0.410489 3.2:+69926198 None:intergenic
CGTCGATCCCTTGGGATAAA+CGG 0.412629 3.2:-69926507 MS.gene25860:CDS
AGCATCCACCACAAGTATCT+TGG 0.414536 3.2:-69929351 MS.gene25860:CDS
AAGATGCTGTTGCAGCATAC+TGG 0.416649 3.2:+69926814 None:intergenic
ATAGATTGTAAATCATATAA+AGG 0.418124 3.2:-69930011 MS.gene25860:intron
GTTTCAGGTTAACTACATCT+TGG 0.423871 3.2:-69926605 MS.gene25860:intron
TTTCAGGTTAACTACATCTT+GGG 0.429290 3.2:-69926604 MS.gene25860:intron
TGCAACTTCATGCCCTCAAC+TGG 0.430503 3.2:-69926288 MS.gene25860:CDS
AAACATAATTGTAGGTGGAT+TGG 0.433774 3.2:-69926868 MS.gene25860:intron
ATCAACCTTAAATAGGTTGT+TGG 0.434701 3.2:-69927174 MS.gene25860:intron
CTAGCAGGTGTAATTTCCAT+TGG 0.438402 3.2:+69930242 None:intergenic
AGGCTGACCGAGAAGAGTTA+AGG 0.447590 3.2:-69930208 MS.gene25860:CDS
ATGCCCTCAACTGGTGAAGC+TGG 0.450963 3.2:-69926279 MS.gene25860:CDS
CGGTACTACAATTGTGATGA+TGG 0.451797 3.2:-69926487 MS.gene25860:intron
GGGCATCACTTCTGCATCAA+TGG 0.456897 3.2:-69926000 MS.gene25860:CDS
GCAGTGACTTCATAGATGAT+TGG 0.458690 3.2:-69927035 MS.gene25860:intron
TAAATAGGTTGTTGGCTACA+TGG 0.459621 3.2:-69927166 MS.gene25860:intron
ATAGAAGTGCGTCGATCCCT+TGG 0.463260 3.2:-69926516 MS.gene25860:CDS
TCTATTGACTTCGGTGTCGT+TGG 0.480572 3.2:-69925837 MS.gene25860:CDS
CACAACTCCAAAGATATGCT+TGG 0.485915 3.2:+69926164 None:intergenic
ACGTATGAAGAATATTAGAT+TGG 0.488147 3.2:-69925807 MS.gene25860:CDS
AACAGACTGTATACAGCGAC+AGG 0.490835 3.2:-69929683 MS.gene25860:CDS
TTAGTGGGTTGGACAGAAGC+TGG 0.491375 3.2:-69930065 MS.gene25860:intron
GTGGCAGACCTGTGTATATC+GGG 0.493831 3.2:-69929511 MS.gene25860:CDS
CTTGATAAGCCTTTCTTGTG+TGG 0.496556 3.2:+69929448 None:intergenic
GAATCCACATTCTCATCTGT+TGG 0.497389 3.2:+69927873 None:intergenic
CTTCTATGATGAACTTGGAC+TGG 0.507668 3.2:+69926532 None:intergenic
CAGTGACTTCATAGATGATT+GGG 0.508975 3.2:-69927034 MS.gene25860:CDS
GGCAAATAACCACACAAGAA+AGG 0.513788 3.2:-69929457 MS.gene25860:CDS
ACGCACTTCTATGATGAACT+TGG 0.517227 3.2:+69926527 None:intergenic
ACAACTCCAAAGATATGCTT+GGG 0.519266 3.2:+69926165 None:intergenic
ATGTCCAGCTTCACCAGTTG+AGG 0.523654 3.2:+69926275 None:intergenic
TAGAAGTGCGTCGATCCCTT+GGG 0.523700 3.2:-69926515 MS.gene25860:CDS
GAGTATACGCTGCAAAGTCC+TGG 0.525909 3.2:-69929761 MS.gene25860:CDS
CAAGTGTCTAACTGCTCCAC+CGG 0.534792 3.2:-69925567 MS.gene25860:CDS
TTGGGATGTTAACAGATGGT+TGG 0.535275 3.2:-69929709 MS.gene25860:CDS
TGGTTTATCTTCCAAAGTCA+AGG 0.539535 3.2:-69927004 MS.gene25860:CDS
TTGGCTGCTAATGAACATGC+AGG 0.545058 3.2:+69929383 None:intergenic
AGCTCATAGCTATATGTTGG+AGG 0.545216 3.2:-69925970 MS.gene25860:intron
CCTGTGTATATCGGGAGAAG+TGG 0.546255 3.2:-69929503 MS.gene25860:CDS
CAATTGCAGTCTATTGACTT+CGG 0.553989 3.2:-69925846 MS.gene25860:CDS
TTGTAGTACCGTTTATCCCA+AGG 0.555321 3.2:+69926499 None:intergenic
AGATGTTTGCGACCCTCACC+AGG 0.558500 3.2:+69929743 None:intergenic
AATAGCTCATAGCTATATGT+TGG 0.564569 3.2:-69925973 MS.gene25860:CDS
ACAAGTATCTTGGATGGCAA+TGG 0.566474 3.2:-69929341 MS.gene25860:CDS
AAAATCACCTGATAGTCTGA+AGG 0.567444 3.2:+69927516 None:intergenic
TAAGGGTCCAAGTGGAGAAG+AGG 0.568996 3.2:-69927544 MS.gene25860:CDS
GCTATCCTCATGGATTCTAT+GGG 0.571745 3.2:-69929544 MS.gene25860:CDS
AATATGACAGGTTAGTGGGT+TGG 0.579569 3.2:-69930076 MS.gene25860:intron
ATGAAAATGAGTTATTTAGT+GGG 0.579900 3.2:-69926571 MS.gene25860:CDS
TTGAAGTGATATTGATCCGG+TGG 0.584608 3.2:+69925551 None:intergenic
ATGAGTTTAGCAGCCACACC+AGG 0.586123 3.2:+69930032 None:intergenic
AATTTGAAGTGATATTGATC+CGG 0.587951 3.2:+69925548 None:intergenic
ACTGTATACAGCGACAGGGC+AGG 0.588449 3.2:-69929678 MS.gene25860:intron
TACGCTGCAAAGTCCTGGTG+AGG 0.589117 3.2:-69929756 MS.gene25860:CDS
AAATCACCTGATAGTCTGAA+GGG 0.590641 3.2:+69927517 None:intergenic
CTGTGTATATCGGGAGAAGT+GGG 0.591652 3.2:-69929502 MS.gene25860:CDS
TGTAGTACCGTTTATCCCAA+GGG 0.591780 3.2:+69926500 None:intergenic
TGTCCAGCTTCACCAGTTGA+GGG 0.593662 3.2:+69926276 None:intergenic
CTAAGGTTTCATAGCTGCGA+GGG 0.602792 3.2:-69926020 MS.gene25860:intron
TGACCGAGAAGAGTTAAGGA+AGG 0.608155 3.2:-69930204 MS.gene25860:CDS
GAATGTGTGGATGCAGCAGA+TGG 0.613326 3.2:-69927900 MS.gene25860:CDS
GTTGCAGCATACTGGAGTAA+TGG 0.618527 3.2:+69926822 None:intergenic
CTTCCATTTAAGGGTCCAAG+TGG 0.631821 3.2:-69927552 MS.gene25860:CDS
TCCACCACAAGTATCTTGGA+TGG 0.634007 3.2:-69929347 MS.gene25860:CDS
ATTGCCATCCAAGATACTTG+TGG 0.634426 3.2:+69929343 None:intergenic
AAAACCAACAGATGAGAATG+TGG 0.635279 3.2:-69927877 MS.gene25860:CDS
TGGCTGCTAATGAACATGCA+GGG 0.635842 3.2:+69929384 None:intergenic
ATACAAACTATAGGAATGTG+TGG 0.637635 3.2:-69927913 MS.gene25860:intron
AATGATGCGCTATTTCACGC+AGG 0.642589 3.2:+69926222 None:intergenic
ATGATGCGCTATTTCACGCA+GGG 0.642738 3.2:+69926223 None:intergenic
TGATCGATGTTAACAAACTG+TGG 0.655361 3.2:-69929478 MS.gene25860:CDS
ACGCTGCAAAGTCCTGGTGA+GGG 0.658427 3.2:-69929755 MS.gene25860:CDS
TTCTATGGGCTTGATAAATG+TGG 0.661800 3.2:-69929530 MS.gene25860:CDS
ACCTGCTAGAAAGACACAGA+AGG 0.670061 3.2:-69930228 MS.gene25860:CDS
CCACTTCTCCCGATATACAC+AGG 0.672428 3.2:+69929503 None:intergenic
GCCATCCAAGATACTTGTGG+TGG 0.681743 3.2:+69929346 None:intergenic
AATCTAATATTCTTCATACG+TGG 0.682538 3.2:+69925809 None:intergenic
AGTTTAGCAGCCACACCAGG+TGG 0.683789 3.2:+69930035 None:intergenic
TCTAAGGTTTCATAGCTGCG+AGG 0.685544 3.2:-69926021 MS.gene25860:intron
TCAAGCCCATAGAATCCATG+AGG 0.727495 3.2:+69929539 None:intergenic
ACAGACTGTATACAGCGACA+GGG 0.731028 3.2:-69929682 MS.gene25860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGATTGTAAATCATATAA+AGG - chr3.2:69925673-69925692 MS.gene25860:intron 15.0%
!! ATATTCATATTAAGCAAAAT+AGG + chr3.2:69925593-69925612 None:intergenic 15.0%
!! GTAAAAATATCTTTGAATAT+TGG + chr3.2:69927502-69927521 None:intergenic 15.0%
!! TATTCATATTAAGCAAAATA+GGG + chr3.2:69925592-69925611 None:intergenic 15.0%
!! TTAATGTTAAACATAATTGT+AGG - chr3.2:69928808-69928827 MS.gene25860:intron 15.0%
!! TTGTTTCATAATTTACTATT+TGG - chr3.2:69926390-69926409 MS.gene25860:intron 15.0%
!!! AAAATAGTTTTGAAAAAATG+TGG + chr3.2:69928272-69928291 None:intergenic 15.0%
!!! AATTTTGAATTTTGTATACT+TGG + chr3.2:69927185-69927204 None:intergenic 15.0%
!!! GTTAATATTTACAGTTTTTA+TGG - chr3.2:69928609-69928628 MS.gene25860:intron 15.0%
!!! TAAGGTTGATTATAAAAAAA+GGG + chr3.2:69928500-69928519 None:intergenic 15.0%
!!! TTAAGGTTGATTATAAAAAA+AGG + chr3.2:69928501-69928520 None:intergenic 15.0%
!!! TTTCTTTTTATTTTGTGAAT+TGG - chr3.2:69927713-69927732 MS.gene25860:intron 15.0%
!!! TTTTATAATCAACCTTAAAT+AGG - chr3.2:69928503-69928522 MS.gene25860:intron 15.0%
!! AATGAAAATGAGTTATTTAG+TGG - chr3.2:69929112-69929131 MS.gene25860:intron 20.0%
!! ATGAAAATGAGTTATTTAGT+GGG - chr3.2:69929113-69929132 MS.gene25860:intron 20.0%
!! ATGTCATTAATATCAATATC+TGG + chr3.2:69929753-69929772 None:intergenic 20.0%
!! CAACAATAGAAAAAAAGATT+TGG + chr3.2:69930014-69930033 None:intergenic 20.0%
!! CCAAATATAATTTCTTTACT+CGG - chr3.2:69926814-69926833 MS.gene25860:CDS 20.0%
!! GAAAAATGAATTAACACAAA+TGG + chr3.2:69927697-69927716 None:intergenic 20.0%
!! GAATAAAGGTAAAATATTCA+TGG - chr3.2:69927924-69927943 MS.gene25860:intron 20.0%
!! GTTAAATAACATTCTAAACT+CGG - chr3.2:69926967-69926986 MS.gene25860:CDS 20.0%
!! TGTCATTAATATCAATATCT+GGG + chr3.2:69929752-69929771 None:intergenic 20.0%
!!! ACTAAATAACTCATTTTCAT+TGG + chr3.2:69929113-69929132 None:intergenic 20.0%
!!! AGAATTATAGTTCTTTTCTT+GGG + chr3.2:69929942-69929961 None:intergenic 20.0%
!!! GTATTTTGAACTAAAGTATA+TGG - chr3.2:69929581-69929600 MS.gene25860:CDS 20.0%
!!! TAGAATTATAGTTCTTTTCT+TGG + chr3.2:69929943-69929962 None:intergenic 20.0%
!!! TTCATATTGATTTTTAGAGT+TGG - chr3.2:69928016-69928035 MS.gene25860:intron 20.0%
! AAATTCATCCCACTATTAAA+GGG + chr3.2:69926757-69926776 None:intergenic 25.0%
! AATATTAAGCATACCTATGT+TGG + chr3.2:69925567-69925586 None:intergenic 25.0%
! AATCTAATATTCTTCATACG+TGG + chr3.2:69929878-69929897 None:intergenic 25.0%
! ACGTATGAAGAATATTAGAT+TGG - chr3.2:69929877-69929896 MS.gene25860:intron 25.0%
! ACTTCTCAAAACTGAATTTA+TGG - chr3.2:69925836-69925855 MS.gene25860:CDS 25.0%
! ACTTTAATGCAATGTAGTTA+AGG - chr3.2:69927138-69927157 MS.gene25860:CDS 25.0%
! AGGGAAAGAAAATATGTTAT+AGG - chr3.2:69925772-69925791 MS.gene25860:intron 25.0%
! ATAATAACATTTAGTCGCAT+TGG - chr3.2:69928382-69928401 MS.gene25860:intron 25.0%
! ATGTTAAACATAATTGTAGG+TGG - chr3.2:69928811-69928830 MS.gene25860:intron 25.0%
! ATTGATCATCTCAAAATATC+CGG - chr3.2:69928919-69928938 MS.gene25860:intron 25.0%
! CCGAGTAAAGAAATTATATT+TGG + chr3.2:69926817-69926836 None:intergenic 25.0%
! CTATATGTTACTATCGAAAA+TGG + chr3.2:69929025-69929044 None:intergenic 25.0%
! CTTCTCAAAACTGAATTTAT+GGG - chr3.2:69925837-69925856 MS.gene25860:CDS 25.0%
! GTGATTGTATTATTCTTCTA+GGG - chr3.2:69926436-69926455 MS.gene25860:intron 25.0%
! GTTGATTATAAAAAAAGGGT+TGG + chr3.2:69928496-69928515 None:intergenic 25.0%
! TGTGATTGTATTATTCTTCT+AGG - chr3.2:69926435-69926454 MS.gene25860:intron 25.0%
! TTATAAGGTTGCAACTATAA+GGG - chr3.2:69925753-69925772 MS.gene25860:intron 25.0%
! TTATTATAACAAATGCGCAA+TGG + chr3.2:69928369-69928388 None:intergenic 25.0%
! TTCAATGGAATACAAACTAT+AGG - chr3.2:69927762-69927781 MS.gene25860:intron 25.0%
! TTGCTTAATATGAATATGAC+AGG - chr3.2:69925596-69925615 MS.gene25860:CDS 25.0%
!! AAACATCTATATTCAGCTTT+TGG - chr3.2:69925956-69925975 MS.gene25860:intron 25.0%
!! AACAATTTCTTTTGACAGAT+TGG - chr3.2:69927319-69927338 MS.gene25860:intron 25.0%
!! AACATCTATATTCAGCTTTT+GGG - chr3.2:69925957-69925976 MS.gene25860:intron 25.0%
!! AATTTGAAGTGATATTGATC+CGG + chr3.2:69930139-69930158 None:intergenic 25.0%
!! ATTTTGCAGTACATGTTATA+AGG - chr3.2:69925738-69925757 MS.gene25860:intron 25.0%
!! CATTTTCGATAGTAACATAT+AGG - chr3.2:69929023-69929042 MS.gene25860:intron 25.0%
!! TTTTATTGTAGCAGATGATT+TGG - chr3.2:69926625-69926644 MS.gene25860:intron 25.0%
!!! AATGAACAATTTTTAGAGCT+GGG - chr3.2:69925511-69925530 MS.gene25860:intron 25.0%
!!! ATTAATTTGCCTCGAAAAAA+TGG - chr3.2:69925881-69925900 MS.gene25860:intron 25.0%
!!! TATTGATTTTTAGAGTTGGT+TGG - chr3.2:69928020-69928039 MS.gene25860:intron 25.0%
!!! TATTGCAAGTTCTGATATTT+TGG - chr3.2:69927532-69927551 MS.gene25860:CDS 25.0%
!!! TCATTTTTTGGTACATAATC+AGG - chr3.2:69926081-69926100 MS.gene25860:intron 25.0%
!!! TTTCGATGTCATTCATTTTT+TGG - chr3.2:69926069-69926088 MS.gene25860:intron 25.0%
AAACATAATTGTAGGTGGAT+TGG - chr3.2:69928816-69928835 MS.gene25860:intron 30.0%
AACAGTCACAAAATAGATAG+TGG + chr3.2:69928225-69928244 None:intergenic 30.0%
AAGTTTCAATCATAGATCCT+AGG - chr3.2:69927368-69927387 MS.gene25860:intron 30.0%
AATAGCTCATAGCTATATGT+TGG - chr3.2:69929711-69929730 MS.gene25860:CDS 30.0%
ACATTGTGCTTCTAACTAAT+TGG - chr3.2:69927986-69928005 MS.gene25860:intron 30.0%
ACCCTAAAACAGGTATTATA+CGG + chr3.2:69928461-69928480 None:intergenic 30.0%
ACTTGCTTTACAATATAGTG+TGG - chr3.2:69927448-69927467 MS.gene25860:intron 30.0%
AGAGAACAAAGATTAGAAGA+CGG + chr3.2:69927743-69927762 None:intergenic 30.0%
AGTTAAACTGCTTCCATTTA+AGG - chr3.2:69928122-69928141 MS.gene25860:intron 30.0%
ATACAAACTATAGGAATGTG+TGG - chr3.2:69927771-69927790 MS.gene25860:intron 30.0%
ATAGATGATTGGGTGAAAAT+TGG - chr3.2:69928660-69928679 MS.gene25860:intron 30.0%
ATATCAAGTTCATGTAGAAG+AGG + chr3.2:69929334-69929353 None:intergenic 30.0%
ATATGAATATGACAGGTTAG+TGG - chr3.2:69925603-69925622 MS.gene25860:CDS 30.0%
ATCAACCTTAAATAGGTTGT+TGG - chr3.2:69928510-69928529 MS.gene25860:intron 30.0%
CAAATTCATCCCACTATTAA+AGG + chr3.2:69926758-69926777 None:intergenic 30.0%
CATCAAGAAAACCAAGATTA+GGG + chr3.2:69929489-69929508 None:intergenic 30.0%
CGATAGTAACATATAGGAAT+TGG - chr3.2:69929029-69929048 MS.gene25860:intron 30.0%
CTAATCTTTGTTCTCTTCAA+TGG - chr3.2:69927747-69927766 MS.gene25860:intron 30.0%
CTAATGTTCCCTTTAATAGT+GGG - chr3.2:69926746-69926765 MS.gene25860:intron 30.0%
CTTCTACATGAACTTGATAT+TGG - chr3.2:69929334-69929353 MS.gene25860:intron 30.0%
GAGAGTAGAAATCAGAATAA+AGG - chr3.2:69927910-69927929 MS.gene25860:intron 30.0%
GTTAAACTGCTTCCATTTAA+GGG - chr3.2:69928123-69928142 MS.gene25860:intron 30.0%
GTTATAAGGTTGCAACTATA+AGG - chr3.2:69925752-69925771 MS.gene25860:intron 30.0%
GTTATTCCAAAACCTGATAA+TGG - chr3.2:69928838-69928857 MS.gene25860:intron 30.0%
TACTATCGAAAATGGTTAGA+AGG + chr3.2:69929017-69929036 None:intergenic 30.0%
TATCAAGTTCATGTAGAAGA+GGG + chr3.2:69929333-69929352 None:intergenic 30.0%
TATCACTTGATTTCAAAGCT+AGG - chr3.2:69927259-69927278 MS.gene25860:intron 30.0%
TATGAATATGACAGGTTAGT+GGG - chr3.2:69925604-69925623 MS.gene25860:CDS 30.0%
TATTATACGAACCCTAAAAC+AGG + chr3.2:69928471-69928490 None:intergenic 30.0%
TCAAGACTAACTTCTACATT+AGG + chr3.2:69929264-69929283 None:intergenic 30.0%
TGAATTAACACAAATGGTGA+TGG + chr3.2:69927691-69927710 None:intergenic 30.0%
TGACAATGTTGACAATTCTA+AGG - chr3.2:69929647-69929666 MS.gene25860:intron 30.0%
TGGAATTATTCATTGCAAGT+TGG + chr3.2:69927671-69927690 None:intergenic 30.0%
! AACAACAGGAACATAGTTTT+TGG + chr3.2:69927220-69927239 None:intergenic 30.0%
! AATGGAAGCAGTTTAACTTT+AGG + chr3.2:69928120-69928139 None:intergenic 30.0%
! AGCAATCTAAAACGAATTTC+AGG - chr3.2:69927883-69927902 MS.gene25860:CDS 30.0%
! AGCCTAAGTGTAGTAATTTT+CGG - chr3.2:69928329-69928348 MS.gene25860:intron 30.0%
! TCAGATTGTTCCAGATTTTA+GGG - chr3.2:69928434-69928453 MS.gene25860:intron 30.0%
! TCCGTATAATACCTGTTTTA+GGG - chr3.2:69928457-69928476 MS.gene25860:intron 30.0%
! TGTGCAAAATTTTACGTTGA+AGG - chr3.2:69927002-69927021 MS.gene25860:CDS 30.0%
! TTTCTAAAGAAAGCACAACA+GGG + chr3.2:69928095-69928114 None:intergenic 30.0%
! TTTTTCACTTCTGTGTATTC+TGG + chr3.2:69926118-69926137 None:intergenic 30.0%
!! ACATTAGGTTGATGTATTTG+AGG + chr3.2:69929249-69929268 None:intergenic 30.0%
!! ATTCGTTTTAGATTGCTGAA+AGG + chr3.2:69927880-69927899 None:intergenic 30.0%
!! CTCTAGAATATAAGAGAATG+AGG + chr3.2:69930200-69930219 None:intergenic 30.0%
!! GCTTATTACAAAGCTTTAGA+CGG - chr3.2:69928042-69928061 MS.gene25860:intron 30.0%
!! TTTCAGGTTAACTACATCTT+GGG - chr3.2:69929080-69929099 MS.gene25860:intron 30.0%
!! TTTTCTAAAGAAAGCACAAC+AGG + chr3.2:69928096-69928115 None:intergenic 30.0%
!!! CAATGAACAATTTTTAGAGC+TGG - chr3.2:69925510-69925529 MS.gene25860:intron 30.0%
!!! TTCTTTTAGAACCTTGACTT+TGG + chr3.2:69928694-69928713 None:intergenic 30.0%
AAAACCAACAGATGAGAATG+TGG - chr3.2:69927807-69927826 MS.gene25860:CDS 35.0%
AAAATCACCTGATAGTCTGA+AGG + chr3.2:69928171-69928190 None:intergenic 35.0%
AAATCACCTGATAGTCTGAA+GGG + chr3.2:69928170-69928189 None:intergenic 35.0%
AACCAAAAAGCCCATCATTA+AGG + chr3.2:69930229-69930248 None:intergenic 35.0%
ACAACTCCAAAGATATGCTT+GGG + chr3.2:69929522-69929541 None:intergenic 35.0%
ACCAAAAAGCCCATCATTAA+GGG + chr3.2:69930228-69930247 None:intergenic 35.0%
ACCATATAATAGAGCTTCCA+AGG + chr3.2:69926888-69926907 None:intergenic 35.0%
AGAGTATAGCCCTTAATGAT+GGG - chr3.2:69930216-69930235 MS.gene25860:CDS 35.0%
ATCAGCATCAGTATCACAAA+AGG + chr3.2:69926715-69926734 None:intergenic 35.0%
ATTATACGGACCCTAAAATC+TGG + chr3.2:69928447-69928466 None:intergenic 35.0%
CAGTGACTTCATAGATGATT+GGG - chr3.2:69928650-69928669 MS.gene25860:intron 35.0%
CATTGAAACTGAGAATGCAT+CGG + chr3.2:69928958-69928977 None:intergenic 35.0%
CCATATAATAGAGCTTCCAA+GGG + chr3.2:69926887-69926906 None:intergenic 35.0%
GAAACTTCACTTTCCAACAT+AGG - chr3.2:69925551-69925570 MS.gene25860:CDS 35.0%
GAGAACAAAGATTAGAAGAC+GGG + chr3.2:69927742-69927761 None:intergenic 35.0%
GCATCAAGAAAACCAAGATT+AGG + chr3.2:69929490-69929509 None:intergenic 35.0%
GCTAATGTTCCCTTTAATAG+TGG - chr3.2:69926745-69926764 MS.gene25860:intron 35.0%
GCTGCACAAATAAATGTATC+AGG + chr3.2:69929376-69929395 None:intergenic 35.0%
GTCCGAAAATTACTACACTT+AGG + chr3.2:69928334-69928353 None:intergenic 35.0%
GTGAAAAAATGCTATCCTCA+TGG - chr3.2:69926130-69926149 MS.gene25860:intron 35.0%
GTGTATGAGTTAATTTCCCT+TGG - chr3.2:69926868-69926887 MS.gene25860:intron 35.0%
GTTGAAGAGAGATTCTCTTA+AGG + chr3.2:69927092-69927111 None:intergenic 35.0%
TAAAGGGAACATTAGCATCA+AGG + chr3.2:69926741-69926760 None:intergenic 35.0%
TACAAATCTGTCACAAGTGA+TGG + chr3.2:69927406-69927425 None:intergenic 35.0%
TACGTTGAAGGAAAATCTCA+TGG - chr3.2:69927014-69927033 MS.gene25860:CDS 35.0%
TAGAGTATAGCCCTTAATGA+TGG - chr3.2:69930215-69930234 MS.gene25860:CDS 35.0%
TGATAGCAATTATTACCCTG+AGG - chr3.2:69926513-69926532 MS.gene25860:CDS 35.0%
TGATCGATGTTAACAAACTG+TGG - chr3.2:69926206-69926225 MS.gene25860:CDS 35.0%
TGGTTTATCTTCCAAAGTCA+AGG - chr3.2:69928680-69928699 MS.gene25860:intron 35.0%
TGTAGCCAACAACCTATTTA+AGG + chr3.2:69928518-69928537 None:intergenic 35.0%
TGTAGTTAACCTGAAACACA+AGG + chr3.2:69929076-69929095 None:intergenic 35.0%
TGTCTGAATTCGTGAGTATA+AGG - chr3.2:69929772-69929791 MS.gene25860:CDS 35.0%
TGTGCTTCTAACTAATTGGT+TGG - chr3.2:69927990-69928009 MS.gene25860:intron 35.0%
TTACTCGGTTGTAGCATTAA+TGG - chr3.2:69926829-69926848 MS.gene25860:CDS 35.0%
TTCTATGGGCTTGATAAATG+TGG - chr3.2:69926154-69926173 MS.gene25860:CDS 35.0%
! AATGGTCCATTATCAGGTTT+TGG + chr3.2:69928847-69928866 None:intergenic 35.0%
! ATCTGGAACAATCTGACAAA+AGG + chr3.2:69928430-69928449 None:intergenic 35.0%
! GTCAGATTGTTCCAGATTTT+AGG - chr3.2:69928433-69928452 MS.gene25860:intron 35.0%
! GTCCGTATAATACCTGTTTT+AGG - chr3.2:69928456-69928475 MS.gene25860:intron 35.0%
! TAAATAGGTTGTTGGCTACA+TGG - chr3.2:69928518-69928537 MS.gene25860:intron 35.0%
! TTAGAGCTGGGTAACATTTT+AGG - chr3.2:69925523-69925542 MS.gene25860:intron 35.0%
! TTTTTGCTTCCTTGTGTTTC+AGG - chr3.2:69929064-69929083 MS.gene25860:intron 35.0%
!! AGGCTTGTTTGATTGTGTTT+TGG + chr3.2:69928314-69928333 None:intergenic 35.0%
!! ATTGTGATGATGGTAAGACA+TGG - chr3.2:69929207-69929226 MS.gene25860:intron 35.0%
!! CAAGTGATAGCTTTAAAGCA+TGG + chr3.2:69927248-69927267 None:intergenic 35.0%
!! CAATTGCAGTCTATTGACTT+CGG - chr3.2:69929838-69929857 MS.gene25860:intron 35.0%
!! GATCAACAAAAAGTACCTCA+GGG + chr3.2:69926531-69926550 None:intergenic 35.0%
!! GTATATGGCTTTGTCTAACA+TGG - chr3.2:69929596-69929615 MS.gene25860:intron 35.0%
!! GTTTCAGGTTAACTACATCT+TGG - chr3.2:69929079-69929098 MS.gene25860:intron 35.0%
!! TATTACAAAGCTTTAGACGG+TGG - chr3.2:69928045-69928064 MS.gene25860:intron 35.0%
!! TGATCAACAAAAAGTACCTC+AGG + chr3.2:69926532-69926551 None:intergenic 35.0%
!!! AATCCTGAACCATTTTTTCG+AGG + chr3.2:69925893-69925912 None:intergenic 35.0%
!!! GTCGCTTTTCTCTTTTAAGT+TGG - chr3.2:69929618-69929637 MS.gene25860:intron 35.0%
AAAGCATGGCAACAAACAAC+AGG + chr3.2:69927234-69927253 None:intergenic 40.0%
ACAAGTATCTTGGATGGCAA+TGG - chr3.2:69926343-69926362 MS.gene25860:intron 40.0%
ACGCACTTCTATGATGAACT+TGG + chr3.2:69929160-69929179 None:intergenic 40.0%
AGCTCATAGCTATATGTTGG+AGG - chr3.2:69929714-69929733 MS.gene25860:CDS 40.0%
AGTTGGAGTGAGAAGATATC+AGG + chr3.2:69927654-69927673 None:intergenic 40.0%
ATACTGCCCAAGCATATCTT+TGG - chr3.2:69929513-69929532 MS.gene25860:CDS 40.0%
ATTGCCATCCAAGATACTTG+TGG + chr3.2:69926344-69926363 None:intergenic 40.0%
CACAACTCCAAAGATATGCT+TGG + chr3.2:69929523-69929542 None:intergenic 40.0%
CCCTTGGAAGCTCTATTATA+TGG - chr3.2:69926884-69926903 MS.gene25860:intron 40.0%
CGGTACTACAATTGTGATGA+TGG - chr3.2:69929197-69929216 MS.gene25860:intron 40.0%
CTTCTATGATGAACTTGGAC+TGG + chr3.2:69929155-69929174 None:intergenic 40.0%
CTTGATAAGCCTTTCTTGTG+TGG + chr3.2:69926239-69926258 None:intergenic 40.0%
GAATCCACATTCTCATCTGT+TGG + chr3.2:69927814-69927833 None:intergenic 40.0%
GATCCTTCCTTAACTCTTCT+CGG + chr3.2:69925486-69925505 None:intergenic 40.0%
GATGAATTTGCAGAATGAGG+TGG - chr3.2:69926768-69926787 MS.gene25860:intron 40.0%
GCAGTGACTTCATAGATGAT+TGG - chr3.2:69928649-69928668 MS.gene25860:intron 40.0%
GCTATCCTCATGGATTCTAT+GGG - chr3.2:69926140-69926159 MS.gene25860:CDS 40.0%
GGCAAATAACCACACAAGAA+AGG - chr3.2:69926227-69926246 MS.gene25860:CDS 40.0%
GTTGGAGTGAGAAGATATCA+GGG + chr3.2:69927653-69927672 None:intergenic 40.0%
TAGCTCATGAGCAGATGATT+TGG - chr3.2:69926552-69926571 MS.gene25860:CDS 40.0%
TCCATGAAGATTTACCTTGC+AGG + chr3.2:69926481-69926500 None:intergenic 40.0%
TGCTATCCTCATGGATTCTA+TGG - chr3.2:69926139-69926158 MS.gene25860:CDS 40.0%
TGGAGTAATGGTCCATTATC+AGG + chr3.2:69928853-69928872 None:intergenic 40.0%
TGGGATGAATTTGCAGAATG+AGG - chr3.2:69926765-69926784 MS.gene25860:intron 40.0%
TGTAGTACCGTTTATCCCAA+GGG + chr3.2:69929187-69929206 None:intergenic 40.0%
TGTCTTTATGCAAACCTACC+AGG + chr3.2:69927622-69927641 None:intergenic 40.0%
TTGAAGTGATATTGATCCGG+TGG + chr3.2:69930136-69930155 None:intergenic 40.0%
TTGCCTCGAAAAAATGGTTC+AGG - chr3.2:69925887-69925906 MS.gene25860:intron 40.0%
TTGGGATGTTAACAGATGGT+TGG - chr3.2:69925975-69925994 MS.gene25860:CDS 40.0%
TTGTAGTACCGTTTATCCCA+AGG + chr3.2:69929188-69929207 None:intergenic 40.0%
! AATATGACAGGTTAGTGGGT+TGG - chr3.2:69925608-69925627 MS.gene25860:CDS 40.0%
! CATCAGCATTTTCAGTAGAC+AGG + chr3.2:69927840-69927859 None:intergenic 40.0%
! TCAAATCTGCTAGTCTGCAA+AGG + chr3.2:69930068-69930087 None:intergenic 40.0%
!!! GCTTTTGGGATGTTAACAGA+TGG - chr3.2:69925971-69925990 MS.gene25860:CDS 40.0%
!!! TCGTGATTTTTCAAGCTCTC+AGG - chr3.2:69928980-69928999 MS.gene25860:intron 40.0%
!!! TCTGATATTTTGGCAGTCCA+GGG - chr3.2:69927542-69927561 MS.gene25860:CDS 40.0%
!!! TTCTGATATTTTGGCAGTCC+AGG - chr3.2:69927541-69927560 MS.gene25860:CDS 40.0%
AACAGACTGTATACAGCGAC+AGG - chr3.2:69926001-69926020 MS.gene25860:CDS 45.0%
AAGATGCTGTTGCAGCATAC+TGG + chr3.2:69928873-69928892 None:intergenic 45.0%
ACAGACTGTATACAGCGACA+GGG - chr3.2:69926002-69926021 MS.gene25860:CDS 45.0%
ACCTGCTAGAAAGACACAGA+AGG - chr3.2:69925456-69925475 MS.gene25860:intron 45.0%
AGATTGCTCTTGACACAGCA+AGG - chr3.2:69927059-69927078 MS.gene25860:intron 45.0%
AGCATCCACCACAAGTATCT+TGG - chr3.2:69926333-69926352 MS.gene25860:intron 45.0%
AGTTCCAAAACCTGCATTGG+CGG + chr3.2:69929815-69929834 None:intergenic 45.0%
CAGAGTTCCAAAACCTGCAT+TGG + chr3.2:69929818-69929837 None:intergenic 45.0%
CTAAGGTTTCATAGCTGCGA+GGG - chr3.2:69929664-69929683 MS.gene25860:intron 45.0%
CTAATTTCTCAGAGCCTGCA+AGG - chr3.2:69926464-69926483 MS.gene25860:intron 45.0%
CTGTGTATATCGGGAGAAGT+GGG - chr3.2:69926182-69926201 MS.gene25860:CDS 45.0%
CTTCCATTTAAGGGTCCAAG+TGG - chr3.2:69928132-69928151 MS.gene25860:intron 45.0%
GAAGCTGGAAAAAAACCACC+TGG - chr3.2:69925634-69925653 MS.gene25860:intron 45.0%
GACACATTCTCTAGGTGCTA+CGG + chr3.2:69927600-69927619 None:intergenic 45.0%
GATGGCTAAACTACGTTCCT+AGG + chr3.2:69927388-69927407 None:intergenic 45.0%
GCCTGCAAGGTAAATCTTCA+TGG - chr3.2:69926477-69926496 MS.gene25860:intron 45.0%
GCGCATCATTTCCCTAATCT+TGG - chr3.2:69929475-69929494 MS.gene25860:CDS 45.0%
GGAAAACCCTTCAGACTATC+AGG - chr3.2:69928161-69928180 MS.gene25860:intron 45.0%
GGAAAATCTCATGGCTGACT+TGG - chr3.2:69927023-69927042 MS.gene25860:CDS 45.0%
GTTGCAGCATACTGGAGTAA+TGG + chr3.2:69928865-69928884 None:intergenic 45.0%
TCAAGCCCATAGAATCCATG+AGG + chr3.2:69926148-69926167 None:intergenic 45.0%
TCCACCACAAGTATCTTGGA+TGG - chr3.2:69926337-69926356 MS.gene25860:intron 45.0%
TCTCCACTTGGACCCTTAAA+TGG + chr3.2:69928138-69928157 None:intergenic 45.0%
TGACCGAGAAGAGTTAAGGA+AGG - chr3.2:69925480-69925499 MS.gene25860:intron 45.0%
TGGAAAAAAACCACCTGGTG+TGG - chr3.2:69925639-69925658 MS.gene25860:intron 45.0%
TGGCTGCTAATGAACATGCA+GGG + chr3.2:69926303-69926322 None:intergenic 45.0%
TGTGGCAGACCTGTGTATAT+CGG - chr3.2:69926172-69926191 MS.gene25860:CDS 45.0%
TTGGCTGCTAATGAACATGC+AGG + chr3.2:69926304-69926323 None:intergenic 45.0%
! AATGATGCGCTATTTCACGC+AGG + chr3.2:69929465-69929484 None:intergenic 45.0%
! ACACATTCTCTAGGTGCTAC+GGG + chr3.2:69927599-69927618 None:intergenic 45.0%
! ATGATGCGCTATTTCACGCA+GGG + chr3.2:69929464-69929483 None:intergenic 45.0%
! CATTTTATCACCGCCAATGC+AGG - chr3.2:69929802-69929821 MS.gene25860:intron 45.0%
! GCTGCAACAGCATCTTTTCT+CGG - chr3.2:69928877-69928896 MS.gene25860:intron 45.0%
! GGTGGATGCTATGTGTCTTT+TGG + chr3.2:69926323-69926342 None:intergenic 45.0%
! TCTAAGGTTTCATAGCTGCG+AGG - chr3.2:69929663-69929682 MS.gene25860:intron 45.0%
!! TCTATTGACTTCGGTGTCGT+TGG - chr3.2:69929847-69929866 MS.gene25860:intron 45.0%
!!! GCCCTTAATGATGGGCTTTT+TGG - chr3.2:69930224-69930243 MS.gene25860:CDS 45.0%
ACTCAAGAGATGCATCACCC+TGG + chr3.2:69927562-69927581 None:intergenic 50.0%
AGCACCTAGAGAATGTGTCC+TGG - chr3.2:69927601-69927620 MS.gene25860:intron 50.0%
AGGCTGACCGAGAAGAGTTA+AGG - chr3.2:69925476-69925495 MS.gene25860:intron 50.0%
ATGAGTTTAGCAGCCACACC+AGG + chr3.2:69925655-69925674 None:intergenic 50.0%
ATGTCCAGCTTCACCAGTTG+AGG + chr3.2:69929412-69929431 None:intergenic 50.0%
CAAGTGTCTAACTGCTCCAC+CGG - chr3.2:69930117-69930136 MS.gene25860:intron 50.0%
CCACTTCTCCCGATATACAC+AGG + chr3.2:69926184-69926203 None:intergenic 50.0%
CCTACCAGGACACATTCTCT+AGG + chr3.2:69927608-69927627 None:intergenic 50.0%
CCTAGAGAATGTGTCCTGGT+AGG - chr3.2:69927605-69927624 MS.gene25860:intron 50.0%
CCTGTGTATATCGGGAGAAG+TGG - chr3.2:69926181-69926200 MS.gene25860:CDS 50.0%
CGTCGATCCCTTGGGATAAA+CGG - chr3.2:69929177-69929196 MS.gene25860:intron 50.0%
GAATGTGTGGATGCAGCAGA+TGG - chr3.2:69927784-69927803 MS.gene25860:CDS 50.0%
GAGTATACGCTGCAAAGTCC+TGG - chr3.2:69925923-69925942 MS.gene25860:intron 50.0%
GCCATCCAAGATACTTGTGG+TGG + chr3.2:69926341-69926360 None:intergenic 50.0%
GGGCATCACTTCTGCATCAA+TGG - chr3.2:69929684-69929703 MS.gene25860:CDS 50.0%
GTGGCAGACCTGTGTATATC+GGG - chr3.2:69926173-69926192 MS.gene25860:CDS 50.0%
TAAGGGTCCAAGTGGAGAAG+AGG - chr3.2:69928140-69928159 MS.gene25860:intron 50.0%
TGCAACTTCATGCCCTCAAC+TGG - chr3.2:69929396-69929415 MS.gene25860:CDS 50.0%
TGTCCAGCTTCACCAGTTGA+GGG + chr3.2:69929411-69929430 None:intergenic 50.0%
! ATAGAAGTGCGTCGATCCCT+TGG - chr3.2:69929168-69929187 MS.gene25860:intron 50.0%
! ATCACCGCCAATGCAGGTTT+TGG - chr3.2:69929808-69929827 MS.gene25860:intron 50.0%
! GCCTTCTGTGTCTTTCTAGC+AGG + chr3.2:69925460-69925479 None:intergenic 50.0%
! GGGTTTTCCTCTTCTCCACT+TGG + chr3.2:69928150-69928169 None:intergenic 50.0%
! TAGAAGTGCGTCGATCCCTT+GGG - chr3.2:69929169-69929188 MS.gene25860:intron 50.0%
!! TTAGTGGGTTGGACAGAAGC+TGG - chr3.2:69925619-69925638 MS.gene25860:intron 50.0%
ACGCTGCAAAGTCCTGGTGA+GGG - chr3.2:69925929-69925948 MS.gene25860:intron 55.0%
ACTGTATACAGCGACAGGGC+AGG - chr3.2:69926006-69926025 MS.gene25860:CDS 55.0%
AGATGTTTGCGACCCTCACC+AGG + chr3.2:69925944-69925963 None:intergenic 55.0%
AGTTTAGCAGCCACACCAGG+TGG + chr3.2:69925652-69925671 None:intergenic 55.0%
ATGCCCTCAACTGGTGAAGC+TGG - chr3.2:69929405-69929424 MS.gene25860:CDS 55.0%
TACGCTGCAAAGTCCTGGTG+AGG - chr3.2:69925928-69925947 MS.gene25860:intron 55.0%
! GCTTTAGACGGTGGAGATCG+TGG - chr3.2:69928054-69928073 MS.gene25860:intron 55.0%
! GGTGGAGATCGTGGCATTGA+TGG - chr3.2:69928063-69928082 MS.gene25860:intron 55.0%
!! CATCGGTTTCGCAGTTGCAC+CGG + chr3.2:69928941-69928960 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 69925445 69930261 69925445 ID=MS.gene25860
chr3.2 mRNA 69925445 69930261 69925445 ID=MS.gene25860.t1;Parent=MS.gene25860
chr3.2 exon 69930162 69930261 69930162 ID=MS.gene25860.t1.exon1;Parent=MS.gene25860.t1
chr3.2 CDS 69930162 69930261 69930162 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69930012 69930083 69930012 ID=MS.gene25860.t1.exon2;Parent=MS.gene25860.t1
chr3.2 CDS 69930012 69930083 69930012 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69929679 69929797 69929679 ID=MS.gene25860.t1.exon3;Parent=MS.gene25860.t1
chr3.2 CDS 69929679 69929797 69929679 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69929337 69929603 69929337 ID=MS.gene25860.t1.exon4;Parent=MS.gene25860.t1
chr3.2 CDS 69929337 69929603 69929337 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69927775 69927922 69927775 ID=MS.gene25860.t1.exon5;Parent=MS.gene25860.t1
chr3.2 CDS 69927775 69927922 69927775 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69927524 69927594 69927524 ID=MS.gene25860.t1.exon6;Parent=MS.gene25860.t1
chr3.2 CDS 69927524 69927594 69927524 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69927135 69927181 69927135 ID=MS.gene25860.t1.exon7;Parent=MS.gene25860.t1
chr3.2 CDS 69927135 69927181 69927135 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69926960 69927053 69926960 ID=MS.gene25860.t1.exon8;Parent=MS.gene25860.t1
chr3.2 CDS 69926960 69927053 69926960 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69926808 69926876 69926808 ID=MS.gene25860.t1.exon9;Parent=MS.gene25860.t1
chr3.2 CDS 69926808 69926876 69926808 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69926488 69926620 69926488 ID=MS.gene25860.t1.exon10;Parent=MS.gene25860.t1
chr3.2 CDS 69926488 69926620 69926488 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69926134 69926311 69926134 ID=MS.gene25860.t1.exon11;Parent=MS.gene25860.t1
chr3.2 CDS 69926134 69926311 69926134 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69925971 69926028 69925971 ID=MS.gene25860.t1.exon12;Parent=MS.gene25860.t1
chr3.2 CDS 69925971 69926028 69925971 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69925794 69925882 69925794 ID=MS.gene25860.t1.exon13;Parent=MS.gene25860.t1
chr3.2 CDS 69925794 69925882 69925794 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69925540 69925632 69925540 ID=MS.gene25860.t1.exon14;Parent=MS.gene25860.t1
chr3.2 CDS 69925540 69925632 69925540 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
chr3.2 exon 69925445 69925451 69925445 ID=MS.gene25860.t1.exon15;Parent=MS.gene25860.t1
chr3.2 CDS 69925445 69925451 69925445 ID=cds.MS.gene25860.t1;Parent=MS.gene25860.t1
Gene Sequence

>MS.gene25860

ATGGAAATTACACCTGCTAGAAAGACACAGAAGGCTGACCGAGAAGAGTTAAGGAAGGATCGACTCAATGAACAATTTTTAGAGCTGGGTAACATTTTAGGTACGTGAAACTTCACTTTCCAACATAGGTATGCTTAATATTCACCCTATTTTGCTTAATATGAATATGACAGGTTAGTGGGTTGGACAGAAGCTGGAAAAAAACCACCTGGTGTGGCTGCTAAACTCATAGATTGTAAATCATATAAAGGTGCATACTTTTACTCTTAAATGTCATTGAAAGTTACTGCATTATTTTGCAGTACATGTTATAAGGTTGCAACTATAAGGGAAAGAAAATATGTTATAGGTTATATATAGTTCTAATGTATGCTTAATGAGACAGAGAGAGACTTCTCAAAACTGAATTTATGGGTTGAATTTTGATGTTCTAATTATTAATTTGCCTCGAAAAAATGGTTCAGGATTTTATTTCATTGAGTATACGCTGCAAAGTCCTGGTGAGGGTCGCAAACATCTATATTCAGCTTTTGGGATGTTAACAGATGGTTGGTATAACAGACTGTATACAGCGACAGGGCAGGTACTATTCGATATCATTCATTTGTGAGTTTTAATTTGTTTTTTCGATGTCATTCATTTTTTGGTACATAATCAGGAGTTCAAATTTCCAGAATACACAGAAGTGAAAAAATGCTATCCTCATGGATTCTATGGGCTTGATAAATGTGGCAGACCTGTGTATATCGGGAGAAGTGGGATGATCGATGTTAACAAACTGTGGCAAATAACCACACAAGAAAGGCTTATCAAGCATCATGTGTCAGAACAAGAGAAAACACTAAGAGTAAGATACCCTGCATGTTCATTAGCAGCCAAAAGACACATAGCATCCACCACAAGTATCTTGGATGGCAATGGAGTAGTAAGCAAATTTTTCATATATTGTTTCATAATTTACTATTTGGTCTAATAATGCTGATTTTGTTATGTGATTGTATTATTCTTCTAGGGAATGTCTAATTTCTCAGAGCCTGCAAGGTAAATCTTCATGGAAATTCAGAAGATTGATAGCAATTATTACCCTGAGGTACTTTTTGTTGATCATAGCTCATGAGCAGATGATTTGGATATATATGTCTGCTATTAATGTGTGATTAAGTTAGACAGATTCTTAAATTTTTATTGTAGCAGATGATTTGGATGTACATGTCTTCTATGAATTGAAAGTGTAGCATTTGATAATGAATCATCTCTTTTTATGTTTCCTTTTGTGATACTGATGCTGATTTTCCTTGATGCTAATGTTCCCTTTAATAGTGGGATGAATTTGCAGAATGAGGTGGATTTATTGAGTAAAATTCAGCATCCAAATATAATTTCTTTACTCGGTTGTAGCATTAATGGAGACATGAGATTTATTGTGTATGAGTTAATTTCCCTTGGAAGCTCTATTATATGGTAATGTTTTGTATTTGATGCTGATTTATACATACATAGTAGAAGACATTTACAACTCTCAGTTAAATAACATTCTAAACTCGGTTACATTTTTCTTGTGCAAAATTTTACGTTGAAGGAAAATCTCATGGCTGACTTGGCATATGAGAATGAAGATTGCTCTTGACACAGCAAGGTGAACTTCCTTAAGAGAATCTCTCTTCAACATCTCAAATCTCTCTCTCACTTTTGTACTTTAATGCAATGTAGTTAAGGCTATTTTAATCACAACTTTAACCAAGTATACAAAATTCAAAATTACATGTGACATACCAAAAACTATGTTCCTGTTGTTTGTTGCCATGCTTTAAAGCTATCACTTGATTTCAAAGCTAGGAAGTGAACTTGATTTCATTCAAGTGTTGAATTGTTGTAACAATTTCTTTTGACAGATTGGTGTATCTTTTTTATCAATGCTTTATTAAGTTTCAATCATAGATCCTAGGAACGTAGTTTAGCCATCACTTGTGACAGATTTGTAACTTTTGCTTGCTCTTTTTGCAACTTGCTTTACAATATAGTGTGGATAGCACTTATAGTCTTCATGTGAGTTACCAATATTCAAAGATATTTTTACTTGCTATGTGTATTGCAAGTTCTGATATTTTGGCAGTCCAGGGTGATGCATCTCTTGAGTGATAAATGACAGCACCCGTAGCACCTAGAGAATGTGTCCTGGTAGGTTTGCATAAAGACAAAGAAGAACCCTGATATCTTCTCACTCCAACTTGCAATGAATAATTCCATCACCATTTGTGTTAATTCATTTTTCTTTTTATTTTGTGAATTGGATTCCCGTCTTCTAATCTTTGTTCTCTTCAATGGAATACAAACTATAGGAATGTGTGGATGCAGCAGATGGAAAACCAACAGATGAGAATGTGGATTCTTACCTGTCTACTGAAAATGCTGATGCTGATCTTAGAACTTTGCCTTTCAGCAATCTAAAACGAATTTCAGGAACAGAGAGTAGAAATCAGAATAAAGGTAAAATATTCATGGATGTATGCTATTGCTTAGAGTTCTATGTATGCAATCTATACATTGTGCTTCTAACTAATTGGTTGGAATTTCATATTGATTTTTAGAGTTGGTTGGCTTATTACAAAGCTTTAGACGGTGGAGATCGTGGCATTGATGGTGATTTCCCTGTTGTGCTTTCTTTAGAAAAACCTAAAGTTAAACTGCTTCCATTTAAGGGTCCAAGTGGAGAAGAGGAAAACCCTTCAGACTATCAGGTGATTTTGTTAGTTTTTATTAATCATTTTTTTATTGTACCACTATCTATTTTGTGACTGTTCGATAGTATAAAACTTATTTTAGACCACATTTTTTCAAAACTATTTTATTGAACAGTTTTTAAAAACCAAAACACAATCAAACAAGCCTAAGTGTAGTAATTTTCGGACATTTTTGTCAAGCCATTGCGCATTTGTTATAATAACATTTAGTCGCATTGGTTACATATTCTGACTTCGATGTCCTTTTGTCAGATTGTTCCAGATTTTAGGGTCCGTATAATACCTGTTTTAGGGTTCGTATAATAATCCAACCCTTTTTTTATAATCAACCTTAAATAGGTTGTTGGCTACATGGCATCATCTATATGTGTGTTGCAGTACATTATGTATGCAATGACAATAGTTATTATGTTATTAAAAATTGTTAATATTTACAGTTTTTATGGTTTAATTGAATAATTATGCAGTGACTTCATAGATGATTGGGTGAAAATTGGTTTATCTTCCAAAGTCAAGGTTCTAAAAGAACATGAATGCAATGATTTCAAGCTAAAGATTACAGTATGAATGCAATGATGCAGCTAAAGATTGTTAATTTTTTTTTGAATAAAAAAATAAATGATTAATGTTAAACATAATTGTAGGTGGATTGGTTATTCCAAAACCTGATAATGGACCATTACTCCAGTATGCTGCAACAGCATCTTTTCTCGGTAAATTGTATAGTGATTACATTGATCATCTCAAAATATCCGGTGCAACTGCGAAACCGATGCATTCTCAGTTTCAATGCTTCGTGATTTTTCAAGCTCTCAGGTGAATTACTAACCTTCTAACCATTTTCGATAGTAACATATAGGAATTGGAAATAGTCTAAATTTTTGCTTCCTTGTGTTTCAGGTTAACTACATCTTGGGACAAAATCCAATGAAAATGAGTTATTTAGTGGGATATGATGATAAGTTTCCAGTCCAAGTTCATCATAGAAGTGCGTCGATCCCTTGGGATAAACGGTACTACAATTGTGATGATGGTAAGACATGGCTGAGCTCGAAAAATGCCTCAAATACATCAACCTAATGTAGAAGTTAGTCTTGAGTTATTATTTTGTTGATAATTGTCTCATATAATTTGTACTTGATTGCCCTCTTCTACATGAACTTGATATTGGTTCTTGCAACAAACTTCCTGATACATTTATTTGTGCAGCTGCAACTTCATGCCCTCAACTGGTGAAGCTGGACATGCATAACTGTTCTTGTGTTAGCGATGAAACCCTGCGTGAAATAGCGCATCATTTCCCTAATCTTGGTTTTCTTGATGCATCATACTGCCCAAGCATATCTTTGGAGTTGTGCTTCAAATTGTACACTCGCTTTTTGCATATGTAAGCTTGTATTTTGAACTAAAGTATATGGCTTTGTCTAACATGGTCGCTTTTCTCTTTTAAGTTGGTTCGAATGACAATGTTGACAATTCTAAGGTTTCATAGCTGCGAGGGCATCACTTCTGCATCAATGGCTGCAATAGCTCATAGCTATATGTTGGAGGTATTTTATCTGTCCCAGATATTGATATTAATGACATGTCTGAATTCGTGAGTATAAGGATTAATACATTTTATCACCGCCAATGCAGGTTTTGGAACTCTGCAATTGCAGTCTATTGACTTCGGTGTCGTTGGATCTTCCACGTATGAAGAATATTAGATTGGCGTACTGTCGCAAGTATGTTTCTGCTTCATTTTTTCTCTCCCAAGAAAAGAACTATAATTCTATTATTGATGTGTCTCTCGCTATTGCTTTTCACTTTCTGTAAGTCAATACCAAATCTTTTTTTCTATTGTTGCATCTAATTTTATTTTATTTTTGAATTGTTTCCTTTGCAGACTAGCAGATTTGAACTTGAGTGCTATATCACTTTCTTCTATACAAGTGTCTAACTGCTCCACCGGATCAATATCACTTCAAATTCACTTCAAGTATGTCTTATAATTATGTCTTCATTCATTCCTCATTCTCTTATATTCTAGAGTATAGCCCTTAATGATGGGCTTTTTGGTTATGCAGAAATTAG

Protein sequence

>MS.gene25860.t1

MEITPARKTQKADREELRKDRLNEQFLELGNILVGWTEAGKKPPGVAAKLIDCKSYKGFYFIEYTLQSPGEGRKHLYSAFGMLTDGWYNRLYTATGQEFKFPEYTEVKKCYPHGFYGLDKCGRPVYIGRSGMIDVNKLWQITTQERLIKHHVSEQEKTLRVRYPACSLAAKRHIASTTSILDGNGVECVDAADGKPTDENVDSYLSTENADADLRTLPFSNLKRISGTESRNQNKEKPKVKLLPFKGPSGEEENPSDYQVVGYMASSICVLQYIIDFIDDWVKIGLSSKVKVLKEHECNDFKLKITVDWLFQNLIMDHYSSMLQQHLFSVNYILGQNPMKMSYLVGYDDKFPVQVHHRSASIPWDKRYYNCDDAATSCPQLVKLDMHNCSCVSDETLREIAHHFPNLGFLDASYCPSISLELCFKLYTRFLHICEGITSASMAAIAHSYMLEVLELCNCSLLTSVSLDLPRMKNIRLAYCRKLADLNLSAISLSSIQVSNCSTGSISLQIHFKN