Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28387.t1 | RHN43114.1 | 95.4 | 502 | 23 | 0 | 1 | 502 | 1 | 502 | 1.30E-262 | 915.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28387.t1 | Q1IFU9 | 39.7 | 156 | 93 | 1 | 343 | 498 | 10 | 164 | 2.6e-25 | 118.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28387.t1 | A0A396GUF7 | 95.4 | 502 | 23 | 0 | 1 | 502 | 1 | 502 | 9.4e-263 | 915.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene28387 | 0.87181 | 5.15E-67 | -1.69E-46 |
| MS.gene049341 | MS.gene28387 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene049441 | MS.gene28387 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene28387 | 0.816407 | 5.62E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene28387 | 0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene28387 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene28387 | 0.822959 | 1.79E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene28387 | 0.825716 | 4.03E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene28387 | 0.821172 | 4.65E-53 | -1.69E-46 |
| MS.gene049873 | MS.gene28387 | 0.808798 | 2.59E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene28387 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene28387 | 0.800549 | 1.37E-48 | -1.69E-46 |
| MS.gene050194 | MS.gene28387 | 0.827198 | 1.79E-54 | -1.69E-46 |
| MS.gene050630 | MS.gene28387 | 0.821067 | 4.92E-53 | -1.69E-46 |
| MS.gene050689 | MS.gene28387 | 0.804611 | 1.99E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene28387 | 0.810834 | 9.46E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene28387 | 0.810894 | 9.19E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene28387 | 0.801409 | 9.13E-49 | -1.69E-46 |
| MS.gene051021 | MS.gene28387 | 0.805237 | 1.47E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene28387 | 0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene28387 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene28387 | 0.827401 | 1.60E-54 | -1.69E-46 |
| MS.gene051388 | MS.gene28387 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene28387 | 0.826711 | 2.33E-54 | -1.69E-46 |
| MS.gene051700 | MS.gene28387 | 0.811237 | 7.74E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene28387 | 0.829184 | 5.93E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene28387 | 0.827416 | 1.58E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene28387 | 0.834731 | 2.53E-56 | -1.69E-46 |
| MS.gene051850 | MS.gene28387 | 0.801943 | 7.09E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene28387 | 0.819499 | 1.12E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene28387 | 0.846103 | 2.68E-59 | -1.69E-46 |
| MS.gene052516 | MS.gene28387 | 0.837544 | 4.88E-57 | -1.69E-46 |
| MS.gene052561 | MS.gene28387 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene28387 | 0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene28387 | 0.805492 | 1.30E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene28387 | 0.831097 | 2.02E-55 | -1.69E-46 |
| MS.gene052731 | MS.gene28387 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene052732 | MS.gene28387 | 0.840702 | 7.42E-58 | -1.69E-46 |
| MS.gene052896 | MS.gene28387 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene28387 | 0.835717 | 1.43E-56 | -1.69E-46 |
| MS.gene053144 | MS.gene28387 | 0.878892 | 1.94E-69 | -1.69E-46 |
| MS.gene053174 | MS.gene28387 | 0.818512 | 1.89E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene28387 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene28387 | 0.824684 | 7.06E-54 | -1.69E-46 |
| MS.gene053599 | MS.gene28387 | 0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene28387 | 0.843699 | 1.19E-58 | -1.69E-46 |
| MS.gene054550 | MS.gene28387 | 0.823577 | 1.29E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene28387 | 0.87929 | 1.41E-69 | -1.69E-46 |
| MS.gene054651 | MS.gene28387 | 0.805467 | 1.32E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene28387 | 0.870585 | 1.31E-66 | -1.69E-46 |
| MS.gene055466 | MS.gene28387 | 0.878281 | 3.19E-69 | -1.69E-46 |
| MS.gene055468 | MS.gene28387 | 0.868485 | 6.31E-66 | -1.69E-46 |
| MS.gene055469 | MS.gene28387 | 0.819418 | 1.17E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene28387 | 0.829458 | 5.09E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene28387 | 0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene28387 | -0.902417 | 9.91E-79 | -1.69E-46 |
| MS.gene055778 | MS.gene28387 | 0.846507 | 2.08E-59 | -1.69E-46 |
| MS.gene055808 | MS.gene28387 | 0.818543 | 1.86E-52 | -1.69E-46 |
| MS.gene055890 | MS.gene28387 | 0.838458 | 2.84E-57 | -1.69E-46 |
| MS.gene055891 | MS.gene28387 | 0.845262 | 4.53E-59 | -1.69E-46 |
| MS.gene056043 | MS.gene28387 | -0.885749 | 6.21E-72 | -1.69E-46 |
| MS.gene056091 | MS.gene28387 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene28387 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene28387 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene28387 | 0.809101 | 2.24E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene28387 | 0.8063 | 8.79E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene28387 | 0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene28387 | 0.805931 | 1.05E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene28387 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene058636 | MS.gene28387 | 0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene28387 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene28387 | 0.805969 | 1.03E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene28387 | 0.819293 | 1.25E-52 | -1.69E-46 |
| MS.gene059154 | MS.gene28387 | 0.810613 | 1.06E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene28387 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene28387 | 0.825427 | 4.72E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene28387 | 0.809564 | 1.78E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene28387 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene28387 | 0.843064 | 1.76E-58 | -1.69E-46 |
| MS.gene060429 | MS.gene28387 | 0.839034 | 2.02E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene28387 | 0.874202 | 8.12E-68 | -1.69E-46 |
| MS.gene060603 | MS.gene28387 | 0.808667 | 2.77E-50 | -1.69E-46 |
| MS.gene060884 | MS.gene28387 | 0.813335 | 2.70E-51 | -1.69E-46 |
| MS.gene060886 | MS.gene28387 | 0.816585 | 5.13E-52 | -1.69E-46 |
| MS.gene060917 | MS.gene28387 | 0.808548 | 2.93E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28387.t1 | MTR_8g093680 | 97.211 | 502 | 14 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1010 |
| MS.gene28387.t1 | MTR_8g093680 | 94.853 | 408 | 21 | 0 | 1 | 408 | 1 | 408 | 0.0 | 721 |
| MS.gene28387.t1 | MTR_4g088615 | 32.026 | 153 | 104 | 0 | 341 | 493 | 143 | 295 | 4.27e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28387.t1 | AT1G64880 | 60.878 | 501 | 176 | 7 | 12 | 502 | 25 | 515 | 0.0 | 567 |
| MS.gene28387.t1 | AT2G33800 | 32.075 | 159 | 108 | 0 | 335 | 493 | 137 | 295 | 2.29e-18 | 86.3 |
Find 117 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAGCATCTGGAGCTTT+AGG | 0.197064 | 4.4:+9246148 | None:intergenic |
| GAGAGAAGAATGAGAGATTA+AGG | 0.199671 | 4.4:-9249108 | MS.gene28387:CDS |
| TTCTGCAGCATAAGCTTAAT+AGG | 0.213549 | 4.4:-9248694 | MS.gene28387:CDS |
| CGGACTGAGTATAGGGTTAT+TGG | 0.254625 | 4.4:-9248767 | MS.gene28387:CDS |
| CCGTAATTGGCAGGGTTATC+AGG | 0.268269 | 4.4:+9248635 | None:intergenic |
| AAGAAGTTCCATCACTATTC+TGG | 0.272614 | 4.4:+9249156 | None:intergenic |
| TGAGAGCATCTGGAGCTTTA+GGG | 0.292106 | 4.4:+9246149 | None:intergenic |
| ATCTGGAGCTTTAGGGCCTT+TGG | 0.294046 | 4.4:+9246156 | None:intergenic |
| CGCTTGATGATGCTTATAAA+TGG | 0.314912 | 4.4:-9248832 | MS.gene28387:CDS |
| AACTTCTCTTGGACATCCTT+TGG | 0.327728 | 4.4:+9244601 | None:intergenic |
| AAAACCAGCTAAATGTAGTA+TGG | 0.331398 | 4.4:+9244887 | None:intergenic |
| TTGTTCCAAGGTATCCATAT+TGG | 0.331911 | 4.4:+9248586 | None:intergenic |
| CTTGTCAATAACATCAAGTT+TGG | 0.343906 | 4.4:+9248454 | None:intergenic |
| GCTGAACTTGAGTATACATT+TGG | 0.357489 | 4.4:-9248413 | MS.gene28387:CDS |
| TCTGCAGCATAAGCTTAATA+GGG | 0.363272 | 4.4:-9248693 | MS.gene28387:CDS |
| TGGCCTGCTTCCACTGCAAC+TGG | 0.368005 | 4.4:-9244936 | MS.gene28387:CDS |
| TGTTCCAAGGTATCCATATT+GGG | 0.371200 | 4.4:+9248587 | None:intergenic |
| AGCTCCAGATGCTCTCAATA+AGG | 0.374070 | 4.4:-9246143 | MS.gene28387:intron |
| TAAGCTTCGGACTGAGTATA+GGG | 0.382822 | 4.4:-9248774 | MS.gene28387:CDS |
| CGGTCTCATTCAACAAGAAC+AGG | 0.383691 | 4.4:-9248615 | MS.gene28387:CDS |
| AATAGTGATGGAACTTCTTA+AGG | 0.389577 | 4.4:-9249152 | MS.gene28387:CDS |
| ATGATTTCGAAAGGAAGTTC+AGG | 0.391603 | 4.4:-9248895 | MS.gene28387:CDS |
| TTAAGCTTCGGACTGAGTAT+AGG | 0.395446 | 4.4:-9248775 | MS.gene28387:CDS |
| ACTCCATAAGATCACCTTTA+GGG | 0.400033 | 4.4:-9249249 | MS.gene28387:CDS |
| CAGCTAAATGTAGTATGGTT+TGG | 0.403294 | 4.4:+9244892 | None:intergenic |
| GCTTAATAGGGCTTTGAGAT+TGG | 0.406578 | 4.4:-9248681 | MS.gene28387:CDS |
| CCTGATAACCCTGCCAATTA+CGG | 0.407731 | 4.4:-9248635 | MS.gene28387:CDS |
| TTGTTGAATGAGACCGTAAT+TGG | 0.411415 | 4.4:+9248622 | None:intergenic |
| CAGTGATGATGAGGAAGATC+TGG | 0.420747 | 4.4:-9248939 | MS.gene28387:CDS |
| AGAGAAGAATGAGAGATTAA+GGG | 0.425455 | 4.4:-9249107 | MS.gene28387:CDS |
| ATGCCCTAAAGGTGATCTTA+TGG | 0.426740 | 4.4:+9249246 | None:intergenic |
| GGTACCTTATTGAGAGCATC+TGG | 0.431173 | 4.4:+9246139 | None:intergenic |
| CGAGGATGGTTATGATTACA+TGG | 0.431612 | 4.4:-9249050 | MS.gene28387:CDS |
| ATCATCAAGCGTATCCGCTT+CGG | 0.433026 | 4.4:+9248844 | None:intergenic |
| ATGGATACCTTGGAACAATC+TGG | 0.434043 | 4.4:-9248581 | MS.gene28387:CDS |
| CAGTTCGGCCAAACTTCTCT+TGG | 0.436228 | 4.4:+9244590 | None:intergenic |
| AAGGATGTCCAAGAGAAGTT+TGG | 0.439397 | 4.4:-9244598 | MS.gene28387:CDS |
| GGAACAATCTGGATTTGAAA+AGG | 0.439501 | 4.4:-9248570 | MS.gene28387:CDS |
| AACTCCATAAGATCACCTTT+AGG | 0.440096 | 4.4:-9249250 | MS.gene28387:CDS |
| CCTTTGTGACTTTACAAGTT+CGG | 0.442059 | 4.4:+9246335 | None:intergenic |
| GCATCTTCATCTCCTTGAGC+AGG | 0.449364 | 4.4:+9248539 | None:intergenic |
| GAGACTCTTGCCATGAAAAC+GGG | 0.453113 | 4.4:+9249198 | None:intergenic |
| TAAAGTGGTTACTGAGCAAA+AGG | 0.454004 | 4.4:-9248726 | MS.gene28387:CDS |
| TTAGCATGTGGCAACTATAA+TGG | 0.455598 | 4.4:-9246199 | MS.gene28387:CDS |
| TGAATGGGTTATATTCAGTA+TGG | 0.456241 | 4.4:-9249328 | MS.gene28387:CDS |
| GCTTGAAAAGGAGAAGCTTA+AGG | 0.457065 | 4.4:-9249005 | MS.gene28387:CDS |
| AGAGACTCTTGCCATGAAAA+CGG | 0.460723 | 4.4:+9249197 | None:intergenic |
| GGCAACTATAATGGTGTTGT+TGG | 0.461710 | 4.4:-9246190 | MS.gene28387:CDS |
| ATCATAACCATCCTCGGTCT+CGG | 0.463201 | 4.4:+9249057 | None:intergenic |
| ACAGCCTTAACTGTATTATG+AGG | 0.478809 | 4.4:+9244743 | None:intergenic |
| AAATCCTCATAATACAGTTA+AGG | 0.482904 | 4.4:-9244747 | MS.gene28387:CDS |
| TAATTCAATAGGTGTATCTC+TGG | 0.483090 | 4.4:-9244956 | MS.gene28387:intron |
| TGAATGAGACCGTAATTGGC+AGG | 0.484698 | 4.4:+9248626 | None:intergenic |
| TTAAGGAGGTGGAGAAGGAT+AGG | 0.486790 | 4.4:-9249135 | MS.gene28387:CDS |
| ACTGCAACTGGCATGAAGGC+CGG | 0.491223 | 4.4:-9244924 | MS.gene28387:CDS |
| ATGCCAGTTGCAGTGGAAGC+AGG | 0.491431 | 4.4:+9244933 | None:intergenic |
| TCTTATCGAGAAGCTTGAAA+AGG | 0.493738 | 4.4:-9249017 | MS.gene28387:CDS |
| CAAACCATACTACATTTAGC+TGG | 0.497943 | 4.4:-9244891 | MS.gene28387:CDS |
| AAGAATGAGAGATTAAGGGC+TGG | 0.507014 | 4.4:-9249103 | MS.gene28387:CDS |
| CAAGTGCAACCAATGTGTTT+CGG | 0.514283 | 4.4:-9249273 | MS.gene28387:CDS |
| TGAGTATACATTTGGAAGGA+AGG | 0.514885 | 4.4:-9248405 | MS.gene28387:CDS |
| GGCCTTCATGCCAGTTGCAG+TGG | 0.518184 | 4.4:+9244926 | None:intergenic |
| AATACTTCTCGACCACAGTT+CGG | 0.537088 | 4.4:+9244575 | None:intergenic |
| CTCGGTCTCGGCATCAATGT+CGG | 0.538282 | 4.4:+9249069 | None:intergenic |
| TATGGTTTGGACTATTCTGC+CGG | 0.538461 | 4.4:+9244905 | None:intergenic |
| TTTGAGATTGGTGCAGTGGA+AGG | 0.538637 | 4.4:-9248669 | MS.gene28387:CDS |
| GATGGAACTTCTTAAGGAGG+TGG | 0.540444 | 4.4:-9249146 | MS.gene28387:CDS |
| ACTTCTTAAGGAGGTGGAGA+AGG | 0.540719 | 4.4:-9249140 | MS.gene28387:CDS |
| GGGGCCCAATATGGATACCT+TGG | 0.542164 | 4.4:-9248591 | MS.gene28387:CDS |
| GGAACATGAAGGTAATGTAA+TGG | 0.547066 | 4.4:+9249219 | None:intergenic |
| TTCTGATGCCAGAATAGTGA+TGG | 0.552389 | 4.4:-9249164 | MS.gene28387:CDS |
| ACTCATGAATCGTCTTAAAG+TGG | 0.555879 | 4.4:-9248741 | MS.gene28387:CDS |
| TATTCTGGCATCAGAAGTAG+TGG | 0.562707 | 4.4:+9249171 | None:intergenic |
| CATGTAATCATAACCATCCT+CGG | 0.563559 | 4.4:+9249051 | None:intergenic |
| GGGCTTTGAGATTGGTGCAG+TGG | 0.565478 | 4.4:-9248673 | MS.gene28387:CDS |
| TTCCACTGCAACTGGCATGA+AGG | 0.566604 | 4.4:-9244928 | MS.gene28387:CDS |
| TCGAGAAGTATTTGTTGTGA+TGG | 0.567736 | 4.4:-9244564 | None:intergenic |
| TCTGGATGCTAATCAGAAGA+AGG | 0.568563 | 4.4:-9248921 | MS.gene28387:CDS |
| TACATTTGGAAGGAAGGGTA+AGG | 0.569640 | 4.4:-9248399 | MS.gene28387:CDS |
| GAAACTACCTTTCGGAAAAG+TGG | 0.574004 | 4.4:+9248311 | None:intergenic |
| CCATGAAAACGGGAACATGA+AGG | 0.574072 | 4.4:+9249208 | None:intergenic |
| GGAGAAGCTTAAGGAGACCT+CGG | 0.574929 | 4.4:-9248996 | MS.gene28387:CDS |
| ATTGATGCCGAGACCGAGGA+TGG | 0.579776 | 4.4:-9249064 | MS.gene28387:CDS |
| GTAATGGCTGCATGCCCTAA+AGG | 0.583029 | 4.4:+9249235 | None:intergenic |
| AAGGAAGGGTAAGGCTCTAG+AGG | 0.583467 | 4.4:-9248390 | MS.gene28387:CDS |
| AGAAGGTTGATGATTTCGAA+AGG | 0.585774 | 4.4:-9248904 | MS.gene28387:CDS |
| TTCAAATCCAGATTGTTCCA+AGG | 0.587564 | 4.4:+9248574 | None:intergenic |
| GAGTATACATTTGGAAGGAA+GGG | 0.590258 | 4.4:-9248404 | MS.gene28387:CDS |
| TATGGAGTTCCGAAACACAT+TGG | 0.593450 | 4.4:+9249264 | None:intergenic |
| AACTTGAGTATACATTTGGA+AGG | 0.597121 | 4.4:-9248409 | MS.gene28387:CDS |
| GTTCCAGATTGAAACGCCAA+AGG | 0.599069 | 4.4:-9244617 | MS.gene28387:intron |
| TCATCACTGTCAGAATCAGT+CGG | 0.599404 | 4.4:+9248953 | None:intergenic |
| TGTTATTGACAAGAGACTTG+AGG | 0.599515 | 4.4:-9248444 | MS.gene28387:CDS |
| GAATGAGACCGTAATTGGCA+GGG | 0.605751 | 4.4:+9248627 | None:intergenic |
| GATTCAGAATTTCACCGAAG+CGG | 0.607335 | 4.4:-9248858 | MS.gene28387:CDS |
| AAGGAGGATAAACCTGCTCA+AGG | 0.610936 | 4.4:-9248551 | MS.gene28387:CDS |
| TGGTTACTGAGCAAAAGGAT+AGG | 0.618062 | 4.4:-9248721 | MS.gene28387:CDS |
| TATATTCAGTATGGTAGACA+CGG | 0.630793 | 4.4:-9249319 | MS.gene28387:CDS |
| ACAATCTGGATTTGAAAAGG+AGG | 0.632065 | 4.4:-9248567 | MS.gene28387:CDS |
| CGACATTGATGCCGAGACCG+AGG | 0.635504 | 4.4:-9249068 | MS.gene28387:CDS |
| TCTCATTCAACAAGAACAGG+GGG | 0.638807 | 4.4:-9248612 | MS.gene28387:CDS |
| AGTGATGGAACTTCTTAAGG+AGG | 0.643210 | 4.4:-9249149 | MS.gene28387:CDS |
| AGAGAAGTTTGGCCGAACTG+TGG | 0.645250 | 4.4:-9244587 | MS.gene28387:CDS |
| ATTTCGAAAGGAAGTTCAGG+AGG | 0.648062 | 4.4:-9248892 | MS.gene28387:CDS |
| TCATTCAACAAGAACAGGGG+GGG | 0.652604 | 4.4:-9248610 | MS.gene28387:CDS |
| TGCTGCTGACAACGACGATG+AGG | 0.653652 | 4.4:-9248519 | MS.gene28387:CDS |
| AGAGATCAAAGATCTTGCAG+AGG | 0.657591 | 4.4:-9248366 | MS.gene28387:CDS |
| CCGAACTTGTAAAGTCACAA+AGG | 0.657693 | 4.4:-9246335 | MS.gene28387:intron |
| TATACTGCTATGTTAGCATG+TGG | 0.662521 | 4.4:-9246211 | MS.gene28387:CDS |
| TGATTCTGACAGTGATGATG+AGG | 0.665645 | 4.4:-9248948 | MS.gene28387:CDS |
| GCATTATGTAGAGCGACACG+AGG | 0.669562 | 4.4:-9245215 | MS.gene28387:CDS |
| GGTCTCATTCAACAAGAACA+GGG | 0.675351 | 4.4:-9248614 | MS.gene28387:CDS |
| TTCGTATCGATTCAACTCCG+AGG | 0.679730 | 4.4:+9248979 | None:intergenic |
| TGTCTTCAAAGCGCTTAATG+CGG | 0.682894 | 4.4:-9244723 | MS.gene28387:intron |
| GTCTCATTCAACAAGAACAG+GGG | 0.712019 | 4.4:-9248613 | MS.gene28387:CDS |
| GAGGATGGTTATGATTACAT+GGG | 0.717963 | 4.4:-9249049 | MS.gene28387:CDS |
| CTCATTCAACAAGAACAGGG+GGG | 0.735016 | 4.4:-9248611 | MS.gene28387:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATCATATTGAAATAA+TGG | - | chr4.4:9248609-9248628 | MS.gene28387:CDS | 10.0% |
| !!! | GATTCATATATTTTTAATAT+GGG | - | chr4.4:9245941-9245960 | MS.gene28387:intron | 10.0% |
| !!! | TGATTCATATATTTTTAATA+TGG | - | chr4.4:9245940-9245959 | MS.gene28387:intron | 10.0% |
| !! | AATAATAAAAAGATGAAAAG+TGG | + | chr4.4:9248289-9248308 | None:intergenic | 15.0% |
| !! | GTAAAAATTTATTGAAATAC+TGG | + | chr4.4:9249225-9249244 | None:intergenic | 15.0% |
| !!! | CTCAATTTTGAAATAATTAA+GGG | - | chr4.4:9246827-9246846 | MS.gene28387:intron | 15.0% |
| !!! | TGTCTTTTAATAAAATCTTA+GGG | + | chr4.4:9245984-9246003 | None:intergenic | 15.0% |
| !!! | TTCATTTTAAATGAATTGAA+GGG | - | chr4.4:9245771-9245790 | MS.gene28387:intron | 15.0% |
| !!! | TTTTTTTTTTTTGTCTTCAT+AGG | - | chr4.4:9249109-9249128 | MS.gene28387:CDS | 15.0% |
| !! | AAAAACATAAAAATGGTAAG+TGG | + | chr4.4:9247462-9247481 | None:intergenic | 20.0% |
| !! | AAAACATAAAAATGGTAAGT+GGG | + | chr4.4:9247461-9247480 | None:intergenic | 20.0% |
| !! | AAATCCATTAATTAAGATGA+AGG | - | chr4.4:9246722-9246741 | MS.gene28387:intron | 20.0% |
| !! | AAGAAACTCTATGATATAAA+CGG | + | chr4.4:9248787-9248806 | None:intergenic | 20.0% |
| !! | ACATTCTATGAAATTTAACT+CGG | + | chr4.4:9246571-9246590 | None:intergenic | 20.0% |
| !! | AGAAAAAGACAACATATTAT+TGG | - | chr4.4:9245415-9245434 | MS.gene28387:intron | 20.0% |
| !! | AGGTATAAAATGTTAGTTAA+CGG | + | chr4.4:9246057-9246076 | None:intergenic | 20.0% |
| !! | ATAAAGCAAAAACAAGAATA+TGG | + | chr4.4:9247432-9247451 | None:intergenic | 20.0% |
| !! | ATTATAAGTGAAAAAAAGGA+AGG | - | chr4.4:9247142-9247161 | MS.gene28387:intron | 20.0% |
| !! | CCTTAATTATTTCAAAATTG+AGG | + | chr4.4:9246829-9246848 | None:intergenic | 20.0% |
| !! | TAAAGCAAAAACAAGAATAT+GGG | + | chr4.4:9247431-9247450 | None:intergenic | 20.0% |
| !! | TGGTTTATTTGAATATAATC+AGG | - | chr4.4:9248629-9248648 | MS.gene28387:CDS | 20.0% |
| !! | TTATAAGTGAAAAAAAGGAA+GGG | - | chr4.4:9247143-9247162 | MS.gene28387:intron | 20.0% |
| !! | TTGATTAAAAAAAACAGCTT+CGG | - | chr4.4:9246458-9246477 | MS.gene28387:intron | 20.0% |
| !!! | AAAAAGAAGAAATTTTCCAA+AGG | + | chr4.4:9247304-9247323 | None:intergenic | 20.0% |
| !!! | AAGCTGTTTTTTTTAATCAA+TGG | + | chr4.4:9246458-9246477 | None:intergenic | 20.0% |
| !!! | AATTTTGAAATAATTAAGGG+AGG | - | chr4.4:9246830-9246849 | MS.gene28387:intron | 20.0% |
| !!! | ATACACCAAATTTAAAACAT+TGG | + | chr4.4:9248461-9248480 | None:intergenic | 20.0% |
| !!! | ATGTTTCTACAATGTATAAA+AGG | + | chr4.4:9246386-9246405 | None:intergenic | 20.0% |
| !!! | CCTCAATTTTGAAATAATTA+AGG | - | chr4.4:9246826-9246845 | MS.gene28387:intron | 20.0% |
| !!! | CCTTTTTTTCACTTATAATT+GGG | + | chr4.4:9247141-9247160 | None:intergenic | 20.0% |
| !!! | GTCTTTTAATAAAATCTTAG+GGG | + | chr4.4:9245983-9246002 | None:intergenic | 20.0% |
| !!! | GTGTCTTTTAATAAAATCTT+AGG | + | chr4.4:9245985-9246004 | None:intergenic | 20.0% |
| !!! | GTTCATTTTAAATGAATTGA+AGG | - | chr4.4:9245770-9245789 | MS.gene28387:intron | 20.0% |
| !!! | TCCTTTTTTTCACTTATAAT+TGG | + | chr4.4:9247142-9247161 | None:intergenic | 20.0% |
| !!! | TTTATATCAAGTTTCAAGTA+AGG | - | chr4.4:9245659-9245678 | MS.gene28387:intron | 20.0% |
| !!! | TTTGACCAATGTTTTAAATT+TGG | - | chr4.4:9248453-9248472 | MS.gene28387:CDS | 20.0% |
| !!! | TTTGCTGAAACTTTATATTT+TGG | + | chr4.4:9248514-9248533 | None:intergenic | 20.0% |
| !!! | TTTTGGTTAAATAATCGTTT+TGG | - | chr4.4:9247486-9247505 | MS.gene28387:intron | 20.0% |
| !!! | TTTTTCTCAATCAAACAAAA+AGG | + | chr4.4:9246213-9246232 | None:intergenic | 20.0% |
| ! | AAAACAAATAGATTTCACTC+AGG | - | chr4.4:9246507-9246526 | MS.gene28387:intron | 25.0% |
| ! | AAATAGATCCATATCTCTTA+TGG | + | chr4.4:9247893-9247912 | None:intergenic | 25.0% |
| ! | AAATCCTCATAATACAGTTA+AGG | - | chr4.4:9249145-9249164 | MS.gene28387:CDS | 25.0% |
| ! | AACAAACTTAATACTTCCTT+TGG | - | chr4.4:9247175-9247194 | MS.gene28387:intron | 25.0% |
| ! | AACATCTTATAAAAAGACCA+AGG | - | chr4.4:9248725-9248744 | MS.gene28387:CDS | 25.0% |
| ! | AAGACTTAATAAGATATTGC+TGG | + | chr4.4:9247777-9247796 | None:intergenic | 25.0% |
| ! | AATATAAAACCCTCTTCATT+TGG | + | chr4.4:9247023-9247042 | None:intergenic | 25.0% |
| ! | AATATCAGCTAAAATGTCAT+AGG | + | chr4.4:9249247-9249266 | None:intergenic | 25.0% |
| ! | AGAAACTCTATGATATAAAC+GGG | + | chr4.4:9248786-9248805 | None:intergenic | 25.0% |
| ! | ATATAAAACCCTCTTCATTT+GGG | + | chr4.4:9247022-9247041 | None:intergenic | 25.0% |
| ! | ATGTGATGATAGATTGATAT+AGG | - | chr4.4:9248014-9248033 | MS.gene28387:intron | 25.0% |
| ! | ATTGCATAATAGAAAACATC+TGG | - | chr4.4:9248121-9248140 | MS.gene28387:intron | 25.0% |
| ! | CAATTTATAATAATCAGCCA+AGG | + | chr4.4:9248252-9248271 | None:intergenic | 25.0% |
| ! | CCCAATTATAAGTGAAAAAA+AGG | - | chr4.4:9247138-9247157 | MS.gene28387:intron | 25.0% |
| ! | GATGAAGAAATAGTGAAAAT+TGG | - | chr4.4:9246646-9246665 | MS.gene28387:intron | 25.0% |
| ! | GCAAAAAATTGATAAGTTTG+AGG | - | chr4.4:9245085-9245104 | MS.gene28387:intron | 25.0% |
| ! | TAATCAATGGAACTTTAGAT+TGG | + | chr4.4:9246445-9246464 | None:intergenic | 25.0% |
| ! | TCAAAATCAGATTTCATACT+TGG | + | chr4.4:9248438-9248457 | None:intergenic | 25.0% |
| ! | TCAATCTATCATCACATAAT+TGG | + | chr4.4:9248011-9248030 | None:intergenic | 25.0% |
| ! | TCAGAAAAACATGAATCAAT+AGG | + | chr4.4:9247950-9247969 | None:intergenic | 25.0% |
| ! | TGATAGATTGATATAGGATA+TGG | - | chr4.4:9248020-9248039 | MS.gene28387:intron | 25.0% |
| ! | TGTCATCTGTATAATTCAAT+AGG | - | chr4.4:9248925-9248944 | MS.gene28387:CDS | 25.0% |
| ! | TTAGCAGAAAAAGCAAATTA+GGG | + | chr4.4:9246111-9246130 | None:intergenic | 25.0% |
| ! | TTGATGTTAGAGATAAATAG+TGG | + | chr4.4:9246080-9246099 | None:intergenic | 25.0% |
| ! | TTTACAAACAAGTATAGACA+CGG | + | chr4.4:9247404-9247423 | None:intergenic | 25.0% |
| ! | TTTAGCAGAAAAAGCAAATT+AGG | + | chr4.4:9246112-9246131 | None:intergenic | 25.0% |
| !! | AACTTTAGATTGGTAATTGT+GGG | + | chr4.4:9246435-9246454 | None:intergenic | 25.0% |
| !! | ATTTTAAATGAATTGAAGGG+TGG | - | chr4.4:9245774-9245793 | MS.gene28387:intron | 25.0% |
| !! | GATGAAAAGTGGAAATTTTT+AGG | + | chr4.4:9248278-9248297 | None:intergenic | 25.0% |
| !! | TACATACTCTTGATAATTGA+TGG | + | chr4.4:9246349-9246368 | None:intergenic | 25.0% |
| !! | TGAGATATTTGGTTCATAAT+TGG | - | chr4.4:9248051-9248070 | MS.gene28387:intron | 25.0% |
| !! | TTTTAATAAAATCTTAGGGG+AGG | + | chr4.4:9245980-9245999 | None:intergenic | 25.0% |
| !!! | AAGAGGGTTTTATATTATGA+AGG | - | chr4.4:9247027-9247046 | MS.gene28387:intron | 25.0% |
| !!! | AATGTTTTTTCCAAACTAGA+GGG | - | chr4.4:9246855-9246874 | MS.gene28387:intron | 25.0% |
| !!! | AATGTTTTTTCCAAACTAGA+GGG | + | chr4.4:9246874-9246855 | None:intergenic | 25.0% |
| !!! | ACAAACAAAAGCATTTTTGT+AGG | - | chr4.4:9247336-9247355 | MS.gene28387:intron | 25.0% |
| !!! | ACTAAATCAGTTATTTTCCT+TGG | - | chr4.4:9248232-9248251 | MS.gene28387:intron | 25.0% |
| !!! | GAATTTTAATGTTCCATATG+TGG | - | chr4.4:9247362-9247381 | MS.gene28387:intron | 25.0% |
| !!! | TAATGTTTTTTCCAAACTAG+AGG | - | chr4.4:9246854-9246873 | MS.gene28387:intron | 25.0% |
| !!! | TAATGTTTTTTCCAAACTAG+AGG | + | chr4.4:9246873-9246854 | None:intergenic | 25.0% |
| !!! | TGCTTTTTCTGCTAAAAATT+AGG | - | chr4.4:9246116-9246135 | MS.gene28387:intron | 25.0% |
| !!! | TGTTTTTCTGAGATTTGTAT+TGG | - | chr4.4:9247959-9247978 | MS.gene28387:intron | 25.0% |
| !!! | TTTTAAGAATGTCAAGTCAA+AGG | - | chr4.4:9249024-9249043 | MS.gene28387:CDS | 25.0% |
| AAAACCAGCTAAATGTAGTA+TGG | + | chr4.4:9249008-9249027 | None:intergenic | 30.0% | |
| AACTTGAGTATACATTTGGA+AGG | - | chr4.4:9245483-9245502 | MS.gene28387:intron | 30.0% | |
| AAGAAAATATGAGAGCAAGT+GGG | + | chr4.4:9247617-9247636 | None:intergenic | 30.0% | |
| AATGATACCAAATTCATCAC+AGG | - | chr4.4:9246296-9246315 | MS.gene28387:intron | 30.0% | |
| AATTTGAATACCTTGTCCTT+TGG | - | chr4.4:9247285-9247304 | MS.gene28387:intron | 30.0% | |
| AGAGAAGAATGAGAGATTAA+GGG | - | chr4.4:9244785-9244804 | MS.gene28387:intron | 30.0% | |
| ATGTATACCTGTGATGAATT+TGG | + | chr4.4:9246306-9246325 | None:intergenic | 30.0% | |
| ATGTTAGAGATAAATAGTGG+AGG | + | chr4.4:9246077-9246096 | None:intergenic | 30.0% | |
| CAATCTGCATTTAGCAAATA+GGG | - | chr4.4:9245711-9245730 | MS.gene28387:intron | 30.0% | |
| CCATCCTTCATCTTAATTAA+TGG | + | chr4.4:9246729-9246748 | None:intergenic | 30.0% | |
| CCATTAATTAAGATGAAGGA+TGG | - | chr4.4:9246726-9246745 | MS.gene28387:intron | 30.0% | |
| CTTAAACAGCACAGAAAATT+AGG | + | chr4.4:9245614-9245633 | None:intergenic | 30.0% | |
| CTTGTCAATAACATCAAGTT+TGG | + | chr4.4:9245441-9245460 | None:intergenic | 30.0% | |
| GAAATGTAAATAAAACCTGC+TGG | + | chr4.4:9248362-9248381 | None:intergenic | 30.0% | |
| GAACTAAAAAGTTGTATTGG+AGG | + | chr4.4:9246998-9247017 | None:intergenic | 30.0% | |
| GTGTGCACAGTTAAAATTAA+CGG | - | chr4.4:9246778-9246797 | MS.gene28387:intron | 30.0% | |
| GTTAATAAGCTTGCAACTAT+TGG | + | chr4.4:9247928-9247947 | None:intergenic | 30.0% | |
| GTTTCAATTCTCATGATCTA+GGG | - | chr4.4:9247642-9247661 | MS.gene28387:intron | 30.0% | |
| TAAAAAGTTGTATTGGAGGA+GGG | + | chr4.4:9246994-9247013 | None:intergenic | 30.0% | |
| TAAGAAAATATGAGAGCAAG+TGG | + | chr4.4:9247618-9247637 | None:intergenic | 30.0% | |
| TAATTCAATAGGTGTATCTC+TGG | - | chr4.4:9248936-9248955 | MS.gene28387:CDS | 30.0% | |
| TATAAAACCCTCTTCATTTG+GGG | + | chr4.4:9247021-9247040 | None:intergenic | 30.0% | |
| TATATTCAGTATGGTAGACA+CGG | - | chr4.4:9244573-9244592 | MS.gene28387:CDS | 30.0% | |
| TGGAAGAAATAGAGTACATT+GGG | + | chr4.4:9247080-9247099 | None:intergenic | 30.0% | |
| TGGAGAAAACATATAAACGA+CGG | - | chr4.4:9246666-9246685 | MS.gene28387:intron | 30.0% | |
| TGTTTCAATTCTCATGATCT+AGG | - | chr4.4:9247641-9247660 | MS.gene28387:intron | 30.0% | |
| TTACAAACAAGTATAGACAC+GGG | + | chr4.4:9247403-9247422 | None:intergenic | 30.0% | |
| ! | AACCAGTAGCCTTTTATAAT+TGG | + | chr4.4:9247203-9247222 | None:intergenic | 30.0% |
| ! | AAGAAATTTTCCAAAGGACA+AGG | + | chr4.4:9247298-9247317 | None:intergenic | 30.0% |
| ! | AATAGTGATGGAACTTCTTA+AGG | - | chr4.4:9244740-9244759 | MS.gene28387:CDS | 30.0% |
| ! | ACCAGTAGCCTTTTATAATT+GGG | + | chr4.4:9247202-9247221 | None:intergenic | 30.0% |
| ! | ACTTGCTCTCATATTTTCTT+AGG | - | chr4.4:9247617-9247636 | MS.gene28387:intron | 30.0% |
| ! | ACTTTAGATTGGTAATTGTG+GGG | + | chr4.4:9246434-9246453 | None:intergenic | 30.0% |
| ! | AGTTAACGGTGTTAATCTAA+GGG | + | chr4.4:9246043-9246062 | None:intergenic | 30.0% |
| ! | ATTTGTATTGGCAGCTATAT+TGG | - | chr4.4:9247971-9247990 | MS.gene28387:intron | 30.0% |
| ! | GAACTTTAGATTGGTAATTG+TGG | + | chr4.4:9246436-9246455 | None:intergenic | 30.0% |
| ! | TAACGGATGTTAGTATCTAA+GGG | - | chr4.4:9246795-9246814 | MS.gene28387:intron | 30.0% |
| ! | TAGTTAACGGTGTTAATCTA+AGG | + | chr4.4:9246044-9246063 | None:intergenic | 30.0% |
| ! | TCAATTTTACATCAAAACCC+TGG | + | chr4.4:9247527-9247546 | None:intergenic | 30.0% |
| ! | TGAAAAAAAGGAAGGGTTTT+GGG | - | chr4.4:9247150-9247169 | MS.gene28387:intron | 30.0% |
| ! | TGGTGTATTCTTGAGAATTT+TGG | - | chr4.4:9248473-9248492 | MS.gene28387:CDS | 30.0% |
| ! | TGGTTAGTCATTGAGATATT+TGG | - | chr4.4:9248040-9248059 | MS.gene28387:intron | 30.0% |
| ! | TGTCTTTTGATAAAACCTCA+GGG | - | chr4.4:9246886-9246905 | MS.gene28387:intron | 30.0% |
| ! | TTAACGGATGTTAGTATCTA+AGG | - | chr4.4:9246794-9246813 | MS.gene28387:intron | 30.0% |
| ! | TTTGTATTGGCAGCTATATT+GGG | - | chr4.4:9247972-9247991 | MS.gene28387:intron | 30.0% |
| ! | TTTTTGTCTTCATAGGTTGT+TGG | - | chr4.4:9249116-9249135 | MS.gene28387:CDS | 30.0% |
| !!! | AGATTAAGGGAGAGTTTTTT+TGG | - | chr4.4:9246756-9246775 | MS.gene28387:intron | 30.0% |
| !!! | ATCGTTTTGGTTGTTGTATA+TGG | - | chr4.4:9247499-9247518 | MS.gene28387:intron | 30.0% |
| !!! | ATGTTTTTTCCAAACTAGAG+GGG | - | chr4.4:9246856-9246875 | MS.gene28387:intron | 30.0% |
| !!! | ATGTTTTTTCCAAACTAGAG+GGG | + | chr4.4:9246875-9246856 | None:intergenic | 30.0% |
| !!! | CTTTTTCAGAATGAATTGAC+AGG | - | chr4.4:9248400-9248419 | MS.gene28387:CDS | 30.0% |
| !!! | TTTTAACTTGCTAAAACTCG+AGG | + | chr4.4:9245745-9245764 | None:intergenic | 30.0% |
| AAAAAGTTGTATTGGAGGAG+GGG | + | chr4.4:9246993-9247012 | None:intergenic | 35.0% | |
| AACGGATGTTAGTATCTAAG+GGG | - | chr4.4:9246796-9246815 | MS.gene28387:intron | 35.0% | |
| AACTCCATAAGATCACCTTT+AGG | - | chr4.4:9244642-9244661 | MS.gene28387:intron | 35.0% | |
| AAGAAATAGAGTACATTGGG+AGG | + | chr4.4:9247077-9247096 | None:intergenic | 35.0% | |
| AAGAAGTTCCATCACTATTC+TGG | + | chr4.4:9244739-9244758 | None:intergenic | 35.0% | |
| ACAATCTGGATTTGAAAAGG+AGG | - | chr4.4:9245325-9245344 | MS.gene28387:intron | 35.0% | |
| ACAGCCTTAACTGTATTATG+AGG | + | chr4.4:9249152-9249171 | None:intergenic | 35.0% | |
| ACTCATGAATCGTCTTAAAG+TGG | - | chr4.4:9245151-9245170 | MS.gene28387:intron | 35.0% | |
| ACTCCATAAGATCACCTTTA+GGG | - | chr4.4:9244643-9244662 | MS.gene28387:intron | 35.0% | |
| AGAAATAGAGTACATTGGGA+GGG | + | chr4.4:9247076-9247095 | None:intergenic | 35.0% | |
| AGAGCAAACACTAAAATTGC+AGG | + | chr4.4:9249082-9249101 | None:intergenic | 35.0% | |
| AGATCCATATCTCTTATGGT+GGG | + | chr4.4:9247889-9247908 | None:intergenic | 35.0% | |
| AGGATGGTGATTGAAGATTA+AGG | - | chr4.4:9246742-9246761 | MS.gene28387:intron | 35.0% | |
| ATAAAACCCTCTTCATTTGG+GGG | + | chr4.4:9247020-9247039 | None:intergenic | 35.0% | |
| ATGACAAGCATAAGACATAC+AGG | + | chr4.4:9248895-9248914 | None:intergenic | 35.0% | |
| ATGATTTCGAAAGGAAGTTC+AGG | - | chr4.4:9244997-9245016 | MS.gene28387:intron | 35.0% | |
| ATGTATACTACAGCAAGACA+TGG | + | chr4.4:9246270-9246289 | None:intergenic | 35.0% | |
| CAAACCATACTACATTTAGC+TGG | - | chr4.4:9249001-9249020 | MS.gene28387:CDS | 35.0% | |
| CAATGCATAAGACATGGATA+AGG | + | chr4.4:9248169-9248188 | None:intergenic | 35.0% | |
| CACTTATAATTGGGACCAAA+GGG | + | chr4.4:9247132-9247151 | None:intergenic | 35.0% | |
| CAGCTAAATGTAGTATGGTT+TGG | + | chr4.4:9249003-9249022 | None:intergenic | 35.0% | |
| CATGTAATCATAACCATCCT+CGG | + | chr4.4:9244844-9244863 | None:intergenic | 35.0% | |
| CCTTTGGTCCCAATTATAAA+AGG | - | chr4.4:9247191-9247210 | MS.gene28387:intron | 35.0% | |
| CCTTTGTGACTTTACAAGTT+CGG | + | chr4.4:9247560-9247579 | None:intergenic | 35.0% | |
| CTAAAAAGTTGTATTGGAGG+AGG | + | chr4.4:9246995-9247014 | None:intergenic | 35.0% | |
| GAGAGAAGAATGAGAGATTA+AGG | - | chr4.4:9244784-9244803 | MS.gene28387:intron | 35.0% | |
| GAGGATGGTTATGATTACAT+GGG | - | chr4.4:9244843-9244862 | MS.gene28387:intron | 35.0% | |
| GAGTATACATTTGGAAGGAA+GGG | - | chr4.4:9245488-9245507 | MS.gene28387:intron | 35.0% | |
| GCAATCTGCATTTAGCAAAT+AGG | - | chr4.4:9245710-9245729 | MS.gene28387:intron | 35.0% | |
| GCTGAACTTGAGTATACATT+TGG | - | chr4.4:9245479-9245498 | MS.gene28387:intron | 35.0% | |
| GGAACAATCTGGATTTGAAA+AGG | - | chr4.4:9245322-9245341 | MS.gene28387:intron | 35.0% | |
| GGAACATGAAGGTAATGTAA+TGG | + | chr4.4:9244676-9244695 | None:intergenic | 35.0% | |
| GGATGGTGATTGAAGATTAA+GGG | - | chr4.4:9246743-9246762 | MS.gene28387:intron | 35.0% | |
| GGGGAACTAAAAAGTTGTAT+TGG | + | chr4.4:9247001-9247020 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGTACAT+TGG | + | chr4.4:9247081-9247100 | None:intergenic | 35.0% | |
| TAAAGTGGTTACTGAGCAAA+AGG | - | chr4.4:9245166-9245185 | MS.gene28387:intron | 35.0% | |
| TACTCTTACTTTCTCACCTT+AGG | - | chr4.4:9245800-9245819 | MS.gene28387:intron | 35.0% | |
| TAGATCCATATCTCTTATGG+TGG | + | chr4.4:9247890-9247909 | None:intergenic | 35.0% | |
| TATACTGCTATGTTAGCATG+TGG | - | chr4.4:9247681-9247700 | MS.gene28387:intron | 35.0% | |
| TATCCAGTATCATCAAGCAA+TGG | + | chr4.4:9246486-9246505 | None:intergenic | 35.0% | |
| TCACTTATAATTGGGACCAA+AGG | + | chr4.4:9247133-9247152 | None:intergenic | 35.0% | |
| TCCCAATTATAAAAGGCTAC+TGG | - | chr4.4:9247198-9247217 | MS.gene28387:intron | 35.0% | |
| TCTCAAATGAGTAATGAACG+AGG | - | chr4.4:9248850-9248869 | MS.gene28387:CDS | 35.0% | |
| TCTGCAGCATAAGCTTAATA+GGG | - | chr4.4:9245199-9245218 | MS.gene28387:CDS | 35.0% | |
| TCTTATCGAGAAGCTTGAAA+AGG | - | chr4.4:9244875-9244894 | MS.gene28387:CDS | 35.0% | |
| TCTTCAAGTCATGCTTAAGT+TGG | - | chr4.4:9247797-9247816 | MS.gene28387:intron | 35.0% | |
| TGACCAAAAAAAGCTGAAGA+TGG | - | chr4.4:9249055-9249074 | MS.gene28387:CDS | 35.0% | |
| TGAGTATACATTTGGAAGGA+AGG | - | chr4.4:9245487-9245506 | MS.gene28387:intron | 35.0% | |
| TGATATAAACGGGCAATTAC+TGG | + | chr4.4:9248776-9248795 | None:intergenic | 35.0% | |
| TGTTATTGACAAGAGACTTG+AGG | - | chr4.4:9245448-9245467 | MS.gene28387:intron | 35.0% | |
| TTAGCATGTGGCAACTATAA+TGG | - | chr4.4:9247693-9247712 | MS.gene28387:intron | 35.0% | |
| TTCAAATCCAGATTGTTCCA+AGG | + | chr4.4:9245321-9245340 | None:intergenic | 35.0% | |
| TTCATAACTCGAGTTACAGA+AGG | - | chr4.4:9248307-9248326 | MS.gene28387:intron | 35.0% | |
| TTCTATCTATTCTAACCAGC+AGG | - | chr4.4:9248344-9248363 | MS.gene28387:CDS | 35.0% | |
| TTCTGCAGCATAAGCTTAAT+AGG | - | chr4.4:9245198-9245217 | MS.gene28387:CDS | 35.0% | |
| TTGTTGAATGAGACCGTAAT+TGG | + | chr4.4:9245273-9245292 | None:intergenic | 35.0% | |
| TTTGGTGGAAAAGTGATGAA+AGG | + | chr4.4:9246163-9246182 | None:intergenic | 35.0% | |
| ! | AGGACAAGCATTTTAAGCTT+CGG | - | chr4.4:9245105-9245124 | MS.gene28387:intron | 35.0% |
| ! | ATGTCTTGCTGTAGTATACA+TGG | - | chr4.4:9246269-9246288 | MS.gene28387:intron | 35.0% |
| ! | CAATAAAAGTGCACCACATA+TGG | + | chr4.4:9247378-9247397 | None:intergenic | 35.0% |
| ! | CCTTTTATAATTGGGACCAA+AGG | + | chr4.4:9247194-9247213 | None:intergenic | 35.0% |
| ! | CTTTAGATTGGTAATTGTGG+GGG | + | chr4.4:9246433-9246452 | None:intergenic | 35.0% |
| ! | GAAAAAAAGGAAGGGTTTTG+GGG | - | chr4.4:9247151-9247170 | MS.gene28387:intron | 35.0% |
| ! | GCATATGAATTTGGAGCATA+AGG | + | chr4.4:9246547-9246566 | None:intergenic | 35.0% |
| ! | GGATACAGATTTTACTACCT+TGG | + | chr4.4:9248745-9248764 | None:intergenic | 35.0% |
| ! | GTCTTTTGATAAAACCTCAG+GGG | - | chr4.4:9246887-9246906 | MS.gene28387:intron | 35.0% |
| ! | GTGAAAAAAAGGAAGGGTTT+TGG | - | chr4.4:9247149-9247168 | MS.gene28387:intron | 35.0% |
| ! | GTGTCTTTTGATAAAACCTC+AGG | - | chr4.4:9246885-9246904 | MS.gene28387:intron | 35.0% |
| ! | GTTACAGAAGGTGTATTAAC+TGG | - | chr4.4:9248319-9248338 | MS.gene28387:CDS | 35.0% |
| ! | TCACATCAGTAGTTGTGTTT+TGG | + | chr4.4:9246181-9246200 | None:intergenic | 35.0% |
| ! | TGTTCCAAGGTATCCATATT+GGG | + | chr4.4:9245308-9245327 | None:intergenic | 35.0% |
| ! | TTGTTCCAAGGTATCCATAT+TGG | + | chr4.4:9245309-9245328 | None:intergenic | 35.0% |
| ! | TTTGCGATTTTCTTGCACAT+TGG | + | chr4.4:9246703-9246722 | None:intergenic | 35.0% |
| ! | TTTGGTTCATAATTGGTGTG+AGG | - | chr4.4:9248058-9248077 | MS.gene28387:intron | 35.0% |
| !! | AAAAAAAGGAAGGGTTTTGG+GGG | - | chr4.4:9247152-9247171 | MS.gene28387:intron | 35.0% |
| !! | AGAAGGTTGATGATTTCGAA+AGG | - | chr4.4:9244988-9245007 | MS.gene28387:intron | 35.0% |
| !! | CGCTTGATGATGCTTATAAA+TGG | - | chr4.4:9245060-9245079 | MS.gene28387:intron | 35.0% |
| !! | TAACTCGGTGCATATGAATT+TGG | + | chr4.4:9246556-9246575 | None:intergenic | 35.0% |
| !!! | AGGGTTTTGGAAAAAAAGGA+AGG | + | chr4.4:9247109-9247128 | None:intergenic | 35.0% |
| !!! | TGTTTTTTCCAAACTAGAGG+GGG | - | chr4.4:9246857-9246876 | MS.gene28387:intron | 35.0% |
| AAACTCCCAAACAAAGCCTA+AGG | + | chr4.4:9245819-9245838 | None:intergenic | 40.0% | |
| AACTTCTCTTGGACATCCTT+TGG | + | chr4.4:9249294-9249313 | None:intergenic | 40.0% | |
| AAGAATGAGAGATTAAGGGC+TGG | - | chr4.4:9244789-9244808 | MS.gene28387:intron | 40.0% | |
| AAGACATACAGGATAAACGC+AGG | + | chr4.4:9248884-9248903 | None:intergenic | 40.0% | |
| AAGGATGTCCAAGAGAAGTT+TGG | - | chr4.4:9249294-9249313 | MS.gene28387:CDS | 40.0% | |
| AATACTTCTCGACCACAGTT+CGG | + | chr4.4:9249320-9249339 | None:intergenic | 40.0% | |
| ACGGATGTTAGTATCTAAGG+GGG | - | chr4.4:9246797-9246816 | MS.gene28387:intron | 40.0% | |
| AGAGACTCTTGCCATGAAAA+CGG | + | chr4.4:9244698-9244717 | None:intergenic | 40.0% | |
| AGAGATCAAAGATCTTGCAG+AGG | - | chr4.4:9245526-9245545 | MS.gene28387:intron | 40.0% | |
| ATGCCCTAAAGGTGATCTTA+TGG | + | chr4.4:9244649-9244668 | None:intergenic | 40.0% | |
| ATGGATACCTTGGAACAATC+TGG | - | chr4.4:9245311-9245330 | MS.gene28387:intron | 40.0% | |
| ATTTCGAAAGGAAGTTCAGG+AGG | - | chr4.4:9245000-9245019 | MS.gene28387:intron | 40.0% | |
| CAAGTGCAACCAATGTGTTT+CGG | - | chr4.4:9244619-9244638 | MS.gene28387:intron | 40.0% | |
| CCGAACTTGTAAAGTCACAA+AGG | - | chr4.4:9247557-9247576 | MS.gene28387:intron | 40.0% | |
| CGAGGATGGTTATGATTACA+TGG | - | chr4.4:9244842-9244861 | MS.gene28387:intron | 40.0% | |
| GAAACTACCTTTCGGAAAAG+TGG | + | chr4.4:9245584-9245603 | None:intergenic | 40.0% | |
| GAAATAGAGTACATTGGGAG+GGG | + | chr4.4:9247075-9247094 | None:intergenic | 40.0% | |
| GATTCAGAATTTCACCGAAG+CGG | - | chr4.4:9245034-9245053 | MS.gene28387:intron | 40.0% | |
| GCAAGTGGGAAAAACATAGA+TGG | + | chr4.4:9247603-9247622 | None:intergenic | 40.0% | |
| GCAAGTGTGAAACTACCTTT+CGG | + | chr4.4:9245592-9245611 | None:intergenic | 40.0% | |
| GCTTGAAAAGGAGAAGCTTA+AGG | - | chr4.4:9244887-9244906 | MS.gene28387:CDS | 40.0% | |
| GGTCTCATTCAACAAGAACA+GGG | - | chr4.4:9245278-9245297 | MS.gene28387:intron | 40.0% | |
| GGTTGTTGTATATGGTTCCA+GGG | - | chr4.4:9247507-9247526 | MS.gene28387:intron | 40.0% | |
| GTCTCATTCAACAAGAACAG+GGG | - | chr4.4:9245279-9245298 | MS.gene28387:intron | 40.0% | |
| GTGGAAAAGTGATGAAAGGT+CGG | + | chr4.4:9246159-9246178 | None:intergenic | 40.0% | |
| GTGGGAAAAACATAGATGGA+AGG | + | chr4.4:9247599-9247618 | None:intergenic | 40.0% | |
| TAAGCTTCGGACTGAGTATA+GGG | - | chr4.4:9245118-9245137 | MS.gene28387:intron | 40.0% | |
| TACATTTGGAAGGAAGGGTA+AGG | - | chr4.4:9245493-9245512 | MS.gene28387:intron | 40.0% | |
| TATAATTGGGACCAAAGGGA+GGG | + | chr4.4:9247128-9247147 | None:intergenic | 40.0% | |
| TATGGAGTTCCGAAACACAT+TGG | + | chr4.4:9244631-9244650 | None:intergenic | 40.0% | |
| TATTCTGGCATCAGAAGTAG+TGG | + | chr4.4:9244724-9244743 | None:intergenic | 40.0% | |
| TCAATTCTCATGATCTAGGG+AGG | - | chr4.4:9247645-9247664 | MS.gene28387:intron | 40.0% | |
| TCATAATTGGTGTGAGGATC+TGG | - | chr4.4:9248064-9248083 | MS.gene28387:intron | 40.0% | |
| TCATCACTGTCAGAATCAGT+CGG | + | chr4.4:9244942-9244961 | None:intergenic | 40.0% | |
| TCTCATTCAACAAGAACAGG+GGG | - | chr4.4:9245280-9245299 | MS.gene28387:intron | 40.0% | |
| TCTGGATGCTAATCAGAAGA+AGG | - | chr4.4:9244971-9244990 | MS.gene28387:intron | 40.0% | |
| TGGAAAAGTGATGAAAGGTC+GGG | + | chr4.4:9246158-9246177 | None:intergenic | 40.0% | |
| TGGTTACTGAGCAAAAGGAT+AGG | - | chr4.4:9245171-9245190 | MS.gene28387:CDS | 40.0% | |
| TGGTTGTTGTATATGGTTCC+AGG | - | chr4.4:9247506-9247525 | MS.gene28387:intron | 40.0% | |
| TTAAGCTTCGGACTGAGTAT+AGG | - | chr4.4:9245117-9245136 | MS.gene28387:intron | 40.0% | |
| TTAGTTCCCCCAAATGAAGA+GGG | - | chr4.4:9247011-9247030 | MS.gene28387:intron | 40.0% | |
| TTATAATTGGGACCAAAGGG+AGG | + | chr4.4:9247129-9247148 | None:intergenic | 40.0% | |
| TTCTGATGCCAGAATAGTGA+TGG | - | chr4.4:9244728-9244747 | MS.gene28387:CDS | 40.0% | |
| TTGGAAAAAAAGGAAGGAGC+AGG | + | chr4.4:9247103-9247122 | None:intergenic | 40.0% | |
| ! | AGTATGGTAGACACGGTTTT+CGG | - | chr4.4:9244580-9244599 | MS.gene28387:CDS | 40.0% |
| ! | AGTGATGGAACTTCTTAAGG+AGG | - | chr4.4:9244743-9244762 | MS.gene28387:CDS | 40.0% |
| ! | CTATATTGGGCACTGTTCTT+TGG | - | chr4.4:9247985-9248004 | MS.gene28387:intron | 40.0% |
| ! | GTTCCATTGCTTGATGATAC+TGG | - | chr4.4:9246480-9246499 | MS.gene28387:intron | 40.0% |
| ! | TAACGGTGTTAATCTAAGGG+AGG | + | chr4.4:9246040-9246059 | None:intergenic | 40.0% |
| ! | TATGGTTTGGACTATTCTGC+CGG | + | chr4.4:9248990-9249009 | None:intergenic | 40.0% |
| ! | TGATTCTGACAGTGATGATG+AGG | - | chr4.4:9244944-9244963 | MS.gene28387:CDS | 40.0% |
| ! | TGTCTTCAAAGCGCTTAATG+CGG | - | chr4.4:9249169-9249188 | MS.gene28387:CDS | 40.0% |
| ! | TTTAGTTCCCCCAAATGAAG+AGG | - | chr4.4:9247010-9247029 | MS.gene28387:intron | 40.0% |
| ! | TTTTGATAAAACCTCAGGGG+AGG | - | chr4.4:9246890-9246909 | MS.gene28387:intron | 40.0% |
| ! | TTTTTCCAAAACCCTCCCTT+TGG | - | chr4.4:9247114-9247133 | MS.gene28387:intron | 40.0% |
| !! | AAGAAGACCACTTTTCCGAA+AGG | - | chr4.4:9245574-9245593 | MS.gene28387:intron | 40.0% |
| !! | CATCAGTAGTTGTGTTTTGG+TGG | + | chr4.4:9246178-9246197 | None:intergenic | 40.0% |
| !! | GCTTAATAGGGCTTTGAGAT+TGG | - | chr4.4:9245211-9245230 | MS.gene28387:CDS | 40.0% |
| !! | GGCAACTATAATGGTGTTGT+TGG | - | chr4.4:9247702-9247721 | MS.gene28387:intron | 40.0% |
| !! | TCTCACCTTAGGCTTTGTTT+GGG | - | chr4.4:9245811-9245830 | MS.gene28387:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr4.4:9245818-9245837 | MS.gene28387:intron | 40.0% |
| !! | TTCTCACCTTAGGCTTTGTT+TGG | - | chr4.4:9245810-9245829 | MS.gene28387:intron | 40.0% |
| !!! | AGGGAGGGTTTTGGAAAAAA+AGG | + | chr4.4:9247113-9247132 | None:intergenic | 40.0% |
| !!! | GGACCATCTTCAGCTTTTTT+TGG | + | chr4.4:9249061-9249080 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGCAAAAGCCAA+AGG | - | chr4.4:9247720-9247739 | MS.gene28387:intron | 40.0% |
| AAGGAGGATAAACCTGCTCA+AGG | - | chr4.4:9245341-9245360 | MS.gene28387:intron | 45.0% | |
| ACCACCCACCATAAGAGATA+TGG | - | chr4.4:9247882-9247901 | MS.gene28387:intron | 45.0% | |
| ACTTCTTAAGGAGGTGGAGA+AGG | - | chr4.4:9244752-9244771 | MS.gene28387:CDS | 45.0% | |
| AGCTCCAGATGCTCTCAATA+AGG | - | chr4.4:9247749-9247768 | MS.gene28387:intron | 45.0% | |
| ATCATAACCATCCTCGGTCT+CGG | + | chr4.4:9244838-9244857 | None:intergenic | 45.0% | |
| ATCATCAAGCGTATCCGCTT+CGG | + | chr4.4:9245051-9245070 | None:intergenic | 45.0% | |
| CATCCTTTGGCGTTTCAATC+TGG | + | chr4.4:9249281-9249300 | None:intergenic | 45.0% | |
| CCATGAAAACGGGAACATGA+AGG | + | chr4.4:9244687-9244706 | None:intergenic | 45.0% | |
| CCTGATAACCCTGCCAATTA+CGG | - | chr4.4:9245257-9245276 | MS.gene28387:intron | 45.0% | |
| CGGACTGAGTATAGGGTTAT+TGG | - | chr4.4:9245125-9245144 | MS.gene28387:intron | 45.0% | |
| CGGTCTCATTCAACAAGAAC+AGG | - | chr4.4:9245277-9245296 | MS.gene28387:intron | 45.0% | |
| CTCATTCAACAAGAACAGGG+GGG | - | chr4.4:9245281-9245300 | MS.gene28387:intron | 45.0% | |
| GAAAAAAAGGAAGGAGCAGG+TGG | + | chr4.4:9247100-9247119 | None:intergenic | 45.0% | |
| GAATGAGACCGTAATTGGCA+GGG | + | chr4.4:9245268-9245287 | None:intergenic | 45.0% | |
| GAGACTCTTGCCATGAAAAC+GGG | + | chr4.4:9244697-9244716 | None:intergenic | 45.0% | |
| GATGGAACTTCTTAAGGAGG+TGG | - | chr4.4:9244746-9244765 | MS.gene28387:CDS | 45.0% | |
| GGAAAAGTGATGAAAGGTCG+GGG | + | chr4.4:9246157-9246176 | None:intergenic | 45.0% | |
| GGGCAATTACTGGTAGAAGA+AGG | + | chr4.4:9248766-9248785 | None:intergenic | 45.0% | |
| GTTCCAGATTGAAACGCCAA+AGG | - | chr4.4:9249275-9249294 | MS.gene28387:CDS | 45.0% | |
| TCATTCAACAAGAACAGGGG+GGG | - | chr4.4:9245282-9245301 | MS.gene28387:intron | 45.0% | |
| TGAATGAGACCGTAATTGGC+AGG | + | chr4.4:9245269-9245288 | None:intergenic | 45.0% | |
| TGCAATTCCAGTGAGAGAAC+AGG | + | chr4.4:9248107-9248126 | None:intergenic | 45.0% | |
| TGCGTGCAATGCATAAGACA+TGG | + | chr4.4:9248175-9248194 | None:intergenic | 45.0% | |
| TTAAGGAGGTGGAGAAGGAT+AGG | - | chr4.4:9244757-9244776 | MS.gene28387:CDS | 45.0% | |
| TTGGGGGTGGGAAAAATAGA+GGG | - | chr4.4:9245862-9245881 | MS.gene28387:intron | 45.0% | |
| TTTGGGGGTGGGAAAAATAG+AGG | - | chr4.4:9245861-9245880 | MS.gene28387:intron | 45.0% | |
| ! | CAGTGATGATGAGGAAGATC+TGG | - | chr4.4:9244953-9244972 | MS.gene28387:intron | 45.0% |
| ! | CCTTCATGTTCCCGTTTTCA+TGG | - | chr4.4:9244684-9244703 | MS.gene28387:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr4.4:9245823-9245842 | MS.gene28387:intron | 45.0% |
| ! | TCCATATCTCTTATGGTGGG+TGG | + | chr4.4:9247886-9247905 | None:intergenic | 45.0% |
| ! | TTTGAGATTGGTGCAGTGGA+AGG | - | chr4.4:9245223-9245242 | MS.gene28387:CDS | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr4.4:9245822-9245841 | MS.gene28387:intron | 45.0% |
| !! | GGTACCTTATTGAGAGCATC+TGG | + | chr4.4:9247756-9247775 | None:intergenic | 45.0% |
| !! | TGAGAGCATCTGGAGCTTTA+GGG | + | chr4.4:9247746-9247765 | None:intergenic | 45.0% |
| !! | TTCGTATCGATTCAACTCCG+AGG | + | chr4.4:9244916-9244935 | None:intergenic | 45.0% |
| !! | TTGAGAGCATCTGGAGCTTT+AGG | + | chr4.4:9247747-9247766 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAACATAAAAA+TGG | + | chr4.4:9247469-9247488 | None:intergenic | 5.0% |
| !!! | TTTTTATGTTTTTTTTTTTT+TGG | - | chr4.4:9247469-9247488 | MS.gene28387:intron | 5.0% |
| AGAGAAGTTTGGCCGAACTG+TGG | - | chr4.4:9249305-9249324 | MS.gene28387:CDS | 50.0% | |
| ATAGAGTACATTGGGAGGGG+AGG | + | chr4.4:9247072-9247091 | None:intergenic | 50.0% | |
| CACTCACATCCCCTCTAGTT+TGG | - | chr4.4:9246002-9246021 | MS.gene28387:intron | 50.0% | |
| CAGTTCGGCCAAACTTCTCT+TGG | + | chr4.4:9249305-9249324 | None:intergenic | 50.0% | |
| CCGTAATTGGCAGGGTTATC+AGG | + | chr4.4:9245260-9245279 | None:intergenic | 50.0% | |
| GCATCTTCATCTCCTTGAGC+AGG | + | chr4.4:9245356-9245375 | None:intergenic | 50.0% | |
| GCATTATGTAGAGCGACACG+AGG | - | chr4.4:9248677-9248696 | MS.gene28387:CDS | 50.0% | |
| GGAGAAGCTTAAGGAGACCT+CGG | - | chr4.4:9244896-9244915 | MS.gene28387:CDS | 50.0% | |
| GTAATGGCTGCATGCCCTAA+AGG | + | chr4.4:9244660-9244679 | None:intergenic | 50.0% | |
| GTATTGGAGGAGGGGTTGAA+GGG | + | chr4.4:9246985-9247004 | None:intergenic | 50.0% | |
| TAGAGTACATTGGGAGGGGA+GGG | + | chr4.4:9247071-9247090 | None:intergenic | 50.0% | |
| TGTATTGGAGGAGGGGTTGA+AGG | + | chr4.4:9246986-9247005 | None:intergenic | 50.0% | |
| TGTGACACCTGTTCTCTCAC+TGG | - | chr4.4:9248097-9248116 | MS.gene28387:intron | 50.0% | |
| TTCCACTGCAACTGGCATGA+AGG | - | chr4.4:9248964-9248983 | MS.gene28387:CDS | 50.0% | |
| ! | AAGGAAGGGTAAGGCTCTAG+AGG | - | chr4.4:9245502-9245521 | MS.gene28387:intron | 50.0% |
| !! | ATCTGGAGCTTTAGGGCCTT+TGG | + | chr4.4:9247739-9247758 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr4.4:9245821-9245840 | MS.gene28387:intron | 50.0% |
| AATTGCACTCACCTCCCCTG+AGG | + | chr4.4:9246904-9246923 | None:intergenic | 55.0% | |
| ACTGCAACTGGCATGAAGGC+CGG | - | chr4.4:9248968-9248987 | MS.gene28387:CDS | 55.0% | |
| ATGCCAGTTGCAGTGGAAGC+AGG | + | chr4.4:9248962-9248981 | None:intergenic | 55.0% | |
| ATTGATGCCGAGACCGAGGA+TGG | - | chr4.4:9244828-9244847 | MS.gene28387:intron | 55.0% | |
| CACACACACCCCCTCTAGTT+TGG | + | chr4.4:9246868-9246887 | None:intergenic | 55.0% | |
| CTCGGTCTCGGCATCAATGT+CGG | + | chr4.4:9244826-9244845 | None:intergenic | 55.0% | |
| GGGGCCCAATATGGATACCT+TGG | - | chr4.4:9245301-9245320 | MS.gene28387:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr4.4:9245827-9245846 | MS.gene28387:intron | 55.0% | |
| TGCTGCTGACAACGACGATG+AGG | - | chr4.4:9245373-9245392 | MS.gene28387:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr4.4:9245826-9245845 | MS.gene28387:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr4.4:9245828-9245847 | MS.gene28387:intron | 55.0% | |
| ! | TGGGACCAAAGGGAGGGTTT+TGG | + | chr4.4:9247122-9247141 | None:intergenic | 55.0% |
| ! | TTGGTGTGAGGATCTGGAGC+TGG | - | chr4.4:9248070-9248089 | MS.gene28387:intron | 55.0% |
| !! | GGGCTTTGAGATTGGTGCAG+TGG | - | chr4.4:9245219-9245238 | MS.gene28387:CDS | 55.0% |
| ACATTGGGAGGGGAGGGCTT+TGG | + | chr4.4:9247065-9247084 | None:intergenic | 60.0% | |
| AGAACAGGGGGGGCCCAATA+TGG | - | chr4.4:9245292-9245311 | MS.gene28387:intron | 60.0% | |
| ATTGGGAGGGGAGGGCTTTG+GGG | + | chr4.4:9247063-9247082 | None:intergenic | 60.0% | |
| CATTGGGAGGGGAGGGCTTT+GGG | + | chr4.4:9247064-9247083 | None:intergenic | 60.0% | |
| CGACATTGATGCCGAGACCG+AGG | - | chr4.4:9244824-9244843 | MS.gene28387:intron | 60.0% | |
| GAGGGGAAGGAAGGGCTTTG+GGG | - | chr4.4:9245845-9245864 | MS.gene28387:intron | 60.0% | |
| GGAGGGGAAGGAAGGGCTTT+GGG | - | chr4.4:9245844-9245863 | MS.gene28387:intron | 60.0% | |
| GGCCTTCATGCCAGTTGCAG+TGG | + | chr4.4:9248969-9248988 | None:intergenic | 60.0% | |
| TGGCCTGCTTCCACTGCAAC+TGG | - | chr4.4:9248956-9248975 | MS.gene28387:CDS | 60.0% | |
| TTGGAGGGGAGGGGAAGGAA+GGG | - | chr4.4:9245837-9245856 | MS.gene28387:intron | 60.0% | |
| TTTGGAGGGGAGGGGAAGGA+AGG | - | chr4.4:9245836-9245855 | MS.gene28387:intron | 60.0% | |
| ! | AGGGGAAGGAAGGGCTTTGG+GGG | - | chr4.4:9245846-9245865 | MS.gene28387:intron | 60.0% |
| !! | GAAGGAAGGGCTTTGGGGGT+GGG | - | chr4.4:9245850-9245869 | MS.gene28387:intron | 60.0% |
| GGAGTTTGGAGGGGAGGGGA+AGG | - | chr4.4:9245832-9245851 | MS.gene28387:intron | 65.0% | |
| GGGAGGGGAAGGAAGGGCTT+TGG | - | chr4.4:9245843-9245862 | MS.gene28387:intron | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+GGG | + | chr4.4:9247062-9247081 | None:intergenic | 65.0% |
| !! | GGAAGGAAGGGCTTTGGGGG+TGG | - | chr4.4:9245849-9245868 | MS.gene28387:intron | 65.0% |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr4.4:9247061-9247080 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9244567 | 9249347 | 9244567 | ID=MS.gene28387 |
| chr4.4 | mRNA | 9244567 | 9249347 | 9244567 | ID=MS.gene28387.t1;Parent=MS.gene28387 |
| chr4.4 | exon | 9248319 | 9249347 | 9248319 | ID=MS.gene28387.t1.exon1;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9248319 | 9249347 | 9248319 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9246336 | 9246386 | 9246336 | ID=MS.gene28387.t1.exon2;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9246336 | 9246386 | 9246336 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9246144 | 9246251 | 9246144 | ID=MS.gene28387.t1.exon3;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9246144 | 9246251 | 9246144 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9245168 | 9245263 | 9245168 | ID=MS.gene28387.t1.exon4;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9245168 | 9245263 | 9245168 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9244869 | 9244967 | 9244869 | ID=MS.gene28387.t1.exon5;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9244869 | 9244967 | 9244869 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9244724 | 9244783 | 9244724 | ID=MS.gene28387.t1.exon6;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9244724 | 9244783 | 9244724 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| chr4.4 | exon | 9244567 | 9244632 | 9244567 | ID=MS.gene28387.t1.exon7;Parent=MS.gene28387.t1 |
| chr4.4 | CDS | 9244567 | 9244632 | 9244567 | ID=cds.MS.gene28387.t1;Parent=MS.gene28387.t1 |
| Gene Sequence |
| Protein sequence |
