Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25928.t1 | XP_013461033.1 | 96.4 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 4.90E-228 | 800.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25928.t1 | Q9FJP6 | 52.7 | 556 | 230 | 9 | 1 | 525 | 1 | 554 | 2.7e-102 | 374.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25928.t1 | A0A072UZS8 | 96.4 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 3.5e-228 | 800.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene25928 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene25928 | 0.816822 | 4.54E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene25928 | 0.847373 | 1.21E-59 | -1.69E-46 |
| MS.gene049368 | MS.gene25928 | 0.818259 | 2.15E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene25928 | 0.809561 | 1.78E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene25928 | 0.866003 | 3.92E-65 | -1.69E-46 |
| MS.gene050414 | MS.gene25928 | 0.842247 | 2.91E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene25928 | 0.839061 | 1.98E-57 | -1.69E-46 |
| MS.gene050654 | MS.gene25928 | 0.839476 | 1.55E-57 | -1.69E-46 |
| MS.gene050941 | MS.gene25928 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene25928 | 0.808431 | 3.11E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene25928 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene25928 | 0.806188 | 9.29E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene25928 | 0.82538 | 4.84E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene25928 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene25928 | 0.804105 | 2.53E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene25928 | 0.811955 | 5.40E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene25928 | 0.845977 | 2.90E-59 | -1.69E-46 |
| MS.gene052463 | MS.gene25928 | 0.856956 | 2.26E-62 | -1.69E-46 |
| MS.gene052516 | MS.gene25928 | 0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene25928 | 0.844133 | 9.13E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene25928 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene052932 | MS.gene25928 | 0.822782 | 1.97E-53 | -1.69E-46 |
| MS.gene053058 | MS.gene25928 | 0.812144 | 4.92E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene25928 | 0.812727 | 3.66E-51 | -1.69E-46 |
| MS.gene053456 | MS.gene25928 | 0.838563 | 2.67E-57 | -1.69E-46 |
| MS.gene053726 | MS.gene25928 | 0.80161 | 8.30E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene25928 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene25928 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene25928 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene25928 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene25928 | 0.811072 | 8.40E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene25928 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene25928 | 0.868013 | 8.95E-66 | -1.69E-46 |
| MS.gene05552 | MS.gene25928 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene25928 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene25928 | 0.840467 | 8.55E-58 | -1.69E-46 |
| MS.gene056097 | MS.gene25928 | 0.802084 | 6.64E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene25928 | 0.8196 | 1.07E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene25928 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene25928 | 0.811421 | 7.06E-51 | -1.69E-46 |
| MS.gene056578 | MS.gene25928 | 0.801524 | 8.64E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene25928 | 0.847689 | 9.87E-60 | -1.69E-46 |
| MS.gene056776 | MS.gene25928 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene25928 | 0.80687 | 6.67E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene25928 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene25928 | 0.803929 | 2.76E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene25928 | 0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene25928 | 0.844685 | 6.49E-59 | -1.69E-46 |
| MS.gene057102 | MS.gene25928 | 0.84151 | 4.55E-58 | -1.69E-46 |
| MS.gene057155 | MS.gene25928 | 0.818593 | 1.81E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene25928 | 0.816315 | 5.89E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene25928 | 0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene25928 | 0.807479 | 4.95E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene25928 | 0.830684 | 2.56E-55 | -1.69E-46 |
| MS.gene058897 | MS.gene25928 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene25928 | 0.808232 | 3.43E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene25928 | 0.803038 | 4.22E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene25928 | -0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene25928 | 0.856934 | 2.30E-62 | -1.69E-46 |
| MS.gene060527 | MS.gene25928 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene25928 | 0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene25928 | 0.858109 | 1.03E-62 | -1.69E-46 |
| MS.gene060933 | MS.gene25928 | 0.823915 | 1.07E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene25928 | 0.834709 | 2.56E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene25928 | 0.8484 | 6.28E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene25928 | 0.837939 | 3.87E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25928.t1 | MTR_3g078340 | 96.408 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 0.0 | 1045 |
| MS.gene25928.t1 | MTR_6g008170 | 51.120 | 491 | 212 | 8 | 6 | 479 | 30 | 509 | 6.51e-145 | 428 |
| MS.gene25928.t1 | MTR_4g063800 | 35.179 | 307 | 182 | 6 | 181 | 482 | 332 | 626 | 3.95e-40 | 154 |
| MS.gene25928.t1 | MTR_4g063800 | 23.747 | 379 | 248 | 9 | 25 | 384 | 256 | 612 | 4.70e-15 | 78.6 |
| MS.gene25928.t1 | MTR_1g094215 | 36.972 | 284 | 173 | 3 | 209 | 490 | 163 | 442 | 2.54e-38 | 146 |
| MS.gene25928.t1 | MTR_4g485520 | 32.491 | 277 | 182 | 2 | 209 | 483 | 206 | 479 | 5.27e-37 | 143 |
| MS.gene25928.t1 | MTR_1g094215 | 36.972 | 284 | 173 | 3 | 209 | 490 | 346 | 625 | 6.52e-37 | 145 |
| MS.gene25928.t1 | MTR_4g485520 | 32.491 | 277 | 182 | 2 | 209 | 483 | 374 | 647 | 3.65e-36 | 142 |
| MS.gene25928.t1 | MTR_3g466220 | 31.579 | 285 | 191 | 2 | 210 | 493 | 534 | 815 | 1.47e-32 | 132 |
| MS.gene25928.t1 | MTR_3g466220 | 34.884 | 86 | 56 | 0 | 7 | 92 | 195 | 280 | 4.15e-11 | 66.2 |
| MS.gene25928.t1 | MTR_3g466220 | 31.579 | 285 | 191 | 2 | 210 | 493 | 555 | 836 | 1.84e-32 | 132 |
| MS.gene25928.t1 | MTR_3g466220 | 34.884 | 86 | 56 | 0 | 7 | 92 | 216 | 301 | 4.20e-11 | 66.2 |
| MS.gene25928.t1 | MTR_7g059405 | 29.412 | 272 | 189 | 1 | 209 | 480 | 362 | 630 | 1.92e-29 | 122 |
| MS.gene25928.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 326 | 596 | 3.52e-29 | 122 |
| MS.gene25928.t1 | MTR_7g097020 | 30.108 | 279 | 191 | 2 | 211 | 488 | 485 | 760 | 4.45e-29 | 122 |
| MS.gene25928.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 443 | 713 | 7.59e-29 | 121 |
| MS.gene25928.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 447 | 717 | 7.86e-29 | 121 |
| MS.gene25928.t1 | MTR_1g018180 | 28.727 | 275 | 191 | 2 | 211 | 483 | 64 | 335 | 2.57e-28 | 115 |
| MS.gene25928.t1 | MTR_3g103050 | 26.523 | 279 | 196 | 3 | 211 | 483 | 54 | 329 | 1.39e-24 | 105 |
| MS.gene25928.t1 | MTR_3g085610 | 25.352 | 497 | 311 | 15 | 24 | 506 | 280 | 730 | 1.52e-24 | 108 |
| MS.gene25928.t1 | MTR_2g026130 | 32.472 | 271 | 178 | 2 | 215 | 483 | 182 | 449 | 5.34e-22 | 99.4 |
| MS.gene25928.t1 | MTR_7g078330 | 30.034 | 293 | 182 | 8 | 203 | 483 | 360 | 641 | 1.48e-21 | 99.0 |
| MS.gene25928.t1 | MTR_7g078330 | 25.263 | 380 | 221 | 8 | 25 | 395 | 275 | 600 | 1.03e-16 | 83.6 |
| MS.gene25928.t1 | MTR_7g053260 | 28.470 | 281 | 190 | 6 | 210 | 483 | 174 | 450 | 1.68e-21 | 97.8 |
| MS.gene25928.t1 | MTR_7g116600 | 30.317 | 221 | 150 | 3 | 264 | 482 | 232 | 450 | 4.21e-20 | 93.6 |
| MS.gene25928.t1 | MTR_5g083030 | 27.698 | 278 | 191 | 6 | 209 | 479 | 406 | 680 | 2.43e-16 | 82.8 |
| MS.gene25928.t1 | MTR_2g018010 | 29.762 | 252 | 168 | 6 | 230 | 475 | 418 | 666 | 2.16e-15 | 79.7 |
| MS.gene25928.t1 | MTR_3g106140 | 26.948 | 308 | 206 | 6 | 193 | 483 | 89 | 394 | 3.98e-15 | 78.2 |
| MS.gene25928.t1 | MTR_3g078160 | 28.139 | 231 | 156 | 6 | 265 | 487 | 433 | 661 | 5.79e-14 | 75.1 |
| MS.gene25928.t1 | MTR_3g078160 | 28.139 | 231 | 156 | 6 | 265 | 487 | 433 | 661 | 5.93e-14 | 75.1 |
| MS.gene25928.t1 | MTR_1g079450 | 29.730 | 222 | 146 | 5 | 267 | 482 | 219 | 436 | 1.33e-13 | 73.2 |
| MS.gene25928.t1 | MTR_8g080280 | 26.619 | 278 | 184 | 7 | 216 | 483 | 442 | 709 | 3.83e-13 | 72.8 |
| MS.gene25928.t1 | MTR_4g107010 | 25.347 | 288 | 195 | 8 | 215 | 487 | 386 | 668 | 1.43e-11 | 67.4 |
| MS.gene25928.t1 | MTR_7g007780 | 30.573 | 157 | 106 | 1 | 250 | 403 | 601 | 757 | 7.52e-11 | 65.5 |
| MS.gene25928.t1 | MTR_1g014420 | 25.641 | 273 | 190 | 5 | 222 | 483 | 143 | 413 | 9.25e-11 | 64.7 |
| MS.gene25928.t1 | MTR_5g034440 | 25.439 | 228 | 163 | 4 | 265 | 485 | 440 | 667 | 9.58e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25928.t1 | AT5G65200 | 58.423 | 558 | 198 | 11 | 1 | 526 | 1 | 556 | 0.0 | 585 |
| MS.gene25928.t1 | AT5G62560 | 49.556 | 563 | 243 | 9 | 1 | 526 | 1 | 559 | 1.47e-172 | 499 |
| MS.gene25928.t1 | AT5G40140 | 50.746 | 536 | 234 | 11 | 5 | 526 | 31 | 550 | 9.28e-163 | 473 |
| MS.gene25928.t1 | AT3G47820 | 50.187 | 536 | 217 | 11 | 1 | 508 | 1 | 514 | 2.78e-158 | 461 |
| MS.gene25928.t1 | AT5G67340 | 27.143 | 490 | 313 | 8 | 25 | 493 | 241 | 707 | 1.99e-45 | 170 |
| MS.gene25928.t1 | AT5G67340 | 27.143 | 490 | 313 | 8 | 25 | 493 | 241 | 707 | 1.99e-45 | 170 |
| MS.gene25928.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 357 | 633 | 1.97e-37 | 146 |
| MS.gene25928.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 357 | 633 | 1.97e-37 | 146 |
| MS.gene25928.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 546 | 822 | 9.24e-37 | 145 |
| MS.gene25928.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 546 | 822 | 9.24e-37 | 145 |
| MS.gene25928.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 549 | 825 | 1.00e-36 | 145 |
| MS.gene25928.t1 | AT3G46510 | 29.808 | 312 | 208 | 3 | 182 | 491 | 334 | 636 | 2.55e-32 | 131 |
| MS.gene25928.t1 | AT3G46510 | 23.958 | 384 | 261 | 9 | 16 | 384 | 246 | 613 | 6.74e-15 | 78.2 |
| MS.gene25928.t1 | AT2G28830 | 32.867 | 286 | 179 | 5 | 209 | 487 | 286 | 565 | 1.36e-31 | 129 |
| MS.gene25928.t1 | AT2G28830 | 25.823 | 395 | 261 | 10 | 8 | 384 | 166 | 546 | 2.33e-21 | 98.2 |
| MS.gene25928.t1 | AT3G54850 | 34.066 | 273 | 175 | 2 | 210 | 480 | 349 | 618 | 1.31e-30 | 126 |
| MS.gene25928.t1 | AT1G23030 | 30.325 | 277 | 187 | 2 | 210 | 483 | 335 | 608 | 8.03e-30 | 124 |
| MS.gene25928.t1 | AT1G71020 | 32.734 | 278 | 180 | 3 | 210 | 483 | 197 | 471 | 1.58e-29 | 122 |
| MS.gene25928.t1 | AT1G71020 | 32.734 | 278 | 180 | 3 | 210 | 483 | 345 | 619 | 4.38e-29 | 122 |
| MS.gene25928.t1 | AT3G01400 | 27.881 | 269 | 189 | 2 | 217 | 483 | 74 | 339 | 1.14e-26 | 111 |
| MS.gene25928.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 441 | 722 | 1.29e-24 | 108 |
| MS.gene25928.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 477 | 758 | 1.33e-24 | 108 |
| MS.gene25928.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 477 | 758 | 1.33e-24 | 108 |
| MS.gene25928.t1 | AT4G16490 | 32.601 | 273 | 177 | 4 | 215 | 483 | 192 | 461 | 8.63e-23 | 101 |
| MS.gene25928.t1 | AT5G42340 | 29.603 | 277 | 190 | 2 | 206 | 480 | 379 | 652 | 3.74e-22 | 100 |
| MS.gene25928.t1 | AT5G42340 | 37.805 | 82 | 48 | 1 | 25 | 103 | 291 | 372 | 7.38e-12 | 68.6 |
| MS.gene25928.t1 | AT5G58680 | 27.778 | 270 | 189 | 3 | 217 | 483 | 72 | 338 | 8.25e-22 | 97.4 |
| MS.gene25928.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
| MS.gene25928.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
| MS.gene25928.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
| MS.gene25928.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 173 | 451 | 9.95e-18 | 86.3 |
| MS.gene25928.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
| MS.gene25928.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
| MS.gene25928.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
| MS.gene25928.t1 | AT1G60190 | 26.715 | 277 | 189 | 8 | 222 | 485 | 390 | 665 | 2.23e-13 | 73.2 |
| MS.gene25928.t1 | AT2G25130 | 27.407 | 270 | 183 | 6 | 230 | 488 | 133 | 400 | 9.21e-13 | 70.9 |
| MS.gene25928.t1 | AT1G29340 | 22.812 | 320 | 206 | 4 | 25 | 342 | 306 | 586 | 3.91e-12 | 69.3 |
| MS.gene25928.t1 | AT5G18320 | 26.689 | 296 | 200 | 7 | 209 | 490 | 162 | 454 | 5.10e-12 | 68.6 |
| MS.gene25928.t1 | AT2G44900 | 31.210 | 157 | 105 | 1 | 250 | 403 | 612 | 768 | 1.64e-11 | 67.8 |
| MS.gene25928.t1 | AT2G44900 | 31.210 | 157 | 105 | 1 | 250 | 403 | 612 | 768 | 1.64e-11 | 67.8 |
Find 164 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGGAGTTTGAGATTTAA+AGG | 0.191233 | 3.2:-69212853 | MS.gene25928:CDS |
| TTGGAGAAGATGAGGGGTTT+TGG | 0.230463 | 3.2:-69212742 | MS.gene25928:CDS |
| GGTTCCGACGTTGCTTTCTA+TGG | 0.286020 | 3.2:-69213061 | MS.gene25928:CDS |
| TCAGAGTAATAGAGTTAAAA+TGG | 0.294116 | 3.2:-69213097 | MS.gene25928:CDS |
| GGGCGAGGGAGAAGGCTAAA+AGG | 0.303243 | 3.2:-69212768 | MS.gene25928:CDS |
| GGGAATGATTGTTGAGAAAT+CGG | 0.320952 | 3.2:+69213962 | None:intergenic |
| TTCACGGTATGTTGTTGTTC+AGG | 0.327991 | 3.2:-69213403 | MS.gene25928:CDS |
| GACATTAACGACCCGGTAAT+GGG | 0.329670 | 3.2:+69214086 | None:intergenic |
| GAGTTTCTATGTCCCATTAC+CGG | 0.348979 | 3.2:-69214098 | MS.gene25928:CDS |
| CGGAGAAAGAGGATCTGATT+AGG | 0.350035 | 3.2:-69213827 | MS.gene25928:CDS |
| GCTTCTTCTTCTTCCGAAAC+AGG | 0.356143 | 3.2:+69213570 | None:intergenic |
| AAACCCTAACGTTCCTGTTT+CGG | 0.359819 | 3.2:-69213583 | MS.gene25928:CDS |
| TCACACGCCGTGACGGAGTT+AGG | 0.366039 | 3.2:-69213750 | MS.gene25928:CDS |
| TTTGGATGATGATAATAAAA+TGG | 0.372139 | 3.2:-69213226 | MS.gene25928:CDS |
| CGACCCGGTCGTAGTCTCTT+CGG | 0.377913 | 3.2:-69214063 | MS.gene25928:CDS |
| TGCGTTGTTTAGTTTGGCTT+TGG | 0.379190 | 3.2:-69213244 | MS.gene25928:CDS |
| GTGATAATCGCGGCGAGTCC+TGG | 0.383507 | 3.2:-69213681 | MS.gene25928:CDS |
| TGCGGTTGGGTGTACGGTGC+GGG | 0.384867 | 3.2:+69213896 | None:intergenic |
| GTGAAAGGTAAAGGCGTTCC+AGG | 0.396856 | 3.2:+69213663 | None:intergenic |
| TGCGGGTGCGTTGTTTAGTT+TGG | 0.400711 | 3.2:-69213250 | MS.gene25928:CDS |
| TCTTCCGAAACAGGAACGTT+AGG | 0.402333 | 3.2:+69213579 | None:intergenic |
| GGACATTAACGACCCGGTAA+TGG | 0.405561 | 3.2:+69214085 | None:intergenic |
| AAAATGGCGATTGGTGTTCT+TGG | 0.408213 | 3.2:-69213210 | MS.gene25928:CDS |
| CGAACGAGGTACCGGGTTGC+CGG | 0.409468 | 3.2:-69212658 | MS.gene25928:CDS |
| ATGGGACATAGAAACTCTTT+AGG | 0.414926 | 3.2:+69214104 | None:intergenic |
| TGCCAATGCGGTGGATTGTT+TGG | 0.416139 | 3.2:-69212953 | MS.gene25928:CDS |
| TTGTTTGGTGAGTTTGTTGA+GGG | 0.422104 | 3.2:-69212938 | MS.gene25928:CDS |
| TCAAAACAACCATCGTAAAC+TGG | 0.424319 | 3.2:-69213929 | MS.gene25928:CDS |
| CGTTGTATGCTTTGAGTCAT+GGG | 0.424637 | 3.2:-69212870 | MS.gene25928:CDS |
| TCTGATTAGGGTTTCTGAAA+AGG | 0.426736 | 3.2:-69213814 | MS.gene25928:CDS |
| GACCCGGTCGTAGTCTCTTC+GGG | 0.428173 | 3.2:-69214062 | MS.gene25928:CDS |
| GGAGAAAGAGGATCTGATTA+GGG | 0.428639 | 3.2:-69213826 | MS.gene25928:CDS |
| GCGTTGTATGCTTTGAGTCA+TGG | 0.439647 | 3.2:-69212871 | MS.gene25928:CDS |
| TTCGTTCGTTGATTGATTCA+CGG | 0.441082 | 3.2:-69213419 | MS.gene25928:CDS |
| TTCTCCACGGTGGTGTAATC+CGG | 0.442445 | 3.2:+69213873 | None:intergenic |
| GTGGTGTAATCCGGTGCGGT+TGG | 0.442844 | 3.2:+69213882 | None:intergenic |
| ATGGGAGTTTGAGATTTAAA+GGG | 0.444229 | 3.2:-69212852 | MS.gene25928:CDS |
| AGACGGGGACGGATAGGGCG+AGG | 0.446380 | 3.2:-69212783 | MS.gene25928:CDS |
| GGTCAACGCTGTTGCTTCGT+TGG | 0.449675 | 3.2:-69213382 | MS.gene25928:CDS |
| AGAGTTAAAATGGTGAAACT+TGG | 0.451853 | 3.2:-69213087 | MS.gene25928:CDS |
| GAAGAAGCTGAAGAGTAAAG+AGG | 0.455129 | 3.2:-69213541 | MS.gene25928:CDS |
| CTCTTTAGGAGGTTGTTGCT+TGG | 0.456080 | 3.2:+69214118 | None:intergenic |
| AGGAAGATCCCGAGTTGAAA+TGG | 0.456371 | 3.2:+69213715 | None:intergenic |
| GATTGTTGAGAAATCGGGTT+GGG | 0.461298 | 3.2:+69213968 | None:intergenic |
| TGGTGTAATCCGGTGCGGTT+GGG | 0.462579 | 3.2:+69213883 | None:intergenic |
| ATCCGGTGCGGTTGGGTGTA+CGG | 0.463198 | 3.2:+69213890 | None:intergenic |
| TTGCTTTCTATGGTGATGAC+GGG | 0.465507 | 3.2:-69213051 | MS.gene25928:CDS |
| TTCTGATTGATGTGTTGAAA+GGG | 0.466378 | 3.2:-69213299 | MS.gene25928:CDS |
| GAGTTAAAATGGTGAAACTT+GGG | 0.469133 | 3.2:-69213086 | MS.gene25928:CDS |
| CTTCCGAAACAGGAACGTTA+GGG | 0.472631 | 3.2:+69213580 | None:intergenic |
| ACAATTCTCCCTTGTCGCCT+CGG | 0.472722 | 3.2:+69212900 | None:intergenic |
| TTTCTGATTGATGTGTTGAA+AGG | 0.476777 | 3.2:-69213300 | MS.gene25928:CDS |
| GACTGGAATGAAGCTTAAAT+CGG | 0.480179 | 3.2:+69214004 | None:intergenic |
| TTCAACACATCAATCAGAAA+AGG | 0.484827 | 3.2:+69213303 | None:intergenic |
| AAGGTTATTGTTCCTACCTC+CGG | 0.487841 | 3.2:+69212639 | None:intergenic |
| CGAGGAACAGAGAAGAAGCT+AGG | 0.488822 | 3.2:-69213476 | MS.gene25928:CDS |
| GACGGATAGGGCGAGGGAGA+AGG | 0.492270 | 3.2:-69212776 | MS.gene25928:CDS |
| GGAGGGAAGGACTGCAATGC+TGG | 0.492464 | 3.2:-69212977 | MS.gene25928:CDS |
| TTTGAGGGTGATTGAAGAGA+CGG | 0.493350 | 3.2:-69212800 | MS.gene25928:CDS |
| AACAAGGTTTAGTTTCGCTT+AGG | 0.495114 | 3.2:-69213506 | MS.gene25928:CDS |
| TGAAGAGACGGGGACGGATA+GGG | 0.498915 | 3.2:-69212788 | MS.gene25928:CDS |
| GGAATGATTGTTGAGAAATC+GGG | 0.502632 | 3.2:+69213963 | None:intergenic |
| TTGAAGAGACGGGGACGGAT+AGG | 0.503676 | 3.2:-69212789 | MS.gene25928:CDS |
| TTGAGGGTGATTGAAGAGAC+GGG | 0.507056 | 3.2:-69212799 | MS.gene25928:CDS |
| GGCGAGGGAGAAGGCTAAAA+GGG | 0.508160 | 3.2:-69212767 | MS.gene25928:CDS |
| GACGGGGACAATGGCGAGTA+GGG | 0.508942 | 3.2:-69213034 | MS.gene25928:CDS |
| GGATGACTCGAACGAGGTAC+CGG | 0.510341 | 3.2:-69212666 | MS.gene25928:CDS |
| AAGGGTGTTGGAGAAGATGA+GGG | 0.514938 | 3.2:-69212749 | MS.gene25928:CDS |
| GTTTGGTGAGTTTGTTGAGG+GGG | 0.518188 | 3.2:-69212936 | MS.gene25928:CDS |
| AGTTTCTATGTCCCATTACC+GGG | 0.519361 | 3.2:-69214097 | MS.gene25928:CDS |
| AAGACAGTTATGGGTGGCAA+TGG | 0.521822 | 3.2:-69214185 | None:intergenic |
| TTCTTTAACAATATTCTCCA+CGG | 0.528327 | 3.2:+69213860 | None:intergenic |
| TTCATTCCAGTCCTGCAAAA+CGG | 0.532095 | 3.2:-69213993 | MS.gene25928:CDS |
| AAGATGAGAATTGTGCGGTC+AGG | 0.532876 | 3.2:-69213333 | MS.gene25928:CDS |
| CACCGTACACCCAACCGCAC+CGG | 0.537054 | 3.2:-69213892 | MS.gene25928:CDS |
| GGAGAAGGCTAAAAGGGTGT+TGG | 0.538380 | 3.2:-69212761 | MS.gene25928:CDS |
| CGCGGTGGCGGAGAATCCTC+CGG | 0.539515 | 3.2:-69213781 | MS.gene25928:CDS |
| CACGTTGGACGAAGAGTGAA+AGG | 0.540583 | 3.2:+69213648 | None:intergenic |
| CTGATTGATGTGTTGAAAGG+GGG | 0.541695 | 3.2:-69213297 | MS.gene25928:CDS |
| GACGGGGACGGATAGGGCGA+GGG | 0.543757 | 3.2:-69212782 | MS.gene25928:CDS |
| AAAGGGTGTTGGAGAAGATG+AGG | 0.543783 | 3.2:-69212750 | MS.gene25928:CDS |
| GTTGCTTTCTATGGTGATGA+CGG | 0.544048 | 3.2:-69213052 | MS.gene25928:CDS |
| GGAACTGTTAAACGCGGTGG+CGG | 0.544513 | 3.2:-69213793 | MS.gene25928:CDS |
| GACCTCAGCGCATGCATCAA+CGG | 0.547695 | 3.2:+69213177 | None:intergenic |
| TGTTCGATTTCTCTAACGAA+AGG | 0.548324 | 3.2:+69213355 | None:intergenic |
| ATTGTTTGGTGAGTTTGTTG+AGG | 0.549398 | 3.2:-69212939 | MS.gene25928:CDS |
| AGCTGGACTCCGAGGCGACA+AGG | 0.549976 | 3.2:-69212909 | MS.gene25928:CDS |
| GTGCGGTTGGGTGTACGGTG+CGG | 0.551703 | 3.2:+69213895 | None:intergenic |
| GGACGAAGAGTGAAAGGTAA+AGG | 0.563032 | 3.2:+69213654 | None:intergenic |
| GAATCGCAGGAACATGCTGC+GGG | 0.563961 | 3.2:-69213267 | MS.gene25928:CDS |
| GAGGAACAGAGAAGAAGCTA+GGG | 0.566795 | 3.2:-69213475 | MS.gene25928:CDS |
| CACCAAACAATCCACCGCAT+TGG | 0.566797 | 3.2:+69212951 | None:intergenic |
| TTGAGAAGAAGAACGATGGA+AGG | 0.567515 | 3.2:+69214142 | None:intergenic |
| GGAGATGGTGATGATGAAGA+TGG | 0.568899 | 3.2:-69212721 | MS.gene25928:CDS |
| TGTTCCTACCTCCGGCAACC+CGG | 0.569545 | 3.2:+69212647 | None:intergenic |
| GAGATTTAAAGGGTTGGCGA+AGG | 0.570009 | 3.2:-69212842 | MS.gene25928:CDS |
| GATGATAATAAAATGGCGAT+TGG | 0.571044 | 3.2:-69213219 | MS.gene25928:CDS |
| TGACGGGGACAATGGCGAGT+AGG | 0.584009 | 3.2:-69213035 | MS.gene25928:CDS |
| TATGGTGATGACGGGGACAA+TGG | 0.584130 | 3.2:-69213043 | MS.gene25928:CDS |
| GTGTAATCTGGCAATGTGTG+TGG | 0.584777 | 3.2:-69212998 | MS.gene25928:CDS |
| GCTGGACTCCGAGGCGACAA+GGG | 0.586777 | 3.2:-69212908 | MS.gene25928:CDS |
| TGACCCGAAGAGACTACGAC+CGG | 0.587227 | 3.2:+69214059 | None:intergenic |
| CGTGGCAACCATTTCAACTC+GGG | 0.591248 | 3.2:-69213723 | MS.gene25928:CDS |
| GTTGATGCATGCGCTGAGGT+CGG | 0.592183 | 3.2:-69213175 | MS.gene25928:CDS |
| GGGGAATGAGCTGGACTCCG+AGG | 0.596170 | 3.2:-69212917 | MS.gene25928:CDS |
| GGTGATTGAAGAGACGGGGA+CGG | 0.596797 | 3.2:-69212794 | MS.gene25928:CDS |
| TCAAACGATGAAGATGAAGA+AGG | 0.597145 | 3.2:+69213618 | None:intergenic |
| TGCCTTGTATCATTTAACGT+TGG | 0.601308 | 3.2:-69213121 | MS.gene25928:CDS |
| TGTTTGGTGAGTTTGTTGAG+GGG | 0.602374 | 3.2:-69212937 | MS.gene25928:CDS |
| GGACATAGAAACTCTTTAGG+AGG | 0.604367 | 3.2:+69214107 | None:intergenic |
| TGGCAATGTGTGTGGAGGGA+AGG | 0.608019 | 3.2:-69212990 | MS.gene25928:CDS |
| AACCAACGTTAAATGATACA+AGG | 0.612453 | 3.2:+69213119 | None:intergenic |
| TGAATCGCAGGAACATGCTG+CGG | 0.615669 | 3.2:-69213268 | MS.gene25928:CDS |
| TTGAACGGAGAGACGTTCGA+AGG | 0.617323 | 3.2:+69214034 | None:intergenic |
| GAGTTTGAGATTTAAAGGGT+TGG | 0.617611 | 3.2:-69212848 | MS.gene25928:CDS |
| CGGGTCGTTAATGTCCGACC+CGG | 0.619576 | 3.2:-69214078 | MS.gene25928:CDS |
| TGATTGTTGAGAAATCGGGT+TGG | 0.620301 | 3.2:+69213967 | None:intergenic |
| ACGAGGTACCGGGTTGCCGG+AGG | 0.620764 | 3.2:-69212655 | MS.gene25928:CDS |
| CGGGTCGGACATTAACGACC+CGG | 0.622801 | 3.2:+69214079 | None:intergenic |
| AGGGTGTTGGAGAAGATGAG+GGG | 0.627637 | 3.2:-69212748 | MS.gene25928:CDS |
| TGCAATGCTGGATGCCAATG+CGG | 0.628398 | 3.2:-69212965 | MS.gene25928:CDS |
| GATGACTCGAACGAGGTACC+GGG | 0.628698 | 3.2:-69212665 | MS.gene25928:CDS |
| ACGTGGCAACCATTTCAACT+CGG | 0.628980 | 3.2:-69213724 | MS.gene25928:CDS |
| ACGGCGTGTGAGAATATCAC+CGG | 0.631743 | 3.2:+69213762 | None:intergenic |
| TAAATCGGTGCAGACTTGAA+CGG | 0.632167 | 3.2:+69214019 | None:intergenic |
| GAAGGAAGCGAAAGCTGTGG+AGG | 0.632563 | 3.2:-69212824 | MS.gene25928:CDS |
| AGTTAAAATGGTGAAACTTG+GGG | 0.636139 | 3.2:-69213085 | MS.gene25928:CDS |
| GATTATCACAGATTCTTCTG+AGG | 0.643262 | 3.2:+69213695 | None:intergenic |
| AAAATGTAGTTGAGTTGACA+AGG | 0.644928 | 3.2:+69212620 | None:intergenic |
| TGGATTGAGAAGAAGAACGA+TGG | 0.644935 | 3.2:+69214138 | None:intergenic |
| TTTGTCGCACCAGTTTACGA+TGG | 0.646791 | 3.2:+69213920 | None:intergenic |
| TCTGATTGATGTGTTGAAAG+GGG | 0.648345 | 3.2:-69213298 | MS.gene25928:CDS |
| TGCTTTCTATGGTGATGACG+GGG | 0.650983 | 3.2:-69213050 | MS.gene25928:CDS |
| GGTCGGAGTCTGAGCGAACG+AGG | 0.651403 | 3.2:-69213158 | MS.gene25928:CDS |
| CGAAGAGACTACGACCGGGT+CGG | 0.655580 | 3.2:+69214064 | None:intergenic |
| GGCGACAAGGGAGAATTGTG+TGG | 0.661007 | 3.2:-69212896 | MS.gene25928:CDS |
| GGCGAAGGAAGCGAAAGCTG+TGG | 0.661522 | 3.2:-69212827 | MS.gene25928:CDS |
| GATATTCTCACACGCCGTGA+CGG | 0.662372 | 3.2:-69213757 | MS.gene25928:CDS |
| ACGTGTACCTAACTCCGTCA+CGG | 0.662780 | 3.2:+69213743 | None:intergenic |
| CACGGTGGTGTAATCCGGTG+CGG | 0.665606 | 3.2:+69213878 | None:intergenic |
| TAATCTGGCAATGTGTGTGG+AGG | 0.671131 | 3.2:-69212995 | MS.gene25928:CDS |
| TGAGGGTGATTGAAGAGACG+GGG | 0.673338 | 3.2:-69212798 | MS.gene25928:CDS |
| TAAAATGGTGAAACTTGGGG+TGG | 0.676446 | 3.2:-69213082 | MS.gene25928:CDS |
| GACAAGGGAGAATTGTGTGG+CGG | 0.677958 | 3.2:-69212893 | MS.gene25928:CDS |
| GGGTTTCGCTATGCTCGCCG+CGG | 0.683987 | 3.2:-69213455 | MS.gene25928:CDS |
| GGTACCGGGTTGCCGGAGGT+AGG | 0.684000 | 3.2:-69212651 | MS.gene25928:CDS |
| AAAGGAACTGTTAAACGCGG+TGG | 0.687435 | 3.2:-69213796 | MS.gene25928:CDS |
| AGCCGTTGATGCATGCGCTG+AGG | 0.692858 | 3.2:-69213179 | MS.gene25928:CDS |
| AATCTGGCAATGTGTGTGGA+GGG | 0.696481 | 3.2:-69212994 | MS.gene25928:CDS |
| AGAAGAATCTGTGATAATCG+CGG | 0.698509 | 3.2:-69213691 | MS.gene25928:CDS |
| TGAAAAGGAACTGTTAAACG+CGG | 0.699521 | 3.2:-69213799 | MS.gene25928:CDS |
| GTGGCAATGGAAAACACAGG+TGG | 0.702456 | 3.2:-69214172 | MS.gene25928:CDS |
| CGAACAAGATGAGAATTGTG+CGG | 0.709970 | 3.2:-69213338 | MS.gene25928:CDS |
| CGAATCGCCGATAAAATCCG+CGG | 0.710104 | 3.2:+69213438 | None:intergenic |
| GCGTGTGAGAATATCACCGG+AGG | 0.710272 | 3.2:+69213765 | None:intergenic |
| GACCCGAAGAGACTACGACC+GGG | 0.714896 | 3.2:+69214060 | None:intergenic |
| AATGCTGGATGCCAATGCGG+TGG | 0.718832 | 3.2:-69212962 | MS.gene25928:CDS |
| TTTAACAATATTCTCCACGG+TGG | 0.720548 | 3.2:+69213863 | None:intergenic |
| CGGGTGGGATGACTCGAACG+AGG | 0.722144 | 3.2:-69212672 | MS.gene25928:CDS |
| ATCACCATAGAAAGCAACGT+CGG | 0.731770 | 3.2:+69213057 | None:intergenic |
| GTGACGGAGTTAGGTACACG+TGG | 0.734676 | 3.2:-69213741 | MS.gene25928:CDS |
| TGGGTGGCAATGGAAAACAC+AGG | 0.747948 | 3.2:-69214175 | MS.gene25928:CDS |
| TTTCGCTTAGGAGTATCACG+AGG | 0.748715 | 3.2:-69213494 | MS.gene25928:CDS |
| CGCACCGGATTACACCACCG+TGG | 0.793146 | 3.2:-69213877 | MS.gene25928:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGTTAAAGAAAAAATGA+CGG | - | chr3.2:69212944-69212963 | MS.gene25928:CDS | 15.0% |
| !! | TTTGGATGATGATAATAAAA+TGG | - | chr3.2:69213568-69213587 | MS.gene25928:CDS | 20.0% |
| ! | TCAGAGTAATAGAGTTAAAA+TGG | - | chr3.2:69213697-69213716 | MS.gene25928:CDS | 25.0% |
| ! | TTCAAAAAGACTATCAAACT+CGG | + | chr3.2:69214101-69214120 | None:intergenic | 25.0% |
| ! | TTCTTTAACAATATTCTCCA+CGG | + | chr3.2:69212937-69212956 | None:intergenic | 25.0% |
| !!! | GTTTGATAGTCTTTTTGAAT+CGG | - | chr3.2:69214102-69214121 | MS.gene25928:CDS | 25.0% |
| !!! | TTTGATAGTCTTTTTGAATC+GGG | - | chr3.2:69214103-69214122 | MS.gene25928:CDS | 25.0% |
| AACCAACGTTAAATGATACA+AGG | + | chr3.2:69213678-69213697 | None:intergenic | 30.0% | |
| AGAGTTAAAATGGTGAAACT+TGG | - | chr3.2:69213707-69213726 | MS.gene25928:CDS | 30.0% | |
| AGTTAAAATGGTGAAACTTG+GGG | - | chr3.2:69213709-69213728 | MS.gene25928:CDS | 30.0% | |
| GAGTTAAAATGGTGAAACTT+GGG | - | chr3.2:69213708-69213727 | MS.gene25928:CDS | 30.0% | |
| GATGATAATAAAATGGCGAT+TGG | - | chr3.2:69213575-69213594 | MS.gene25928:CDS | 30.0% | |
| TGTTAAAGAAAAAATGACGG+CGG | - | chr3.2:69212947-69212966 | MS.gene25928:CDS | 30.0% | |
| TTCAACACATCAATCAGAAA+AGG | + | chr3.2:69213494-69213513 | None:intergenic | 30.0% | |
| TTCTGATTGATGTGTTGAAA+GGG | - | chr3.2:69213495-69213514 | MS.gene25928:CDS | 30.0% | |
| TTTCTGATTGATGTGTTGAA+AGG | - | chr3.2:69213494-69213513 | MS.gene25928:CDS | 30.0% | |
| ! | ATGGGAGTTTGAGATTTAAA+GGG | - | chr3.2:69213942-69213961 | MS.gene25928:CDS | 30.0% |
| !! | AAAATGTAGTTGAGTTGACA+AGG | + | chr3.2:69214177-69214196 | None:intergenic | 30.0% |
| !!! | GTTGTTGATTTTGTGTAATC+TGG | - | chr3.2:69213784-69213803 | MS.gene25928:CDS | 30.0% |
| !!! | GTTGTTTTGATAGCTAAGTT+GGG | + | chr3.2:69212855-69212874 | None:intergenic | 30.0% |
| AGAAGAATCTGTGATAATCG+CGG | - | chr3.2:69213103-69213122 | MS.gene25928:CDS | 35.0% | |
| ATGGGACATAGAAACTCTTT+AGG | + | chr3.2:69212693-69212712 | None:intergenic | 35.0% | |
| GACTGGAATGAAGCTTAAAT+CGG | + | chr3.2:69212793-69212812 | None:intergenic | 35.0% | |
| GATTATCACAGATTCTTCTG+AGG | + | chr3.2:69213102-69213121 | None:intergenic | 35.0% | |
| GGAATGATTGTTGAGAAATC+GGG | + | chr3.2:69212834-69212853 | None:intergenic | 35.0% | |
| GGGAATGATTGTTGAGAAAT+CGG | + | chr3.2:69212835-69212854 | None:intergenic | 35.0% | |
| TCAAAACAACCATCGTAAAC+TGG | - | chr3.2:69212865-69212884 | MS.gene25928:CDS | 35.0% | |
| TCAAACGATGAAGATGAAGA+AGG | + | chr3.2:69213179-69213198 | None:intergenic | 35.0% | |
| TCTGATTGATGTGTTGAAAG+GGG | - | chr3.2:69213496-69213515 | MS.gene25928:CDS | 35.0% | |
| TGAAAAGGAACTGTTAAACG+CGG | - | chr3.2:69212995-69213014 | MS.gene25928:CDS | 35.0% | |
| TGCCTTGTATCATTTAACGT+TGG | - | chr3.2:69213673-69213692 | MS.gene25928:CDS | 35.0% | |
| TGTTCGATTTCTCTAACGAA+AGG | + | chr3.2:69213442-69213461 | None:intergenic | 35.0% | |
| TTTAACAATATTCTCCACGG+TGG | + | chr3.2:69212934-69212953 | None:intergenic | 35.0% | |
| ! | AACAAGGTTTAGTTTCGCTT+AGG | - | chr3.2:69213288-69213307 | MS.gene25928:CDS | 35.0% |
| ! | ATAGTCTTTTTGAATCGGGT+GGG | - | chr3.2:69214107-69214126 | MS.gene25928:CDS | 35.0% |
| ! | CATGGGAGTTTGAGATTTAA+AGG | - | chr3.2:69213941-69213960 | MS.gene25928:CDS | 35.0% |
| ! | GAGTTTGAGATTTAAAGGGT+TGG | - | chr3.2:69213946-69213965 | MS.gene25928:CDS | 35.0% |
| ! | TCTGATTAGGGTTTCTGAAA+AGG | - | chr3.2:69212980-69212999 | MS.gene25928:CDS | 35.0% |
| ! | TTCGTTCGTTGATTGATTCA+CGG | - | chr3.2:69213375-69213394 | MS.gene25928:CDS | 35.0% |
| !! | ATTGTTTGGTGAGTTTGTTG+AGG | - | chr3.2:69213855-69213874 | MS.gene25928:CDS | 35.0% |
| !! | TTGTTTGGTGAGTTTGTTGA+GGG | - | chr3.2:69213856-69213875 | MS.gene25928:CDS | 35.0% |
| !!! | GGTTGTTTTGATAGCTAAGT+TGG | + | chr3.2:69212856-69212875 | None:intergenic | 35.0% |
| AAACCCTAACGTTCCTGTTT+CGG | - | chr3.2:69213211-69213230 | MS.gene25928:CDS | 40.0% | |
| AAGGTTATTGTTCCTACCTC+CGG | + | chr3.2:69214158-69214177 | None:intergenic | 40.0% | |
| AGTTTCTATGTCCCATTACC+GGG | - | chr3.2:69212697-69212716 | MS.gene25928:CDS | 40.0% | |
| ATCACCATAGAAAGCAACGT+CGG | + | chr3.2:69213740-69213759 | None:intergenic | 40.0% | |
| CGAACAAGATGAGAATTGTG+CGG | - | chr3.2:69213456-69213475 | MS.gene25928:CDS | 40.0% | |
| CTGATTGATGTGTTGAAAGG+GGG | - | chr3.2:69213497-69213516 | MS.gene25928:CDS | 40.0% | |
| GAAGAAGCTGAAGAGTAAAG+AGG | - | chr3.2:69213253-69213272 | MS.gene25928:CDS | 40.0% | |
| GAAGAAGGTGAAAAACACGT+TGG | + | chr3.2:69213164-69213183 | None:intergenic | 40.0% | |
| GAGTTTCTATGTCCCATTAC+CGG | - | chr3.2:69212696-69212715 | MS.gene25928:CDS | 40.0% | |
| GATTGTTGAGAAATCGGGTT+GGG | + | chr3.2:69212829-69212848 | None:intergenic | 40.0% | |
| GGACATAGAAACTCTTTAGG+AGG | + | chr3.2:69212690-69212709 | None:intergenic | 40.0% | |
| GGAGAAAGAGGATCTGATTA+GGG | - | chr3.2:69212968-69212987 | MS.gene25928:CDS | 40.0% | |
| TAAAATGGTGAAACTTGGGG+TGG | - | chr3.2:69213712-69213731 | MS.gene25928:CDS | 40.0% | |
| TAAATCGGTGCAGACTTGAA+CGG | + | chr3.2:69212778-69212797 | None:intergenic | 40.0% | |
| TGATTGTTGAGAAATCGGGT+TGG | + | chr3.2:69212830-69212849 | None:intergenic | 40.0% | |
| TGGATTGAGAAGAAGAACGA+TGG | + | chr3.2:69212659-69212678 | None:intergenic | 40.0% | |
| TTCATTCCAGTCCTGCAAAA+CGG | - | chr3.2:69212801-69212820 | MS.gene25928:CDS | 40.0% | |
| TTGAGAAGAAGAACGATGGA+AGG | + | chr3.2:69212655-69212674 | None:intergenic | 40.0% | |
| TTTGAGGGTGATTGAAGAGA+CGG | - | chr3.2:69213994-69214013 | MS.gene25928:CDS | 40.0% | |
| ! | AAAATGGCGATTGGTGTTCT+TGG | - | chr3.2:69213584-69213603 | MS.gene25928:CDS | 40.0% |
| ! | CGTTGTATGCTTTGAGTCAT+GGG | - | chr3.2:69213924-69213943 | MS.gene25928:CDS | 40.0% |
| ! | GATAGTCTTTTTGAATCGGG+TGG | - | chr3.2:69214106-69214125 | MS.gene25928:CDS | 40.0% |
| ! | GTTGCTTTCTATGGTGATGA+CGG | - | chr3.2:69213742-69213761 | MS.gene25928:CDS | 40.0% |
| ! | TTCACGGTATGTTGTTGTTC+AGG | - | chr3.2:69213391-69213410 | MS.gene25928:CDS | 40.0% |
| ! | TTGCTTTCTATGGTGATGAC+GGG | - | chr3.2:69213743-69213762 | MS.gene25928:CDS | 40.0% |
| !! | GAGGTTTTTGAGCAAGAACA+AGG | - | chr3.2:69213272-69213291 | MS.gene25928:CDS | 40.0% |
| !! | TGCGTTGTTTAGTTTGGCTT+TGG | - | chr3.2:69213550-69213569 | MS.gene25928:CDS | 40.0% |
| !! | TGTTTGGTGAGTTTGTTGAG+GGG | - | chr3.2:69213857-69213876 | MS.gene25928:CDS | 40.0% |
| AAAAATGACGGCGGAGAAAG+AGG | - | chr3.2:69212956-69212975 | MS.gene25928:CDS | 45.0% | |
| AAAGGAACTGTTAAACGCGG+TGG | - | chr3.2:69212998-69213017 | MS.gene25928:CDS | 45.0% | |
| AAGATGAGAATTGTGCGGTC+AGG | - | chr3.2:69213461-69213480 | MS.gene25928:CDS | 45.0% | |
| AATCTGGCAATGTGTGTGGA+GGG | - | chr3.2:69213800-69213819 | MS.gene25928:CDS | 45.0% | |
| ACGTGGCAACCATTTCAACT+CGG | - | chr3.2:69213070-69213089 | MS.gene25928:CDS | 45.0% | |
| CGGAGAAAGAGGATCTGATT+AGG | - | chr3.2:69212967-69212986 | MS.gene25928:CDS | 45.0% | |
| CTTCCGAAACAGGAACGTTA+GGG | + | chr3.2:69213217-69213236 | None:intergenic | 45.0% | |
| GACATTAACGACCCGGTAAT+GGG | + | chr3.2:69212711-69212730 | None:intergenic | 45.0% | |
| GAGGAACAGAGAAGAAGCTA+GGG | - | chr3.2:69213319-69213338 | MS.gene25928:CDS | 45.0% | |
| GCTTCTTCTTCTTCCGAAAC+AGG | + | chr3.2:69213227-69213246 | None:intergenic | 45.0% | |
| GGACGAAGAGTGAAAGGTAA+AGG | + | chr3.2:69213143-69213162 | None:intergenic | 45.0% | |
| GTGTAATCTGGCAATGTGTG+TGG | - | chr3.2:69213796-69213815 | MS.gene25928:CDS | 45.0% | |
| TAATCTGGCAATGTGTGTGG+AGG | - | chr3.2:69213799-69213818 | MS.gene25928:CDS | 45.0% | |
| TCTTCCGAAACAGGAACGTT+AGG | + | chr3.2:69213218-69213237 | None:intergenic | 45.0% | |
| TTGAGGGTGATTGAAGAGAC+GGG | - | chr3.2:69213995-69214014 | MS.gene25928:CDS | 45.0% | |
| TTTGTCGCACCAGTTTACGA+TGG | + | chr3.2:69212877-69212896 | None:intergenic | 45.0% | |
| ! | AGGAAGATCCCGAGTTGAAA+TGG | + | chr3.2:69213082-69213101 | None:intergenic | 45.0% |
| ! | CTCTTTAGGAGGTTGTTGCT+TGG | + | chr3.2:69212679-69212698 | None:intergenic | 45.0% |
| ! | GAGATTTAAAGGGTTGGCGA+AGG | - | chr3.2:69213952-69213971 | MS.gene25928:CDS | 45.0% |
| ! | GCGTTGTATGCTTTGAGTCA+TGG | - | chr3.2:69213923-69213942 | MS.gene25928:CDS | 45.0% |
| ! | GGAGATGGTGATGATGAAGA+TGG | - | chr3.2:69214073-69214092 | MS.gene25928:CDS | 45.0% |
| ! | TGCTTTCTATGGTGATGACG+GGG | - | chr3.2:69213744-69213763 | MS.gene25928:CDS | 45.0% |
| ! | TTGGAGAAGATGAGGGGTTT+TGG | - | chr3.2:69214052-69214071 | MS.gene25928:CDS | 45.0% |
| !! | AAAGGGTGTTGGAGAAGATG+AGG | - | chr3.2:69214044-69214063 | MS.gene25928:CDS | 45.0% |
| !! | AAGGGTGTTGGAGAAGATGA+GGG | - | chr3.2:69214045-69214064 | MS.gene25928:CDS | 45.0% |
| !! | GAAAGCTGTGGAGGTTTTGA+GGG | - | chr3.2:69213979-69213998 | MS.gene25928:CDS | 45.0% |
| !! | GTTTGGTGAGTTTGTTGAGG+GGG | - | chr3.2:69213858-69213877 | MS.gene25928:CDS | 45.0% |
| !! | TTTCGCTTAGGAGTATCACG+AGG | - | chr3.2:69213300-69213319 | MS.gene25928:CDS | 45.0% |
| !!! | AAGATGAGGGGTTTTGGAGA+TGG | - | chr3.2:69214058-69214077 | MS.gene25928:CDS | 45.0% |
| ACAATTCTCCCTTGTCGCCT+CGG | + | chr3.2:69213897-69213916 | None:intergenic | 50.0% | |
| ACGGCGTGTGAGAATATCAC+CGG | + | chr3.2:69213035-69213054 | None:intergenic | 50.0% | |
| ACGTGTACCTAACTCCGTCA+CGG | + | chr3.2:69213054-69213073 | None:intergenic | 50.0% | |
| CACCAAACAATCCACCGCAT+TGG | + | chr3.2:69213846-69213865 | None:intergenic | 50.0% | |
| CACGTTGGACGAAGAGTGAA+AGG | + | chr3.2:69213149-69213168 | None:intergenic | 50.0% | |
| CGAATCGCCGATAAAATCCG+CGG | + | chr3.2:69213359-69213378 | None:intergenic | 50.0% | |
| CGAGGAACAGAGAAGAAGCT+AGG | - | chr3.2:69213318-69213337 | MS.gene25928:CDS | 50.0% | |
| CGTGGCAACCATTTCAACTC+GGG | - | chr3.2:69213071-69213090 | MS.gene25928:CDS | 50.0% | |
| GACAAGGGAGAATTGTGTGG+CGG | - | chr3.2:69213901-69213920 | MS.gene25928:CDS | 50.0% | |
| GATATTCTCACACGCCGTGA+CGG | - | chr3.2:69213037-69213056 | MS.gene25928:CDS | 50.0% | |
| GGACATTAACGACCCGGTAA+TGG | + | chr3.2:69212712-69212731 | None:intergenic | 50.0% | |
| GTGGCAATGGAAAACACAGG+TGG | - | chr3.2:69212622-69212641 | MS.gene25928:CDS | 50.0% | |
| TGAATCGCAGGAACATGCTG+CGG | - | chr3.2:69213526-69213545 | MS.gene25928:CDS | 50.0% | |
| TGAGGGTGATTGAAGAGACG+GGG | - | chr3.2:69213996-69214015 | MS.gene25928:CDS | 50.0% | |
| TGCAATGCTGGATGCCAATG+CGG | - | chr3.2:69213829-69213848 | MS.gene25928:CDS | 50.0% | |
| TGCGGGTGCGTTGTTTAGTT+TGG | - | chr3.2:69213544-69213563 | MS.gene25928:CDS | 50.0% | |
| TGGGTGGCAATGGAAAACAC+AGG | - | chr3.2:69212619-69212638 | MS.gene25928:CDS | 50.0% | |
| TTCTCCACGGTGGTGTAATC+CGG | + | chr3.2:69212924-69212943 | None:intergenic | 50.0% | |
| TTGAACGGAGAGACGTTCGA+AGG | + | chr3.2:69212763-69212782 | None:intergenic | 50.0% | |
| TTTGTTGAGGGGGAATGAGC+TGG | - | chr3.2:69213868-69213887 | MS.gene25928:CDS | 50.0% | |
| ! | ATGCTCGCCGCGGATTTTAT+CGG | - | chr3.2:69213349-69213368 | MS.gene25928:CDS | 50.0% |
| ! | CGAAAGCTGTGGAGGTTTTG+AGG | - | chr3.2:69213978-69213997 | MS.gene25928:CDS | 50.0% |
| ! | GGAGAAGGCTAAAAGGGTGT+TGG | - | chr3.2:69214033-69214052 | MS.gene25928:CDS | 50.0% |
| ! | GGTTCCGACGTTGCTTTCTA+TGG | - | chr3.2:69213733-69213752 | MS.gene25928:CDS | 50.0% |
| !! | AGGGTGTTGGAGAAGATGAG+GGG | - | chr3.2:69214046-69214065 | MS.gene25928:CDS | 50.0% |
| !! | GTGAAAGGTAAAGGCGTTCC+AGG | + | chr3.2:69213134-69213153 | None:intergenic | 50.0% |
| !! | TATGGTGATGACGGGGACAA+TGG | - | chr3.2:69213751-69213770 | MS.gene25928:CDS | 50.0% |
| !! | TGCCAATGCGGTGGATTGTT+TGG | - | chr3.2:69213841-69213860 | MS.gene25928:CDS | 50.0% |
| AATGCTGGATGCCAATGCGG+TGG | - | chr3.2:69213832-69213851 | MS.gene25928:CDS | 55.0% | |
| AGGGGGATTCAGTGAATCGC+AGG | - | chr3.2:69213514-69213533 | MS.gene25928:CDS | 55.0% | |
| GAAGGAAGCGAAAGCTGTGG+AGG | - | chr3.2:69213970-69213989 | MS.gene25928:CDS | 55.0% | |
| GAATCGCAGGAACATGCTGC+GGG | - | chr3.2:69213527-69213546 | MS.gene25928:CDS | 55.0% | |
| GACCTCAGCGCATGCATCAA+CGG | + | chr3.2:69213620-69213639 | None:intergenic | 55.0% | |
| GCGTGTGAGAATATCACCGG+AGG | + | chr3.2:69213032-69213051 | None:intergenic | 55.0% | |
| GGAACTGTTAAACGCGGTGG+CGG | - | chr3.2:69213001-69213020 | MS.gene25928:CDS | 55.0% | |
| GGATGACTCGAACGAGGTAC+CGG | - | chr3.2:69214128-69214147 | MS.gene25928:CDS | 55.0% | |
| GGCGACAAGGGAGAATTGTG+TGG | - | chr3.2:69213898-69213917 | MS.gene25928:CDS | 55.0% | |
| GGCGAGGGAGAAGGCTAAAA+GGG | - | chr3.2:69214027-69214046 | MS.gene25928:CDS | 55.0% | |
| GGTGATTGAAGAGACGGGGA+CGG | - | chr3.2:69214000-69214019 | MS.gene25928:CDS | 55.0% | |
| GTTGATGCATGCGCTGAGGT+CGG | - | chr3.2:69213619-69213638 | MS.gene25928:CDS | 55.0% | |
| TGAAGAGACGGGGACGGATA+GGG | - | chr3.2:69214006-69214025 | MS.gene25928:CDS | 55.0% | |
| TGACCCGAAGAGACTACGAC+CGG | + | chr3.2:69212738-69212757 | None:intergenic | 55.0% | |
| TGGCAATGTGTGTGGAGGGA+AGG | - | chr3.2:69213804-69213823 | MS.gene25928:CDS | 55.0% | |
| TGGTGTAATCCGGTGCGGTT+GGG | + | chr3.2:69212914-69212933 | None:intergenic | 55.0% | |
| TTGAAGAGACGGGGACGGAT+AGG | - | chr3.2:69214005-69214024 | MS.gene25928:CDS | 55.0% | |
| ! | GATGACTCGAACGAGGTACC+GGG | - | chr3.2:69214129-69214148 | MS.gene25928:CDS | 55.0% |
| ! | GGTCAACGCTGTTGCTTCGT+TGG | - | chr3.2:69213412-69213431 | MS.gene25928:CDS | 55.0% |
| ! | GTGACGGAGTTAGGTACACG+TGG | - | chr3.2:69213053-69213072 | MS.gene25928:CDS | 55.0% |
| ! | TGGGTTCCGTTTTGCAGGAC+TGG | + | chr3.2:69212810-69212829 | None:intergenic | 55.0% |
| AGCCGTTGATGCATGCGCTG+AGG | - | chr3.2:69213615-69213634 | MS.gene25928:CDS | 60.0% | |
| ATCCGGTGCGGTTGGGTGTA+CGG | + | chr3.2:69212907-69212926 | None:intergenic | 60.0% | |
| CACGGTGGTGTAATCCGGTG+CGG | + | chr3.2:69212919-69212938 | None:intergenic | 60.0% | |
| CGAAGAGACTACGACCGGGT+CGG | + | chr3.2:69212733-69212752 | None:intergenic | 60.0% | |
| CGACCCGGTCGTAGTCTCTT+CGG | - | chr3.2:69212731-69212750 | MS.gene25928:CDS | 60.0% | |
| CGGGTCGGACATTAACGACC+CGG | + | chr3.2:69212718-69212737 | None:intergenic | 60.0% | |
| CGGGTCGTTAATGTCCGACC+CGG | - | chr3.2:69212716-69212735 | MS.gene25928:CDS | 60.0% | |
| GACCCGAAGAGACTACGACC+GGG | + | chr3.2:69212737-69212756 | None:intergenic | 60.0% | |
| GACCCGGTCGTAGTCTCTTC+GGG | - | chr3.2:69212732-69212751 | MS.gene25928:CDS | 60.0% | |
| GACGGGGACAATGGCGAGTA+GGG | - | chr3.2:69213760-69213779 | MS.gene25928:CDS | 60.0% | |
| GGAGGGAAGGACTGCAATGC+TGG | - | chr3.2:69213817-69213836 | MS.gene25928:CDS | 60.0% | |
| GGCGAAGGAAGCGAAAGCTG+TGG | - | chr3.2:69213967-69213986 | MS.gene25928:CDS | 60.0% | |
| GGGCGAGGGAGAAGGCTAAA+AGG | - | chr3.2:69214026-69214045 | MS.gene25928:CDS | 60.0% | |
| GTGATAATCGCGGCGAGTCC+TGG | - | chr3.2:69213113-69213132 | MS.gene25928:CDS | 60.0% | |
| GTGGTGTAATCCGGTGCGGT+TGG | + | chr3.2:69212915-69212934 | None:intergenic | 60.0% | |
| TGACGGGGACAATGGCGAGT+AGG | - | chr3.2:69213759-69213778 | MS.gene25928:CDS | 60.0% | |
| TGTTCCTACCTCCGGCAACC+CGG | + | chr3.2:69214150-69214169 | None:intergenic | 60.0% | |
| ! | TCACACGCCGTGACGGAGTT+AGG | - | chr3.2:69213044-69213063 | MS.gene25928:CDS | 60.0% |
| !! | CGGGTTGGGTTCCGTTTTGC+AGG | + | chr3.2:69212815-69212834 | None:intergenic | 60.0% |
| AGCTGGACTCCGAGGCGACA+AGG | - | chr3.2:69213885-69213904 | MS.gene25928:CDS | 65.0% | |
| CACCGTACACCCAACCGCAC+CGG | - | chr3.2:69212902-69212921 | MS.gene25928:CDS | 65.0% | |
| CGCACCGGATTACACCACCG+TGG | - | chr3.2:69212917-69212936 | MS.gene25928:CDS | 65.0% | |
| CGGGTGGGATGACTCGAACG+AGG | - | chr3.2:69214122-69214141 | MS.gene25928:CDS | 65.0% | |
| GACGGATAGGGCGAGGGAGA+AGG | - | chr3.2:69214018-69214037 | MS.gene25928:CDS | 65.0% | |
| GCTGGACTCCGAGGCGACAA+GGG | - | chr3.2:69213886-69213905 | MS.gene25928:CDS | 65.0% | |
| GGGGAATGAGCTGGACTCCG+AGG | - | chr3.2:69213877-69213896 | MS.gene25928:CDS | 65.0% | |
| GGGTTTCGCTATGCTCGCCG+CGG | - | chr3.2:69213339-69213358 | MS.gene25928:CDS | 65.0% | |
| GGTCGGAGTCTGAGCGAACG+AGG | - | chr3.2:69213636-69213655 | MS.gene25928:CDS | 65.0% | |
| GTGCGGTTGGGTGTACGGTG+CGG | + | chr3.2:69212902-69212921 | None:intergenic | 65.0% | |
| TGCGGTTGGGTGTACGGTGC+GGG | + | chr3.2:69212901-69212920 | None:intergenic | 65.0% | |
| !! | CGAACGAGGTACCGGGTTGC+CGG | - | chr3.2:69214136-69214155 | MS.gene25928:CDS | 65.0% |
| AGACGGGGACGGATAGGGCG+AGG | - | chr3.2:69214011-69214030 | MS.gene25928:CDS | 70.0% | |
| GACGGGGACGGATAGGGCGA+GGG | - | chr3.2:69214012-69214031 | MS.gene25928:CDS | 70.0% | |
| ! | GGTACCGGGTTGCCGGAGGT+AGG | - | chr3.2:69214143-69214162 | MS.gene25928:CDS | 70.0% |
| !! | ACGAGGTACCGGGTTGCCGG+AGG | - | chr3.2:69214139-69214158 | MS.gene25928:CDS | 70.0% |
| !! | CGCGGTGGCGGAGAATCCTC+CGG | - | chr3.2:69213013-69213032 | MS.gene25928:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69212618 | 69214198 | 69212618 | ID=MS.gene25928 |
| chr3.2 | mRNA | 69212618 | 69214198 | 69212618 | ID=MS.gene25928.t1;Parent=MS.gene25928 |
| chr3.2 | exon | 69212618 | 69214198 | 69212618 | ID=MS.gene25928.t1.exon1;Parent=MS.gene25928.t1 |
| chr3.2 | CDS | 69212618 | 69214198 | 69212618 | ID=cds.MS.gene25928.t1;Parent=MS.gene25928.t1 |
| Gene Sequence |
| Protein sequence |
