Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32143.t1 | XP_024630808.1 | 98 | 298 | 5 | 1 | 29 | 325 | 13 | 310 | 3.70E-133 | 484.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32143.t1 | Q8GWQ2 | 62.5 | 296 | 89 | 5 | 37 | 325 | 1 | 281 | 1.5e-82 | 307.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32143.t1 | A0A072VM41 | 98.0 | 296 | 5 | 1 | 31 | 325 | 27 | 322 | 1.1e-131 | 479.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene32143 | -0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene32143 | -0.81714 | 3.85E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene32143 | -0.800278 | 1.55E-48 | -1.69E-46 |
| MS.gene04932 | MS.gene32143 | 0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene32143 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene32143 | -0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene32143 | 0.801865 | 7.36E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene32143 | -0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene32143 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene32143 | -0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene32143 | -0.818311 | 2.09E-52 | -1.69E-46 |
| MS.gene050809 | MS.gene32143 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene05104 | MS.gene32143 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene32143 | 0.80943 | 1.90E-50 | -1.69E-46 |
| MS.gene051632 | MS.gene32143 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene32143 | -0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene32143 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene32143 | 0.808653 | 2.79E-50 | -1.69E-46 |
| MS.gene05244 | MS.gene32143 | 0.837441 | 5.19E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene32143 | -0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene32143 | 0.815303 | 9.91E-52 | -1.69E-46 |
| MS.gene052805 | MS.gene32143 | 0.800577 | 1.35E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene32143 | -0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene32143 | -0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene32143 | 0.830465 | 2.89E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene32143 | 0.824949 | 6.12E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene32143 | -0.808826 | 2.56E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene32143 | -0.80143 | 9.04E-49 | -1.69E-46 |
| MS.gene053776 | MS.gene32143 | 0.830104 | 3.54E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene32143 | -0.80054 | 1.37E-48 | -1.69E-46 |
| MS.gene054181 | MS.gene32143 | 0.834315 | 3.22E-56 | -1.69E-46 |
| MS.gene054290 | MS.gene32143 | 0.827869 | 1.23E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene32143 | -0.803119 | 4.06E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene32143 | 0.839393 | 1.63E-57 | -1.69E-46 |
| MS.gene054707 | MS.gene32143 | 0.803909 | 2.78E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene32143 | 0.815975 | 7.02E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene32143 | 0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene32143 | -0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene32143 | -0.818845 | 1.58E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene32143 | -0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene32143 | -0.804985 | 1.66E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene32143 | 0.803233 | 3.84E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene32143 | -0.822174 | 2.73E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene32143 | -0.813465 | 2.52E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene32143 | -0.812361 | 4.41E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene32143 | 0.851858 | 6.75E-61 | -1.69E-46 |
| MS.gene056591 | MS.gene32143 | 0.851512 | 8.46E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene32143 | -0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene056688 | MS.gene32143 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene32143 | 0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene057261 | MS.gene32143 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene32143 | -0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene32143 | 0.818513 | 1.88E-52 | -1.69E-46 |
| MS.gene058067 | MS.gene32143 | 0.801368 | 9.30E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene32143 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene32143 | -0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene058158 | MS.gene32143 | 0.81192 | 5.50E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene32143 | -0.809766 | 1.61E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene32143 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene058838 | MS.gene32143 | -0.822219 | 2.66E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene32143 | 0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene32143 | -0.809445 | 1.89E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene32143 | -0.802712 | 4.93E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene32143 | 0.825984 | 3.48E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene32143 | -0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene32143 | -0.802326 | 5.92E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene32143 | 0.811204 | 7.87E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene32143 | 0.825494 | 4.55E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene32143 | -0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene32143 | -0.818299 | 2.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32143.t1 | MTR_1g073860 | 97.635 | 296 | 6 | 1 | 31 | 325 | 27 | 322 | 0.0 | 576 |
| MS.gene32143.t1 | MTR_1g044155 | 66.667 | 309 | 81 | 7 | 36 | 325 | 54 | 359 | 1.29e-107 | 318 |
| MS.gene32143.t1 | MTR_1g079810 | 55.063 | 316 | 104 | 10 | 37 | 325 | 1 | 305 | 5.79e-81 | 248 |
| MS.gene32143.t1 | MTR_3g068035 | 60.360 | 222 | 70 | 5 | 105 | 314 | 86 | 301 | 6.78e-69 | 218 |
| MS.gene32143.t1 | MTR_5g091630 | 56.818 | 220 | 75 | 5 | 98 | 317 | 47 | 246 | 9.35e-66 | 207 |
| MS.gene32143.t1 | MTR_5g011520 | 74.675 | 154 | 39 | 0 | 98 | 251 | 100 | 253 | 2.96e-65 | 209 |
| MS.gene32143.t1 | MTR_8g036060 | 59.825 | 229 | 85 | 5 | 98 | 325 | 86 | 308 | 1.01e-63 | 204 |
| MS.gene32143.t1 | MTR_7g080980 | 52.941 | 272 | 101 | 6 | 48 | 306 | 1 | 258 | 1.35e-63 | 202 |
| MS.gene32143.t1 | MTR_4g098450 | 57.789 | 199 | 73 | 3 | 105 | 301 | 83 | 272 | 1.57e-58 | 190 |
| MS.gene32143.t1 | MTR_3g100470 | 50.829 | 181 | 81 | 3 | 90 | 266 | 66 | 242 | 6.15e-57 | 186 |
| MS.gene32143.t1 | MTR_5g080580 | 67.832 | 143 | 46 | 0 | 105 | 247 | 96 | 238 | 1.86e-53 | 178 |
| MS.gene32143.t1 | MTR_1g073870 | 51.230 | 244 | 53 | 6 | 85 | 325 | 39 | 219 | 1.00e-48 | 162 |
| MS.gene32143.t1 | MTR_5g066020 | 42.063 | 252 | 117 | 7 | 63 | 302 | 9 | 243 | 6.71e-44 | 151 |
| MS.gene32143.t1 | MTR_5g089600 | 32.143 | 168 | 103 | 3 | 89 | 245 | 68 | 235 | 8.21e-28 | 108 |
| MS.gene32143.t1 | MTR_5g010330 | 34.000 | 200 | 112 | 7 | 97 | 284 | 103 | 294 | 5.57e-24 | 100 |
| MS.gene32143.t1 | MTR_1g053685 | 29.775 | 178 | 115 | 2 | 97 | 264 | 84 | 261 | 1.12e-21 | 93.2 |
| MS.gene32143.t1 | MTR_1g079780 | 38.235 | 136 | 80 | 2 | 107 | 238 | 88 | 223 | 1.71e-21 | 93.6 |
| MS.gene32143.t1 | MTR_4g057525 | 32.000 | 175 | 107 | 3 | 83 | 247 | 23 | 195 | 4.08e-21 | 90.9 |
| MS.gene32143.t1 | MTR_4g057487 | 31.677 | 161 | 100 | 2 | 97 | 247 | 16 | 176 | 6.95e-21 | 90.1 |
| MS.gene32143.t1 | MTR_1g061530 | 40.351 | 114 | 64 | 2 | 128 | 237 | 144 | 257 | 1.11e-20 | 91.7 |
| MS.gene32143.t1 | MTR_5g089700 | 32.903 | 155 | 94 | 3 | 96 | 241 | 73 | 226 | 2.10e-20 | 88.6 |
| MS.gene32143.t1 | MTR_6g061670 | 38.793 | 116 | 68 | 1 | 125 | 237 | 130 | 245 | 4.47e-20 | 89.4 |
| MS.gene32143.t1 | MTR_6g061670 | 38.793 | 116 | 68 | 1 | 125 | 237 | 125 | 240 | 4.49e-20 | 89.4 |
| MS.gene32143.t1 | MTR_5g089090 | 35.065 | 154 | 92 | 2 | 98 | 244 | 28 | 180 | 6.54e-20 | 86.7 |
| MS.gene32143.t1 | MTR_1g032910 | 31.056 | 161 | 99 | 2 | 97 | 245 | 100 | 260 | 1.32e-19 | 87.8 |
| MS.gene32143.t1 | MTR_7g077120 | 35.329 | 167 | 99 | 3 | 96 | 256 | 125 | 288 | 1.37e-18 | 85.5 |
| MS.gene32143.t1 | MTR_7g116320 | 40.708 | 113 | 67 | 0 | 125 | 237 | 143 | 255 | 1.73e-18 | 85.5 |
| MS.gene32143.t1 | MTR_4g098460 | 36.986 | 146 | 79 | 4 | 98 | 237 | 57 | 195 | 1.71e-17 | 81.6 |
| MS.gene32143.t1 | MTR_8g036160 | 35.948 | 153 | 90 | 2 | 128 | 276 | 145 | 293 | 2.33e-17 | 82.0 |
| MS.gene32143.t1 | MTR_8g031100 | 36.628 | 172 | 103 | 3 | 91 | 256 | 118 | 289 | 2.78e-17 | 81.6 |
| MS.gene32143.t1 | MTR_7g116320 | 39.200 | 125 | 72 | 1 | 125 | 245 | 143 | 267 | 3.18e-17 | 80.5 |
| MS.gene32143.t1 | MTR_1g076710 | 38.793 | 116 | 67 | 2 | 125 | 237 | 134 | 248 | 8.10e-17 | 80.5 |
| MS.gene32143.t1 | MTR_4g069110 | 39.175 | 97 | 59 | 0 | 96 | 192 | 32 | 128 | 1.24e-16 | 76.6 |
| MS.gene32143.t1 | MTR_8g098390 | 31.944 | 144 | 94 | 3 | 116 | 256 | 157 | 299 | 2.96e-16 | 79.0 |
| MS.gene32143.t1 | MTR_4g055813 | 37.063 | 143 | 81 | 4 | 115 | 249 | 4 | 145 | 3.86e-16 | 77.8 |
| MS.gene32143.t1 | MTR_7g074935 | 43.363 | 113 | 61 | 1 | 128 | 237 | 130 | 242 | 5.59e-16 | 77.8 |
| MS.gene32143.t1 | MTR_4g098460 | 36.000 | 150 | 80 | 4 | 98 | 237 | 57 | 200 | 7.75e-16 | 77.0 |
| MS.gene32143.t1 | MTR_4g055803 | 41.379 | 116 | 62 | 3 | 128 | 237 | 128 | 243 | 3.05e-15 | 76.6 |
| MS.gene32143.t1 | MTR_5g011620 | 29.577 | 142 | 96 | 2 | 129 | 268 | 119 | 258 | 9.95e-15 | 75.5 |
| MS.gene32143.t1 | MTR_8g078930 | 31.210 | 157 | 96 | 4 | 129 | 274 | 5 | 160 | 1.97e-14 | 70.5 |
| MS.gene32143.t1 | MTR_4g055833 | 37.500 | 128 | 74 | 3 | 124 | 245 | 121 | 248 | 3.94e-14 | 72.8 |
| MS.gene32143.t1 | MTR_5g011610 | 28.873 | 142 | 97 | 3 | 129 | 268 | 62 | 201 | 7.00e-14 | 71.6 |
| MS.gene32143.t1 | MTR_6g060670 | 39.640 | 111 | 65 | 2 | 128 | 238 | 180 | 288 | 2.30e-13 | 70.1 |
| MS.gene32143.t1 | MTR_5g011680 | 30.000 | 140 | 90 | 3 | 128 | 260 | 145 | 283 | 2.45e-13 | 69.7 |
| MS.gene32143.t1 | MTR_4g101990 | 41.228 | 114 | 63 | 1 | 128 | 237 | 147 | 260 | 8.80e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32143.t1 | AT4G14465 | 60.333 | 300 | 89 | 7 | 37 | 325 | 1 | 281 | 8.59e-102 | 300 |
| MS.gene32143.t1 | AT3G04570 | 63.180 | 239 | 58 | 5 | 37 | 247 | 1 | 237 | 5.08e-81 | 249 |
| MS.gene32143.t1 | AT1G76500 | 63.636 | 187 | 54 | 4 | 74 | 249 | 49 | 232 | 3.48e-64 | 205 |
| MS.gene32143.t1 | AT2G35270 | 53.247 | 231 | 82 | 5 | 98 | 325 | 78 | 285 | 6.58e-63 | 201 |
| MS.gene32143.t1 | AT2G45430 | 59.735 | 226 | 80 | 6 | 98 | 316 | 89 | 310 | 2.02e-62 | 201 |
| MS.gene32143.t1 | AT2G42940 | 64.935 | 154 | 54 | 0 | 98 | 251 | 53 | 206 | 1.39e-61 | 197 |
| MS.gene32143.t1 | AT4G22810 | 54.772 | 241 | 75 | 5 | 98 | 325 | 105 | 324 | 1.45e-61 | 199 |
| MS.gene32143.t1 | AT3G60870 | 55.838 | 197 | 76 | 3 | 55 | 242 | 7 | 201 | 8.33e-61 | 195 |
| MS.gene32143.t1 | AT4G12050 | 70.968 | 155 | 44 | 1 | 98 | 251 | 118 | 272 | 4.37e-58 | 191 |
| MS.gene32143.t1 | AT5G49700 | 40.942 | 276 | 120 | 9 | 61 | 325 | 33 | 276 | 5.88e-56 | 183 |
| MS.gene32143.t1 | AT4G17800 | 55.340 | 206 | 66 | 2 | 105 | 304 | 89 | 274 | 1.75e-55 | 182 |
| MS.gene32143.t1 | AT3G55560 | 44.776 | 335 | 110 | 12 | 37 | 324 | 1 | 307 | 2.02e-55 | 183 |
| MS.gene32143.t1 | AT4G35390 | 68.667 | 150 | 45 | 1 | 98 | 245 | 63 | 212 | 1.31e-51 | 172 |
| MS.gene32143.t1 | AT1G20900 | 59.788 | 189 | 59 | 2 | 76 | 247 | 56 | 244 | 6.19e-49 | 166 |
| MS.gene32143.t1 | AT1G14490 | 50.610 | 164 | 72 | 3 | 99 | 255 | 25 | 186 | 1.54e-43 | 149 |
| MS.gene32143.t1 | AT1G14490 | 50.610 | 164 | 72 | 3 | 99 | 255 | 6 | 167 | 1.55e-43 | 149 |
| MS.gene32143.t1 | AT4G17950 | 42.069 | 145 | 77 | 3 | 98 | 237 | 196 | 338 | 2.11e-22 | 97.4 |
| MS.gene32143.t1 | AT5G62260 | 37.903 | 124 | 74 | 1 | 125 | 245 | 160 | 283 | 2.20e-22 | 95.5 |
| MS.gene32143.t1 | AT1G63470 | 36.986 | 146 | 85 | 3 | 98 | 237 | 147 | 291 | 2.96e-22 | 96.3 |
| MS.gene32143.t1 | AT2G45850 | 40.132 | 152 | 81 | 4 | 97 | 240 | 131 | 280 | 1.77e-21 | 94.0 |
| MS.gene32143.t1 | AT2G45850 | 40.132 | 152 | 81 | 4 | 97 | 240 | 131 | 280 | 1.77e-21 | 94.0 |
| MS.gene32143.t1 | AT2G33620 | 37.931 | 145 | 86 | 3 | 96 | 237 | 135 | 278 | 2.25e-21 | 93.6 |
| MS.gene32143.t1 | AT2G33620 | 37.931 | 145 | 86 | 3 | 96 | 237 | 135 | 278 | 2.25e-21 | 93.6 |
| MS.gene32143.t1 | AT2G33620 | 37.931 | 145 | 86 | 3 | 96 | 237 | 135 | 278 | 2.25e-21 | 93.6 |
| MS.gene32143.t1 | AT2G33620 | 37.931 | 145 | 86 | 3 | 96 | 237 | 135 | 278 | 2.25e-21 | 93.6 |
| MS.gene32143.t1 | AT4G12080 | 40.171 | 117 | 67 | 1 | 128 | 241 | 173 | 289 | 2.65e-21 | 93.6 |
| MS.gene32143.t1 | AT5G62260 | 38.793 | 116 | 68 | 1 | 125 | 237 | 160 | 275 | 3.15e-21 | 94.0 |
| MS.gene32143.t1 | AT5G62260 | 38.793 | 116 | 68 | 1 | 125 | 237 | 160 | 275 | 3.15e-21 | 94.0 |
| MS.gene32143.t1 | AT4G25320 | 35.849 | 159 | 82 | 3 | 99 | 237 | 123 | 281 | 6.26e-21 | 92.8 |
| MS.gene32143.t1 | AT5G51590 | 39.823 | 113 | 65 | 1 | 128 | 237 | 181 | 293 | 7.41e-21 | 92.8 |
| MS.gene32143.t1 | AT3G04590 | 38.182 | 110 | 68 | 0 | 128 | 237 | 174 | 283 | 2.70e-20 | 91.3 |
| MS.gene32143.t1 | AT3G04590 | 38.182 | 110 | 68 | 0 | 128 | 237 | 174 | 283 | 3.68e-20 | 89.4 |
| MS.gene32143.t1 | AT2G45850 | 39.333 | 150 | 81 | 4 | 97 | 238 | 131 | 278 | 4.25e-20 | 89.0 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 130 | 324 | 7.26e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 130 | 324 | 7.26e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 124 | 318 | 7.28e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 124 | 318 | 7.28e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 124 | 318 | 7.28e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 124 | 318 | 7.28e-17 | 80.9 |
| MS.gene32143.t1 | AT1G63480 | 28.061 | 196 | 123 | 4 | 98 | 276 | 124 | 318 | 7.28e-17 | 80.9 |
| MS.gene32143.t1 | AT5G46640 | 42.759 | 145 | 76 | 3 | 98 | 238 | 155 | 296 | 3.57e-16 | 79.0 |
| MS.gene32143.t1 | AT4G00200 | 39.496 | 119 | 69 | 1 | 128 | 243 | 126 | 244 | 2.73e-15 | 75.9 |
| MS.gene32143.t1 | AT4G00200 | 39.496 | 119 | 69 | 1 | 128 | 243 | 126 | 244 | 2.73e-15 | 75.9 |
| MS.gene32143.t1 | AT4G22770 | 39.167 | 120 | 70 | 1 | 128 | 244 | 153 | 272 | 4.45e-15 | 75.5 |
| MS.gene32143.t1 | AT4G22770 | 39.167 | 120 | 70 | 1 | 128 | 244 | 153 | 272 | 4.45e-15 | 75.5 |
| MS.gene32143.t1 | AT3G61310 | 34.667 | 150 | 92 | 2 | 97 | 240 | 133 | 282 | 1.81e-14 | 73.6 |
Find 110 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTGGTGAGTGGGTTCC+TGG | 0.152889 | 1.2:+56945366 | None:intergenic |
| CCAAATTTGTTGCCTAATAA+TGG | 0.209471 | 1.2:-56944628 | MS.gene32143:CDS |
| CCATTATTAGGCAACAAATT+TGG | 0.219989 | 1.2:+56944628 | None:intergenic |
| ACAATTCAAGGAGGGTTATC+TGG | 0.264024 | 1.2:-56945396 | MS.gene32143:CDS |
| ACATGGCTCTTCAAAGCATT+TGG | 0.272297 | 1.2:+56945159 | None:intergenic |
| GTTACAAAGATGGGTGGTTT+TGG | 0.295281 | 1.2:+56945192 | None:intergenic |
| CTTGCCTGGGCTGCTGCTCA+TGG | 0.299376 | 1.2:-56944583 | MS.gene32143:CDS |
| CCCATCTGCCCTCCATTATT+AGG | 0.325156 | 1.2:+56944616 | None:intergenic |
| AAATACTACAACAGCAGTTC+TGG | 0.340855 | 1.2:-56945433 | MS.gene32143:CDS |
| CCACTCAACTCAACTCAATA+AGG | 0.342276 | 1.2:+56944553 | None:intergenic |
| AGTGTACTTGGCTGGAGGTC+AGG | 0.342488 | 1.2:-56944908 | MS.gene32143:CDS |
| GGTGCTGTTGTAGCACTTCA+TGG | 0.358357 | 1.2:-56945003 | MS.gene32143:CDS |
| CCTGCTCCACCTGGTTCAAC+TGG | 0.364722 | 1.2:-56944937 | MS.gene32143:CDS |
| GATCCAGGTGGTCTTCCTCT+TGG | 0.385010 | 1.2:+56945225 | None:intergenic |
| CATGGCTCTTCAAAGCATTT+GGG | 0.396581 | 1.2:+56945160 | None:intergenic |
| TGGGACATGAGGCTCTTGCC+TGG | 0.399930 | 1.2:-56944597 | MS.gene32143:CDS |
| GTAGTTGGAGGTTGTGTTGT+TGG | 0.411543 | 1.2:-56944880 | MS.gene32143:CDS |
| GGAGGTCAGGGTCAGGTAGT+TGG | 0.413964 | 1.2:-56944895 | MS.gene32143:CDS |
| GTGGTCTTCCTCTTGGTCTT+CGG | 0.414167 | 1.2:+56945232 | None:intergenic |
| TGCAACTGATGACCAATTCC+TGG | 0.414250 | 1.2:+56944697 | None:intergenic |
| GGATCGCCTCCACCAGGAAT+TGG | 0.416217 | 1.2:-56944709 | MS.gene32143:CDS |
| CAATTCAAGGAGGGTTATCT+GGG | 0.426102 | 1.2:-56945395 | MS.gene32143:CDS |
| GTAGCGGCAATAAGCATAAC+AGG | 0.426694 | 1.2:+56944838 | None:intergenic |
| CTACCTGGTCCTGCTCCACC+TGG | 0.426985 | 1.2:-56944946 | MS.gene32143:CDS |
| CGAAACTAACTAACTGTTTG+AGG | 0.434158 | 1.2:+56945957 | None:intergenic |
| GCTATCTCTTGTTACAAAGA+TGG | 0.435101 | 1.2:+56945182 | None:intergenic |
| GTGCAAGGTGGAGGAGCGTC+TGG | 0.440396 | 1.2:-56944733 | MS.gene32143:CDS |
| CTTGGCTGGAGGTCAGGGTC+AGG | 0.442843 | 1.2:-56944902 | MS.gene32143:CDS |
| AACTGGTCTTACAGTGTACT+TGG | 0.444380 | 1.2:-56944920 | MS.gene32143:CDS |
| AGGAATTGGTCATCAGTTGC+AGG | 0.445128 | 1.2:-56944695 | MS.gene32143:CDS |
| CACTTGGTGAGTGGGTTCCT+GGG | 0.452332 | 1.2:+56945367 | None:intergenic |
| TTGGTCATCAGTTGCAGGGT+GGG | 0.456584 | 1.2:-56944690 | MS.gene32143:CDS |
| GCCTAATAATGGAGGGCAGA+TGG | 0.462555 | 1.2:-56944617 | MS.gene32143:CDS |
| AATCCTTGGTGGACAATTCA+AGG | 0.465438 | 1.2:-56945408 | MS.gene32143:CDS |
| GCGGGAGGTGTGCAAGGTGG+AGG | 0.466037 | 1.2:-56944742 | MS.gene32143:CDS |
| TGCACACCTCCCGCAGAACT+AGG | 0.472965 | 1.2:+56944751 | None:intergenic |
| CTATCTCTTGTTACAAAGAT+GGG | 0.474278 | 1.2:+56945183 | None:intergenic |
| GTTGGAACTCTTGTTGCAGT+TGG | 0.481874 | 1.2:-56944862 | MS.gene32143:CDS |
| AAAGGCATGGAAGAAGGATC+TGG | 0.482278 | 1.2:+56944664 | None:intergenic |
| CTGTTGTAGCACTTCATGGT+AGG | 0.488288 | 1.2:-56944999 | MS.gene32143:CDS |
| GTGTACTTGGCTGGAGGTCA+GGG | 0.493209 | 1.2:-56944907 | MS.gene32143:CDS |
| CCAGTTGAACCAGGTGGAGC+AGG | 0.497778 | 1.2:+56944937 | None:intergenic |
| GGGACATGAGGCTCTTGCCT+GGG | 0.498915 | 1.2:-56944596 | MS.gene32143:CDS |
| TTCTGCTATATCAGCTCCAC+CGG | 0.501001 | 1.2:+56945125 | None:intergenic |
| CCTAATAATGGAGGGCAGAT+GGG | 0.501432 | 1.2:-56944616 | MS.gene32143:CDS |
| GTTTAAACCACTTGGTGAGT+GGG | 0.503662 | 1.2:+56945359 | None:intergenic |
| ACTTCAACTGCACCTTCTCT+AGG | 0.505701 | 1.2:+56945261 | None:intergenic |
| AGGTAGAAAAGTCCCGGTTA+AGG | 0.506619 | 1.2:+56944963 | None:intergenic |
| GATGATAATGATAATAATGA+AGG | 0.507615 | 1.2:-56944775 | MS.gene32143:CDS |
| TCTTCCATGAGCAGCAGCCC+AGG | 0.509624 | 1.2:+56944579 | None:intergenic |
| GGTCAGGGTCAGGTAGTTGG+AGG | 0.515248 | 1.2:-56944892 | MS.gene32143:CDS |
| CAGCAGTTCTGGCTAATCCT+TGG | 0.516441 | 1.2:-56945422 | MS.gene32143:CDS |
| CTTAGACAACCTTCAGCTCC+TGG | 0.520193 | 1.2:-56945024 | MS.gene32143:CDS |
| TTATTAGGCAACAAATTTGG+TGG | 0.521583 | 1.2:+56944631 | None:intergenic |
| TTATACAAAGGCATGGAAGA+AGG | 0.526106 | 1.2:+56944658 | None:intergenic |
| AGTTCTGCGGGAGGTGTGCA+AGG | 0.529790 | 1.2:-56944748 | MS.gene32143:CDS |
| GGTCTTACAGTGTACTTGGC+TGG | 0.537231 | 1.2:-56944916 | MS.gene32143:CDS |
| TGTTTAAACCACTTGGTGAG+TGG | 0.539187 | 1.2:+56945358 | None:intergenic |
| GAACCAGGTGGAGCAGGACC+AGG | 0.539279 | 1.2:+56944943 | None:intergenic |
| AATGAAGGGCCTAGTTCTGC+GGG | 0.541187 | 1.2:-56944760 | MS.gene32143:CDS |
| CAGTTCTGGCTAATCCTTGG+TGG | 0.541662 | 1.2:-56945419 | MS.gene32143:CDS |
| AGAGAAGGTGCAGTTGAAGT+TGG | 0.547259 | 1.2:-56945258 | MS.gene32143:CDS |
| TGCTTTGAAGAGCCATGTCA+TGG | 0.550949 | 1.2:-56945154 | MS.gene32143:CDS |
| TGGTGTTTGTTTAAACCACT+TGG | 0.552489 | 1.2:+56945351 | None:intergenic |
| GTTTGTGTTCTCAGTGGAAG+TGG | 0.555754 | 1.2:-56945066 | MS.gene32143:CDS |
| AATTTGTTGCCTAATAATGG+AGG | 0.564310 | 1.2:-56944625 | MS.gene32143:CDS |
| GTGTGGCACAATTCGCAAGA+AGG | 0.565025 | 1.2:-56945101 | MS.gene32143:CDS |
| TCTGGTGGATCGCCTCCACC+AGG | 0.566478 | 1.2:-56944715 | MS.gene32143:CDS |
| AGCCATGTCATGGAGGTAGC+CGG | 0.569908 | 1.2:-56945144 | MS.gene32143:CDS |
| GGGTTATCTGGGGTTGACCC+AGG | 0.573460 | 1.2:-56945384 | MS.gene32143:CDS |
| TGATTGTTAGGTTTATGTTG+TGG | 0.574804 | 1.2:+56945331 | None:intergenic |
| ACAATCATCAGAGATGGTGA+TGG | 0.574805 | 1.2:-56946802 | None:intergenic |
| CGCGGTGTTTGTGTTCTCAG+TGG | 0.579327 | 1.2:-56945072 | MS.gene32143:CDS |
| TCATTATCATCGTCATCAAG+TGG | 0.580583 | 1.2:+56944787 | None:intergenic |
| TGATGACCAATTCCTGGTGG+AGG | 0.582864 | 1.2:+56944703 | None:intergenic |
| AGACCAAGAGGAAGACCACC+TGG | 0.587335 | 1.2:-56945228 | MS.gene32143:CDS |
| AGGACCAGGTAGAAAAGTCC+CGG | 0.591266 | 1.2:+56944957 | None:intergenic |
| TGGCAAATTATACAAAGGCA+TGG | 0.593563 | 1.2:+56944651 | None:intergenic |
| TGGAGGGCAGATGGGACATG+AGG | 0.594853 | 1.2:-56944608 | MS.gene32143:CDS |
| TTTGGTGGCAAATTATACAA+AGG | 0.596262 | 1.2:+56944646 | None:intergenic |
| ACAACAGCACCAGGAGCTGA+AGG | 0.601528 | 1.2:+56945015 | None:intergenic |
| CACCGGCTACCTCCATGACA+TGG | 0.602203 | 1.2:+56945142 | None:intergenic |
| TGAAGTGCTACAACAGCACC+AGG | 0.605157 | 1.2:+56945006 | None:intergenic |
| ATGATAATGATAATAATGAA+GGG | 0.605731 | 1.2:-56944774 | MS.gene32143:CDS |
| TAATGAAGGGCCTAGTTCTG+CGG | 0.608825 | 1.2:-56944761 | MS.gene32143:CDS |
| ACTGTAAGACCAGTTGAACC+AGG | 0.610431 | 1.2:+56944928 | None:intergenic |
| ATTTGTTGCCTAATAATGGA+GGG | 0.617852 | 1.2:-56944624 | MS.gene32143:CDS |
| TCTCTTGTTACAAAGATGGG+TGG | 0.617894 | 1.2:+56945186 | None:intergenic |
| CAAGGTGGAGGAGCGTCTGG+TGG | 0.620899 | 1.2:-56944730 | MS.gene32143:CDS |
| GGAATTGGTCATCAGTTGCA+GGG | 0.626929 | 1.2:-56944694 | MS.gene32143:CDS |
| CTTGGTGGACAATTCAAGGA+GGG | 0.630959 | 1.2:-56945404 | MS.gene32143:CDS |
| AACTAACTAACTGTTTGAGG+AGG | 0.636723 | 1.2:+56945960 | None:intergenic |
| AGCTGATATAGCAGAAAGTG+TGG | 0.642948 | 1.2:-56945118 | MS.gene32143:CDS |
| TCTGCGGGAGGTGTGCAAGG+TGG | 0.650042 | 1.2:-56944745 | MS.gene32143:CDS |
| CTTACAGTGTACTTGGCTGG+AGG | 0.650202 | 1.2:-56944913 | MS.gene32143:CDS |
| ATTGGTCATCAGTTGCAGGG+TGG | 0.653304 | 1.2:-56944691 | MS.gene32143:CDS |
| AACAGAGATGAACCTAGAGA+AGG | 0.663205 | 1.2:-56945273 | MS.gene32143:CDS |
| GTTGGTAACCGAAGACCAAG+AGG | 0.671648 | 1.2:-56945240 | MS.gene32143:CDS |
| CTCAACTCAACTCAATAAGG+TGG | 0.676109 | 1.2:+56944556 | None:intergenic |
| CCAGGAACCCACTCACCAAG+TGG | 0.676419 | 1.2:-56945366 | MS.gene32143:CDS |
| GAAGGGCCTAGTTCTGCGGG+AGG | 0.678628 | 1.2:-56944757 | MS.gene32143:CDS |
| AACTGATGACCAATTCCTGG+TGG | 0.683488 | 1.2:+56944700 | None:intergenic |
| CCTCCTTGAATTGTCCACCA+AGG | 0.691826 | 1.2:+56945405 | None:intergenic |
| CATGTCATGGAGGTAGCCGG+TGG | 0.697813 | 1.2:-56945141 | MS.gene32143:CDS |
| AGTAGCATTAGTAAACGTAG+CGG | 0.707477 | 1.2:+56944822 | None:intergenic |
| AATTCAAGGAGGGTTATCTG+GGG | 0.712203 | 1.2:-56945394 | MS.gene32143:CDS |
| CCTTGGTGGACAATTCAAGG+AGG | 0.716947 | 1.2:-56945405 | MS.gene32143:CDS |
| TTTGAAGAGCCATGTCATGG+AGG | 0.719459 | 1.2:-56945151 | MS.gene32143:CDS |
| GTAAGACCAGTTGAACCAGG+TGG | 0.729065 | 1.2:+56944931 | None:intergenic |
| TTCGCAAGAAGGCGTCAACG+CGG | 0.746882 | 1.2:-56945090 | MS.gene32143:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAACAAACAAATAAA+TGG | - | chr1.2:56945563-56945582 | MS.gene32143:intron | 15.0% |
| !! | GAATAAACAAACAAATAAAT+GGG | - | chr1.2:56945564-56945583 | MS.gene32143:intron | 15.0% |
| !! | TATTTGTTTGTTTATTCTAT+TGG | + | chr1.2:56945561-56945580 | None:intergenic | 15.0% |
| !! | TTGTCAAAATATATTGAATT+AGG | - | chr1.2:56945099-56945118 | MS.gene32143:CDS | 15.0% |
| !!! | ATGAAATGAATCAATTATTT+TGG | - | chr1.2:56945197-56945216 | MS.gene32143:CDS | 15.0% |
| !!! | ATGATAATGATAATAATGAA+GGG | - | chr1.2:56946582-56946601 | MS.gene32143:intron | 15.0% |
| !!! | TGAAATGAATCAATTATTTT+GGG | - | chr1.2:56945198-56945217 | MS.gene32143:CDS | 15.0% |
| !! | TAATATGAAGAACAAAAACA+CGG | - | chr1.2:56944654-56944673 | MS.gene32143:CDS | 20.0% |
| !!! | GATGATAATGATAATAATGA+AGG | - | chr1.2:56946581-56946600 | MS.gene32143:intron | 20.0% |
| !!! | TGTTTTCTTACTTACTTTAT+TGG | + | chr1.2:56945283-56945302 | None:intergenic | 20.0% |
| ! | AAGTTATTATGGGACAAAAA+GGG | - | chr1.2:56945239-56945258 | MS.gene32143:CDS | 25.0% |
| ! | AGCTGAAAAAAGAAACAAAA+GGG | + | chr1.2:56945759-56945778 | None:intergenic | 25.0% |
| ! | GCAAAAATCTCAGTTATTAT+AGG | + | chr1.2:56945018-56945037 | None:intergenic | 25.0% |
| ! | GCAAATGACTAAGTTATTAT+GGG | - | chr1.2:56945229-56945248 | MS.gene32143:CDS | 25.0% |
| ! | TAAGTTATTATGGGACAAAA+AGG | - | chr1.2:56945238-56945257 | MS.gene32143:CDS | 25.0% |
| ! | TGCAAATGACTAAGTTATTA+TGG | - | chr1.2:56945228-56945247 | MS.gene32143:CDS | 25.0% |
| ! | TTTGTGATGTATGAGATATA+TGG | + | chr1.2:56945812-56945831 | None:intergenic | 25.0% |
| !! | TACTCAAAATGATGATGATA+GGG | + | chr1.2:56945689-56945708 | None:intergenic | 25.0% |
| !! | TTACTCAAAATGATGATGAT+AGG | + | chr1.2:56945690-56945709 | None:intergenic | 25.0% |
| AGTGAATTAGATGCAATTAC+TGG | + | chr1.2:56945641-56945660 | None:intergenic | 30.0% | |
| CAAAACTAATCAAGCTCAAT+TGG | - | chr1.2:56945849-56945868 | MS.gene32143:intron | 30.0% | |
| CATAACTTCATATACACAAG+TGG | - | chr1.2:56944863-56944882 | MS.gene32143:CDS | 30.0% | |
| CCATTATTAGGCAACAAATT+TGG | + | chr1.2:56946731-56946750 | None:intergenic | 30.0% | |
| CTATCTCTTGTTACAAAGAT+GGG | + | chr1.2:56946176-56946195 | None:intergenic | 30.0% | |
| GAGCTGAAAAAAGAAACAAA+AGG | + | chr1.2:56945760-56945779 | None:intergenic | 30.0% | |
| GTGGCATGTAAAAAAATCAA+AGG | + | chr1.2:56944802-56944821 | None:intergenic | 30.0% | |
| TGATTGTTAGGTTTATGTTG+TGG | + | chr1.2:56946028-56946047 | None:intergenic | 30.0% | |
| TGTTTGAGGAGGAAAAATTA+TGG | + | chr1.2:56945388-56945407 | None:intergenic | 30.0% | |
| TTATTAGGCAACAAATTTGG+TGG | + | chr1.2:56946728-56946747 | None:intergenic | 30.0% | |
| ! | AAATGATGATGATAGGGTAA+AGG | + | chr1.2:56945683-56945702 | None:intergenic | 30.0% |
| ! | ATGAACTACATGATCTCTTT+TGG | - | chr1.2:56944590-56944609 | MS.gene32143:CDS | 30.0% |
| ! | ATTTGTTGCCTAATAATGGA+GGG | - | chr1.2:56946732-56946751 | MS.gene32143:intron | 30.0% |
| ! | TTTGGTGGCAAATTATACAA+AGG | + | chr1.2:56946713-56946732 | None:intergenic | 30.0% |
| !! | AATTTGTTGCCTAATAATGG+AGG | - | chr1.2:56946731-56946750 | MS.gene32143:intron | 30.0% |
| !! | CCAAATTTGTTGCCTAATAA+TGG | - | chr1.2:56946728-56946747 | MS.gene32143:intron | 30.0% |
| !! | CGTGATTTTCATTGATTGTT+AGG | + | chr1.2:56946040-56946059 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTGTCCTTAAC+CGG | - | chr1.2:56946380-56946399 | MS.gene32143:intron | 30.0% |
| AAATACTACAACAGCAGTTC+TGG | - | chr1.2:56945923-56945942 | MS.gene32143:intron | 35.0% | |
| AACTAACTAACTGTTTGAGG+AGG | + | chr1.2:56945399-56945418 | None:intergenic | 35.0% | |
| AATGAGAGAAACTTTGCACT+AGG | + | chr1.2:56944906-56944925 | None:intergenic | 35.0% | |
| ACTGGATGAGAATCAAGTAA+AGG | + | chr1.2:56945623-56945642 | None:intergenic | 35.0% | |
| ACTTGTCATACATCTAAGCA+AGG | - | chr1.2:56944820-56944839 | MS.gene32143:CDS | 35.0% | |
| AGTAGCATTAGTAAACGTAG+CGG | + | chr1.2:56946537-56946556 | None:intergenic | 35.0% | |
| CGAAACTAACTAACTGTTTG+AGG | + | chr1.2:56945402-56945421 | None:intergenic | 35.0% | |
| CTGGATGAGAATCAAGTAAA+GGG | + | chr1.2:56945622-56945641 | None:intergenic | 35.0% | |
| CTTGTCATACATCTAAGCAA+GGG | - | chr1.2:56944821-56944840 | MS.gene32143:CDS | 35.0% | |
| GCTATCTCTTGTTACAAAGA+TGG | + | chr1.2:56946177-56946196 | None:intergenic | 35.0% | |
| TATGAAGAACAAAAACACGG+TGG | - | chr1.2:56944657-56944676 | MS.gene32143:CDS | 35.0% | |
| TCATTATCATCGTCATCAAG+TGG | + | chr1.2:56946572-56946591 | None:intergenic | 35.0% | |
| TGGCAAATTATACAAAGGCA+TGG | + | chr1.2:56946708-56946727 | None:intergenic | 35.0% | |
| TGGTGTTTGTTTAAACCACT+TGG | + | chr1.2:56946008-56946027 | None:intergenic | 35.0% | |
| TTGCTTAGATGTATGACAAG+TGG | + | chr1.2:56944821-56944840 | None:intergenic | 35.0% | |
| ! | AGCTGTATTGTTGTTGACAT+GGG | + | chr1.2:56945319-56945338 | None:intergenic | 35.0% |
| ! | AGTTGAGTCTTTGAAAGGTT+TGG | - | chr1.2:56945516-56945535 | MS.gene32143:intron | 35.0% |
| ! | TTATACAAAGGCATGGAAGA+AGG | + | chr1.2:56946701-56946720 | None:intergenic | 35.0% |
| ! | TTGAGATTTTGTCCTTAACC+GGG | - | chr1.2:56946381-56946400 | MS.gene32143:intron | 35.0% |
| !! | ACTTGAGTTGAGTCTTTGAA+AGG | - | chr1.2:56945511-56945530 | MS.gene32143:intron | 35.0% |
| AACAGAGATGAACCTAGAGA+AGG | - | chr1.2:56946083-56946102 | MS.gene32143:intron | 40.0% | |
| AATTCAAGGAGGGTTATCTG+GGG | - | chr1.2:56945962-56945981 | MS.gene32143:intron | 40.0% | |
| ACAATTCAAGGAGGGTTATC+TGG | - | chr1.2:56945960-56945979 | MS.gene32143:intron | 40.0% | |
| AGCTGATATAGCAGAAAGTG+TGG | - | chr1.2:56946238-56946257 | MS.gene32143:intron | 40.0% | |
| CAATTCAAGGAGGGTTATCT+GGG | - | chr1.2:56945961-56945980 | MS.gene32143:intron | 40.0% | |
| GTGAGTGAGCATCTTATGTT+AGG | - | chr1.2:56945714-56945733 | MS.gene32143:intron | 40.0% | |
| TCTCTTGTTACAAAGATGGG+TGG | + | chr1.2:56946173-56946192 | None:intergenic | 40.0% | |
| TGATAGGGTAAAGGAAAGTG+AGG | + | chr1.2:56945674-56945693 | None:intergenic | 40.0% | |
| ! | AATCCTTGGTGGACAATTCA+AGG | - | chr1.2:56945948-56945967 | MS.gene32143:intron | 40.0% |
| ! | ACATGGCTCTTCAAAGCATT+TGG | + | chr1.2:56946200-56946219 | None:intergenic | 40.0% |
| ! | CATGGCTCTTCAAAGCATTT+GGG | + | chr1.2:56946199-56946218 | None:intergenic | 40.0% |
| ! | GAGCTGTATTGTTGTTGACA+TGG | + | chr1.2:56945320-56945339 | None:intergenic | 40.0% |
| ! | GCTGTATTGTTGTTGACATG+GGG | + | chr1.2:56945318-56945337 | None:intergenic | 40.0% |
| ! | GTTACAAAGATGGGTGGTTT+TGG | + | chr1.2:56946167-56946186 | None:intergenic | 40.0% |
| ! | GTTTAAACCACTTGGTGAGT+GGG | + | chr1.2:56946000-56946019 | None:intergenic | 40.0% |
| ! | TGTTTAAACCACTTGGTGAG+TGG | + | chr1.2:56946001-56946020 | None:intergenic | 40.0% |
| !! | AACTGGTCTTACAGTGTACT+TGG | - | chr1.2:56946436-56946455 | MS.gene32143:intron | 40.0% |
| !!! | TTTGGTCTGTTTTTGGATCC+AGG | + | chr1.2:56946149-56946168 | None:intergenic | 40.0% |
| AAAACGTGAGAGGGAGAAGA+AGG | - | chr1.2:56944739-56944758 | MS.gene32143:CDS | 45.0% | |
| AAACGTGAGAGGGAGAAGAA+GGG | - | chr1.2:56944740-56944759 | MS.gene32143:CDS | 45.0% | |
| AACTGATGACCAATTCCTGG+TGG | + | chr1.2:56946659-56946678 | None:intergenic | 45.0% | |
| ACTGTAAGACCAGTTGAACC+AGG | + | chr1.2:56946431-56946450 | None:intergenic | 45.0% | |
| ACTTCAACTGCACCTTCTCT+AGG | + | chr1.2:56946098-56946117 | None:intergenic | 45.0% | |
| AGAAGAAGGGGAACAGTGAA+AGG | - | chr1.2:56944753-56944772 | MS.gene32143:CDS | 45.0% | |
| AGGAATTGGTCATCAGTTGC+AGG | - | chr1.2:56946661-56946680 | MS.gene32143:intron | 45.0% | |
| AGGTAGAAAAGTCCCGGTTA+AGG | + | chr1.2:56946396-56946415 | None:intergenic | 45.0% | |
| CTGTTGTAGCACTTCATGGT+AGG | - | chr1.2:56946357-56946376 | MS.gene32143:intron | 45.0% | |
| GAAGAACAAAAACACGGTGG+TGG | - | chr1.2:56944660-56944679 | MS.gene32143:CDS | 45.0% | |
| GGAATTGGTCATCAGTTGCA+GGG | - | chr1.2:56946662-56946681 | MS.gene32143:intron | 45.0% | |
| GTAGCGGCAATAAGCATAAC+AGG | + | chr1.2:56946521-56946540 | None:intergenic | 45.0% | |
| GTAGTTGGAGGTTGTGTTGT+TGG | - | chr1.2:56946476-56946495 | MS.gene32143:intron | 45.0% | |
| GTTGGAACTCTTGTTGCAGT+TGG | - | chr1.2:56946494-56946513 | MS.gene32143:intron | 45.0% | |
| GTTTGTGTTCTCAGTGGAAG+TGG | - | chr1.2:56946290-56946309 | MS.gene32143:intron | 45.0% | |
| TAAGCAAGGGACTCAGAAAC+TGG | - | chr1.2:56944834-56944853 | MS.gene32143:CDS | 45.0% | |
| TGCAACTGATGACCAATTCC+TGG | + | chr1.2:56946662-56946681 | None:intergenic | 45.0% | |
| TTCTGCTATATCAGCTCCAC+CGG | + | chr1.2:56946234-56946253 | None:intergenic | 45.0% | |
| TTTGAAGAGCCATGTCATGG+AGG | - | chr1.2:56946205-56946224 | MS.gene32143:intron | 45.0% | |
| ! | AAAGGCATGGAAGAAGGATC+TGG | + | chr1.2:56946695-56946714 | None:intergenic | 45.0% |
| ! | AGAGAAGGTGCAGTTGAAGT+TGG | - | chr1.2:56946098-56946117 | MS.gene32143:intron | 45.0% |
| ! | CCTAATAATGGAGGGCAGAT+GGG | - | chr1.2:56946740-56946759 | MS.gene32143:intron | 45.0% |
| ! | CTTGGTGGACAATTCAAGGA+GGG | - | chr1.2:56945952-56945971 | MS.gene32143:intron | 45.0% |
| ! | TTAACCGGGACTTTTCTACC+TGG | - | chr1.2:56946395-56946414 | MS.gene32143:intron | 45.0% |
| !! | AAAAACACGGTGGTGGATCA+CGG | - | chr1.2:56944667-56944686 | MS.gene32143:CDS | 45.0% |
| !! | TAATGAAGGGCCTAGTTCTG+CGG | - | chr1.2:56946595-56946614 | MS.gene32143:intron | 45.0% |
| !! | TGCTTTGAAGAGCCATGTCA+TGG | - | chr1.2:56946202-56946221 | MS.gene32143:intron | 45.0% |
| !!! | GGGTGGTTTTGGTCTGTTTT+TGG | + | chr1.2:56946156-56946175 | None:intergenic | 45.0% |
| AACGTGAGAGGGAGAAGAAG+GGG | - | chr1.2:56944741-56944760 | MS.gene32143:CDS | 50.0% | |
| AGGACCAGGTAGAAAAGTCC+CGG | + | chr1.2:56946402-56946421 | None:intergenic | 50.0% | |
| AGGGAAGCAGAAAACGTGAG+AGG | - | chr1.2:56944729-56944748 | MS.gene32143:CDS | 50.0% | |
| ATTGGTCATCAGTTGCAGGG+TGG | - | chr1.2:56946665-56946684 | MS.gene32143:intron | 50.0% | |
| CCCATCTGCCCTCCATTATT+AGG | + | chr1.2:56946743-56946762 | None:intergenic | 50.0% | |
| CCTCCTTGAATTGTCCACCA+AGG | + | chr1.2:56945954-56945973 | None:intergenic | 50.0% | |
| CTTACAGTGTACTTGGCTGG+AGG | - | chr1.2:56946443-56946462 | MS.gene32143:intron | 50.0% | |
| CTTAGACAACCTTCAGCTCC+TGG | - | chr1.2:56946332-56946351 | MS.gene32143:intron | 50.0% | |
| GGGAAGCAGAAAACGTGAGA+GGG | - | chr1.2:56944730-56944749 | MS.gene32143:CDS | 50.0% | |
| GGTCTTACAGTGTACTTGGC+TGG | - | chr1.2:56946440-56946459 | MS.gene32143:intron | 50.0% | |
| GTAAGACCAGTTGAACCAGG+TGG | + | chr1.2:56946428-56946447 | None:intergenic | 50.0% | |
| GTGTGGCACAATTCGCAAGA+AGG | - | chr1.2:56946255-56946274 | MS.gene32143:intron | 50.0% | |
| TGATGACCAATTCCTGGTGG+AGG | + | chr1.2:56946656-56946675 | None:intergenic | 50.0% | |
| TTGGTCATCAGTTGCAGGGT+GGG | - | chr1.2:56946666-56946685 | MS.gene32143:intron | 50.0% | |
| ! | CAGCAGTTCTGGCTAATCCT+TGG | - | chr1.2:56945934-56945953 | MS.gene32143:intron | 50.0% |
| ! | CAGTTCTGGCTAATCCTTGG+TGG | - | chr1.2:56945937-56945956 | MS.gene32143:intron | 50.0% |
| ! | CCTTGGTGGACAATTCAAGG+AGG | - | chr1.2:56945951-56945970 | MS.gene32143:intron | 50.0% |
| ! | GCCTAATAATGGAGGGCAGA+TGG | - | chr1.2:56946739-56946758 | MS.gene32143:intron | 50.0% |
| ! | GTGGTCTTCCTCTTGGTCTT+CGG | + | chr1.2:56946127-56946146 | None:intergenic | 50.0% |
| ! | TGAAGTGCTACAACAGCACC+AGG | + | chr1.2:56946353-56946372 | None:intergenic | 50.0% |
| !! | AATGAAGGGCCTAGTTCTGC+GGG | - | chr1.2:56946596-56946615 | MS.gene32143:intron | 50.0% |
| !! | GGTGCTGTTGTAGCACTTCA+TGG | - | chr1.2:56946353-56946372 | MS.gene32143:intron | 50.0% |
| !! | GTTGGTAACCGAAGACCAAG+AGG | - | chr1.2:56946116-56946135 | MS.gene32143:intron | 50.0% |
| !!! | GGTCTGTTTTTGGATCCAGG+TGG | + | chr1.2:56946146-56946165 | None:intergenic | 50.0% |
| ACAACAGCACCAGGAGCTGA+AGG | + | chr1.2:56946344-56946363 | None:intergenic | 55.0% | |
| AGACCAAGAGGAAGACCACC+TGG | - | chr1.2:56946128-56946147 | MS.gene32143:intron | 55.0% | |
| AGCCATGTCATGGAGGTAGC+CGG | - | chr1.2:56946212-56946231 | MS.gene32143:intron | 55.0% | |
| AGTGTACTTGGCTGGAGGTC+AGG | - | chr1.2:56946448-56946467 | MS.gene32143:intron | 55.0% | |
| CGCGGTGTTTGTGTTCTCAG+TGG | - | chr1.2:56946284-56946303 | MS.gene32143:intron | 55.0% | |
| GATCCAGGTGGTCTTCCTCT+TGG | + | chr1.2:56946134-56946153 | None:intergenic | 55.0% | |
| GTGTACTTGGCTGGAGGTCA+GGG | - | chr1.2:56946449-56946468 | MS.gene32143:intron | 55.0% | |
| ! | CACTTGGTGAGTGGGTTCCT+GGG | + | chr1.2:56945992-56946011 | None:intergenic | 55.0% |
| ! | CGTTTTCTGCTTCCCTCCTG+CGG | + | chr1.2:56944725-56944744 | None:intergenic | 55.0% |
| !! | TTCGCAAGAAGGCGTCAACG+CGG | - | chr1.2:56946266-56946285 | MS.gene32143:intron | 55.0% |
| CATGTCATGGAGGTAGCCGG+TGG | - | chr1.2:56946215-56946234 | MS.gene32143:intron | 60.0% | |
| CCAGGAACCCACTCACCAAG+TGG | - | chr1.2:56945990-56946009 | MS.gene32143:CDS | 60.0% | |
| CCAGTTGAACCAGGTGGAGC+AGG | + | chr1.2:56946422-56946441 | None:intergenic | 60.0% | |
| CCTGCTCCACCTGGTTCAAC+TGG | - | chr1.2:56946419-56946438 | MS.gene32143:intron | 60.0% | |
| GGAGGTCAGGGTCAGGTAGT+TGG | - | chr1.2:56946461-56946480 | MS.gene32143:intron | 60.0% | |
| GGATCGCCTCCACCAGGAAT+TGG | - | chr1.2:56946647-56946666 | MS.gene32143:intron | 60.0% | |
| GGGACATGAGGCTCTTGCCT+GGG | - | chr1.2:56946760-56946779 | MS.gene32143:intron | 60.0% | |
| GGTCAGGGTCAGGTAGTTGG+AGG | - | chr1.2:56946464-56946483 | MS.gene32143:intron | 60.0% | |
| TCTTCCATGAGCAGCAGCCC+AGG | + | chr1.2:56946780-56946799 | None:intergenic | 60.0% | |
| TGCACACCTCCCGCAGAACT+AGG | + | chr1.2:56946608-56946627 | None:intergenic | 60.0% | |
| TGGAGGGCAGATGGGACATG+AGG | - | chr1.2:56946748-56946767 | MS.gene32143:intron | 60.0% | |
| TGGGACATGAGGCTCTTGCC+TGG | - | chr1.2:56946759-56946778 | MS.gene32143:intron | 60.0% | |
| ! | AGTTCTGCGGGAGGTGTGCA+AGG | - | chr1.2:56946608-56946627 | MS.gene32143:intron | 60.0% |
| ! | CACCGGCTACCTCCATGACA+TGG | + | chr1.2:56946217-56946236 | None:intergenic | 60.0% |
| ! | CCACTTGGTGAGTGGGTTCC+TGG | + | chr1.2:56945993-56946012 | None:intergenic | 60.0% |
| ! | GGGTTATCTGGGGTTGACCC+AGG | - | chr1.2:56945972-56945991 | MS.gene32143:CDS | 60.0% |
| !! | AACACGGTGGTGGATCACGG+CGG | - | chr1.2:56944670-56944689 | MS.gene32143:CDS | 60.0% |
| CTACCTGGTCCTGCTCCACC+TGG | - | chr1.2:56946410-56946429 | MS.gene32143:intron | 65.0% | |
| CTTGCCTGGGCTGCTGCTCA+TGG | - | chr1.2:56946773-56946792 | MS.gene32143:intron | 65.0% | |
| CTTGGCTGGAGGTCAGGGTC+AGG | - | chr1.2:56946454-56946473 | MS.gene32143:intron | 65.0% | |
| GAACCAGGTGGAGCAGGACC+AGG | + | chr1.2:56946416-56946435 | None:intergenic | 65.0% | |
| GCAGCGCTTAAGCCGCAGGA+GGG | - | chr1.2:56944710-56944729 | MS.gene32143:CDS | 65.0% | |
| GGCGGAGGGACTGACCTTCA+CGG | - | chr1.2:56944688-56944707 | MS.gene32143:CDS | 65.0% | |
| ! | CGGCTTAAGCGCTGCCGTGA+AGG | + | chr1.2:56944705-56944724 | None:intergenic | 65.0% |
| ! | TCTGCGGGAGGTGTGCAAGG+TGG | - | chr1.2:56946611-56946630 | MS.gene32143:intron | 65.0% |
| ! | TCTGGTGGATCGCCTCCACC+AGG | - | chr1.2:56946641-56946660 | MS.gene32143:intron | 65.0% |
| !! | CAAGGTGGAGGAGCGTCTGG+TGG | - | chr1.2:56946626-56946645 | MS.gene32143:intron | 65.0% |
| !! | GAAGGGCCTAGTTCTGCGGG+AGG | - | chr1.2:56946599-56946618 | MS.gene32143:intron | 65.0% |
| !! | GTGCAAGGTGGAGGAGCGTC+TGG | - | chr1.2:56946623-56946642 | MS.gene32143:intron | 65.0% |
| CACGGCAGCGCTTAAGCCGC+AGG | - | chr1.2:56944706-56944725 | MS.gene32143:CDS | 70.0% | |
| GGCAGCGCTTAAGCCGCAGG+AGG | - | chr1.2:56944709-56944728 | MS.gene32143:CDS | 70.0% | |
| ! | GCGGGAGGTGTGCAAGGTGG+AGG | - | chr1.2:56946614-56946633 | MS.gene32143:intron | 70.0% |
| !! | ACGGTGGTGGATCACGGCGG+AGG | - | chr1.2:56944673-56944692 | MS.gene32143:CDS | 70.0% |
| !! | CGGTGGTGGATCACGGCGGA+GGG | - | chr1.2:56944674-56944693 | MS.gene32143:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 56944567 | 56946811 | 56944567 | ID=MS.gene32143 |
| chr1.2 | mRNA | 56944567 | 56946811 | 56944567 | ID=MS.gene32143.t1;Parent=MS.gene32143 |
| chr1.2 | exon | 56946799 | 56946811 | 56946799 | ID=MS.gene32143.t1.exon1;Parent=MS.gene32143.t1 |
| chr1.2 | CDS | 56946799 | 56946811 | 56946799 | ID=cds.MS.gene32143.t1;Parent=MS.gene32143.t1 |
| chr1.2 | exon | 56945971 | 56946041 | 56945971 | ID=MS.gene32143.t1.exon2;Parent=MS.gene32143.t1 |
| chr1.2 | CDS | 56945971 | 56946041 | 56945971 | ID=cds.MS.gene32143.t1;Parent=MS.gene32143.t1 |
| chr1.2 | exon | 56944567 | 56945460 | 56944567 | ID=MS.gene32143.t1.exon3;Parent=MS.gene32143.t1 |
| chr1.2 | CDS | 56944567 | 56945460 | 56944567 | ID=cds.MS.gene32143.t1;Parent=MS.gene32143.t1 |
| Gene Sequence |
| Protein sequence |
