Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26152.t1 | XP_003616193.3 | 98.8 | 595 | 7 | 0 | 1 | 595 | 13 | 607 | 0.00E+00 | 1151.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26152.t1 | Q940S0 | 77.0 | 595 | 134 | 2 | 1 | 595 | 1 | 592 | 3.0e-259 | 895.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26152.t1 | A0A396HU32 | 98.8 | 595 | 7 | 0 | 1 | 595 | 13 | 607 | 0.0e+00 | 1151.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene26152 | -0.807994 | 3.85E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene26152 | -0.844448 | 7.51E-59 | -1.69E-46 |
| MS.gene049611 | MS.gene26152 | 0.804713 | 1.89E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene26152 | -0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene26152 | -0.848004 | 8.08E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene26152 | -0.823086 | 1.67E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene26152 | 0.84221 | 2.97E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene26152 | -0.823707 | 1.20E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene26152 | -0.841135 | 5.71E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene26152 | -0.815802 | 7.67E-52 | -1.69E-46 |
| MS.gene050647 | MS.gene26152 | 0.809103 | 2.23E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene26152 | -0.809281 | 2.05E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene26152 | -0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene26152 | -0.84986 | 2.47E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene26152 | -0.853353 | 2.53E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene26152 | -0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene26152 | 0.824485 | 7.87E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene26152 | 0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene26152 | 0.824357 | 8.43E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene26152 | 0.820571 | 6.39E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene26152 | -0.828189 | 1.03E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene26152 | -0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene26152 | -0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene26152 | 0.828091 | 1.09E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene26152 | -0.812369 | 4.39E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene26152 | 0.837681 | 4.50E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene26152 | -0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene26152 | 0.815519 | 8.87E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene26152 | 0.851585 | 8.06E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene26152 | -0.814386 | 1.58E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene26152 | -0.832767 | 7.83E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene26152 | -0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene26152 | -0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene26152 | -0.814059 | 1.87E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene26152 | -0.836515 | 8.94E-57 | -1.69E-46 |
| MS.gene056313 | MS.gene26152 | 0.806928 | 6.48E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene26152 | -0.814845 | 1.25E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene26152 | -0.847729 | 9.62E-60 | -1.69E-46 |
| MS.gene056857 | MS.gene26152 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene26152 | -0.811336 | 7.37E-51 | -1.69E-46 |
| MS.gene057768 | MS.gene26152 | 0.803873 | 2.83E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene26152 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene058108 | MS.gene26152 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene26152 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene26152 | 0.869318 | 3.39E-66 | -1.69E-46 |
| MS.gene058173 | MS.gene26152 | 0.853697 | 2.01E-61 | -1.69E-46 |
| MS.gene058174 | MS.gene26152 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene058175 | MS.gene26152 | 0.869636 | 2.67E-66 | -1.69E-46 |
| MS.gene058268 | MS.gene26152 | 0.808396 | 3.16E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene26152 | 0.80312 | 4.06E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene26152 | -0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene26152 | -0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene059037 | MS.gene26152 | 0.813688 | 2.26E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene26152 | 0.862798 | 3.93E-64 | -1.69E-46 |
| MS.gene059367 | MS.gene26152 | -0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene26152 | -0.85422 | 1.42E-61 | -1.69E-46 |
| MS.gene059916 | MS.gene26152 | 0.811267 | 7.63E-51 | -1.69E-46 |
| MS.gene059943 | MS.gene26152 | 0.809122 | 2.21E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene26152 | -0.811163 | 8.03E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene26152 | -0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene26152 | 0.824642 | 7.23E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene26152 | -0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene26152 | -0.811322 | 7.42E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene26152 | -0.839521 | 1.51E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene26152 | -0.814678 | 1.36E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene26152 | -0.830441 | 2.93E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26152.t1 | MTR_5g077170 | 98.983 | 590 | 6 | 0 | 6 | 595 | 2 | 591 | 0.0 | 1207 |
| MS.gene26152.t1 | MTR_6g074910 | 76.831 | 587 | 134 | 1 | 9 | 595 | 4 | 588 | 0.0 | 929 |
| MS.gene26152.t1 | MTR_4g053270 | 49.126 | 572 | 287 | 2 | 24 | 595 | 22 | 589 | 0.0 | 566 |
| MS.gene26152.t1 | MTR_8g088730 | 41.349 | 578 | 321 | 7 | 26 | 595 | 22 | 589 | 6.19e-151 | 447 |
| MS.gene26152.t1 | MTR_2g006300 | 41.941 | 577 | 317 | 8 | 26 | 595 | 18 | 583 | 1.82e-150 | 446 |
| MS.gene26152.t1 | MTR_8g016270 | 32.605 | 641 | 378 | 9 | 3 | 595 | 14 | 648 | 1.95e-114 | 355 |
| MS.gene26152.t1 | MTR_1g014080 | 32.353 | 646 | 377 | 11 | 1 | 595 | 1 | 637 | 7.47e-110 | 343 |
| MS.gene26152.t1 | MTR_3g105950 | 32.072 | 608 | 360 | 8 | 35 | 595 | 35 | 636 | 3.79e-105 | 331 |
| MS.gene26152.t1 | MTR_5g098730 | 27.151 | 674 | 401 | 16 | 1 | 595 | 3 | 665 | 3.62e-75 | 253 |
| MS.gene26152.t1 | MTR_0204s0010 | 31.542 | 428 | 272 | 8 | 178 | 595 | 32 | 448 | 8.34e-72 | 238 |
| MS.gene26152.t1 | MTR_3g082140 | 30.023 | 433 | 284 | 8 | 171 | 595 | 238 | 659 | 4.44e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26152.t1 | AT2G01970 | 77.336 | 578 | 130 | 1 | 18 | 595 | 16 | 592 | 0.0 | 927 |
| MS.gene26152.t1 | AT5G37310 | 76.361 | 588 | 138 | 1 | 8 | 595 | 7 | 593 | 0.0 | 925 |
| MS.gene26152.t1 | AT5G37310 | 76.361 | 588 | 138 | 1 | 8 | 595 | 7 | 593 | 0.0 | 925 |
| MS.gene26152.t1 | AT1G14670 | 76.975 | 595 | 134 | 2 | 1 | 595 | 1 | 592 | 0.0 | 916 |
| MS.gene26152.t1 | AT1G08350 | 48.048 | 589 | 301 | 4 | 8 | 595 | 5 | 589 | 0.0 | 580 |
| MS.gene26152.t1 | AT1G08350 | 48.048 | 589 | 301 | 4 | 8 | 595 | 5 | 589 | 0.0 | 580 |
| MS.gene26152.t1 | AT1G08350 | 47.535 | 507 | 262 | 3 | 90 | 595 | 5 | 508 | 8.33e-171 | 495 |
| MS.gene26152.t1 | AT1G08350 | 44.917 | 541 | 284 | 4 | 8 | 547 | 5 | 532 | 5.69e-169 | 491 |
| MS.gene26152.t1 | AT1G10950 | 40.663 | 573 | 324 | 7 | 29 | 595 | 27 | 589 | 1.54e-144 | 431 |
| MS.gene26152.t1 | AT3G13772 | 32.955 | 616 | 348 | 8 | 33 | 595 | 38 | 641 | 8.26e-115 | 356 |
| MS.gene26152.t1 | AT1G55130 | 32.955 | 616 | 348 | 9 | 33 | 595 | 34 | 637 | 2.71e-111 | 347 |
| MS.gene26152.t1 | AT5G10840 | 31.513 | 641 | 385 | 8 | 3 | 595 | 14 | 648 | 6.93e-108 | 338 |
| MS.gene26152.t1 | AT5G25100 | 30.901 | 644 | 389 | 8 | 2 | 595 | 7 | 644 | 1.31e-106 | 335 |
| MS.gene26152.t1 | AT5G25100 | 31.967 | 610 | 359 | 8 | 36 | 595 | 48 | 651 | 1.76e-104 | 329 |
| MS.gene26152.t1 | AT2G24170 | 32.538 | 587 | 344 | 7 | 56 | 595 | 56 | 637 | 2.83e-104 | 328 |
| MS.gene26152.t1 | AT5G35160 | 31.504 | 419 | 269 | 7 | 186 | 595 | 221 | 630 | 5.77e-64 | 222 |
| MS.gene26152.t1 | AT5G35160 | 31.504 | 419 | 269 | 7 | 186 | 595 | 249 | 658 | 7.40e-64 | 222 |
| MS.gene26152.t1 | AT5G35160 | 31.504 | 419 | 269 | 7 | 186 | 595 | 249 | 658 | 7.40e-64 | 222 |
| MS.gene26152.t1 | AT5G35160 | 31.504 | 419 | 269 | 7 | 186 | 595 | 249 | 658 | 7.40e-64 | 222 |
| MS.gene26152.t1 | AT4G12650 | 30.318 | 409 | 268 | 7 | 195 | 595 | 253 | 652 | 2.15e-60 | 212 |
| MS.gene26152.t1 | AT2G24170 | 28.753 | 393 | 229 | 6 | 56 | 401 | 56 | 444 | 3.98e-51 | 182 |
Find 113 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTAACCTCACCTTTAT+TGG | 0.159809 | 5.4:-57268296 | MS.gene26152:CDS |
| TTCCTTTGTGGTGGATCAAC+TGG | 0.175262 | 5.4:-57267481 | MS.gene26152:CDS |
| ACTATGATGACTTGCCAATT+TGG | 0.269300 | 5.4:-57270135 | MS.gene26152:CDS |
| ACCTCACCTTTATTGGTATT+GGG | 0.275560 | 5.4:-57268289 | MS.gene26152:CDS |
| TCAACTGGGTTGTTCATATA+TGG | 0.277084 | 5.4:-57267466 | MS.gene26152:CDS |
| AACCTCACCTTTATTGGTAT+TGG | 0.284277 | 5.4:-57268290 | MS.gene26152:CDS |
| TGCATTTCAGGTGAAAATTT+TGG | 0.287409 | 5.4:-57268449 | MS.gene26152:intron |
| ACTTCCATCCAGTCTCTTCT+TGG | 0.288713 | 5.4:+57269465 | None:intergenic |
| TTGGTATTGGGTGGGATTGC+TGG | 0.299301 | 5.4:-57268277 | MS.gene26152:CDS |
| CTATGATGACTTGCCAATTT+GGG | 0.300228 | 5.4:-57270134 | MS.gene26152:CDS |
| GTAGTAGAGTTCAATGAAAA+TGG | 0.321529 | 5.4:+57268126 | None:intergenic |
| GATATTAGGTCTTTCCTTTG+TGG | 0.336277 | 5.4:-57267493 | MS.gene26152:intron |
| TCATCAAGTGCTTCTTCATC+TGG | 0.337189 | 5.4:+57269488 | None:intergenic |
| AATGAACAAAATGCTGTATA+TGG | 0.340162 | 5.4:+57268069 | None:intergenic |
| CCCTTCAATCATGTAATAGA+AGG | 0.351238 | 5.4:+57268846 | None:intergenic |
| TTACGGTACCAAGGTAGTTT+AGG | 0.351664 | 5.4:+57268193 | None:intergenic |
| ATCCTCACTCTCACATCATT+TGG | 0.357975 | 5.4:-57269858 | MS.gene26152:CDS |
| CTTCCAAGGAAACCCCAAAT+TGG | 0.359340 | 5.4:+57270121 | None:intergenic |
| ATATTTATGCTTGCTCTAGT+TGG | 0.366853 | 5.4:-57268961 | MS.gene26152:CDS |
| TATGGTTTCTTTCTTATGCT+TGG | 0.371120 | 5.4:-57267355 | MS.gene26152:CDS |
| TAGTGCTGCAGTGGAGTTAT+AGG | 0.383154 | 5.4:+57268357 | None:intergenic |
| ATCAAGAATTCAAGTTTGTA+AGG | 0.385654 | 5.4:+57270256 | None:intergenic |
| ATCCCACCCAATACCAATAA+AGG | 0.387694 | 5.4:+57268283 | None:intergenic |
| CAGATATTCCATTTGAGAAA+AGG | 0.390734 | 5.4:-57269901 | MS.gene26152:CDS |
| TTGCCAATTTGGGGTTTCCT+TGG | 0.391409 | 5.4:-57270124 | MS.gene26152:CDS |
| ATTTCACATATTCTGTCAAA+TGG | 0.396091 | 5.4:-57269931 | MS.gene26152:CDS |
| TTCGCCGCAGCACTTGGAAC+AGG | 0.404698 | 5.4:-57269398 | MS.gene26152:CDS |
| CCCACCTTGTTTGCATAAAA+CGG | 0.409711 | 5.4:+57271499 | None:intergenic |
| AAACTAACCTGGTGAACAAA+AGG | 0.409921 | 5.4:+57270443 | None:intergenic |
| GGAAAAGTCAACGACATGTT+TGG | 0.412145 | 5.4:-57271614 | MS.gene26152:CDS |
| GCGAACAAAGACTTAAATCT+TGG | 0.421824 | 5.4:+57269416 | None:intergenic |
| CACATCATTTGGAAATCCAT+TGG | 0.423796 | 5.4:-57269847 | MS.gene26152:CDS |
| GAAGGAAGCTGCAGAATAAC+CGG | 0.424677 | 5.4:+57268864 | None:intergenic |
| TCCACTGCAGCACTACCCTT+TGG | 0.427646 | 5.4:-57268349 | MS.gene26152:CDS |
| AACAAAGCTCCCCTGTTGTA+TGG | 0.432106 | 5.4:+57268928 | None:intergenic |
| GCATTAACGTCCGGCATTGC+CGG | 0.432563 | 5.4:-57268883 | MS.gene26152:CDS |
| TCCTTCTATTACATGATTGA+AGG | 0.433770 | 5.4:-57268847 | MS.gene26152:CDS |
| GGGAGCTTTGTTTACTGCAC+TGG | 0.435481 | 5.4:-57268917 | MS.gene26152:CDS |
| CCGTAAAACTCTTCCTCAAA+TGG | 0.437640 | 5.4:-57268176 | MS.gene26152:CDS |
| TCTGAGCTATTCACACTTGA+GGG | 0.440042 | 5.4:+57267282 | None:intergenic |
| TTTCTTATGCTTGGAACTGT+GGG | 0.441101 | 5.4:-57267346 | MS.gene26152:CDS |
| GTCAAGTCCACAACAGCATT+CGG | 0.447696 | 5.4:+57269977 | None:intergenic |
| AATCTCCCTCGGATACTTGT+TGG | 0.451259 | 5.4:+57268216 | None:intergenic |
| CACCTTTATTGGTATTGGGT+GGG | 0.453576 | 5.4:-57268285 | MS.gene26152:CDS |
| CATCAGTTTCAAATCTTCCA+AGG | 0.455164 | 5.4:+57270107 | None:intergenic |
| CTTTCTTATGCTTGGAACTG+TGG | 0.458480 | 5.4:-57267347 | MS.gene26152:CDS |
| GAGAATCATGGCAAGGAATC+CGG | 0.464820 | 5.4:+57269784 | None:intergenic |
| GAAGAAAAGAAAGAAGATCT+TGG | 0.467281 | 5.4:-57270313 | MS.gene26152:CDS |
| TCTTTGTTCGCCGCAGCACT+TGG | 0.467861 | 5.4:-57269404 | MS.gene26152:CDS |
| GTTACTGTTCTTCTCTTGAC+CGG | 0.473664 | 5.4:-57269803 | MS.gene26152:CDS |
| ATTAGGTCTTTCCTTTGTGG+TGG | 0.477997 | 5.4:-57267490 | MS.gene26152:intron |
| ATCTAACCTGGGATTATGAA+AGG | 0.482130 | 5.4:+57271474 | None:intergenic |
| TCCTTTGTGGTGGATCAACT+GGG | 0.485374 | 5.4:-57267480 | MS.gene26152:CDS |
| TACATGGCTTGCATTTGCTA+TGG | 0.488624 | 5.4:-57267373 | MS.gene26152:CDS |
| TGCAGAATAACCGGCAATGC+CGG | 0.490602 | 5.4:+57268873 | None:intergenic |
| TTTATTGAATGCAGAAAATG+TGG | 0.491207 | 5.4:-57270335 | MS.gene26152:intron |
| ACTACATATTTGCCAGTGTG+TGG | 0.492038 | 5.4:-57268108 | MS.gene26152:CDS |
| CATGCAAGATCAGATATGTC+TGG | 0.493757 | 5.4:-57267424 | MS.gene26152:CDS |
| AACTCTTCCTCAAATGGCTA+TGG | 0.495729 | 5.4:-57268170 | MS.gene26152:CDS |
| TTAACTGGTAGTCTATTCTC+TGG | 0.501357 | 5.4:-57268424 | MS.gene26152:CDS |
| CTACATATTTGCCAGTGTGT+GGG | 0.507683 | 5.4:-57268107 | MS.gene26152:CDS |
| CTTCCTCAAATGGCTATGGC+TGG | 0.509056 | 5.4:-57268166 | MS.gene26152:CDS |
| TCAGATCATCGTTATAAAGA+AGG | 0.510924 | 5.4:-57271532 | MS.gene26152:CDS |
| AATCCAGCCATAGCCATTTG+AGG | 0.511166 | 5.4:+57268163 | None:intergenic |
| AGAAGATAGAGAGGTAAATG+TGG | 0.520334 | 5.4:-57269954 | MS.gene26152:CDS |
| TATTCCATTTGAGAAAAGGT+TGG | 0.520532 | 5.4:-57269897 | MS.gene26152:CDS |
| TGGGACCCTTTCATAATCCC+AGG | 0.520558 | 5.4:-57271480 | MS.gene26152:intron |
| AAGTACGCGCATGAGAATCA+TGG | 0.523656 | 5.4:+57269772 | None:intergenic |
| CCTTCTATTACATGATTGAA+GGG | 0.526700 | 5.4:-57268846 | MS.gene26152:CDS |
| GTCATATACGCATTAACGTC+CGG | 0.529722 | 5.4:-57268892 | MS.gene26152:CDS |
| TTCTGAGCTATTCACACTTG+AGG | 0.535196 | 5.4:+57267281 | None:intergenic |
| TCACCTTTATTGGTATTGGG+TGG | 0.535989 | 5.4:-57268286 | MS.gene26152:CDS |
| AATAACCACAATTGTTCCAA+AGG | 0.538698 | 5.4:+57268333 | None:intergenic |
| AACTAACCTGGTGAACAAAA+GGG | 0.541607 | 5.4:+57270444 | None:intergenic |
| AAGGTGCTTGAAACTCTGAT+TGG | 0.544875 | 5.4:+57268245 | None:intergenic |
| TCTAACCTGGGATTATGAAA+GGG | 0.548279 | 5.4:+57271475 | None:intergenic |
| TACATATTTGCCAGTGTGTG+GGG | 0.552002 | 5.4:-57268106 | MS.gene26152:CDS |
| TCAATGAAAATGGCACTGAA+TGG | 0.553149 | 5.4:+57268136 | None:intergenic |
| CTTGATGACCAAGAAGAGAC+TGG | 0.553949 | 5.4:-57269473 | MS.gene26152:CDS |
| AAAGATGCTGACAAGAAAAG+AGG | 0.554105 | 5.4:-57270206 | MS.gene26152:CDS |
| ATACTTTCAACTTGCTGCTG+AGG | 0.554818 | 5.4:-57267996 | MS.gene26152:CDS |
| CTGAGGATCATGAATGGTGG+TGG | 0.559393 | 5.4:-57267979 | MS.gene26152:CDS |
| TCCAAAGGGTAGTGCTGCAG+TGG | 0.561479 | 5.4:+57268348 | None:intergenic |
| ACTACCCTTTGGAACAATTG+TGG | 0.569004 | 5.4:-57268338 | MS.gene26152:CDS |
| ACTTGAGGGAACGGTATATG+TGG | 0.569759 | 5.4:+57267296 | None:intergenic |
| TATGATGACTTGCCAATTTG+GGG | 0.574034 | 5.4:-57270133 | MS.gene26152:CDS |
| AAATGATCCGAATGCTGTTG+TGG | 0.575333 | 5.4:-57269984 | MS.gene26152:CDS |
| ATAACCACAATTGTTCCAAA+GGG | 0.579246 | 5.4:+57268334 | None:intergenic |
| GGATACTTGTTGGTTCGACA+AGG | 0.582998 | 5.4:+57268226 | None:intergenic |
| ATGACCAAGAAGAGACTGGA+TGG | 0.583101 | 5.4:-57269469 | MS.gene26152:CDS |
| AAAAGATGTTGACACAAATG+AGG | 0.586558 | 5.4:-57270083 | MS.gene26152:CDS |
| AGTTAATAATAGAAAACCAA+TGG | 0.587731 | 5.4:+57269831 | None:intergenic |
| GACATTCAGCTTTCTTAACA+CGG | 0.594648 | 5.4:-57268389 | MS.gene26152:CDS |
| GGGAGATTCCTAAACTACCT+TGG | 0.601031 | 5.4:-57268201 | MS.gene26152:CDS |
| TTGCTGCTGAGGATCATGAA+TGG | 0.608218 | 5.4:-57267985 | MS.gene26152:CDS |
| CAGACATATCTGATCTTGCA+TGG | 0.613786 | 5.4:+57267425 | None:intergenic |
| GCTATTCACACTTGAGGGAA+CGG | 0.614276 | 5.4:+57267287 | None:intergenic |
| CGCGCATGAGAATCATGGCA+AGG | 0.619445 | 5.4:+57269777 | None:intergenic |
| CTGCTGAGGATCATGAATGG+TGG | 0.620026 | 5.4:-57267982 | MS.gene26152:CDS |
| ACTGGATGGAAGTATATCCA+TGG | 0.622758 | 5.4:-57269455 | MS.gene26152:CDS |
| GTCGAACCAACAAGTATCCG+AGG | 0.624487 | 5.4:-57268222 | MS.gene26152:CDS |
| AATCTGATGACCCCACACAC+TGG | 0.627045 | 5.4:+57268096 | None:intergenic |
| AGGATCATGAATGGTGGTGG+AGG | 0.635786 | 5.4:-57267976 | MS.gene26152:intron |
| GGACTTGACAGAAGATAGAG+AGG | 0.642544 | 5.4:-57269963 | MS.gene26152:CDS |
| TTATACAGCAGAAACAACAT+AGG | 0.656465 | 5.4:+57271575 | None:intergenic |
| GATATCTAAACACATCACCA+TGG | 0.657708 | 5.4:+57269438 | None:intergenic |
| GGTAGTTTAGGAATCTCCCT+CGG | 0.664868 | 5.4:+57268205 | None:intergenic |
| ACCCAATACCAATAAAGGTG+AGG | 0.665590 | 5.4:+57268288 | None:intergenic |
| TTCCAAATGATGTGAGAGTG+AGG | 0.670818 | 5.4:+57269856 | None:intergenic |
| TCGAACCAACAAGTATCCGA+GGG | 0.672144 | 5.4:-57268221 | MS.gene26152:CDS |
| ACCCAGTTGATCCACCACAA+AGG | 0.682810 | 5.4:+57267479 | None:intergenic |
| AGTGCCTGTTCCAAGTGCTG+CGG | 0.689872 | 5.4:+57269394 | None:intergenic |
| GAAACAACATAGGATCACAA+TGG | 0.705943 | 5.4:+57271585 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATATGAAAAAATT+GGG | - | chr5.4:57267528-57267547 | MS.gene26152:intron | 10.0% |
| !! | TGAAAAAAATATGAAAAAAT+TGG | - | chr5.4:57267527-57267546 | MS.gene26152:intron | 10.0% |
| !!! | AGATCAAAATATATTTTAAA+AGG | + | chr5.4:57267483-57267502 | None:intergenic | 10.0% |
| !!! | ATTAAATAGTATAATTTTTG+TGG | - | chr5.4:57268124-57268143 | MS.gene26152:CDS | 10.0% |
| !!! | GATCAAAATATATTTTAAAA+GGG | + | chr5.4:57267482-57267501 | None:intergenic | 10.0% |
| !!! | TTTTTTTCAAAAGTATAAAT+TGG | + | chr5.4:57267516-57267535 | None:intergenic | 10.0% |
| !! | AAATGACAAGTTATAAAATA+TGG | + | chr5.4:57271383-57271402 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr5.4:57269751-57269770 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr5.4:57269750-57269769 | MS.gene26152:intron | 15.0% |
| !! | GAAAAAAATATCAATGTTAT+GGG | - | chr5.4:57271017-57271036 | MS.gene26152:intron | 15.0% |
| !! | TGAAAAAAATATCAATGTTA+TGG | - | chr5.4:57271016-57271035 | MS.gene26152:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr5.4:57269624-57269643 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr5.4:57269727-57269746 | None:intergenic | 15.0% |
| !! | AAAAACAACTGGAAAAAAAA+AGG | + | chr5.4:57270362-57270381 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr5.4:57269741-57269760 | MS.gene26152:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr5.4:57269784-57269803 | None:intergenic | 20.0% |
| !! | ACATAACAAAATATTACGAT+AGG | - | chr5.4:57269387-57269406 | MS.gene26152:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr5.4:57269664-57269683 | None:intergenic | 20.0% |
| !! | AGTTAATAATAGAAAACCAA+TGG | + | chr5.4:57269076-57269095 | None:intergenic | 20.0% |
| !! | ATTTATTTATCTCAGTAGTA+TGG | - | chr5.4:57269186-57269205 | MS.gene26152:intron | 20.0% |
| !! | TAGTTTATTCATCAGAATTT+AGG | - | chr5.4:57270990-57271009 | MS.gene26152:intron | 20.0% |
| !! | TTGAAAACTATTATTAGATC+AGG | + | chr5.4:57271094-57271113 | None:intergenic | 20.0% |
| !!! | AAGACAGTAATAGAAAATTT+TGG | + | chr5.4:57268512-57268531 | None:intergenic | 20.0% |
| !!! | AGACAGTAATAGAAAATTTT+GGG | + | chr5.4:57268511-57268530 | None:intergenic | 20.0% |
| !!! | CAATAAATTTTGGAACTATA+AGG | + | chr5.4:57268556-57268575 | None:intergenic | 20.0% |
| !!! | GTCATTTTCTTAAAAATATG+TGG | + | chr5.4:57271307-57271326 | None:intergenic | 20.0% |
| !!! | TCATTTTTCTACATGATATT+AGG | - | chr5.4:57271397-57271416 | MS.gene26152:intron | 20.0% |
| !!! | TTGTGGTTATTTTCTTAATA+TGG | - | chr5.4:57270583-57270602 | MS.gene26152:intron | 20.0% |
| !!! | TTTCTGCATTCAATAAATTT+TGG | + | chr5.4:57268566-57268585 | None:intergenic | 20.0% |
| !!! | TTTTCAAAAGTATAAATTGG+AGG | + | chr5.4:57267513-57267532 | None:intergenic | 20.0% |
| ! | AAATGAACACACTTCAATAT+AGG | + | chr5.4:57268065-57268084 | None:intergenic | 25.0% |
| ! | AAGCATTAAAAATCTAACCT+GGG | + | chr5.4:57267444-57267463 | None:intergenic | 25.0% |
| ! | AATGAACAAAATGCTGTATA+TGG | + | chr5.4:57270838-57270857 | None:intergenic | 25.0% |
| ! | AATGAACACACTTCAATATA+GGG | + | chr5.4:57268064-57268083 | None:intergenic | 25.0% |
| ! | ATCAAGAATTTCTTCCTAAA+TGG | - | chr5.4:57268365-57268384 | MS.gene26152:CDS | 25.0% |
| ! | ATTACTTTCAATCGTGTTAA+AGG | + | chr5.4:57270385-57270404 | None:intergenic | 25.0% |
| ! | ATTCCTAAAAAGATAAACTG+TGG | + | chr5.4:57268847-57268866 | None:intergenic | 25.0% |
| ! | ATTTCACATATTCTGTCAAA+TGG | - | chr5.4:57268973-57268992 | MS.gene26152:CDS | 25.0% |
| ! | GAACCTAAATAAGTAGTAAA+AGG | + | chr5.4:57270147-57270166 | None:intergenic | 25.0% |
| ! | TATTAACAAAGTAGCCATTT+AGG | + | chr5.4:57268382-57268401 | None:intergenic | 25.0% |
| ! | TCAGTTAAAGATGAATTGTT+CGG | + | chr5.4:57268253-57268272 | None:intergenic | 25.0% |
| ! | TTAGTGCTTCAATAAAATCA+TGG | - | chr5.4:57267680-57267699 | MS.gene26152:intron | 25.0% |
| ! | TTTATTGAATGCAGAAAATG+TGG | - | chr5.4:57268569-57268588 | MS.gene26152:intron | 25.0% |
| ! | TTTATTGTCAAGATAAGCTA+TGG | + | chr5.4:57267972-57267991 | None:intergenic | 25.0% |
| !! | AAAGCATTAAAAATCTAACC+TGG | + | chr5.4:57267445-57267464 | None:intergenic | 25.0% |
| !! | ATCAAGAATTCAAGTTTGTA+AGG | + | chr5.4:57268651-57268670 | None:intergenic | 25.0% |
| !! | ATGCAAACTTCTTTCTTTTT+CGG | - | chr5.4:57271507-57271526 | MS.gene26152:CDS | 25.0% |
| !! | GTAATGGAATGAAATCTTAA+TGG | - | chr5.4:57267585-57267604 | MS.gene26152:intron | 25.0% |
| !! | TCTAAAAAGTAGAGGTATAA+GGG | - | chr5.4:57271244-57271263 | MS.gene26152:intron | 25.0% |
| !!! | AAACAACACTCATTTTGAAA+CGG | - | chr5.4:57269833-57269852 | MS.gene26152:CDS | 25.0% |
| !!! | CTTTTATCTTTGTCATTTGA+TGG | - | chr5.4:57268019-57268038 | MS.gene26152:CDS | 25.0% |
| !!! | TTCAAAATGAGTGTTGTTTT+AGG | + | chr5.4:57269832-57269851 | None:intergenic | 25.0% |
| AAAACTATTTATGCATGCCA+AGG | + | chr5.4:57271070-57271089 | None:intergenic | 30.0% | |
| AAAAGATGTTGACACAAATG+AGG | - | chr5.4:57268821-57268840 | MS.gene26152:intron | 30.0% | |
| AAGCTGAATGTCAAAAACAA+TGG | + | chr5.4:57270507-57270526 | None:intergenic | 30.0% | |
| AAGTTCCACAAACTAGTAAA+TGG | + | chr5.4:57269358-57269377 | None:intergenic | 30.0% | |
| AATAACCACAATTGTTCCAA+AGG | + | chr5.4:57270574-57270593 | None:intergenic | 30.0% | |
| ACATGATTGAAGGGAAAAAT+TGG | - | chr5.4:57270067-57270086 | MS.gene26152:CDS | 30.0% | |
| ATAACCACAATTGTTCCAAA+GGG | + | chr5.4:57270573-57270592 | None:intergenic | 30.0% | |
| ATATTTATGCTTGCTCTAGT+TGG | - | chr5.4:57269943-57269962 | MS.gene26152:CDS | 30.0% | |
| ATGAAAATAGCTCGAAATTG+TGG | + | chr5.4:57269326-57269345 | None:intergenic | 30.0% | |
| ATGGAATGAAATCTTAATGG+TGG | - | chr5.4:57267588-57267607 | MS.gene26152:intron | 30.0% | |
| CAACTGGAAAAAAAAAGGAA+AGG | + | chr5.4:57270357-57270376 | None:intergenic | 30.0% | |
| CAATTGTTGGATGAATTTAG+TGG | - | chr5.4:57271215-57271234 | MS.gene26152:intron | 30.0% | |
| CAGATATTCCATTTGAGAAA+AGG | - | chr5.4:57269003-57269022 | MS.gene26152:intron | 30.0% | |
| CAGTTAAAGATGAATTGTTC+GGG | + | chr5.4:57268252-57268271 | None:intergenic | 30.0% | |
| CATGATTGAAGGGAAAAATT+GGG | - | chr5.4:57270068-57270087 | MS.gene26152:CDS | 30.0% | |
| CCTTCTATTACATGATTGAA+GGG | - | chr5.4:57270058-57270077 | MS.gene26152:CDS | 30.0% | |
| CTAAATAAGTAGTAAAAGGC+AGG | + | chr5.4:57270143-57270162 | None:intergenic | 30.0% | |
| CTAAGTCATTGGATAAAGAT+CGG | - | chr5.4:57270223-57270242 | MS.gene26152:CDS | 30.0% | |
| GAAGAAAAGAAAGAAGATCT+TGG | - | chr5.4:57268591-57268610 | MS.gene26152:intron | 30.0% | |
| GAGAGATTAGATGAATTAAG+AGG | + | chr5.4:57271196-57271215 | None:intergenic | 30.0% | |
| GGATTACACTTATCAAGTAT+TGG | - | chr5.4:57270427-57270446 | MS.gene26152:intron | 30.0% | |
| GTAGTAGAGTTCAATGAAAA+TGG | + | chr5.4:57270781-57270800 | None:intergenic | 30.0% | |
| TACACATAACCAAATTACGA+CGG | + | chr5.4:57267732-57267751 | None:intergenic | 30.0% | |
| TATGGTTTCTTTCTTATGCT+TGG | - | chr5.4:57271549-57271568 | MS.gene26152:CDS | 30.0% | |
| TATTCCATTTGAGAAAAGGT+TGG | - | chr5.4:57269007-57269026 | MS.gene26152:intron | 30.0% | |
| TCAGATCATCGTTATAAAGA+AGG | - | chr5.4:57267372-57267391 | MS.gene26152:CDS | 30.0% | |
| TCATCTAATCTCTCAATTGT+TGG | - | chr5.4:57271202-57271221 | MS.gene26152:intron | 30.0% | |
| TCCTTCTATTACATGATTGA+AGG | - | chr5.4:57270057-57270076 | MS.gene26152:CDS | 30.0% | |
| TTATACAGCAGAAACAACAT+AGG | + | chr5.4:57267332-57267351 | None:intergenic | 30.0% | |
| TTCATTCCATTACAGAATTC+TGG | + | chr5.4:57267578-57267597 | None:intergenic | 30.0% | |
| ! | ATACCATTAGTACTTTGAGA+AGG | + | chr5.4:57269562-57269581 | None:intergenic | 30.0% |
| ! | CTAAAAAGTAGAGGTATAAG+GGG | - | chr5.4:57271245-57271264 | MS.gene26152:intron | 30.0% |
| ! | CTCTAAAAAGTAGAGGTATA+AGG | - | chr5.4:57271243-57271262 | MS.gene26152:intron | 30.0% |
| ! | CTCTTTTGTGACTATATACT+TGG | - | chr5.4:57269896-57269915 | MS.gene26152:CDS | 30.0% |
| ! | CTGCCTTTTACTACTTATTT+AGG | - | chr5.4:57270141-57270160 | MS.gene26152:CDS | 30.0% |
| ! | CTTGGTTGGTTAAATCTAAA+TGG | - | chr5.4:57268300-57268319 | MS.gene26152:CDS | 30.0% |
| ! | TATCTTTGTCATTTGATGGT+AGG | - | chr5.4:57268023-57268042 | MS.gene26152:CDS | 30.0% |
| ! | TGTTTTCTATCCATACAACA+GGG | - | chr5.4:57269966-57269985 | MS.gene26152:CDS | 30.0% |
| ! | TTACCTTCTCAAAGTACTAA+TGG | - | chr5.4:57269556-57269575 | MS.gene26152:intron | 30.0% |
| ! | TTAGACCATTTACTAGTTTG+TGG | - | chr5.4:57269350-57269369 | MS.gene26152:intron | 30.0% |
| !! | TGCATTTCAGGTGAAAATTT+TGG | - | chr5.4:57270455-57270474 | MS.gene26152:CDS | 30.0% |
| !! | TTGACAATAAAGTATTGCTC+TGG | - | chr5.4:57267981-57268000 | MS.gene26152:CDS | 30.0% |
| !!! | CTTATACCTCTACTTTTTAG+AGG | + | chr5.4:57271245-57271264 | None:intergenic | 30.0% |
| !!! | GTGAAAATTTTGGTGTTAAC+TGG | - | chr5.4:57270465-57270484 | MS.gene26152:CDS | 30.0% |
| AAACGGAGGGAGTAATATAA+AGG | - | chr5.4:57269850-57269869 | MS.gene26152:CDS | 35.0% | |
| AAACTAACCTGGTGAACAAA+AGG | + | chr5.4:57268464-57268483 | None:intergenic | 35.0% | |
| AAAGATGCTGACAAGAAAAG+AGG | - | chr5.4:57268698-57268717 | MS.gene26152:intron | 35.0% | |
| AAATAGCTCGAAATTGTGGT+AGG | + | chr5.4:57269322-57269341 | None:intergenic | 35.0% | |
| AACCTCACCTTTATTGGTAT+TGG | - | chr5.4:57270614-57270633 | MS.gene26152:intron | 35.0% | |
| AACTAACCTGGTGAACAAAA+GGG | + | chr5.4:57268463-57268482 | None:intergenic | 35.0% | |
| AATATCTGTATGTCTCACTG+TGG | + | chr5.4:57268432-57268451 | None:intergenic | 35.0% | |
| AATGATTTATGCAGTCACTG+CGG | - | chr5.4:57270191-57270210 | MS.gene26152:CDS | 35.0% | |
| ACACATAACCAAATTACGAC+GGG | + | chr5.4:57267731-57267750 | None:intergenic | 35.0% | |
| ACCATTCCAGAATTCTGTAA+TGG | - | chr5.4:57267569-57267588 | MS.gene26152:intron | 35.0% | |
| ACCTCACCTTTATTGGTATT+GGG | - | chr5.4:57270615-57270634 | MS.gene26152:intron | 35.0% | |
| ACTTGTAACCTCACCTTTAT+TGG | - | chr5.4:57270608-57270627 | MS.gene26152:intron | 35.0% | |
| AGAAGATAGAGAGGTAAATG+TGG | - | chr5.4:57268950-57268969 | MS.gene26152:CDS | 35.0% | |
| AGCACTTGAGTTTAATCACT+TGG | - | chr5.4:57268282-57268301 | MS.gene26152:CDS | 35.0% | |
| ATCTAACCTGGGATTATGAA+AGG | + | chr5.4:57267433-57267452 | None:intergenic | 35.0% | |
| CAAATTACGACGGGTAAATT+TGG | + | chr5.4:57267722-57267741 | None:intergenic | 35.0% | |
| CAAATTTACCCGTCGTAATT+TGG | - | chr5.4:57267720-57267739 | MS.gene26152:intron | 35.0% | |
| CACATCATTTGGAAATCCAT+TGG | - | chr5.4:57269057-57269076 | MS.gene26152:intron | 35.0% | |
| CATCAGTTTCAAATCTTCCA+AGG | + | chr5.4:57268800-57268819 | None:intergenic | 35.0% | |
| CCCTTCAATCATGTAATAGA+AGG | + | chr5.4:57270061-57270080 | None:intergenic | 35.0% | |
| CGTGTTAAAGGAAAAACAAC+TGG | + | chr5.4:57270373-57270392 | None:intergenic | 35.0% | |
| CTTGAGTTTAATCACTTGGT+TGG | - | chr5.4:57268286-57268305 | MS.gene26152:CDS | 35.0% | |
| GAAACAACATAGGATCACAA+TGG | + | chr5.4:57267322-57267341 | None:intergenic | 35.0% | |
| GACATTCAGCTTTCTTAACA+CGG | - | chr5.4:57270515-57270534 | MS.gene26152:intron | 35.0% | |
| GATATCTAAACACATCACCA+TGG | + | chr5.4:57269469-57269488 | None:intergenic | 35.0% | |
| GATATTAGGTCTTTCCTTTG+TGG | - | chr5.4:57271411-57271430 | MS.gene26152:intron | 35.0% | |
| GCGAACAAAGACTTAAATCT+TGG | + | chr5.4:57269491-57269510 | None:intergenic | 35.0% | |
| TCAACTGGGTTGTTCATATA+TGG | - | chr5.4:57271438-57271457 | MS.gene26152:intron | 35.0% | |
| TCTAACCTGGGATTATGAAA+GGG | + | chr5.4:57267432-57267451 | None:intergenic | 35.0% | |
| TCTTAGACAGCATAAACAGT+CGG | - | chr5.4:57270103-57270122 | MS.gene26152:CDS | 35.0% | |
| TGAATACCATCAAACTAACC+TGG | + | chr5.4:57268475-57268494 | None:intergenic | 35.0% | |
| TGTGGCAGAAAAAAATGTCA+AGG | + | chr5.4:57268414-57268433 | None:intergenic | 35.0% | |
| TTAACTGGTAGTCTATTCTC+TGG | - | chr5.4:57270480-57270499 | MS.gene26152:intron | 35.0% | |
| TTTCTTATGCTTGGAACTGT+GGG | - | chr5.4:57271558-57271577 | MS.gene26152:CDS | 35.0% | |
| ! | ACTATGATGACTTGCCAATT+TGG | - | chr5.4:57268769-57268788 | MS.gene26152:intron | 35.0% |
| ! | AGGCCACAGTTTATCTTTTT+AGG | - | chr5.4:57268841-57268860 | MS.gene26152:CDS | 35.0% |
| ! | CCATTTGAGGAAGAGTTTTA+CGG | + | chr5.4:57270731-57270750 | None:intergenic | 35.0% |
| ! | CTATGATGACTTGCCAATTT+GGG | - | chr5.4:57268770-57268789 | MS.gene26152:intron | 35.0% |
| ! | CTTTTCTTGTCAGCATCTTT+TGG | + | chr5.4:57268698-57268717 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr5.4:57269702-57269721 | None:intergenic | 35.0% |
| ! | GTATTGGTATGTTGCATTTC+AGG | - | chr5.4:57270443-57270462 | MS.gene26152:intron | 35.0% |
| ! | GTGTTTTCTATCCATACAAC+AGG | - | chr5.4:57269965-57269984 | MS.gene26152:CDS | 35.0% |
| ! | GTTTATGCTGTCTAAGATGA+TGG | + | chr5.4:57270100-57270119 | None:intergenic | 35.0% |
| ! | GTTTTCTATCCATACAACAG+GGG | - | chr5.4:57269967-57269986 | MS.gene26152:CDS | 35.0% |
| ! | TATGATGACTTGCCAATTTG+GGG | - | chr5.4:57268771-57268790 | MS.gene26152:intron | 35.0% |
| ! | TCAATGAAAATGGCACTGAA+TGG | + | chr5.4:57270771-57270790 | None:intergenic | 35.0% |
| ! | TCATTGATTGTTGTGAATCC+AGG | + | chr5.4:57270176-57270195 | None:intergenic | 35.0% |
| ! | TCCATTACAGAATTCTGGAA+TGG | + | chr5.4:57267573-57267592 | None:intergenic | 35.0% |
| ! | TGTACCGTTTTATGCAAACA+AGG | - | chr5.4:57267401-57267420 | MS.gene26152:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr5.4:57269698-57269717 | None:intergenic | 35.0% |
| ! | TTCTCCAACCTTTTCTCAAA+TGG | + | chr5.4:57269014-57269033 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr5.4:57269598-57269617 | None:intergenic | 35.0% |
| !! | AATCTTAATGGTGGATGAAG+AGG | - | chr5.4:57267597-57267616 | MS.gene26152:intron | 35.0% |
| !! | CTTTTGATTGTCACTGCTTT+TGG | - | chr5.4:57270870-57270889 | MS.gene26152:intron | 35.0% |
| !!! | AACACTCATTTTGAAACGGA+GGG | - | chr5.4:57269837-57269856 | MS.gene26152:CDS | 35.0% |
| !!! | AATTGGGTTGTGTCATTTTG+AGG | - | chr5.4:57267544-57267563 | MS.gene26152:intron | 35.0% |
| !!! | ATTCAGACATGCTGTTTTGA+AGG | - | chr5.4:57268728-57268747 | MS.gene26152:intron | 35.0% |
| !!! | GATCTTGGTGAAGTTTTGAA+TGG | - | chr5.4:57268606-57268625 | MS.gene26152:intron | 35.0% |
| !!! | TACCTCTACTTTTTAGAGGT+CGG | + | chr5.4:57271241-57271260 | None:intergenic | 35.0% |
| !!! | TTCTTTCTTTTTCGGCTACA+TGG | - | chr5.4:57271515-57271534 | MS.gene26152:CDS | 35.0% |
| AAATGATCCGAATGCTGTTG+TGG | - | chr5.4:57268920-57268939 | MS.gene26152:CDS | 40.0% | |
| AACTCTTCCTCAAATGGCTA+TGG | - | chr5.4:57270734-57270753 | MS.gene26152:intron | 40.0% | |
| ACCCAATACCAATAAAGGTG+AGG | + | chr5.4:57270619-57270638 | None:intergenic | 40.0% | |
| ACTACATATTTGCCAGTGTG+TGG | - | chr5.4:57270796-57270815 | MS.gene26152:intron | 40.0% | |
| ATCCCACCCAATACCAATAA+AGG | + | chr5.4:57270624-57270643 | None:intergenic | 40.0% | |
| ATCCTCACTCTCACATCATT+TGG | - | chr5.4:57269046-57269065 | MS.gene26152:intron | 40.0% | |
| ATTAGGTCTTTCCTTTGTGG+TGG | - | chr5.4:57271414-57271433 | MS.gene26152:intron | 40.0% | |
| CACGATTGAAAGTAATACCG+TGG | - | chr5.4:57270389-57270408 | MS.gene26152:intron | 40.0% | |
| CAGACATATCTGATCTTGCA+TGG | + | chr5.4:57271482-57271501 | None:intergenic | 40.0% | |
| CATGCAAGATCAGATATGTC+TGG | - | chr5.4:57271480-57271499 | MS.gene26152:intron | 40.0% | |
| CCAAGGTGATTGTGTTTGAA+TGG | + | chr5.4:57271053-57271072 | None:intergenic | 40.0% | |
| CCATTCAAACACAATCACCT+TGG | - | chr5.4:57271050-57271069 | MS.gene26152:intron | 40.0% | |
| CCGTAAAACTCTTCCTCAAA+TGG | - | chr5.4:57270728-57270747 | MS.gene26152:intron | 40.0% | |
| CTACATATTTGCCAGTGTGT+GGG | - | chr5.4:57270797-57270816 | MS.gene26152:intron | 40.0% | |
| CTTTCTTATGCTTGGAACTG+TGG | - | chr5.4:57271557-57271576 | MS.gene26152:CDS | 40.0% | |
| GGAAAAGTCAACGACATGTT+TGG | - | chr5.4:57267290-57267309 | MS.gene26152:CDS | 40.0% | |
| GGTCAGTTGATCTAAGTCAT+TGG | - | chr5.4:57270212-57270231 | MS.gene26152:CDS | 40.0% | |
| GGTGATTGTGTTTGAATGGA+AGG | + | chr5.4:57271049-57271068 | None:intergenic | 40.0% | |
| GTCATATACGCATTAACGTC+CGG | - | chr5.4:57270012-57270031 | MS.gene26152:CDS | 40.0% | |
| GTTACTGTTCTTCTCTTGAC+CGG | - | chr5.4:57269101-57269120 | MS.gene26152:intron | 40.0% | |
| TACATATTTGCCAGTGTGTG+GGG | - | chr5.4:57270798-57270817 | MS.gene26152:intron | 40.0% | |
| TAGAGTTTGGCCAAGAGATA+CGG | - | chr5.4:57268187-57268206 | MS.gene26152:CDS | 40.0% | |
| TCATCAAGTGCTTCTTCATC+TGG | + | chr5.4:57269419-57269438 | None:intergenic | 40.0% | |
| TGGCCAAACTCTAGATTATG+AGG | + | chr5.4:57268180-57268199 | None:intergenic | 40.0% | |
| TTACGGTACCAAGGTAGTTT+AGG | + | chr5.4:57270714-57270733 | None:intergenic | 40.0% | |
| TTCCAAATGATGTGAGAGTG+AGG | + | chr5.4:57269051-57269070 | None:intergenic | 40.0% | |
| TTGCTCTGGTGTATCTCATT+TGG | - | chr5.4:57267995-57268014 | MS.gene26152:CDS | 40.0% | |
| ! | AAACTTTTGGCCATGCTAGA+TGG | - | chr5.4:57271132-57271151 | MS.gene26152:intron | 40.0% |
| ! | AAGGTGCTTGAAACTCTGAT+TGG | + | chr5.4:57270662-57270681 | None:intergenic | 40.0% |
| ! | ACCGTTTTATGCAAACAAGG+TGG | - | chr5.4:57267404-57267423 | MS.gene26152:CDS | 40.0% |
| ! | ACTGGATGGAAGTATATCCA+TGG | - | chr5.4:57269449-57269468 | MS.gene26152:CDS | 40.0% |
| ! | ATCTTCACCCGGACAATTTT+TGG | + | chr5.4:57268214-57268233 | None:intergenic | 40.0% |
| ! | ATCTTTTGGCAAATGCTCTC+AGG | + | chr5.4:57268684-57268703 | None:intergenic | 40.0% |
| ! | CACCTTTATTGGTATTGGGT+GGG | - | chr5.4:57270619-57270638 | MS.gene26152:intron | 40.0% |
| ! | CACGTGATGCTACAAACTTT+TGG | - | chr5.4:57271119-57271138 | MS.gene26152:intron | 40.0% |
| ! | CCCACCTTGTTTGCATAAAA+CGG | + | chr5.4:57267408-57267427 | None:intergenic | 40.0% |
| ! | CCGTTTTATGCAAACAAGGT+GGG | - | chr5.4:57267405-57267424 | MS.gene26152:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr5.4:57269699-57269718 | None:intergenic | 40.0% |
| ! | TACATGGCTTGCATTTGCTA+TGG | - | chr5.4:57271531-57271550 | MS.gene26152:CDS | 40.0% |
| ! | TCACCTTTATTGGTATTGGG+TGG | - | chr5.4:57270618-57270637 | MS.gene26152:intron | 40.0% |
| ! | TTATTTAGGTTCCTCGAACC+TGG | - | chr5.4:57270155-57270174 | MS.gene26152:CDS | 40.0% |
| !! | ACTACCCTTTGGAACAATTG+TGG | - | chr5.4:57270566-57270585 | MS.gene26152:intron | 40.0% |
| !! | AGTAAAAGGCAGGTATTGAG+TGG | + | chr5.4:57270133-57270152 | None:intergenic | 40.0% |
| !! | ATACTTTCAACTTGCTGCTG+AGG | - | chr5.4:57270908-57270927 | MS.gene26152:intron | 40.0% |
| !! | GAGCACATTTGATCGCTTTT+TGG | + | chr5.4:57269256-57269275 | None:intergenic | 40.0% |
| !! | TGTTCACCAGGTTAGTTTGA+TGG | - | chr5.4:57268466-57268485 | MS.gene26152:intron | 40.0% |
| !!! | AATTTTTGGCCCGTATCTCT+TGG | + | chr5.4:57268200-57268219 | None:intergenic | 40.0% |
| !!! | CAACACTCATTTTGAAACGG+AGG | - | chr5.4:57269836-57269855 | MS.gene26152:CDS | 40.0% |
| !!! | TGTCACTGCTTTTGGTAATG+TGG | - | chr5.4:57270878-57270897 | MS.gene26152:intron | 40.0% |
| AACAAAGCTCCCCTGTTGTA+TGG | + | chr5.4:57269979-57269998 | None:intergenic | 45.0% | |
| AAGTACGCGCATGAGAATCA+TGG | + | chr5.4:57269135-57269154 | None:intergenic | 45.0% | |
| AATCCAGCCATAGCCATTTG+AGG | + | chr5.4:57270744-57270763 | None:intergenic | 45.0% | |
| AATCTCCCTCGGATACTTGT+TGG | + | chr5.4:57270691-57270710 | None:intergenic | 45.0% | |
| ACTTCCATCCAGTCTCTTCT+TGG | + | chr5.4:57269442-57269461 | None:intergenic | 45.0% | |
| ACTTGAGGGAACGGTATATG+TGG | + | chr5.4:57271611-57271630 | None:intergenic | 45.0% | |
| AGAGTTTGGCCAAGAGATAC+GGG | - | chr5.4:57268188-57268207 | MS.gene26152:CDS | 45.0% | |
| ATACGGGCCAAAAATTGTCC+GGG | - | chr5.4:57268204-57268223 | MS.gene26152:CDS | 45.0% | |
| ATGACCAAGAAGAGACTGGA+TGG | - | chr5.4:57269435-57269454 | MS.gene26152:CDS | 45.0% | |
| CACATGTATCAGTGTTGTGC+TGG | + | chr5.4:57267872-57267891 | None:intergenic | 45.0% | |
| CCACTCAGTTTCTCTTTCCA+CGG | + | chr5.4:57270409-57270428 | None:intergenic | 45.0% | |
| CTCACACAAAAAGTGACACG+TGG | + | chr5.4:57267939-57267958 | None:intergenic | 45.0% | |
| CTTCCAAGGAAACCCCAAAT+TGG | + | chr5.4:57268786-57268805 | None:intergenic | 45.0% | |
| GAAGGAAGCTGCAGAATAAC+CGG | + | chr5.4:57270043-57270062 | None:intergenic | 45.0% | |
| GAATTAAGAGGACCGACCTT+TGG | + | chr5.4:57271184-57271203 | None:intergenic | 45.0% | |
| GAGAATCATGGCAAGGAATC+CGG | + | chr5.4:57269123-57269142 | None:intergenic | 45.0% | |
| GATACGGGCCAAAAATTGTC+CGG | - | chr5.4:57268203-57268222 | MS.gene26152:CDS | 45.0% | |
| GCGATCAAATGTGCTCAATG+TGG | - | chr5.4:57269260-57269279 | MS.gene26152:intron | 45.0% | |
| GGACTTGACAGAAGATAGAG+AGG | - | chr5.4:57268941-57268960 | MS.gene26152:CDS | 45.0% | |
| GGGAGATTCCTAAACTACCT+TGG | - | chr5.4:57270703-57270722 | MS.gene26152:intron | 45.0% | |
| GGTAGTTTAGGAATCTCCCT+CGG | + | chr5.4:57270702-57270721 | None:intergenic | 45.0% | |
| GTCAAGTCCACAACAGCATT+CGG | + | chr5.4:57268930-57268949 | None:intergenic | 45.0% | |
| TAGTGCTGCAGTGGAGTTAT+AGG | + | chr5.4:57270550-57270569 | None:intergenic | 45.0% | |
| TCGAACCAACAAGTATCCGA+GGG | - | chr5.4:57270683-57270702 | MS.gene26152:intron | 45.0% | |
| TGGTAGGAGCTGCAATGTAA+AGG | + | chr5.4:57269306-57269325 | None:intergenic | 45.0% | |
| TTGCTGCTGAGGATCATGAA+TGG | - | chr5.4:57270919-57270938 | MS.gene26152:intron | 45.0% | |
| TTGTTGTGAATCCAGGTTCG+AGG | + | chr5.4:57270169-57270188 | None:intergenic | 45.0% | |
| ! | CTTGATGACCAAGAAGAGAC+TGG | - | chr5.4:57269431-57269450 | MS.gene26152:CDS | 45.0% |
| ! | GATCTTCCCTTTTGTTCACC+AGG | - | chr5.4:57268454-57268473 | MS.gene26152:intron | 45.0% |
| ! | GGAAGAGTTTTACGGTACCA+AGG | + | chr5.4:57270723-57270742 | None:intergenic | 45.0% |
| ! | GGGCCTCATAATCTAGAGTT+TGG | - | chr5.4:57268174-57268193 | MS.gene26152:CDS | 45.0% |
| ! | TATCAGTGTTGTGCTGGTGT+CGG | + | chr5.4:57267866-57267885 | None:intergenic | 45.0% |
| ! | TTGCCAATTTGGGGTTTCCT+TGG | - | chr5.4:57268780-57268799 | MS.gene26152:intron | 45.0% |
| !! | GGATACTTGTTGGTTCGACA+AGG | + | chr5.4:57270681-57270700 | None:intergenic | 45.0% |
| !! | TCCTTTGTGGTGGATCAACT+GGG | - | chr5.4:57271424-57271443 | MS.gene26152:intron | 45.0% |
| !! | TGTAGCACTGACACTTCTGA+TGG | - | chr5.4:57267820-57267839 | MS.gene26152:intron | 45.0% |
| !! | TTCCTTTGTGGTGGATCAAC+TGG | - | chr5.4:57271423-57271442 | MS.gene26152:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr5.4:57269595-57269614 | None:intergenic | 45.0% |
| AATCTGATGACCCCACACAC+TGG | + | chr5.4:57270811-57270830 | None:intergenic | 50.0% | |
| ACCCAGTTGATCCACCACAA+AGG | + | chr5.4:57271428-57271447 | None:intergenic | 50.0% | |
| CCATTCCTCCGGAAATTGGA+GGG | + | chr5.4:57268156-57268175 | None:intergenic | 50.0% | |
| CCGTGGAAAGAGAAACTGAG+TGG | - | chr5.4:57270406-57270425 | MS.gene26152:intron | 50.0% | |
| CCTCCAATTTCCGGAGGAAT+GGG | - | chr5.4:57268154-57268173 | MS.gene26152:CDS | 50.0% | |
| CCTGAGGTCAAATCTTCACC+CGG | + | chr5.4:57268225-57268244 | None:intergenic | 50.0% | |
| CTGAGGATCATGAATGGTGG+TGG | - | chr5.4:57270925-57270944 | MS.gene26152:intron | 50.0% | |
| CTGCTGAGGATCATGAATGG+TGG | - | chr5.4:57270922-57270941 | MS.gene26152:intron | 50.0% | |
| CTTCCTCAAATGGCTATGGC+TGG | - | chr5.4:57270738-57270757 | MS.gene26152:intron | 50.0% | |
| GAATTGTTCGGGAGAACCTG+AGG | + | chr5.4:57268241-57268260 | None:intergenic | 50.0% | |
| GATTATGAGGCCCATTCCTC+CGG | + | chr5.4:57268167-57268186 | None:intergenic | 50.0% | |
| GGATCGAGATCCATCTAGCA+TGG | + | chr5.4:57271145-57271164 | None:intergenic | 50.0% | |
| GTCGAACCAACAAGTATCCG+AGG | - | chr5.4:57270682-57270701 | MS.gene26152:intron | 50.0% | |
| TGCAGAATAACCGGCAATGC+CGG | + | chr5.4:57270034-57270053 | None:intergenic | 50.0% | |
| TGGGACCCTTTCATAATCCC+AGG | - | chr5.4:57267424-57267443 | MS.gene26152:CDS | 50.0% | |
| ! | CTGGTGTCGGACATTAGACT+CGG | + | chr5.4:57267853-57267872 | None:intergenic | 50.0% |
| ! | GGCCGACCTCTAAAAAGTAG+AGG | - | chr5.4:57271236-57271255 | MS.gene26152:intron | 50.0% |
| ! | TTGGTATTGGGTGGGATTGC+TGG | - | chr5.4:57270627-57270646 | MS.gene26152:intron | 50.0% |
| !! | AGGATCATGAATGGTGGTGG+AGG | - | chr5.4:57270928-57270947 | MS.gene26152:intron | 50.0% |
| !! | GGGAGCTTTGTTTACTGCAC+TGG | - | chr5.4:57269987-57270006 | MS.gene26152:CDS | 50.0% |
| AGGCCCATTCCTCCGGAAAT+TGG | + | chr5.4:57268160-57268179 | None:intergenic | 55.0% | |
| CCCATTCCTCCGGAAATTGG+AGG | + | chr5.4:57268157-57268176 | None:intergenic | 55.0% | |
| CCCTCCAATTTCCGGAGGAA+TGG | - | chr5.4:57268153-57268172 | MS.gene26152:CDS | 55.0% | |
| CCGGGTGAAGATTTGACCTC+AGG | - | chr5.4:57268222-57268241 | MS.gene26152:CDS | 55.0% | |
| CGCGCATGAGAATCATGGCA+AGG | + | chr5.4:57269130-57269149 | None:intergenic | 55.0% | |
| CTCCGGAAATTGGAGGGTTC+AGG | + | chr5.4:57268150-57268169 | None:intergenic | 55.0% | |
| CTGAACCCTCCAATTTCCGG+AGG | - | chr5.4:57268148-57268167 | MS.gene26152:CDS | 55.0% | |
| GCATTAACGTCCGGCATTGC+CGG | - | chr5.4:57270021-57270040 | MS.gene26152:CDS | 55.0% | |
| GGCCTGAACCCTCCAATTTC+CGG | - | chr5.4:57268145-57268164 | MS.gene26152:CDS | 55.0% | |
| TCCAAAGGGTAGTGCTGCAG+TGG | + | chr5.4:57270559-57270578 | None:intergenic | 55.0% | |
| TCCACTGCAGCACTACCCTT+TGG | - | chr5.4:57270555-57270574 | MS.gene26152:intron | 55.0% | |
| TCTTCCGCATCTGCAGCCAA+AGG | - | chr5.4:57271165-57271184 | MS.gene26152:intron | 55.0% | |
| TCTTTGTTCGCCGCAGCACT+TGG | - | chr5.4:57269500-57269519 | MS.gene26152:intron | 55.0% | |
| TTTGGCTGCAGATGCGGAAG+AGG | + | chr5.4:57271166-57271185 | None:intergenic | 55.0% | |
| ! | AGTGCCTGTTCCAAGTGCTG+CGG | + | chr5.4:57269513-57269532 | None:intergenic | 55.0% |
| CCGACCTTTGGCTGCAGATG+CGG | + | chr5.4:57271172-57271191 | None:intergenic | 60.0% | |
| CCGCATCTGCAGCCAAAGGT+CGG | - | chr5.4:57271169-57271188 | MS.gene26152:intron | 60.0% | |
| TTCGCCGCAGCACTTGGAAC+AGG | - | chr5.4:57269506-57269525 | MS.gene26152:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 57267288 | 57271638 | 57267288 | ID=MS.gene26152 |
| chr5.4 | mRNA | 57267288 | 57271638 | 57267288 | ID=MS.gene26152.t1;Parent=MS.gene26152 |
| chr5.4 | exon | 57271481 | 57271638 | 57271481 | ID=MS.gene26152.t1.exon1;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57271481 | 57271638 | 57271481 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57270451 | 57270491 | 57270451 | ID=MS.gene26152.t1.exon2;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57270451 | 57270491 | 57270451 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57269755 | 57270343 | 57269755 | ID=MS.gene26152.t1.exon3;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57269755 | 57270343 | 57269755 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57269380 | 57269517 | 57269380 | ID=MS.gene26152.t1.exon4;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57269380 | 57269517 | 57269380 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57268837 | 57268993 | 57268837 | ID=MS.gene26152.t1.exon5;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57268837 | 57268993 | 57268837 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57267977 | 57268461 | 57267977 | ID=MS.gene26152.t1.exon6;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57267977 | 57268461 | 57267977 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| chr5.4 | exon | 57267288 | 57267507 | 57267288 | ID=MS.gene26152.t1.exon7;Parent=MS.gene26152.t1 |
| chr5.4 | CDS | 57267288 | 57267507 | 57267288 | ID=cds.MS.gene26152.t1;Parent=MS.gene26152.t1 |
| Gene Sequence |
| Protein sequence |
